Zingiber officinale (ginger): 122034979
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Entry
122034979 CDS
T08725
Name
(RefSeq) tRNase Z TRZ1-like isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122034979
Enzymes [BR:
zof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
122034979
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
122034979
Prokaryotic type
122034979
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
122034979
NCBI-ProteinID:
XP_042450271
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Position
1A:138102107..138106367
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AA seq
299 aa
AA seq
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MGSRRSKADSEASAEQSSLVPRKKPLVIEGYPVEGLSIGGQETCVIFPSLKLAFDIGRCP
QRAISQEFLFITHGHMDHIGGLPMYVATRGLYSMKPPTIFVPVSIKEHVEKLFEVHRAID
QSELKHNLVALNVGEEFQLRNDLKVRAFKTYHVIPSQGYCIYSVKKKLKAEFCGLSGNEI
KSLRLSGVEITDTITTPEIAFTGDTMSDFVVDPDNSDVLNARILVMESTFVNDSMSVQHA
RDYGHTHLFEIASYENRFQNKAILLIHFSARYYPEEIEAAIAKMPPSFSGRLFALTNGF
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggggagtcgcagaagcaaagcggatagtgaagcaagtgctgaacagtcttcgttagtt
ccaagaaagaagccactggtgatcgaagggtatccagttgaggggttgtcaattggaggg
caggagacttgtgtcatcttcccgtcacttaagttggcctttgacattggtagatgcccg
cagcgagccatttcccaggaatttctgttcattacccatggccatatggatcacatagga
ggacttcctatgtacgttgctactagaggattatatagcatgaagcctccaactatcttt
gtcccagtgtctataaaagaacatgtggaaaaactgtttgaggtgcacagggcgattgac
caatctgaactgaagcacaatttagtcgcccttaatgtaggcgaagaatttcaattgaga
aatgatcttaaagttagagcattcaagacctaccatgttatacctagccagggttattgt
atctactctgtcaaaaaaaagcttaaggcagaattttgtggtctttctggaaatgagatt
aagagcttgcgactatcaggtgttgagattactgacacaataacaactcctgaaattgcc
ttcacgggagatacgatgtcagattttgttgttgaccctgacaattctgatgtacttaat
gcaagaattcttgtgatggagagcacttttgtgaatgactcaatgtcagttcaacatgct
agggattacggccacacccatttgtttgagatcgcaagttatgagaaccgattccaaaat
aaagcaattttgctcatccatttttcagctcgttattatccagaggaaatcgaggctgcc
atcgccaagatgcctccatcgttttctggtcgcctcttcgccttgacaaatggtttctaa
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