Zingiber officinale (ginger): 122045620
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Entry
122045620 CDS
T08725
Name
(RefSeq) chaperone protein ClpB3, chloroplastic-like
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
zof03110
]
122045620
Chaperones and folding catalysts [BR:
zof03110
]
Heat shock proteins
HSP100
122045620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
AAA_18
AAA_14
IstB_IS21
Zeta_toxin
AAA_7
TniB
AAA_28
Mg_chelatase
NACHT
AAA_25
AAA_24
ResIII
ABC_tran
Torsin
NBD_SMAX1
KIF9
Motif
Other DBs
NCBI-GeneID:
122045620
NCBI-ProteinID:
XP_042461855
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All DBs
Position
2B:44045060..44052931
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AA seq
985 aa
AA seq
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MTSVFCATNHSLRPLPPPSNACRSRFCSNALALHASFRCRASGKTIRALRWSDTLGRSDL
FLSKRVGRSGSVLRSVVIRCEAPKDGRITQQEFTEMAWQAIVSSPEVAKESKHQIVETEH
LMKALLEQKNGLARRIFSKSGVDNTKLLEATDRFIQRQPKVLGESVGSMLGRDLEALIQR
AREYKKEYGDSFVSVEHLVLGFAEDRRFGKQLFKDFQISLNNLKSALQAIRGRQNVIDQD
PEGKYEALEKYGKDLTAMAREGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKT
AISEGLAQRIVQGDVPQALMNRKLISLDMGALIAGAKYRGEFEDRLKAVLREVTESEGQI
VLFIDEIHTVVGAGATNGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRF
QQVYVDQPTVEDTISILRGLRERYELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDL
VDEAAAKLKMEITSKPTALDEINRSVLKLEMERLSLTNDTDKASKDRLNRLETELSLLKE
KQAELTEQWEHEKAVMTRIQSIKEEIDRVNVEIQQAEREYDLNRAAELKYGSLNSLQRQL
QEAEKDLIEYKSSGKSMLREEVTGSDIAEIVSKWTGIPVSKLQQSEREKLLFLEEELHKR
VVGQDPAVKAVAEAIQRSRAGLSDPNRPIASFMFMGPTGVGKTELAKALASYMFNTEEAL
VRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTETVRRRPYAVILFDEIEKAHSDVFNV
FLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMNDELESRDSTYEAIKQRVMDA
ARSIFRPEFMNRVDEYIVFQPLDREQINSIVKLQLERVQKRVADRKIKIQVTDAAVEFLG
SLGYDPNYGARPVKRVIQQNVENELAKGILRGDFKDEDSILVDTEVTVFSNGQLPLQKLV
FRKIDDADASSDASSSEGQEAFLPS
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgtgttctgcgccacaaaccacagcctccgcccccttccaccgccatcgaat
gcctgccggagccgcttctgcagcaacgcactcgccctccatgcctccttcaggtgtcgg
gcctccggcaagacaatcagggccttgagatggtcggacaccctcgggaggagcgatctc
ttcctgtcgaagagggtcgggcgctcgggtagcgtcttgaggtctgttgtcatcagatgc
gaagcgcccaaggatggaaggatcactcaacaagaattcactgagatggcttggcaagct
attgtttcatcaccagaagttgcaaaagaaagcaaacatcaaatagtggagactgaacat
ttaatgaaagcattgttagagcaaaaaaatgggcttgcacgtcgaatattttccaagtca
ggagttgataatactaagctactggaagctactgatagattcatccagcgtcagcctaag
gtcttgggcgaatctgttggtagtatgttaggtcgagatcttgaagctttaattcagcga
gccagggaatacaaaaaggaatatggtgactcttttgtatctgtagaacatcttgtactc
ggttttgcagaagatcggcgatttggaaaacaactcttcaaggattttcagatttcattg
aacaatttaaaatctgcccttcaagctataagaggacggcaaaatgtcattgaccaagat
cctgagggtaaatatgaagcattagaaaaatatggaaaagatttgactgctatggcacgt
gaagggaaacttgatccagtcattggaagggatgatgaaattcgtaggtgcattcagatc
ttatcaaggagaacaaagaacaatcctgtattgataggcgaacctggtgttggaaagact
gctatatcagaagggttggcgcaaaggatagtgcaaggggatgttccacaggctttgatg
aaccgcaagctgatttctcttgacatgggtgcactcattgctggggcaaagtatagggga
gaatttgaagatagactaaaagctgttctgagagaagtgacggaatctgaaggccagata
gtccttttcattgatgagattcatactgttgtgggggcaggtgccacaaatggggccatg
gatgcaggtaaccttttgaaaccaatgcttggacgtggagaactgcgctgcattggtgcc
acgactcttgatgagtatcgcaagtatattgagaaagatccagctttggagcgtcgtttt
cagcaagtttatgttgatcagcctacagtagaggatacaatatcaatattacgtggattg
cgtgagagatacgagctacatcatggtgtccgcatatctgatagtgctctcgtggaggct
gctattctttctgaccgctatataagtggccggtttttgccagataaagctattgacttg
gttgatgaagcagctgccaagctaaagatggagattacatctaaaccaactgctctggat
gaaattaatcgatctgtattgaagttggagatggagcggctctcattaactaatgatact
gataaagcttcaaaagataggttgaaccgccttgaaacagaactgtcactgttgaaggag
aagcaggctgaacttactgagcagtgggaacatgagaaagcagtaatgacaagaattcaa
tcaataaaagaagagattgatagggtgaatgtagaaattcagcaggcagagcgtgaatat
gatcttaatcgggcagctgaattgaaatacggaagccttaattctctacaacgtcagctt
caagaggcagaaaaggacctaattgagtataaaagttcaggcaaatcaatgcttagagaa
gaggtaactgggagtgacattgcagaaatagtcagcaaatggactggcattcctgtatct
aagctgcaacaatcagagagagagaagctactgtttctggaagaagaactccacaagcga
gttgttggtcaagacccagctgtgaaagctgttgctgaggctattcaacggtccagagct
ggtctctcagatcccaaccggccaatcgctagtttcatgttcatgggtccgactggagtt
ggcaagacagaattggcaaaagcacttgcttcttatatgttcaacactgaagaagcttta
gtgagaatagacatgagcgagtacatggaaaagcatgcagtgtcaagattgattggagcc
ccaccaggctatgttggatacgaggaagggggacagttgactgagactgttcgcagaagg
ccttatgcagttatattgtttgacgagatcgagaaggcacattctgatgtgttcaatgtt
ttccttcagattctggacgatggtagagtgactgattcacagggccggacagtgagtttc
acaaacacagttataattatgacatctaatgttggttcccaatacatattaaatatgaac
gatgaattagaatcgagggattccacatatgaggctatcaaacagagagtgatggatgct
gctaggtcaatctttcggcctgaattcatgaatcgtgttgatgagtatattgttttccag
cccttggatcgcgagcaaataaacagtattgtgaagttacagttggaaagagtgcaaaag
cgagttgcagatcgaaagatcaaaattcaggtgactgatgccgccgttgagtttcttgga
agcctcgggtacgatcccaactatggtgcaaggccagtgaagcgtgttattcagcagaac
gtggagaacgaactggcaaagggcattctgaggggagacttcaaggatgaggatagtatc
ttggtggacactgaagtcacagttttctccaatggtcagcttcctttgcaaaagttagtg
tttcgtaagatagacgatgcagatgcttcttcggatgcgtcttcatctgagggccaggag
gccttcttgcctagttga
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