Zingiber officinale (ginger): 121995245
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Entry
121995245 CDS
T08725
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00040
Pentose and glucuronate interconversions
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121995245
Enzymes [BR:
zof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121995245
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
121995245
NCBI-ProteinID:
XP_042404965
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All DBs
Position
6A:complement(121355222..121356916)
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AA seq
446 aa
AA seq
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MVPRSTFFFFSLLFLASATFSAAHIADFDDYWKKKAELAVAKNQASYNPDPESVTSTFNA
DVHKETLDMEEETANSTRRGLRGKKKNLIGEPCVATNPIDRCWRCRSDWSKNRKLMGQCA
KGFGRHTTGGLDGRFYIVTTPVDDDMVNPKKGTLRWGVIQDRPLWIVFASDMIIRLSEEL
IVNSNKTIDGRGFNVRIIGGAGITLQYIHNIIISNIHIQDIKPGNGGMIRDSEVHWGFRT
RSDGDGISIFGASNIWIDHVSMDNCGDGLIDAIMGSTAITISNSHFTQHNDVMLFGASDA
YSPDAILQITLAFNHFGRGLVQRMPRCRWGFVHVVNNDYTHWLMYAIGGSQHPTILSQGN
RFIAPPNIFAKEVTKREYSPENVWKNWNWTSDGDLFQNGAVFIPSGVTPDKDGFLLKDLI
KAKPGAFVTRLTRYSGALDCIRGRPC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggtgccgaggtcaacgttcttcttcttctcgctgcttttcttggcctccgccaccttc
tccgctgcgcacatcgccgactttgatgattactggaagaagaaggctgaattggcagtt
gccaaaaatcaagcctcctacaaccccgaccctgaatccgtcaccagcaccttcaatgcc
gatgtccacaaagagacgctggacatggaggaagagacggcgaacagcacgagaagaggg
ttgcgcgggaagaagaagaatttgataggggagccctgcgtggcgacgaacccgatcgac
cggtgctggcggtgccgcagcgactggagcaagaaccggaagctgatgggtcagtgcgcg
aaggggttcgggcggcacaccaccggcgggctggacggccggttctacatcgtcaccacc
cccgtcgacgacgacatggtgaaccccaagaaggggacgctgcggtggggcgtgattcag
gaccggccgctgtggatcgtcttcgccagcgacatgatcatccggctcagcgaggagctg
atcgtgaacagcaacaagaccatcgacggccgcggcttcaacgtccggatcatcggcggc
gcaggcatcaccctccagtacatccacaacatcatcatcagcaacatacacatccaagac
atcaagcccgggaacggcggcatgatccgcgactccgaggttcactggggcttccgcact
cgcagcgacggcgacggcatctccatcttcggggccagcaacatctggatcgaccacgtc
tccatggacaactgcggcgacggtctcatcgacgccatcatggggtccaccgccatcacc
atctccaactcccacttcacccagcacaacgacgtgatgttgttcggtgctagcgatgcc
tactcccccgatgcgatcctgcagatcaccctcgccttcaaccacttcggccgaggactc
gttcagagaatgccaaggtgtcgatggggttttgtccatgttgtgaacaatgactacacc
cattggctgatgtatgcaatcggaggcagccaacaccccaccattctgagtcaaggcaat
cgattcattgctccaccaaacattttcgccaaggaggtgacgaagagggagtattctcca
gaaaacgtgtggaagaattggaactggacatcagacggtgacctatttcaaaatggagcc
gtgtttataccatcgggcgtgactccggacaaggacggcttcctcctaaaggacctcatc
aaggccaagcctggcgccttcgtcacgagactcactcgctactccggcgctctcgactgc
atccgcggccgaccttgttaa
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