KEGG   Zymoseptoria tritici: MYCGRDRAFT_100547
Entry
MYCGRDRAFT_100547 CDS       T02285                                 
Symbol
SWDC2401
Name
(RefSeq) WD40 repeat protein
  KO
K14963  COMPASS component SWD3
Organism
ztr  Zymoseptoria tritici
Pathway
ztr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ztr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    MYCGRDRAFT_100547 (SWDC2401)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ztr03036]
    MYCGRDRAFT_100547 (SWDC2401)
Chromosome and associated proteins [BR:ztr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     MYCGRDRAFT_100547 (SWDC2401)
    NSL complex
     MYCGRDRAFT_100547 (SWDC2401)
   HMT complexes
    COMPASS/SET1 complex
     MYCGRDRAFT_100547 (SWDC2401)
    COMPASS/SET1 complex (yeast)
     MYCGRDRAFT_100547 (SWDC2401)
    MLL-HCF complex
     MYCGRDRAFT_100547 (SWDC2401)
    MLL3/MLL4 complex
     MYCGRDRAFT_100547 (SWDC2401)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     MYCGRDRAFT_100547 (SWDC2401)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WDR55 Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_IFT122_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_VPS8 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C eIF2A Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_ACSF4 WD40_like Beta-prop_DCAF12 Tricorn_2nd RMC1_N Beta-prop_NUP159_NUP214 Beta-prop_IFT80_2nd Beta-prop_NOL10_N VID27 Tricorn_N Beta-prop_EMC1_N Cytochrom_D1 VPS8_N
Other DBs
NCBI-GeneID: 13401689
NCBI-ProteinID: XP_003851554
JGI: Mycgr3_100547
UniProt: F9XDP4
LinkDB
Position
6:1708853..1710209
AA seq 336 aa
MTLRGHKRGVAAVKFSPNGKWIASCSADSTIKIWDSQTGALSQTLEGHLAGISTIAWTPD
SKVIASGSDDKIIRLWDISTGKALPSPLVGHHNYVYSIAFSPKGNMMVSGSYDEAVFLWD
VRAARIMRSLPAHSDPVSGVDFVRDGTLVVSCSSDGLIRLWDTSTGQCLKTLVHEDNAPV
TSVKFSPNGKFVLAATLDSCLRLWDYVNGRVVKTYQGHKNSKFSISTCFGTEDGKTHLWD
VSSKETLQVLDGHEGVVLGVDVGLEDQRLATCGVDKTIRIWRRIPVPSDATNGDGSGDGN
VNNNGNGNVNGDHAATGAALSDDERVRESDIGDSTA
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgacgttgcgaggacacaagcgcggtgtggcagcggtcaagttctcacctaatgggaaa
tggatcgcaagttgctcggcggacagcactatcaagatatgggacagccagactggagcg
ctttcacagaccctcgaaggacatctcgcaggcatcagcacgatagcatggacaccggac
tcgaaagtgattgcatcgggctcggacgacaagattattcgattatgggatatttccacc
ggcaaagctcttccttcaccattggtaggacaccacaattatgtctacagtatcgccttt
tctccgaaagggaacatgatggtctcaggatcctacgacgaagcagtgttcctctgggat
gtgcgtgcagcacggatcatgcgaagtctccctgcgcactctgatccggtctctggtgtt
gatttcgtgcgcgacggaacacttgtggtgagctgcagcagtgacggtttgattcgactg
tgggacaccagtaccggccagtgcttgaaaacgctagtccacgaagacaatgcacctgtc
acgagtgtgaagttctcgccgaatgggaagtttgttctcgctgctactctggattcatgt
ctacgcctatgggactacgtcaatggaagggtcgtgaagacatatcagggtcacaagaac
agcaagtttagtatcagcacatgtttcggcactgaagacgggaagactcatctttgggat
gtctcctcgaaagagaccttgcaggtactcgatggacacgagggcgtggtgctcggcgtg
gacgttggactggaagaccagcgactggcaacatgcggtgttgacaagacgatcaggata
tggcggcggataccagtgccttccgatgcgacgaatggcgacggcagtggcgacggcaat
gtcaataacaatggcaatggcaatgtcaacggcgatcatgcggcgacaggagcggctctc
tcggacgatgaacgagtgagggagtctgatattggagattcgacggcatga

DBGET integrated database retrieval system