Zingiber officinale (ginger): 122015560
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Entry
122015560 CDS
T08725
Name
(RefSeq) polyubiquitin isoform X1
KO
K08770
ubiquitin C
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122015560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122015560
Ubiquitin system [BR:
zof04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
122015560
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SSDB
Ortholog
Paralog
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GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
122015560
NCBI-ProteinID:
XP_042428458
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Position
8B:complement(15303058..15304898)
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AA seq
393 aa
AA seq
DB search
MDCFRLSLFCRLMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD
KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGQ
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggattgctttcgtctgtccctattttgtagattgatgcagatcttcgttaaaactctc
actggcaagacaatcacccttgaggttgagtcttctgataccatcgacaacgtaaaagca
aagatccaggacaaggaggggatcccccctgaccaacaaagattaatctttgccggcaag
caactcgaggacggcaggacccttgccgattacaacatccagaaagagtccaccctacac
cttgtgctccgtctccgcggtggcatgcagatctttgtcaagaccctaaccggaaagacc
attacacttgaggtggaatcctctgacaccattgacaacgttaaagccaagatccaggac
aaggagggtattccgccggaccagcaaaggttgatctttgccgggaagcaacttgaggac
ggccgcaccctcgccgactacaacatccagaaagaatctacccttcaccttgtgctccgt
ctccgaggcggtatgcagatctttgtcaaaaccctgaccggcaaaaccatcactctcgag
gtggagagctctgacacaatcgacaacgttaaagctaagattcaagataaggagggcatt
cctccagatcagcaaaggttgatctttgccggcaagcagctggaggacggccgcacttta
gccgactacaacatccagaaggaatctacccttcaccttgtgctccgtctccgtggtggc
atgcagatctttgtgaaaaccttgaccggcaagaccatcactctcgaggtggagagctcg
gataccatcgacaacgtgaaggctaagatccaggacaaggagggaattccccccgaccag
caaaggctgatcttcgctggaaagcagcttgaagatggtcgcaccctggccgattacaac
atccagaaggagtccacccttcatttggtgttgaggctgaggggagggatgcaaatcttc
gtcaagaccctcaccggcaagactattactttggaggtggagagctcggacacgatcgat
aacgtgaaggcgaaaattcaggacaaagaggggatcccgccggaccagcagaggctcata
tttgcagggaagcagctggaggacggacgcaccctcgctgactacaatatccagaaggaa
tctacccttcacctggttctccgcctccgtgggggtcagtga
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