Zingiber officinale (ginger): 122047642
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Entry
122047642 CDS
T08725
Name
(RefSeq) synaptotagmin-1-like isoform X1
KO
K28063
extended synaptotagmin
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122047642
Membrane trafficking [BR:
zof04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
122047642
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
SMP_LBD
SMP_MUG190-like
NT-C2
Motif
Other DBs
NCBI-GeneID:
122047642
NCBI-ProteinID:
XP_042464980
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Position
2B:145178402..145182903
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AA seq
577 aa
AA seq
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MGLFLFRREWWRGSGRKMEELKIGLLSTALGFFGFGVGLTVGAVVGFYLFIRTQPSDVED
SKICAHVENDPEFLERILPEIPLWVKYPDYDRVGWLNKFMELMWPYLNEAICKTAMQSAE
PIMAEVAAKYKIKSVKFETFTLGSLPPSLHGMKVYISEENELILEPSLKWAGNPNIIVVA
RAYGLRLTVQVVDLQIFALPRLTLKPLVPSFPCFANIYMGLMEKPHVDFGVKLSRADLMA
IPGLYIFVQETIKDQVANMFLWPKTLEVPILDVSKALKKPVGILYVKVIRAYELPKEDLF
GKSDPYVKLRLSDHKLPSKKTSVKRRNLEPEWNEEFKFVIKDPESQVVELNVYDWEQVGR
HKKMGMNVIKLNEVIPNKSTTLTLDLLKDFKSEDIPSENSQGQIVVEVNYKPFKEEEHEE
DESSGEEDEIEDEVGPESEDEVADKEEKTPKSAPPGGGLLIVIVHEGKKLEGKHHINPYA
RVTFRGEKKKTKHKKHNRDPRWKEEFLFVCEEPPVHDKLLVEVFSKAIGIGIHYSKESLG
YVTVDLADVVNNKRTNEIYHLIDSKNGQIQVELQWNT
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgttcctcttcaggagggagtggtggaggggttctgggcggaagatggaagaa
ttgaagatagggcttctgagcaccgctttaggcttcttcggctttggggtagggctgacg
gtgggcgccgtcgtcgggttctacctcttcatccgcacccaaccctccgatgtcgaggat
tcaaaaatttgtgcacatgttgaaaatgatccagaatttctggagcgcattctcccagaa
attcctctctgggtgaagtaccccgattatgatcgagtgggttggttaaataaatttatg
gaactgatgtggccatatcttaatgaggctatctgcaaaactgcaatgcaatctgcagag
ccgattatggcagaggttgctgcaaagtacaaaatcaagtctgttaaatttgaaacattc
actcttggttcactacctccaagtcttcacggaatgaaagtttacatctctgaagaaaac
gaactcatattggaaccttcacttaaatgggctgggaatcctaatatcatcgttgttgct
agagcatacggattgagattaactgtgcaggtggtagatctgcagatctttgcacttcct
cgtcttactttaaagcccttggtccctagctttccttgttttgcaaacatctacatgggt
ctcatggagaagccacatgtggattttggagtaaaactttcgagggctgatctcatggca
attcctggtctttacatatttgtgcaggagaccatcaaagatcaagttgcgaatatgttc
ctttggccgaaaacccttgaagtgcctattctggatgtttcaaaagccttaaagaagcct
gttggcattctctatgtcaaagttatcagggcttatgagctgccaaaggaagacttattc
ggaaaatcagacccatacgtgaaattgaggctttctgaccataagcttccgtctaaaaag
acatcagtgaaacgccgaaacctggaacccgaatggaatgaggaattcaaattcgttata
aaagatccagaaagtcaagtggtggagctcaatgtctatgattgggaacaggtaggaaga
cataaaaaaatgggaatgaatgtcattaagttgaatgaagttatccccaacaaatcgacg
actctaacactcgatcttctcaaggatttcaaaagtgaagacattccgagtgaaaattca
caaggacaaattgtcgtcgaagttaattacaaacctttcaaggaagaagaacatgaagaa
gatgaaagtagtggtgaagaagatgaaattgaagatgaagttggccctgaatcagaagat
gaagtagcagataaagaagaaaagacacccaagagcgcccctcctggcggcggtttgctt
atcgttattgtccacgaaggtaaaaaactcgaggggaagcaccatataaatccttatgca
cgagttacctttagaggagagaaaaagaaaaccaagcacaaaaagcataacagagatcca
agatggaaggaggaattcctttttgtttgcgaggaacctccggtccacgacaaattacta
gtcgaggtattcagtaaggcaataggtattggcatacactactctaaggaaagtttggga
tatgttaccgtcgacctcgcagatgttgtgaacaacaagagaaccaacgaaatctaccat
ctgatcgactcgaaaaatggccaaattcaggtagagttgcaatggaacacttga
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