KEGG   Zingiber officinale (ginger): 121988534
Entry
121988534         CDS       T08725                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121988534
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zof03041]
    121988534
Spliceosome [BR:zof03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    121988534
 Complex B
    121988534
 Complex C
   U2 SnRNP specific factors
    121988534
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 121988534
NCBI-ProteinID: XP_042397936
LinkDB
Position
6B:complement(101561312..101564403)
AA seq 816 aa
MFSSILTLPAPPADGDLGPIPPSQISADVSISEPQDQKELPPPPPPAPVATHTNPIGIIH
PPPDVRMIIDKTATFVAKNGPEFEKRILAHNAGNNKFNFLISSDPYHAYYQHKVSEQRAL
AQSAPQLPPGDASQATDAAPLPSDGSIAPTSATAPSDEAAAKVDPAAQFRIPPKKVLEPP
DAEQYTVRLPEGITGEELDIIKLTAQFVARNGKNFLTNLSNREMSNPQFHFLKPTHSMFT
FFTTLTDAYSKVLMPPTGLTEKLHKSIRDRTTVLERCLHRLEWERSQEQARLLAEDEIEQ
ERMQMAMIDWHDFVVVETIEFADDEEEELPMPMTLDQVIRRSKMSALDEEEPNQIAEPGK
EMEMEMDEEEIQLVEEGMRAARLEENGTDEKRSEIKAPSDEPEPPMRIVKNWKRPEERIH
AERDPTNFVISPITNELIPINEMAEHMRISLIDPKYKEQKERMMAKIRETTLAPDDEISK
NIVGLARTRPDIFGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHSGSIGRTATQALSQGA
TGEEQTDTNSDLRLLPGPAPAPRPGVPLVRPLPPPPGLALNIPRFPPNMVPYSVPGSAGG
VVPPPRPGMMPMMPSVRPAPSSMPLNSSQQPIMINQQPGIQVNPPSFPVPPPPGSQFTPL
GVPRPFVPMHMPPPNMQMVPPPPPPYGMPPPPPPEDAPPLPDEPEPKRQRVDDVSLIPED
QFLAQHPGSVRVSVLVPNVDEGNLKGQLLEITVQSLAETVGSLKEKIAAEVQLPANKQKL
SARAGFLKDNLTLAYYNIGLGEALTLALRERGGRKR
NT seq 2451 nt   +upstreamnt  +downstreamnt
atgttttcctcgattctaactctcccagccccgcccgccgatggagatctaggcccgatt
cctccttcccagatttccgccgatgtctctatcagtgagcctcaggatcagaaagaactc
ccgccgccgcctcctccagctccggtcgccacccacacgaacccaattggtatcatccat
cctccgccagatgtccgaatgatcatagataagactgcaactttcgtcgccaaaaatggc
cctgagttcgaaaagagaatccttgctcataatgccgggaacaacaagttcaattttttg
atttcttcggatccttatcatgcatactatcagcataaagtttcagagcaacgtgccttg
gctcaaagtgcccctcagctgcccccaggagacgcctctcaggcgacggatgctgcccct
ttgccttctgatggctcgattgcccctacatctgcaactgcaccatccgatgaggcagca
gctaaggtcgaccctgctgctcagttcaggattcctccaaagaaggtccttgagccacct
gatgctgaacaatacacagttaggctccctgaaggaatcactggtgaggaattggacata
attaagctcactgcacagtttgtcgcacgcaatgggaagaacttcctgaccaatctttca
aaccgtgagatgagcaaccctcaattccacttcttgaagccaacacacagcatgttcacg
ttcttcacgactttgacggatgcatactccaaggtgctgatgcctccaacagggttgaca
gaaaagctgcataaaagcatcagggataggacaacagtacttgagagatgtttgcaccgt
ttggaatgggagcggtctcaggaacaagctaggcttttggctgaggatgagatcgagcag
gagaggatgcaaatggcgatgattgattggcatgattttgttgtggtcgaaaccattgag
ttcgctgatgacgaggaagaagagcttcccatgccaatgacattggatcaggtcataagg
aggagcaagatgtctgcattggatgaagaggaaccgaatcaaatagctgaaccaggcaaa
gagatggagatggagatggatgaagaagagatacaacttgtcgaggaaggaatgagagct
gcaagacttgaggagaatggcacggatgagaagaggagtgaaataaaggcacctagtgat
gagcctgagcctccaatgcggatagtgaagaactggaagaggcctgaggagaggattcat
gctgaacgagatccaacaaactttgtgatttcacccatcaccaatgagctaattcctatc
aatgagatggcagagcacatgcgcatctctctcatcgatcccaaatacaaggagcagaag
gaaagaatgatggctaaaatccgggagactactcttgctcctgatgatgagatttccaag
aacattgttgggcttgcacgaactcgtcctgatatttttggcaccacagaagaagaagta
tctaatgctgttaaagcagaaattgagaaaaagaaggatgagcagccaaagcaggtcata
tgggatggacactcaggaagtattgggcgcactgccactcaagccttatcacagggtgca
actggtgaggaacaaactgatactaacagtgacttgaggttacttccaggtccagcacca
gcacctagacctggtgtgccgttagtccgcccgcttcctccacctcctggattggcacta
aatattcctcgtttcccaccgaacatggttccatattctgttcctggatcagctggtggt
gttgtccctcctccaaggcctggcatgatgccaatgatgccttctgtgaggcctgcacct
tcatctatgcctttgaattcgtcacagcagcccattatgattaaccagcagccaggaatt
caagtcaacccaccgagctttcctgtgcctccccctcctggatcccaatttacaccgtta
ggggttcctcgaccatttgttccaatgcatatgccaccgcctaacatgcagatggttcct
ccgcctccgcctccatatggaatgccacctcctccacctccagaggacgctccaccactt
cctgatgaacctgaaccaaaacggcaaagagtcgacgatgtttctctcattccagaggat
cagttccttgctcaacatcctggatctgtccgagtttctgtattggttcctaatgtggat
gaaggaaacttgaaaggtcaacttttggagatcacagtccagtctctggctgagactgtt
ggcagtcttaaggagaaaattgcagccgaggttcagcttcctgctaataagcagaaactg
agtgctcgggctggttttctcaaggataatcttacgcttgcgtactacaacattggcctt
ggcgaagctctgacacttgctctaagggaacgtggcgggaggaagagatga

DBGET integrated database retrieval system