Zingiber officinale (ginger): 122052537
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Entry
122052537 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC122052537
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122052537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
122052537
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
122052537
DNA repair and recombination proteins [BR:
zof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122052537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
122052537
NCBI-ProteinID:
XP_042470040
LinkDB
All DBs
Position
3A:139262886..139265069
Genome browser
AA seq
383 aa
AA seq
DB search
MCHSKIRSSDAASPAIDGRQVLQPPSNRISPLESPRPVKHTLQKSTSLPTSFANAAAAGV
FSIDHPSPPIPYTKITATALLKRRGEPIGLDSSTEKLRTPKASTWSPPAAARKEKKNKKP
EKVSGEIRLADFSSGLLRNRVAGSVAAAQREHAALVQAQRKLRIAHYGRTPAKIEELAGS
IECPDIAMSASQEEKKCSFITPSSDPVYAAYHDEEWGVPVHDDRMLFELLVLAGAQVGMD
WTTILKKRNEFRVAFAEFDAESVSKFTEKQMVSISVELKLDLGRVRGIIENSKRILEVKR
NFGSLDKYLWVFVNHKPISTNYKSCRKIPVKTSKSESISKDMVRRGFRFVGSTIVHSFMQ
AAGLTNDHTISCPRHLHCSRFAN
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtgccactccaagattagatcatccgatgccgcatcgccggcgatcgacggcaggcaa
gttcttcagccgccctccaaccgcatctctcctctggaatctccccgcccggtcaagcac
actctgcagaaatcgacttctctccccacctcattcgccaacgctgcagccgccggcgtc
ttttccattgaccacccatcgccgccgataccgtatacgaagattacggcaacggccctt
ctcaagcggaggggcgagcccatcggcctcgactctagcaccgagaagctccgcacgccg
aaggcctcgacctggtcacctccggcggcggcgaggaaggagaagaagaacaagaagcca
gagaaggtgagtggagaaatccggttggcggacttctcttcgggactgctgcgcaacagg
gttgccggaagtgtcgccgctgcgcagagggagcacgccgcgctcgtgcaagcccagagg
aagcttcggatcgcccactacgggaggactccggccaagatcgaggagttggcgggttct
attgagtgtcccgacattgccatgagcgcctcccaagaagagaagaagtgcagcttcata
acaccgagttcagatcctgtgtatgctgcttatcatgatgaggaatggggagttccagtt
catgatgacaggatgttgtttgagttgcttgttctagcaggagctcaagtggggatggac
tggactactatactgaagaagaggaatgaattcagggtggcatttgctgaatttgatgca
gagtctgtctccaagttcacagagaagcagatggtttccatcagtgtggaactgaagctg
gatttaggaagagttcgaggaattatcgaaaattctaagagaattttagaggtcaagaga
aactttggctccttggataagtatctgtgggtcttcgtcaaccacaagcccatctcaaca
aactacaagtcctgcagaaaaatcccagtcaagacctccaagtcggaatccatcagcaag
gacatggttcgccgtggcttccgcttcgtcggttcgacaattgttcattccttcatgcag
gctgctggcctgaccaacgaccacaccatctcctgccctcgccacctccattgctctcgt
tttgccaactga
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