Zingiber officinale (ginger): 122045331
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Entry
122045331 CDS
T08725
Name
(RefSeq) ATP-dependent DNA helicase DDM1-like isoform X1
KO
K19001
ATP-dependent DNA helicase
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122045331
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122045331
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
DBINO
Motif
Other DBs
NCBI-GeneID:
122045331
NCBI-ProteinID:
XP_042461446
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Position
1B:complement(32852..43555)
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AA seq
772 aa
AA seq
DB search
MEGEMENRIKEETADSPKSVLEEEGICNVKSELAVSEENETPQINVEDDTCLPLELEAKN
GDTFLITETMEKEENLLRARAKEENLEQEVAENAWGSELRFSKLDELLTQTQLYSQFLLE
KMDAITFQNNSENTPEVENEAKGTKGNRARKRKATTHYNNRKAKTAVRAMLTRSQEAVTP
EDTSLTDEQRAEKEQAELVPLVTGGKLKHYQIKGVKWLISLWQNGLNGILADQMGLGKTI
QTIGFLSHLKGKGLDGPYMVIAPLSTLSNWVNEVSRFVPSMTAIIYHGSKKERMDIRRKQ
MPKDIGPKFPLIITSYEIALFDAKILAKYKWKYVVVDEGHRLKNNKCLLFRELRRLPMEN
KLLLTGTPLQNNLAELWSLLNFILPDIFSSHKEFESWFDFSGKGNSESQSEETEEKRKVQ
VITKLHSILRPFLLRRMKEDVEQMLPRKKEIILYANMTEHQKKIQGHLVNKTIEDFLEKE
SENVIWRSGMKGKLNNLLVQLRKNCNHPDILESPFDGSYFYPPVEKLLEQCGKFQLFDRL
LALLLAQKHKVLIFSQWTKVLDIIEYYLGEKGLEVCRIDGHVKLDERRIMIETFNNENSN
MSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTRPVHVYRLATSH
SVEGRIIKKAFGKLKLEHVVISQGQFQQERIKPNTLEESELLALLRDEEDPEDKLVQTDI
SDDDLLRVMDRSDLVDPKDANGASGTPLPLRGPGWEVVLTAKSGGVLSALGS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggagggggagatggaaaataggatcaaggaggagaccgccgattctccaaaatctgta
ttggaagaggaggggatttgtaacgttaaaagtgagctagctgttagtgaagagaatgaa
accccccagatcaatgttgaagacgatacttgtctgccgctagagcttgaggccaagaat
ggggatacttttcttattaccgaaaccatggaaaaggaggagaatttactacgtgctagg
gcaaaggaagaaaacttggagcaggaagtggcagagaatgcttggggctccgagctgcgt
tttagcaagttggatgaactgctaacacagactcagctttactcacagtttcttcttgag
aagatggatgccatcacatttcagaataattccgagaacactcctgaagtagaaaatgag
gccaaagggacgaaagggaatcgtgcacgaaagaggaaggcaaccactcattacaataat
agaaaagccaaaactgcagttcgagctatgctaacaagatcccaggaagctgttactcct
gaagataccagcctcacagatgagcagagggctgagaaagagcaagctgagcttgttccc
ctggtgactgggggaaaactgaagcattatcaaattaagggcgttaagtggttaatctca
ttgtggcaaaatggtctaaatggaatactagctgatcaaatgggtcttggtaaaaccatt
cagaccattggctttctttctcaccttaaaggaaaaggtttggatggaccatatatggtc
attgctcctctttctactctttcaaattgggtgaatgaggtctctaggtttgttccttcc
atgactgctatcatatatcatggatcaaagaaagaaaggatggatataagaagaaaacag
atgcccaaagatattggccctaagttccctctgataattacttcatatgagattgcacta
tttgatgcaaagattttagctaaatataaatggaaatatgttgttgtggatgagggacat
cggttaaagaacaataagtgcctcttgttccgagaattgaggcgattgccaatggaaaat
aagcttcttctgacagggacacctctgcagaataatttggctgaactatggtcattatta
aacttcatcctacctgatattttttcatcccacaaggagtttgagtcatggtttgatttt
tctgggaagggcaatagtgagagccagtcagaagaaactgaagaaaagaggaaggttcag
gtgatcactaagctccacagcatactacgccctttcctcttgcgaagaatgaaagaagat
gtagagcagatgcttccccgcaagaaggagataatcttgtatgccaacatgactgaacat
caaaagaaaatccaaggtcacttagtgaataaaactattgaagattttttggaaaaggaa
tcggagaatgtgatttggaggtctggaatgaaaggaaaactgaacaatttacttgttcaa
ctaaggaagaattgcaaccacccagatattttagaatctccatttgatgggtcttatttc
tatccaccggttgagaaactattagaacagtgtggaaaattccagttgttcgacagatta
ttggctttgctacttgctcagaagcacaaagttcttattttttctcagtggacaaaagtt
ttggacatcattgaatattacttaggtgagaaagggcttgaggtttgcagaattgatggc
catgttaaactggatgaaaggagaattatgatagagactttcaataacgagaacagcaat
atgagtatttttcttctcagcacacgagctggtggattgggcattaacttaactgctgct
gatacttgtatcttatacgatagtgattggaatcctcaaatggatctgcaggctatggat
agatgtcataggattggacaaacacgacctgtgcatgtgtataggttggcaacatcgcat
tctgtagagggtcggattatcaagaaggcttttggaaagttgaagttagagcatgtagtt
atttctcaaggacaatttcagcaagagaggatcaaacctaatacattagaggaatcagaa
ctactggcactgcttcgagatgaagaagatcctgaagataagctggttcaaactgacatc
agcgacgatgatctattgagagtcatggatcgcagcgatctagtagatccaaaggatgcc
aatggggcatctggtacccctcttcctctcagaggacctggttgggaggtggtattaact
gccaaaagtggaggtgtgttgtcggcgctcgggagctga
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