Zingiber officinale (ginger): 122053745
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Entry
122053745 CDS
T08725
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
122053745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122053745
Transcription factors [BR:
zof03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
122053745
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
122053745
NCBI-ProteinID:
XP_042471659
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Position
3A:53427199..53428954
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AA seq
338 aa
AA seq
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MGEALSDIFEQTDMIGGTLPEDLFSILDTFEDTVSSAKERASIEGSNFSPKVTLVSPRVG
SNSRPLESDEGQAPKKRKLDSPRAPADLGNQDGQQKTTHITVERNRRKQMNEHLSVLRSL
MPCFYAKRGDQASIIGGVVDYIKELQQVLQSLEAKKQRKAFSEVLSPRPVCSSPRPPPLS
PRMALPISPRTPQPGSPYMPRIQPQQQPQQQQQQQQQQGYLSPTVLHAAESSPSFNSATT
TATNAEIVAAANSQSPVAKVEVKFSGPNVILKTISHRIPGQAFKIITALEGLAMEILHVS
ISTNVSDDIMLNSFTIKIGIECELSAEELAQEIQQTFL
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagccttgtccgatattttcgagcaaactgatatgataggcggcaccttgccg
gaggacttatttagcatcctcgacacgttcgaggacaccgtcagtagtgctaaagagaga
gcttccattgaagggagcaactttagtcctaaagtgactctggtttctccccgagttggc
tcaaactccaggccgctcgagtccgacgagggccaagctcccaagaaacgcaagttggat
tccccacgggctccggcagacttgggcaaccaggatggacagcagaagacgacgcacatc
actgtggagcgcaaccggaggaagcaaatgaacgagcacctgtcggtgctgcgctccctg
atgccttgcttctatgccaagagaggagatcaagcatccatcatcggaggagtagtggat
tacatcaaggagcttcagcaagtgttacagtcgctggaggccaagaagcagagaaaggcc
ttcagtgaggtgctaagtccaagaccggtctgttccagccccaggccaccaccattaagc
cctagaatggccctcccaataagtccaagaactccccagccgggaagcccatacatgcca
aggattcagccacagcagcaaccgcagcagcagcagcagcagcagcagcagcagggctac
ctctcccctacggtactgcatgcagcagagtcatctccttcctttaatagcgccaccacc
accgccacaaacgccgagatcgtggcagcagccaactcgcagtcgccggtggcgaaggtg
gaggtgaagttctcggggccgaatgtgatcctgaagacgatctcgcatcgcatccccggg
caagctttcaagataatcacggcgctggagggcctcgctatggagatactccatgtgagc
atcagcaccaatgttagcgacgacatcatgctcaactcgttcaccattaagatcggaatt
gaatgcgagctgagtgccgaagagcttgcgcaagaaatccagcaaacgttcttgtaa
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