Zingiber officinale (ginger): 122038564
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Entry
122038564 CDS
T08725
Name
(RefSeq) adagio-like protein 3
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
122038564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122038564
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122038564
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_2
Kelch_1
Kelch_6
PAS_9
NANM
PAS_3
F-box-like
F-box
PAS
PAS_4
PAS_8
DUF1668
Motif
Other DBs
NCBI-GeneID:
122038564
NCBI-ProteinID:
XP_042454297
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Position
1A:181851574..181855607
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AA seq
618 aa
AA seq
DB search
MAAGAETGGGGEQKPLKRMKWSPDDEMEVEEEFEVVAEEEMVDLGRFYYPLTPSAFVVSD
AAQPDFPIIYVNSVFENATGYRADEVLGRNCRFLQFRDPRAQRRHPLVDPMVVAEIHRCL
EEGIEFHGEILNFRKDGTPLVNRLRLMPIYGDDGFVTHIIGIQLFSEANIDLNRLSYPVF
KHNSCIKSSNQDANSSISETDCIIRYQDYCGILQLSDEVLAHNILSRLTPRDVASIGSVC
TRMRQLTKNEHLRKVVCQNAWGREVTIRLELSTKKLGWGRLARELTTLEAASWKKFTVGG
RVEPSRCNFSACAVGNRLVLFGGEGINMQPMDDTFVLNLESTNPEWHRVKVTSSPPGRWG
HTLSCLNGSWLVVFGGYGRQGLLNDVFVLDLDAKQPGWKEVFGEAPPLPRSWHSSCTVDG
SKLVVSGGCTDAGVLLSDTYLLDLTREKPTWREIPSSWVPPRLGHTLSVYDKTKILMFGG
MAKSGTLRLRSCDTYSIDLEEEEPQWRQLGTNGFPGAGPPPRLDHVAVSLPCGRIIIFGG
SIAGLHSPSQLFLLDPLEEESTWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGRTGEEW
ILNELHELCLASRPDGDA
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggagcggaaacggggggaggaggggaacagaagccgctgaagcggatgaag
tggtcgccggacgacgaaatggaggtggaggaagagtttgaagtggtggcggaggaggag
atggtggacctcgggcggttctactaccccctcaccccctccgccttcgtcgtctccgat
gccgcccaacctgacttcccgatcatttacgtcaactccgtttttgagaacgccaccggg
taccgcgccgacgaggtcctcggaaggaactgccgattcttgcagtttcgtgatccacga
gcacaaagaaggcatcccctggtggatcctatggttgttgctgaaattcatagatgtcta
gaggaaggcatagagtttcatggagagattctcaactttcggaaggatggaactccattg
gtaaacagattgaggctcatgcccatatatggtgatgatggttttgtgacccacatcata
gggattcagttattctctgaagcaaacattgatctcaaccgtttatcctaccctgtcttc
aaacacaactcctgcattaagtcctctaatcaggatgcaaattcttctatttctgaaact
gactgtattatcagataccaagactattgtgggattctccagctctcggatgaagtcctt
gctcacaacattctgtcacgactaacacctagggatgtagcatctattggatcagtatgc
acaaggatgcgtcagctaacaaagaatgagcacttgaggaaggtggtttgccaaaatgca
tggggaagagaagtgaccataagattggaactgagcaccaaaaaattaggctggggcaga
cttgctagggagctaaccacactggaggcagcttcatggaagaagttcactgttggtggt
agagtagaaccttcccgttgcaatttcagtgcatgtgctgttggtaaccggttggttctc
tttggaggagaaggcatcaacatgcaaccaatggatgatacttttgtccttaatcttgag
tcaacaaatccagaatggcaccgtgtgaaggtcacttcttctcctccaggacgttggggg
catactctttcatgtctaaatggatcatggctagttgtcttcgggggctatggaaggcaa
ggattactcaacgatgtatttgtgttggatttggatgccaagcagccaggatggaaagaa
gtatttggtgaagctccccctttgcccagatcctggcacagctcttgcactgttgatgga
tcgaaactggttgtatcaggtgggtgtacagatgctggtgtgcttctgagtgacacctat
ctgctggatttgacaagagagaagccaacatggagggagataccttcttcatgggttccc
ccaagactcggccacacactttcagtatatgacaaaactaagattttaatgtttgggggt
atggcaaagagtggtacactaaggctgcggtcatgtgacacttacagtattgatttagaa
gaagaggagccacaatggaggcagcttgggactaatggtttcccaggtgcagggcctcca
cctagattggaccatgtagcagtgagtttaccctgtggaaggatcatcatctttggtgga
tcaattgcaggacttcactccccatctcagctcttcctcctggatcccctggaagaagaa
tcgacatggaggatcctcaatgtccctggtcagccaccaaagtttgcgtgggggcatagc
acttgtgtagttggagggacgagggttcttgttcttggcgggcgcacaggtgaagaatgg
attctgaacgagttacatgagctgtgcttggccagtagacctgatggagatgcataa
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