Zingiber officinale (ginger): 122000640
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Entry
122000640 CDS
T08725
Name
(RefSeq) beta-adaptin-like protein C
KO
K12392
AP-1 complex subunit beta-1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122000640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122000640
Membrane trafficking [BR:
zof04131
]
Endosome - Golgi transport
Others
AP-1 complex
122000640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
Alpha_adaptinC2
PDS5
HEAT_EZ
Atx10homo_assoc
Arm_2
UNC45-central
DUF1422
Motif
Other DBs
NCBI-GeneID:
122000640
NCBI-ProteinID:
XP_042410957
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Position
7A:689761..704855
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AA seq
896 aa
AA seq
DB search
MSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCM
QTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKI
TEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLDILKDLISDNNPMVVA
NAVAALAEIQETSSQSIFEITSHTLSKLLTALNECTEWGQVFILDALSRYKASDAREAED
IVERVTPRLQHANCAVVLSAVKMILLQMELITSTDVIRNLCKKMAPPLVTLLSAEPEIQY
VALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE
YATEVDVDFVRRGVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR
YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLETFPEEPALV
QLQLLTATVKLFLKKPTESPQQMIQAVLNNATMETDNPDLRDRAYIYWRLLSTDPEAAKD
VVLAEKPVISDDSNQLDPSLLDELLTNIATLSSVYHKIPDTFISRAKSAATRPEDDDYAE
GGETAYSETPSHAVDGTSASPSNISHAETKLQEATAEISAPVPDLLGDLIGIDNAIVPID
QPTTPTEPPLPVLLPASTGQGLQISAHLTRQNGQIFYAIMFENNTQGVLDGFMIQFNKNT
FGLAAAGPLQVPSLQPGSSVRTLLPMVLFQNVSADPPSTLLQVAVKNNQQPVWYFSDKMS
LHVFFAEDGRMERATFLETWKSLPDTNEVGKDLPNSIINNVDATIEHLAASNIFFVAKRR
NANKDLLYLSAKIPRGIPFLIELTCVLGVVGVKCAVKTPNPEMAALFFEAMETLLK
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtcacgactccaaatacttctccaccaccaagaagggagagatccccgagctc
aaggaggagctcaattcacagtacaaggataagagaaaagatgctgtgaagaaggtgata
gctgcaatgactgtaggaaaagatgtttcatcattgttcacagacgtcgtaaactgcatg
caaacagagaatctggaattgaagaaacttgtctatttgtatctgataaactatgccaag
agtcaaccagatctagccatacttgctgtgaatacatttgtgaaggactcacaagaccct
aaccctctgatccgtgccttagctgtgaggacaatgggctgcatccgtgttgacaaaatc
acagaatatctgtgtgatccccttcaaagatgtctaaaggatgacgatccttatgtccga
aagacagcagcaatttgtgtagctaaattgtatgatataaatgctgagttagtggaagat
aggggtttcttggatattctcaaggacttgatatctgacaacaatccaatggtagtggca
aatgccgttgcagcacttgcagagatccaggaaactagcagtcaatcgatctttgagatt
actagtcatacactttcaaagcttctgactgctttaaatgaatgcaccgaatggggccaa
gtattcattttggatgctttatcaaggtataaagcttctgatgctcgagaagctgaagat
atagttgagagagtaaccccacgccttcaacatgcaaattgtgctgtcgtgctttctgct
gtcaagatgattcttctgcaaatggaacttatcactagtactgatgtaattcgaaacctt
tgcaagaagatggctccgcctctggtaactcttctttctgcagaaccagaaattcagtat
gtagccttgcggaacatcaatcttattgttcagaaaaggcctacaatacttgcacatgag
atcaaggttttcttttgcaagtataatgacccaatttatgttaagatggaaaaattggag
attatgataaagctagcctcagatcggaacatagaccaggttctgttggaattcaaagag
tatgccacagaagtagatgtagactttgttagaaggggtgtgcgtgcaattggacgttgt
gccatcaagttagagagggctgctgaacggtgcatcagtgtattgcttgagttgataaag
ataaaagtcaactatgttgtgcaagaggctatcattgtcataaaggatatcttccgacgt
tatcctaacacctatgaatccatcattgcaacactatgtgaaagtttggacactttagat
gagccagaggctaaggcatcaatgatatggataattggcgaatatgctgaaaggattgac
aatgctgatgagctcctagaaagctttctagaaactttccctgaagaacctgcactagta
caattgcaactgctcactgcaacagtaaagttgtttcttaagaagccaactgaaagtccg
caacagatgattcaggctgttcttaataatgcaacgatggaaacagacaatcctgatttg
cgtgatcgtgcatacatttattggcgccttctttctactgatcctgaggctgctaaagat
gttgttttagctgaaaaaccagtaataagtgatgattcaaaccagcttgatccgtcactc
ctggatgagctcctcacaaatattgctaccctttcttctgtttatcataagataccagat
acttttataagtcgtgcaaagtcagctgcaactagaccagaggatgatgattatgccgag
ggaggagaaactgcttattctgagacaccgtctcatgctgtcgatggtacaagtgcttct
cctagtaacatttctcatgctgaaacaaagctgcaggaagcaacagcagaaatctctgca
cctgtgccagatttactaggtgatttaattggcatcgacaatgctattgtccctatagac
cagccaacaacacctacagaacctcccttacctgtattacttcctgcatctacgggacaa
ggattacagataagcgcacaccttactcgccaaaatggccagatattttatgctataatg
tttgagaacaacacacagggtgtattagatgggttcatgatacagttcaacaaaaataca
tttggtcttgcagctgctgggcctttgcaggttccatcattgcaacctggatcttcggtg
aggacacttttgccaatggttttattccagaatgtctcagctgaccctcccagcacactt
ttgcaagttgcagttaaaaataatcagcagccagtctggtacttcagtgacaaaatgtca
ttgcatgttttctttgctgaagatggcagaatggaacgtgcaacttttctcgagacttgg
aaatccctgccagatacaaacgaagtggggaaggacttgccaaattccatcatcaacaat
gttgatgctaccatcgaacatttggctgcatccaacattttctttgtcgcaaaacgaagg
aatgccaacaaagatttgctctatttatcagccaagattcctagaggaattcctttcctg
atagaacttacttgtgtccttggtgttgtgggtgtaaaatgtgctgtgaaaacaccaaac
ccggagatggcagcactcttctttgaagccatggagaccctgctgaagtga
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