Zingiber officinale (ginger): 121982343
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Entry
121982343 CDS
T08725
Name
(RefSeq) chaperone protein ClpB1-like
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
zof03110
]
121982343
Chaperones and folding catalysts [BR:
zof03110
]
Heat shock proteins
HSP100
121982343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
Clp_N
AAA_22
AAA_16
Sigma54_activat
AAA_18
bpMoxR
AAA_14
AAA_7
nSTAND3
NACHT
IstB_IS21
AAA_28
RuvB_N
TsaE
ATPase_2
RNA_helicase
TniB
ResIII
AAA_25
Zeta_toxin
DUF815
NBD_SMAX1
AAA_19
Mg_chelatase
ABC_tran
Torsin
T2SSE
DNA_pol3_delta2
DUF2987
DUF87
Motif
Other DBs
NCBI-GeneID:
121982343
NCBI-ProteinID:
XP_042391296
LinkDB
All DBs
Position
5A:147482415..147485999
Genome browser
AA seq
918 aa
AA seq
DB search
MNPDKFTHKTNEALVSARELALDSGHAQFTPLHLASVLVADRQGLLPQALANASGGDGNS
VVQSFERVVSSALKKLPSQSPPPDDAPVATSLVKAIRRAQSSQKSRGDSHLAVDQLILGL
LEDSQIADLLKEAGISAARVRAEVEKLRGKEGKKVESASGDTNFQALKTYGRDLVEVAGK
LDPVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIARGDVPSNLFDVH
LVALDMGALIAGAKYRGEFEERVKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA
NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADSISILRGLKEK
FEGHHGVRILDRAIVVAAQLSHRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE
RKRIQLEVELHALEKEKDKASKARLVEVKKELDDLRDKLQPLMMKYRKEKERIDEIRKLK
QRREELLIAMQEAERRGNLPRVADIKFGALQEIDVAIAKLEGDANENLMLTETVGPEHIA
EVVSRWTGIPVTRLGQNEKARLIGLAERLHKRVVGQNQAVDAVAEAVLRSRAGLGRPQQP
TGSFLFLGPTGVGKTELAKALAEQLFDDENLLIRIDMSEYMEQHSVARLIGAPPGYVGHE
EGGQLTEAVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFTNSVIIMT
SNLGAEHLLAGMVGESSLQIARERVMLEVRKHFRPELLNRLDEIVIFDPLAHDQLRKVAR
LQMKDIARRLAERGIALAITDAALDVVLSESYDPIYGARPIRRWLEKKVVTHMSKMLIQG
EIDENSTVYIDAVPGKKELSYKVEKNGGLVNAETGQKSDILIELPANGNLTSDASLAVKK
MKVLHEEDGIDDGEMEEE
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgaatccggacaagttcacgcacaagaccaacgaggcgctggtctccgcccgcgagctc
gccctcgactccggccacgcccagttcactccgctccaccttgcctcagtcctcgtcgcc
gatcgtcagggcctcctcccccaggcccttgctaacgcctccggaggcgacgggaactcc
gtcgtccagtcattcgagcgcgttgtttcctccgccctcaaaaagcttccttcccaatcc
ccaccccctgacgatgcccccgtcgctacatccctcgtcaaggctattcgccgcgcgcag
tcttctcagaagtcccgtggggactcccacctcgccgtagaccagctaatcctaggccta
ctggaggattctcagattgcagatctcctcaaggaggccggcatcagcgctgcccgagtc
cgcgccgaagtcgagaagctacgcgggaaggaggggaagaaggtggagagcgcgtcaggg
gataccaacttccaggcccttaagacctacggccgtgaccttgtcgaggtcgctggaaaa
ctcgaccccgttattggacgtgacgaggagatccgccgcgtcatccgcattctctcccgg
cggaccaaaaataatcctgttttaatcggtgagccaggcgtcgggaaaacggccgtcgtt
gagggccttgctcagcgtatcgctcgcggggatgtcccgagcaatctgttcgatgttcac
cttgtggcgctagacatgggcgccttgatcgccggagccaagtaccgcggtgaatttgag
gagcgcgtcaaggcggtgctcaaggaagttgaggaggctgaaggcaaggtcattcttttc
attgacgaaatccacttggttcttggtgcaggccgaaccgaaggttctatggatgctgct
aacctcttcaagcccatgcttgcaagaggtcagctgcgatgcattggagcgacgacatta
gaggagtatcggaagtatgttgagaaagatgccgcctttgagcgccgattccagcaggta
tacgttgctgaacctagcgtcgctgactccattagcatccttcgaggactgaaggagaag
tttgaaggacaccatggtgttcgaatcctcgatcgtgccattgttgttgctgctcagtta
tcacatcgctatatcactgggcggcaccttcctgataaggcaattgacttggtcgatgag
gcttgtgccaatgtaagggttcaacttgatagtcaaccagaggagattgacaacttggag
aggaaaaggattcagttggaagttgaattgcatgcacttgagaaggagaaggacaaggct
agtaaagcaaggctagtcgaggttaagaaggaattggatgacttaagggataagctgcaa
ccattaatgatgaaatacaggaaggagaaggagaggattgatgaaattcgcaagttgaaa
caacgccgagaggagctattgattgctatgcaggaggctgagcgaagggggaatctgcct
cgtgttgctgacatcaagtttggagcattgcaagagatagatgtggctattgcaaagctt
gagggcgatgccaatgaaaatctaatgctcacagagactgttgggcctgagcatatcgca
gaggtggtgagccgttggacaggtattccggtgacaaggctggggcagaatgagaaggca
agattgatcgggctagcagagaggttgcacaagagagtagttggtcagaatcaggctgtt
gatgccgtagctgaagcagttctccggtcaagagctggccttggccggccacagcaaccc
actggctcatttctcttcttaggccccactggtgttggtaaaacagaacttgcaaaagct
cttgcagagcaattgtttgacgatgagaatcttctcatccgcatcgacatgtcagagtac
atggaacaacattcagtggcacgtctaatcggtgcaccaccagggtatgtgggccatgag
gaaggtgggcagttgactgaggcggtgaggcggaggccttacagcgtcattctcttcgac
gaagtagagaaagctcatgtggctgtgttcaatacgcttcttcaagttcttgacgatgga
aggttaactgatggtcaagggagaactgtcgacttcactaactcagttattatcatgacc
tctaatcttggtgctgaacaccttcttgctggaatggtgggagaatcttctctgcagatc
gctagggaaagagttatgcttgaggtcaggaagcattttagacctgagcttcttaatcga
cttgatgagatagtaatattcgatccactagctcatgatcaacttagaaaggtggctagg
cttcagatgaaggatattgctcgtcgtctcgctgagagagggattgcattggctataaca
gacgctgcgttggacgtagttctatctgaatcctacgatccgatctacggcgcaagaccg
atcaggagatggctagagaagaaagttgtgactcatatgtccaagatgctcatccagggt
gagatcgatgagaactcaactgtgtacattgacgcggttccaggaaagaaagagctgtct
tacaaggtggagaagaatggaggtcttgtgaatgccgagacggggcagaagtcggacatc
cttatcgagttaccggcgaatggcaatttgacaagtgacgcatctttggccgtgaagaaa
atgaaggtgctgcacgaggaggacggaatcgatgatggagaaatggaagaagagtag
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