KEGG   Zingiber officinale (ginger): 122041376
Entry
122041376         CDS       T08725                                 
Name
(RefSeq) splicing factor 3B subunit 6-like protein
  KO
K12833  pre-mRNA branch site protein p14
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122041376
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zof03041]
    122041376
Spliceosome [BR:zof03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    122041376
 Complex B
    122041376
 Complex C
   U2 SnRNP specific factors
    122041376
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_10 RRM_7
Other DBs
NCBI-GeneID: 122041376
NCBI-ProteinID: XP_042456963
LinkDB
Position
2A:complement(83759830..83760721)
AA seq 125 aa
MATISLRKANTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGTNKDTRGTA
FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMAKKSDTKKKEEEITRLQEKYGIS
TSKDK
NT seq 378 nt   +upstreamnt  +downstreamnt
atggcgacgatcagccttcggaaggccaacacccgcctccccccggaagtgaatcgggtc
ctgtacgtacgcaacctcccattcaacatctccagcgaggagatgtacgacatcttcggc
aagtacggcgccatccgccagatccgcatcggaacgaacaaggatacccgcgggacggcc
ttcgtcgtctacgaggacatctacgacgccaagaccgccgtcgaccatctctccggcttc
aacgtcgccaaccgctacctcatcgtcctgtactaccagcaagccaagatggccaagaag
tccgacaccaagaagaaggaggaggagatcacgcgtctgcaggagaagtacggcatctcc
acctccaaagataagtaa

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