Zingiber officinale (ginger): 122032314
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Entry
122032314 CDS
T08725
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122032314
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122032314
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122032314
03036 Chromosome and associated proteins [BR:
zof03036
]
122032314
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122032314
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122032314
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122032314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
TetR_C_16
Ax_dynein_light
Motif
Other DBs
NCBI-GeneID:
122032314
NCBI-ProteinID:
XP_042447530
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All DBs
Position
11A:93236313..93239010
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AA seq
487 aa
AA seq
DB search
MLNRFINFGSRKLPDPEAEEPPAVAVNHASRATAATPPPPAPSPAAAPVSPNIEVLPPFG
EVAAGERQALFLRKLQLCAVVFDFSDALSLRCARERETKRRAFQELVDFVQSGSGRLSEQ
VQEELVRTVAANIFRCLPPAAHENTGGDASADPEEENVFLDPAWPHLQLAYELLLRYVIS
TDTDTKIAKRFIDHSFVLRLLDLFDSEDPREREYLKTILHRIYGKFLVHRPFIRKAINNV
FYGFIFETERHNGIGELLEILGSVINGFTLPMKEEHKLFLVRALIPLHKTKAVSVYHQQL
AYCTTQFVEKDYKLADTVIRCLLKYWPVTNCQKEVLFLGELEEMLEATQPVEFQRIMIPL
FKRISCCLNSSHFQVAERALYFWNNDHIVTLIAQNRGVILPIIFEALEKNMQSHWNQVIN
ALTANVRKMFEDMDGNLFSECQQQYIEKEANANALKEQREVAWRQLEAVAVAVAAARAAG
EKMILVN
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaccggtttatcaatttcggaagccggaagctccctgatcctgaggcggaggag
ccccctgcggtggccgtcaaccacgcctctcgggccactgccgccacgcctcctcctcca
gcgccatcccctgctgccgcacccgtcagccccaacatcgaggttctcccgccattcgga
gaggtagccgccggggagcgccaagccctttttcttcgcaagctccagctttgcgccgtc
gtcttcgacttctccgacgctctctccctccgctgcgcccgagagcgggagacgaagcgg
cgtgcgtttcaggagctcgtcgacttcgtccagtccggctccggccgcctctccgagcag
gttcaggaggagctcgtccgcaccgtcgccgccaacatcttccgatgccttcccccggcc
gcccacgagaacactggcggcgatgcctccgccgatcccgaggaggagaacgtgttcctc
gatccagcgtggccccatctccagctcgcctacgagcttcttctccgctacgtcatctcc
actgacaccgacaccaagatcgccaagcggttcattgaccattcctttgtgctccgcctc
ctcgacctcttcgactccgaagacccccgcgagcgcgaatacctcaagaccatcctccac
cgtatctacggaaagttcctggtccaccgcccattcatccgcaaggccatcaacaacgtc
ttctacgggttcatcttcgagacggagaggcacaacggtatcggagagcttctggaaatt
cttgggagcgtcatcaatggctttaccctgcccatgaaagaggagcataagttgttcctg
gtgcgggcgctcatcccgctgcacaagaccaaggcggtgagcgtttaccaccagcagctg
gcctactgcaccacgcagttcgtggagaaggactacaagcttgcagacacggtgattcga
tgcctattgaagtactggccggtgaccaactgccagaaggaggttctgtttctgggggag
ttggaggagatgttggaggcaacacagcccgtagagttccagaggatcatgattcccttg
ttcaagaggatttcatgctgtctcaacagctctcacttccaggttgctgaacgggcttta
tacttttggaataatgatcatatcgtgaccttgattgcccaaaaccgtggtgtcatattg
cccataatattcgaagcgctggagaagaacatgcagagccattggaaccaagtgatcaat
gccctcacagcaaacgtgcgcaagatgttcgaagacatggacggcaatctcttttcggag
tgtcaacagcaatacattgagaaagaagcaaacgccaacgccttgaaagagcaacgagag
gttgcatggagacaactagaagctgtagctgtggccgtagctgcagctagagctgcggga
gagaagatgattctagtcaattaa
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