Zingiber officinale (ginger): 121986326
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Entry
121986326 CDS
T08725
Name
(RefSeq) adagio-like protein 3
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
121986326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121986326
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121986326
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_5
Kelch_2
Kelch_6
Kelch_1
PAS_9
NANM
PAS_3
F-box-like
F-box
PAS
PAS_4
PAS_8
Motif
Other DBs
NCBI-GeneID:
121986326
NCBI-ProteinID:
XP_042396145
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Position
1B:159737142..159740621
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AA seq
619 aa
AA seq
DB search
MAAGAETAGGGEQKPLKRMKWSPDDEMEVEEEFEVVAEEEMVDLGRFYYPLTPSAFVVSD
AAQPDFPIIYVNSVFENATGYRADEVLGRNCRFLQFRDPRAQRRHPLVDPMVVAEIHRCL
EEGIEFHGEILNFRKDGTPLVNRLRLMPIYGDDGFVTHIIGIQLFSEANIDLNRLSYPVF
KHNSCIKSSNQDANSSISETDCIIRYQDYCGILQLSDEVLAHNILSRLTPRDVASIGSVC
TRMRQLTKNEHLRKVVCQNAWGREVTIRLELSTKKLGWGRLARELTTLEAASWKKFTVGG
RVEPSRCNFSACAVGNRLVLFGGEGINMQPMDDTFVLNLESTNPEWHRVKVTSSPPGRWG
HTLSCLNGSWLVVFGGYGRQGLLNDVFVLDLDAKQPGWKEVFGEAPPLPRSWHSSCTVDG
SKLVVSGGCTDAGVLLSDTYLLDLTREKPTWREIPSSWVPPPRLGHTLSVYDKTKILMFG
GMAKSGTLRLRSCDTYSIDLEEEEPQWRQLGTNGFPGAGPPPRLDHVAVSLPCGRIIIFG
GSIAGLHSPSQLFLLDPLEEESTWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGRTGEE
WILNELHELCLASRPDGDA
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggagcggaaacggcgggaggaggggagcagaagccgctgaagcggatgaag
tggtcgccggacgacgaaatggaggtggaggaagagtttgaagtggtggcggaggaggag
atggtggacctcgggcggttctactaccccctcaccccctccgccttcgtcgtctccgat
gccgcccaacctgacttcccgatcatttacgtcaactccgtttttgagaacgccaccggg
taccgcgccgacgaggtcctcggaaggaactgccgattcttgcagtttcgtgatccacga
gcacaaagaaggcatcccctggtggatcctatggttgttgctgaaattcatagatgtcta
gaggaaggcatagagtttcatggagagattctcaactttcggaaggatggaactccattg
gtaaacagattgaggctcatgcccatatatggtgatgatggttttgtgacccacatcata
gggattcagttattctctgaagcaaacattgatctcaaccgtttatcctaccctgtcttc
aaacacaactcctgcattaagtcctctaatcaggatgcaaattcttctatttctgaaact
gactgtattatcagataccaagactattgtgggattctccagctctcggatgaagtcctt
gctcacaacattctgtcacgactaacacctagggatgtagcatctattggatcagtatgc
acaaggatgcgtcagctaacaaagaatgagcacttgaggaaggtggtttgccaaaatgca
tggggaagagaagtgaccataagattggaactgagcaccaaaaaattaggctggggcaga
cttgctagggagctaaccacactggaggcagcttcatggaagaagttcactgttggtggt
agagtagaaccttcccgttgcaatttcagtgcatgtgctgttggtaaccggttggttctc
tttggaggagaaggcatcaacatgcaaccaatggatgatacttttgtccttaatcttgag
tcaacaaatccagaatggcaccgtgtgaaggtcacttcttctcctccaggacgttgggga
catactctttcatgtctaaatggatcatggctagttgtcttcgggggctatggaaggcaa
ggattactcaacgatgtatttgtgttggatttggatgccaagcagccaggatggaaagaa
gtatttggtgaagctccccctttgcccagatcctggcacagctcttgcactgttgatgga
tcgaaactggttgtatcaggtgggtgtacagatgctggtgtgcttctgagtgacacctat
ctgctggatttgacaagagagaagccaacatggagggagataccttcttcatgggttcct
cccccaagactcggccacacactttcagtatatgacaaaactaagattttaatgtttggg
ggtatggcaaagagtggtacactaaggctgcggtcatgtgacacttacagtattgattta
gaagaagaggagccacaatggaggcagcttgggactaatggtttcccaggtgcagggcct
ccacctagattggaccatgtagcagtgagtttaccctgtggaaggatcatcatctttggt
ggatcaattgcaggacttcactccccatctcagctcttcctcctggatcccctggaagaa
gaatcgacatggaggatcctcaatgtccctggtcagccaccaaagtttgcatgggggcat
agcacttgtgtagttggagggacgagggttcttgttcttggcggacgcacaggtgaagaa
tggattctgaacgagttacatgagctgtgcttggccagtagacctgatggagatgcataa
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