Zymoseptoria tritici: MYCGRDRAFT_90353
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Entry
MYCGRDRAFT_90353 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYCGRDRAFT_90353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_90353
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MYCGRDRAFT_90353
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
MYCGRDRAFT_90353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_HEAT
CNOT1_TTP_bind
ARM_Cnot1
Motif
Other DBs
NCBI-GeneID:
13395882
NCBI-ProteinID:
XP_003854713
JGI:
Mycgr3_90353
UniProt:
F9X203
LinkDB
All DBs
Position
2:209087..216152
Genome browser
AA seq
2296 aa
AA seq
DB search
MPSNWMLGRSLLKKHLQLHLTRPSQPPHQYLAYGRHFRIISSEPQGARRGLTPISTTSTS
SAGLVHPSSTSGSPLRSQFSPSLSAAQRQVTSRQSSTSSTSSYVSPHPGPRNVRSITSSG
SPRLSSSLASLSVGGASTAGGPSRLARHSPSVSIPASTGSSPATTGPHVQLSSLVVTQLN
ILLSTIKDDSDRVKWETQADKIRKLVHDSGMELFTTYFRRLLQSNASTIFPGTPRAPAAG
EKPGSYQLLLEEMQKLPRDPQQADKIAQSLDTTEGDLFRDFDLSTFIEHFRLDPVAKILL
VQSCRTTSKADLRSKADAILTANIQTFLSTIASPQTADAEQELPPLVLASIVERLIKLPP
RNWGEEQRENFFYAIRVRYIQRLGTRVPPPVETAMFLDELLAPTQDNRLAKTIEQTGASA
TASLEACKDMLGKVETRDISYPQIANALLLMVIAQNGDSFNPGVFVEAVRHHRAGQKIDW
TDVVQEFDKEHLRITKKQFLALYNALLPLAREYANFDIQTLWGGQWQYPEAQLSFVVAFL
STTSEELDVMQIPNLRQAFDLTDFATASDSVRAFAEQAIKHPLVSRDATEALFTMIFRSQ
ESYNLAQMLGIPDTVINQNMTIFVCAASAVPKPWAPLQDQALKQLFYPFLLKQHDNHDFV
MHSLWQHDKSWIATRMVEFYSTDSMLLSLIFEHALEHGWLELLLTIQGTSFSVDLAMYAH
GKGHCNLEEWAQQHVAQYGPPNFARAIMDFLKAKMDDETLVQRERTPPSTPPLTVKTVHA
LLLIIAEAVQEEGVGQLYRNCLQLYPRLFNYGEDDDRDTIIDANGARSNGLPEDATKDME
ERYKDMYGGTTTPDTLVADLNRLKVSAEPADQELFAAMLFGLFEEYNCFGEYPNEALATT
AVLFGGLVSYHVLSGIPEQAAIFMILEAVSEYGPEDPMYRFGLQALLHVLPRLKEWPRLV
ERILQTPSLRGTPAIAAAENAAKELQQEHVELNGDGANGITNGVFDDESVDDSTPPPFNA
IQIDPPSRTDYYEDPDEDVSDKVMFVLNNVSKRNFDEKFKEIEGALEEKYTQWFAHYLVE
DLAKSQPNFQWLYLQLLENFNRKLLWNEVLRETYISCAKMLNSQSTMDNQHERATMKNLA
GWLGQITLARDQPILHRNLSIKDLLIEGYDSQRLLVAVPFACKALFQAAHSKVFKPPNPW
ISELLGLFSELYHFMDLKLNMKFEIEMLCREFGVDIKKVEPLEIIRGRPTLEQTTAMLQQ
YIPDGGPDAFGDMALMGLSKRGPNERFSPDAVIQAVPDLGNMLQIPTAVGNITQQQLRNI
FVNAAQQAIYEIIAPVVERSVTIASISTSELIQKDFITEGDEEKMISSAHTVVKALSGSL
ALVTCKEPLRMSITNNIRILASRSLPEQLPEGQILMFVNDNIDTVCSLVESAAENHSLAE
IDLQLQSAREDRRLHNEQRPNEPFAIAPVSRWSTLIPEPFRQDQNGLNRQQLALYDDFGR
QARIAPTAHATNASQDSNRQLPDVLSDGYLPSLTTPAEAPAMPRQTQQQRIPGMQAGPPQ
HQINGYMDSGVVAARIIELMQDLQQCSREATEEHIGEIGEGSAIRRIYGELVGLIESTSP
AQRDTLATGAGGHCLGVIYADAQKRLEIEVFVRLLMQLCRMSVSAGRQVTMQLATSEDDR
IFNAAATASLHNEGLMDLQHIDTQVSKAIRSRREMVLPFLSDILDEMLLGESPVALRTDF
VLSYEALGQWLNEDSDLQLGKEIMTKLQTPARHINGMPSPESDTNKNDQQEYLFEEWIRL
QRKEVPERSFLAFAQQLHEKHVLSGPEDAMTFFRSCLEMSCAAFDRISNMPYATQDQAYV
AIDALAKLVVVMVVFQEAPQNDPHAKKAKSLEAMLRLVILVMNDHHNKQREHWNGRVYFR
LFSTLLCELHDHRDQLSPEQEWDMHKAFATALLILQPRYFPGFMYAWLALLSHRLFVPAF
LTGPNAQKRAGGWNIFTKLITALFLNLGDLLCVPDSPAVAQDFYRGVLRFFTMLHHDFPD
FLIQNHTVLNASVPLQCLQLQNIVNSAVTRAVFNEQPDPFTPGLKINRLEQVRQHPLYQP
DYTEFMEDVNILAEVERIAGNRGDESDFDTVLAQIDPADGHINALAVNALVVYVGIQQTN
VASVFSSASSGARLLERLLRVCSPKARYHLVSAMTNQIRYVNAMTHYFSTAMQHWFSTGS
QEVQEQIMRVLCERLMVPRPHPWGLIVMMLELVKNETNNIWSLPWIKTAPQVESMLLNLA
HSQDQRQARSPMGAMM
NT seq
6891 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcaattggatgctcggtcgctccctcctcaagaaacatctacagctgcacctc
acccgaccatcacaacctccacatcagtacctcgcatacggccgccacttccgaataatc
tcgtccgaaccgcagggtgcgcgtcgcggtctgacgcccatttctaccaccagcacatct
agtgctggcctcgtacatccttcgagcaccagtggcagtccattgcgctctcagttctca
ccatcactctccgccgcccagcgccaggttaccagccgacagtcctcgacttcatcgacg
agctcatacgtctcaccacatcccggtcctcgaaacgtccgatcaataacatcctccgga
agtccgcgactgtcatcctccctcgccagtctgtcggtcggtggtgccagcacagccgga
ggtccttcacggctcgcgcgccattcaccctcggtttcaatcccagccagcaccggttca
tctccagccacaacggggcctcacgttcagctttcaagcttggttgtcacgcaattgaac
atcctcctgagcaccatcaaagacgactcggatcgtgtcaagtgggagacacaggcggat
aagatcaggaagctggtccatgacagcggcatggagcttttcacaacatacttcaggcgt
ctgctgcaaagcaatgcgtcaacaatattccccggcacgccacgtgcgccggcggcgggc
gagaagccaggcagctaccagcttctgctagaggagatgcaaaagctgcccagagatcca
cagcaggcggacaaaatcgcacagtccttggacaccaccgagggcgacctcttccgcgat
ttcgacctttcaacattcatcgagcacttccgtctcgaccctgtggccaaaatcctacta
gtccagtcgtgccggacaacatcaaaagctgacctgcgctcgaaagctgacgcgatcctt
accgccaatatccaaacattcctctccaccatcgcatccccacaaaccgccgacgccgag
caagagcttcctcctttggtactcgcctccattgtcgagcgtctaatcaagctaccacca
cggaattggggtgaagagcaacgcgagaatttcttctatgcgattcgggtcagatacatt
cagcgcctgggtactcgcgtgcctccacccgtcgagaccgcaatgttcctcgatgagctt
ctcgcgccaactcaggacaatcgcttggccaagacaatcgagcagacaggcgcctctgct
actgcgagtttggaggcttgcaaagacatgcttggaaaggttgaaacccgcgacatctca
tatcctcaaatcgccaatgctcttctcctcatggttatcgcacaaaacggcgacagcttc
aacccaggtgtcttcgttgaagccgttcgacaccatcgtgcaggtcagaagatagattgg
acggacgtcgtgcaggaatttgacaaggaacatctgcgaatcacgaagaagcaatttctc
gctctgtacaatgcattgctgccgctggcacgagagtatgccaacttcgacatccagacg
ctttggggtggtcaatggcagtaccccgaagctcagctcagctttgtcgtggcattcttg
tcgaccacatcagaggagttggatgtgatgcagattccgaatctgcgccaagcgttcgat
ttgaccgacttcgcaacagcgtcggacagcgtgcgtgcattcgctgagcaagccatcaag
caccctctggtctcccgcgatgcaaccgaagcgttgttcacaatgatcttccgctcgcag
gagagctacaacctggctcaaatgcttggtatccccgacacagtcatcaaccagaacatg
acaatctttgtgtgcgctgcttctgcggttccaaaaccatgggcaccgctccaggatcag
gcgctgaagcagctcttctatccattccttctgaagcagcacgacaatcacgatttcgtc
atgcactcactctggcagcacgacaagtcatggatcgctacaagaatggtggaattctac
tcgaccgattcaatgctcctaagcttgatcttcgaacatgcccttgagcacggttggctc
gagcttcttctcacgatccaaggcaccagcttttcagtcgaccttgccatgtacgctcat
ggcaaaggccactgcaacctcgaagaatgggcacagcagcacgtcgcgcaatatggacct
cccaacttcgcccgtgccatcatggacttcttaaaggcaaagatggatgacgagaccttg
gtgcagcgcgagcgaactccaccatcaacacctcctttgactgtcaagacagtgcacgca
ctgctgctcatcatcgcggaagccgtgcaggaggaaggcgttggccagctctatcgtaat
tgccttcagctctacccgcgcctgttcaactacggtgaggacgacgacagggacacgatc
atcgatgccaacggagcgaggagcaatggcttgccggaagacgccaccaaggatatggag
gagcgctacaaggacatgtatggcggcacgaccactccggacactctggtggcagatctg
aaccgtctcaaggtgtctgccgagcctgcggaccaagagctgttcgcagcaatgctgttt
ggcttgttcgaagaatacaactgcttcggcgagtaccctaatgaggcactggcaacgact
gcggtcctcttcggcggtctggtgtcataccatgtactgtctggcattccggagcaagct
gcgatcttcatgattcttgaggctgtctcggagtacggtcctgaagatccgatgtacagg
ttcggactgcaggctctcctgcatgttcttcctagactcaaggaatggccgcgactggtc
gagcgaattttgcagactcccagtctacgaggcacaccagcgattgctgctgctgaaaat
gcggcgaaggagttgcagcaagagcacgtcgagctgaatggtgacggagctaatggcatc
acgaacggcgtcttcgacgatgagtctgtagatgactcgacgcctcctcctttcaacgcc
attcagatcgatccgccctcccgaacggactactacgaggatccagacgaagacgtttcg
gacaaagtcatgttcgtgctcaacaatgtctccaagcgcaacttcgatgagaagttcaag
gagatcgagggcgctctggaggaaaagtacactcaatggtttgcccactacctcgtcgaa
gatctcgcaaaatcgcagccgaacttccaatggctttacttgcagctgctcgagaacttc
aaccggaaactgctttggaacgaggtcttgcgagagacgtatatcagctgcgccaagatg
ctcaactcccagtctaccatggacaatcagcatgagagagctacgatgaaaaatctcgcc
ggctggctgggtcaaatcacattggcgcgcgatcagcccattcttcatcgcaacttgtca
atcaaagatctcctgattgagggctacgacagccagcgattgcttgtggcagtcccgttc
gcatgcaaggctcttttccaggcagcacactcgaaggttttcaagcctccgaacccttgg
atttccgagctcttgggtctcttcagcgagctctaccacttcatggatttgaagctcaac
atgaagttcgaaattgagatgctgtgtcgcgaatttggcgtggatatcaaaaaggtcgaa
ccacttgagatcattcgtggacgcccaacactggaacagaccacggcgatgctgcaacaa
tatattccagatggcgggcctgacgctttcggagacatggctcttatgggcttgtccaag
cgagggccgaatgagcgcttctctccagacgcggtcatccaagcagttccggatcttggt
aatatgctgcagattccgactgccgtgggcaacatcactcagcaacagctacggaacatc
tttgtcaacgccgctcaacaagctatctacgagatcattgcgcctgtggtcgagcgttcc
gttaccatcgcatcgatctcgacttctgagctcattcagaaggacttcatcacggagggc
gacgaggagaagatgattagctcagcgcacaccgttgtcaaggcactgtccggtagtctc
gcacttgtaacttgcaaggagccgctgcgcatgagcatcaccaacaacattcgcattctg
gcgtcgcgcagcctgcccgaacagctacctgaaggccagattctgatgtttgtcaacgac
aatatcgacacggtctgcagtcttgttgagtcagctgccgagaaccactcgttggccgag
atcgacttgcaactccagtcagctcgcgaggatcgcagacttcacaacgaacaacggcca
aatgagccattcgccatcgctcctgtcagccgctggtctactctcattcccgagccattc
cgtcaagaccagaacggcttgaacagacagcaactggcgttgtacgacgactttggtcgc
caagcacgcattgcaccaacagcccacgccacgaacgcttctcaggacagcaatcgccag
cttcctgatgttctgtctgatgggtacttgccgagccttacgaccccagccgaggctcca
gcaatgcctcgtcagacccagcagcagcgtatcccgggaatgcaggccggtccacctcaa
catcagatcaatggctacatggacagcggtgttgttgctgcgcggatcatcgagcttatg
caagatcttcagcaatgctcacgagaggccacagaggagcacatcggagagattggtgaa
ggctcagcgattcgccgcatctatggcgagcttgtaggcctcatcgagagcacttctccg
gcgcagcgagacactcttgccacgggtgccggagggcactgcctcggcgtcatctacgcg
gatgctcagaagcgcctggagattgaagtgtttgtgcgcttgcttatgcagctttgccgg
atgtcggtctctgctggtcgccaggtcacaatgcagcttgccacctccgaggatgacaga
atcttcaacgcggcggctacagcatctctgcacaacgaaggcttgatggacttgcagcac
atcgatacccaagtgtcaaaggctatcaggtctcgccgcgagatggtgctgccattcttg
tcagacattcttgatgagatgcttctcggagagtctccggtggcattgcggaccgacttc
gtcctcagctacgaagcgcttggccagtggctcaacgaagactcggacctccagctcggc
aaggagatcatgaccaagcttcagactcctgctaggcacatcaacggcatgcccagcccg
gaatccgacaccaacaagaacgatcaacaggagtaccttttcgaagaatggatccgactg
cagcgcaaggaagtgccggagagatccttcctcgctttcgctcagcagctgcatgagaaa
catgttctttcaggacccgaagatgctatgaccttcttccgctcgtgtttggaaatgtca
tgcgcggcgtttgatagaatcagcaacatgccatacgccactcaagatcaggcatatgtc
gctatcgatgctcttgccaaactggttgtcgttatggtcgtctttcaggaggctccccag
aatgatccgcatgccaaaaaggccaagtctttggaggccatgcttcgcctcgtcatcctg
gtaatgaatgaccaccacaacaagcagcgcgaacactggaacggcagagtctacttcaga
ctgttttctaccttgctctgcgagcttcacgatcatcgcgaccagctctcgccagaacag
gaatgggacatgcacaaggcgttcgcaacggcactgctcattcttcagcctcgatacttc
ccaggcttcatgtatgcgtggttggcacttttgagccaccgattgttcgtgccggccttc
ctgactggaccgaacgcccagaaacgcgctggtggatggaacatctttacgaagctcatc
accgcgctcttccttaatctgggagatctgttgtgcgtgccagactcgcccgctgtcgcg
caagacttctatcgcggtgtcctgcgcttcttcacaatgctccaccacgactttcctgac
ttcttgatccaaaatcacacggtcttgaacgcgagcgtccctctgcagtgcctccagctg
cagaacattgtcaacagcgccgttacccgagctgtgttcaacgagcagcccgatcctttc
acgcctggattgaagatcaatcgtttggagcaggttcgccaacatccgctctatcagccg
gactacaccgaatttatggaagacgtcaatattctggctgaggtcgagcgcattgccggc
aatcgtggcgacgagagcgacttcgacaccgttcttgcccagatcgaccctgccgacggc
catattaacgctctggccgtgaacgcactggtcgtctacgtcgggatccagcagacaaac
gtggcctcggtcttctcctccgccagcagtggtgcgcggctgctcgaacgcttgctccgc
gtctgcagccccaaagctcgctaccacctcgtgtcggcaatgacgaaccagatccgctac
gtcaacgccatgacgcactatttctccacagcgatgcagcattggttcagtaccggctcg
caggaggtccaggaacagatcatgcgtgtgttgtgtgagcgtctgatggttccacgccca
catccgtggggtctcattgtcatgatgctggagttggtcaagaatgagacgaacaatatc
tggtctttgccgtggatcaagacggcgcctcaagtcgagtcgatgttgctcaaccttgcg
cactcacaggatcagaggcaggctcgcagccccatgggagcaatgatgtaa
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integrated database retrieval system
