KEGG   Zingiber officinale (ginger): 121982343
Entry
121982343         CDS       T08725                                 
Name
(RefSeq) chaperone protein ClpB1-like
  KO
K03695  ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:zof03110]
    121982343
Chaperones and folding catalysts [BR:zof03110]
 Heat shock proteins
  HSP100
   121982343
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 Clp_N AAA_22 AAA_16 Sigma54_activat AAA_18 bpMoxR AAA_14 AAA_7 nSTAND3 NACHT IstB_IS21 AAA_28 RuvB_N TsaE ATPase_2 RNA_helicase TniB ResIII AAA_25 Zeta_toxin DUF815 NBD_SMAX1 AAA_19 Mg_chelatase ABC_tran Torsin T2SSE DNA_pol3_delta2 DUF2987 DUF87
Other DBs
NCBI-GeneID: 121982343
NCBI-ProteinID: XP_042391296
LinkDB
Position
5A:147482415..147485999
AA seq 918 aa
MNPDKFTHKTNEALVSARELALDSGHAQFTPLHLASVLVADRQGLLPQALANASGGDGNS
VVQSFERVVSSALKKLPSQSPPPDDAPVATSLVKAIRRAQSSQKSRGDSHLAVDQLILGL
LEDSQIADLLKEAGISAARVRAEVEKLRGKEGKKVESASGDTNFQALKTYGRDLVEVAGK
LDPVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIARGDVPSNLFDVH
LVALDMGALIAGAKYRGEFEERVKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA
NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADSISILRGLKEK
FEGHHGVRILDRAIVVAAQLSHRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE
RKRIQLEVELHALEKEKDKASKARLVEVKKELDDLRDKLQPLMMKYRKEKERIDEIRKLK
QRREELLIAMQEAERRGNLPRVADIKFGALQEIDVAIAKLEGDANENLMLTETVGPEHIA
EVVSRWTGIPVTRLGQNEKARLIGLAERLHKRVVGQNQAVDAVAEAVLRSRAGLGRPQQP
TGSFLFLGPTGVGKTELAKALAEQLFDDENLLIRIDMSEYMEQHSVARLIGAPPGYVGHE
EGGQLTEAVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFTNSVIIMT
SNLGAEHLLAGMVGESSLQIARERVMLEVRKHFRPELLNRLDEIVIFDPLAHDQLRKVAR
LQMKDIARRLAERGIALAITDAALDVVLSESYDPIYGARPIRRWLEKKVVTHMSKMLIQG
EIDENSTVYIDAVPGKKELSYKVEKNGGLVNAETGQKSDILIELPANGNLTSDASLAVKK
MKVLHEEDGIDDGEMEEE
NT seq 2757 nt   +upstreamnt  +downstreamnt
atgaatccggacaagttcacgcacaagaccaacgaggcgctggtctccgcccgcgagctc
gccctcgactccggccacgcccagttcactccgctccaccttgcctcagtcctcgtcgcc
gatcgtcagggcctcctcccccaggcccttgctaacgcctccggaggcgacgggaactcc
gtcgtccagtcattcgagcgcgttgtttcctccgccctcaaaaagcttccttcccaatcc
ccaccccctgacgatgcccccgtcgctacatccctcgtcaaggctattcgccgcgcgcag
tcttctcagaagtcccgtggggactcccacctcgccgtagaccagctaatcctaggccta
ctggaggattctcagattgcagatctcctcaaggaggccggcatcagcgctgcccgagtc
cgcgccgaagtcgagaagctacgcgggaaggaggggaagaaggtggagagcgcgtcaggg
gataccaacttccaggcccttaagacctacggccgtgaccttgtcgaggtcgctggaaaa
ctcgaccccgttattggacgtgacgaggagatccgccgcgtcatccgcattctctcccgg
cggaccaaaaataatcctgttttaatcggtgagccaggcgtcgggaaaacggccgtcgtt
gagggccttgctcagcgtatcgctcgcggggatgtcccgagcaatctgttcgatgttcac
cttgtggcgctagacatgggcgccttgatcgccggagccaagtaccgcggtgaatttgag
gagcgcgtcaaggcggtgctcaaggaagttgaggaggctgaaggcaaggtcattcttttc
attgacgaaatccacttggttcttggtgcaggccgaaccgaaggttctatggatgctgct
aacctcttcaagcccatgcttgcaagaggtcagctgcgatgcattggagcgacgacatta
gaggagtatcggaagtatgttgagaaagatgccgcctttgagcgccgattccagcaggta
tacgttgctgaacctagcgtcgctgactccattagcatccttcgaggactgaaggagaag
tttgaaggacaccatggtgttcgaatcctcgatcgtgccattgttgttgctgctcagtta
tcacatcgctatatcactgggcggcaccttcctgataaggcaattgacttggtcgatgag
gcttgtgccaatgtaagggttcaacttgatagtcaaccagaggagattgacaacttggag
aggaaaaggattcagttggaagttgaattgcatgcacttgagaaggagaaggacaaggct
agtaaagcaaggctagtcgaggttaagaaggaattggatgacttaagggataagctgcaa
ccattaatgatgaaatacaggaaggagaaggagaggattgatgaaattcgcaagttgaaa
caacgccgagaggagctattgattgctatgcaggaggctgagcgaagggggaatctgcct
cgtgttgctgacatcaagtttggagcattgcaagagatagatgtggctattgcaaagctt
gagggcgatgccaatgaaaatctaatgctcacagagactgttgggcctgagcatatcgca
gaggtggtgagccgttggacaggtattccggtgacaaggctggggcagaatgagaaggca
agattgatcgggctagcagagaggttgcacaagagagtagttggtcagaatcaggctgtt
gatgccgtagctgaagcagttctccggtcaagagctggccttggccggccacagcaaccc
actggctcatttctcttcttaggccccactggtgttggtaaaacagaacttgcaaaagct
cttgcagagcaattgtttgacgatgagaatcttctcatccgcatcgacatgtcagagtac
atggaacaacattcagtggcacgtctaatcggtgcaccaccagggtatgtgggccatgag
gaaggtgggcagttgactgaggcggtgaggcggaggccttacagcgtcattctcttcgac
gaagtagagaaagctcatgtggctgtgttcaatacgcttcttcaagttcttgacgatgga
aggttaactgatggtcaagggagaactgtcgacttcactaactcagttattatcatgacc
tctaatcttggtgctgaacaccttcttgctggaatggtgggagaatcttctctgcagatc
gctagggaaagagttatgcttgaggtcaggaagcattttagacctgagcttcttaatcga
cttgatgagatagtaatattcgatccactagctcatgatcaacttagaaaggtggctagg
cttcagatgaaggatattgctcgtcgtctcgctgagagagggattgcattggctataaca
gacgctgcgttggacgtagttctatctgaatcctacgatccgatctacggcgcaagaccg
atcaggagatggctagagaagaaagttgtgactcatatgtccaagatgctcatccagggt
gagatcgatgagaactcaactgtgtacattgacgcggttccaggaaagaaagagctgtct
tacaaggtggagaagaatggaggtcttgtgaatgccgagacggggcagaagtcggacatc
cttatcgagttaccggcgaatggcaatttgacaagtgacgcatctttggccgtgaagaaa
atgaaggtgctgcacgaggaggacggaatcgatgatggagaaatggaagaagagtag

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