Zingiber officinale (ginger): 122002908
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Entry
122002908 CDS
T08725
Name
(RefSeq) probable histone acetyltransferase HAC-like 1
KO
K04498
E1A/CREB-binding protein [EC:
2.3.1.48
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03083
Polycomb repressive complex
zof03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122002908
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122002908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122002908
03036 Chromosome and associated proteins [BR:
zof03036
]
122002908
03029 Mitochondrial biogenesis [BR:
zof03029
]
122002908
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
122002908
Transcription factors [BR:
zof03000
]
Eukaryotic type
Other transcription factors
Pocket domain CBP
122002908
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
122002908
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
122002908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_KAT11
zf-TAZ
ZZ
PHD
KIX_2
GpA_ATPase
Motif
Other DBs
NCBI-GeneID:
122002908
NCBI-ProteinID:
XP_042414228
LinkDB
All DBs
Position
7A:complement(140345836..140362670)
Genome browser
AA seq
1695 aa
AA seq
DB search
MNAHAFSGQMANQMSSQMPVPPQQIGNYMSSQMQNLGPRPLDPELQEARKTMQQKIYNAL
LKRNQTSSEEWVRKLPEIVRRLEERIYKDTPTREDYLNLALEPIENRLSSIIKNVVSHSR
SLPHQNLPSSTASTMIPTPGISNNIGINASVSVQPENPTLTGINNAIAPQNTTNMGNFTS
YGLNDAGTVSSSYHQQSANYALGAGGRSMMPSVTPSNMSRQFPQMIPTPGFNNQHVAASS
ESSNVVGISNTDTAVAQHPLQQKKYIVNQNSHMLHQIGAGIRSNVIHQSSPYGLSNGLAN
GTFGLVGNNGSATSEGFVGPPPYVSSLKPLQKNFDQQQHQLREPTSLSHQLSSIVDDVYN
SNATNATSSETFPGPDSSVLSAMNNMNAVNLHPKLRTNSGLLNHHASLQSMRLPLNVRAQ
FLDQSEKLNYQSSQSTSENLLQSPQHAEQSSQQPSQAYPQYVPNQYQLLRRHQGSIQNQQ
LMPKTDSLRDSSVASHFAEQLIPGNAKIVYSDPLIQSSSAQDQSQTQYHQIGSSEDHAKS
VQFLGHLGSQGFHVSVSEDSQPLLHPNVQSDGFSDKFDHLSTELQAEDLQFQWNSQPLHA
QMPDKLSCQQLEEELERTIRQDDPQRCDLSTRDVNSEHEDYINKQNYIKQVRWLLFIHHA
RRCPAPKGLCKEANCTKVQELVLHMDTCKNDHCNFPRCFQSRKLVGHIRNCKVPDCPVCI
PVRNHLAANYKAHAHALSGTAGETETKKVTETIKKDTMPTENFEDKEYLAKRLKVQNTTF
SPNNDFSRVQFSSGNQASDPQEAQSLEFKQTLPAISEVIVKMDESSGSRQDKKPTLSSTS
NGFVSSPNWKKDPIVTKSVDVHVKQESMLVDNMPDQSVSNIQQDHENLQTDLVSGNKSGK
PKIKGVSLIELFTPEQIKEHIVGLRQWVGQSKAKAEKNQALERSMTENSCQLCAVEKLTF
DPPPIYCSPCGARIKRNAFYYTVGTGETRLYFCIPCYNEARGDTIEAEGSTFLKARLEKR
RNDEETEEWWVQCDKCESWQHQVCALFNGRRNDGEAEYTCPNCCVEEIEKGERKPLPETA
VLGAKDLPRTILSDHIEQRLFRQLKQERQERARQLGKSYDEVPGAEGLVVRVVSSVDKKL
EVKQRFLEIFQEENYPKEFPYKSKAILLFQKIEGVEVCLFGMYVQEFSSECSFPNQRRVY
LSYLDSVKYFRPEIKAVSGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYI
LYCHPEIQKTPKSDKLREWYLTMLRKASKENIVVELINLYDHFFTTMGECKARVTAARLP
YFDGDYWPGAAEDMINQLRQEEDGRKQLKKGKTKKTITKRALKAAGQTDLSGNASKDALL
MQKLGETICPMKEDFIMVHLQYSCTHCCILMVSGTRWVCNQCKNFQLCDRCHEAELRIEE
RDKHPPNSREKHLLYPVEINDVAYDTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRR
AKHSSMMILYHLHNPAAPAFVTTCNVCHRDIESGLGWRCESCPDFDVCNDCYKKGGIDHP
HKLTNHPSMADRDAQNKEARAKRVLQLRKMLDLLVHASQCRSPQCQYPNCRKVKGLFRHG
IQCRTRASGGCVLCKKMWYLLQIHSRACKESECSVPRCRDLKEHLRRLQQQSDSRRRAAV
MEMMRQRAAEVAGST
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcacatgccttctctgggcagatggctaaccagatgtctagccaaatgcctgtt
ccgccccagcagattggaaactatatgtcatcccagatgcagaatctcggacctagacca
ttggatcctgaacttcaagaggctcgaaaaaccatgcaacagaagatctataatgcactt
ctaaaaagaaaccaaacgtcttctgaagagtgggtacggaagttaccagaaattgttagg
cgtttggaggagcgtatatacaaggatactcccactagggaagattatttgaatttagct
ttagaaccaatcgaaaaccgtttatcatcaataatcaagaatgttgtcagtcacagtcga
tctttgccgcatcagaatttaccttcctcaactgctagcacaatgattccaactccgggc
atatccaacaatattggtattaatgcttctgtttcagttcaaccagagaaccctacactt
actggcatcaataatgctattgctcctcaaaatacaacaaacatgggaaattttacctca
tatggtcttaatgatgctggaacagtttcaagtagttaccatcaacaatctgccaattat
gctcttggtgcaggtggaagaagtatgatgccctcagtaacaccaagtaacatgtcaaga
caatttcctcagatgataccaactcctggatttaataatcaacatgtagctgccagttct
gagtcttctaatgtagtcggaatttctaacactgacactgctgtggctcaacatccactc
cagcaaaaaaaatacatagtaaatcagaacagccatatgctgcatcaaattggtgctgga
ataaggtccaatgttattcaccagagttccccctatgggctctcaaatggacttgcaaat
ggtacatttggtttagttgggaacaatggctctgcaacatcagagggttttgtaggccca
cctccttatgttagttctttaaagcccctgcagaagaactttgatcagcaacaacaccaa
ctaagagagccaacatcattgtcacatcaactatcatctatcgttgatgatgtctacaac
tcaaatgcaactaatgctacatcctctgagacatttcctggacctgattcatctgtttta
tctgcaatgaacaacatgaatgctgtaaatttgcatcctaagttaagaaccaactcaggt
ttgctaaatcatcatgctagtttacaatcaatgaggcttcctttgaatgtaagagcccaa
tttctcgatcaatcagagaaattgaattaccagtcatcccagtcaaccagtgaaaattta
ctacaatcaccacaacatgcagaacagtcttcacagcagcctagtcaagcttacccgcag
tatgttccgaaccagtatcaactattacggagacatcaaggtagcatacagaaccaacaa
ttgatgccaaagactgattcattgagagattcctcagtggcttcacattttgccgagcag
ctaatacctggtaatgcaaaaatagtctattccgatcctttgattcagtcatcatctgca
caggaccagtctcagacacaataccaccagattggttcttctgaggaccatgctaaaagt
gttcaattccttggtcatctgggatctcaaggttttcatgtctcagtttcagaggattca
caacctctgctgcatccaaatgtgcagtctgatggattttcagacaagtttgatcatttg
tcaactgaactgcaagcagaggatctccagtttcagtggaattctcaaccattacatgca
cagatgccagataaattatcttgtcaacaacttgaggaggagctggaaagaacaataagg
caagatgaccctcagcgatgtgatctatctaccagagatgtgaactctgaacatgaagac
tatataaacaagcaaaattatattaaacaagtaaggtggctgctatttatacaccatgct
cgccggtgtccagcaccgaagggattatgcaaagaagctaactgcaccaaagttcaagag
ttggttttgcatatggacacctgtaagaatgaccactgtaattttccacgctgtttccaa
tctaggaaacttgttgggcatattcgcaattgcaaagtgcctgattgtcctgtctgcatc
ccagtgcgcaaccatttagctgcaaattataaagcacatgctcatgctttatctggtacc
gctggggaaactgaaacaaaaaaggttactgaaacaataaaaaaagataccatgccaact
gaaaattttgaggacaaagagtatttggctaagcgcctgaaggttcaaaatacaaccttt
tctcctaacaatgatttttcacgagttcagttttcatctgggaatcaagcatctgatccc
caggaggcacagtctttggaattcaaacaaactcttcctgctatttctgaggtgattgtg
aagatggatgaatcttctggatccaggcaagacaaaaaaccaactcttagcagtacaagc
aatgggtttgtaagttcaccaaactggaaaaaagatcctattgttactaagtctgttgat
gttcatgtgaaacaagagagcatgttggttgataacatgccagaccagtcagtcagtaat
atccagcaggatcatgaaaacctacaaacagatttagttagtggaaataaatcaggaaag
ccaaaaataaaaggtgtttcattgatcgaactgttcactcccgaacaaattaaggagcac
atagttggtctgaggcaatgggttggtcagagtaaagcaaaagctgagaagaatcaagca
ttggagcgctcaatgacagagaactcatgccagctttgtgcagtagaaaaactcactttt
gacccccctccaatatattgttccccatgtggcgctcgaataaaacgaaatgctttttat
tatacagttgggactggtgaaacccgtctttacttctgtattccttgttataatgaagcc
cgtggtgacactatagaggctgaaggatctactttcttaaaagcaaggctagagaagagg
agaaacgatgaggaaactgaagaatggtgggtgcagtgtgataaatgtgaatcttggcaa
caccaagtatgtgctctttttaatggtcgaagaaatgatggtgaagcagaatatacttgc
cctaattgctgtgtggaggagatagagaaaggggaacgaaagcccttgcctgaaactgct
gttcttggtgcaaaagatttgcctagaactatactgagtgatcacatagagcagcggctt
tttagacagcttaagcaggagaggcaagagagagctaggcagcttgggaaaagttatgat
gaggtgcctggtgctgaaggacttgtggttagagttgtatcatctgttgataaaaaattg
gaagtaaagcagcgttttcttgagatatttcaggaagaaaattacccaaaagagttcccc
tataaatccaaggctatattgctgtttcagaaaatagaaggtgtagaagtatgccttttt
gggatgtatgttcaagaatttagttcagaatgttcatttcctaatcagaggcgtgtctat
ctatcatatctagactctgttaagtacttcaggcctgagatcaaggcagtgagcggggaa
gctttgcgaacttttgtctatcatgaaattctgattggataccttgagtattgcaagaaa
cggggctttactagctgttatatatgggcttgtcctcctttgaagggtgaagactacata
ttatactgccatcctgagattcagaagactccaaaatctgacaaacttagggagtggtac
ttgacaatgctacgaaaagcttctaaggagaatattgttgttgagctgataaatttatat
gatcatttctttacaactatgggtgagtgcaaggccagagtaactgcagctcgtttacca
tatttcgatggagattattggcctggtgcagctgaggatatgataaaccaacttcgtcaa
gaagaagacggtagaaaacaactgaagaaaggaaaaaccaaaaagactattacgaaaagg
gctttaaaagctgctggccagactgatctttctggaaatgcctctaaggatgccctgcta
atgcaaaaacttggcgaaactatatgccctatgaaggaagattttataatggtccattta
caatattcctgtacacattgttgtatattaatggtatctgggacgcgatgggtttgcaat
caatgcaaaaactttcaactttgtgataggtgtcatgaagcagaactaagaattgaggaa
agggataaacatcctcctaatagtagggaaaagcatctgctatatccagttgaaattaat
gatgttgcatatgacacaaaggacaaagatgagattcttgaaagtgagtttttcgacact
aggcaggcatttctgagcctttgtcaagggaaccactatcagtatgatacgctacggcgt
gctaagcattcatctatgatgatcttataccatctccacaatcctgctgcccctgcattt
gttaccacatgcaatgtttgccaccgtgatattgaatctggtttggggtggcgttgtgaa
agttgtcccgattttgatgtatgcaatgattgttataaaaaaggtggtattgaccatcca
cataagttgactaatcatccatcaatggcggatcgtgatgcacaaaataaagaagctcga
gcaaaacgtgttttacagcttaggaaaatgttggatcttttggtgcacgcttcccagtgt
cgctctcctcaatgccaatatccaaattgccgcaaagttaaaggtcttttccgccatgga
attcaatgcaggacgcgtgcttctggaggctgtgttctgtgtaagaagatgtggtacctc
ctccaaatacattctcgcgcctgtaaagaatcagaatgcagtgtaccgcggtgcagggat
ttgaaagagcacttgagaagattgcagcagcagtctgattccagaaggcgggcagcagtg
atggagatgatgcgacaacgggcagctgaggttgcagggagcacttga
DBGET
integrated database retrieval system
