Zootoca vivipara (common lizard): 118085224
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Entry
118085224 CDS
T07275
Symbol
PAXBP1
Name
(RefSeq) PAX3- and PAX7-binding protein 1 isoform X1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zvi03041
]
118085224 (PAXBP1)
Spliceosome [BR:
zvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118085224 (PAXBP1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
Motif
Other DBs
NCBI-GeneID:
118085224
NCBI-ProteinID:
XP_034971527
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All DBs
Position
LG5:complement(49120717..49148010)
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AA seq
961 aa
AA seq
DB search
MFRKARRVNVRKRNESEEDEEEREESPPQQQQPPPRPGGDGPSGEADLLPGPKPPLLPLP
TGCVPLACPGGGSGGGFGFGGPEAVGRGGGLTAPQLQPPLVLIPPPPPPSQQTPPGNNGL
VPAASKLKERKNKSKEELLPPPPRGSLSLLSFQDEEEEAEEVFKVKKSSYSKKIVKLLKK
EYKEDLEKSKTKPETNSLADAEQSADKTGQVKDAIQEDGAANSEQGEEEMEVESEKEEEK
PKAGGAFSNTLSSLNVLRPGEIPDAAFIHAARKKRQMARELGDFLPLDSDPGKGRLVRED
ENDASDDEDDDEKRRIVFSVKEKSQRQKIAEEIGIEGSDDEALIAGEQDEELSRWEQEQI
RKGINIPQVQASQPAEVNNLYYQNTYHTMPYGSSYGIPYTYAAYGSSETKSHKTDNTIPF
KTPSNEMTPVTIDLVKKQLKDRLDSMREFHKANQQQHEKHLQRRDESTKAIERLEGSSGG
VGERYKFLQEMRGYVQDLLECFNEKVLLINELESAMHQLYKQRASRLVQRRQDDIKDESS
EFSSHSSKALMAPNLDSFGRDRTLYQEHVKRRTAEREARRARRRLAREQSGKMADHLEGL
SSDDEETSTDTTNFNMERDRILKESSKVFEDVVENFSSIDAIKSQFEAWRFKYSSSYNDA
YICLCLPKLLNPLIRLQLLTWNPLEDKCQDFESMLWFESLLFYGCEEYDQEKDDADVSLL
PTIVEKVVLPKLTVLAENVWDPFSTTQTSRMVAITQKLVNGYPSVVHAENKNTQTLLKGL
LLRMRRTLDDDVFMPLYPKSVLENKNSGPYLFFQRQFWSSVKLLGNFLQWHGILSNKTLQ
ELSIDGLLNRYILMAFQNSEYGDDSIKKAQSVISCFPKQWFTNLKGSKTISHLENLCRYL
VHLADTVYRNSIGSSDVEKRNARENIKQIIKLLSSIRALDHAATVANDHNVKELKNLSEG
K
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaaggcgcggcgcgtgaacgtgcggaagcggaacgagtctgaggaggacgaa
gaagagcgggaagagtcgccgcctcagcagcaacagccgccgccgcggccgggaggcgat
gggccttctggagaggccgacctgctgccgggtccgaagccgccgcttctgccgctcccg
acgggctgcgtccccctagcttgtcccgggggtggcagcggcggcggcttcggtttcggt
ggccctgaagcggtcggccgcggcggcggcttgacggccccgcagctccagccgccgctt
gttcttatccctcccccgccgcccccttcgcaacaaacgcccccagggaacaacgggctc
gtgccggcggcttctaagctgaaggagcgcaagaacaagagcaaggaggagctgctgccg
ccgccgccacgcggtagcctcagcctcctcagcttccaagatgaagaagaagaagcagaa
gaagtttttaaagtgaagaaatcaagttacagcaaaaagatagtaaagcttcttaagaaa
gaatacaaagaagaccttgaaaaatcgaagacaaaaccagaaaccaattctttagcagat
gccgaacagtctgctgacaaaacgggacaggttaaagatgcaattcaagaagatggggct
gcaaacagtgaacaaggagaagaagagatggaagttgaaagcgagaaagaagaagaaaag
ccaaaagctggaggagcattttcaaatactttgtcttctctgaatgttctgcgtccagga
gaaattccagatgctgcttttattcatgctgctaggaaaaagcgccaaatggctcgtgag
cttggggactttttgccacttgacagtgatccagggaaagggcgccttgttagagaagat
gaaaatgatgccagtgacgatgaagatgatgatgagaagcgaagaatagtcttttctgtg
aaagagaagtcccaaaggcaaaaaattgcagaggaaataggtatcgaaggaagtgatgat
gaagccctgattgctggggaacaggatgaagaactcagtcgatgggagcaagaacagata
cgtaaaggcattaatatacctcaggttcaagcaagtcaacctgctgaagtgaataacctg
tactaccagaatacttaccatacaatgccttatggttcatcttatggcattccttacaca
tatgctgcttatggatcatcggagacaaaatctcacaaaacagataatacaatacctttc
aaaactcccagtaatgagatgactcctgttactattgatttggtaaagaaacagcttaaa
gacaggttggactcaatgagagaatttcacaaagcaaatcagcagcaacatgagaagcat
ctgcaaagacgtgatgaatctaccaaggcaatcgaaagattggaagggtcttctgggggt
gttggtgaacggtataaatttctgcaagaaatgcgagggtatgtccaagacttgcttgag
tgtttcaatgaaaaggtgctcctgattaacgaactcgaatcagcaatgcatcagctgtac
aaacagcgagcttcccgccttgtccaaagacgacaagatgatattaaagatgaatcttcg
gagttttcaagccattcaagtaaagcactgatggcaccaaaccttgattcttttggacga
gacagaacactgtaccaagaacatgttaaaaggcggactgcagaaagagaagcaagaaga
gctcgtcgtagactggccagagagcaatctgggaagatggctgatcaccttgaaggcctt
tctagtgatgacgaagaaacttcaacagatactacaaacttcaatatggaacgagatcgc
attttgaaggagtccagcaaagtttttgaagatgtggtagaaaacttttcatccattgac
gccattaagtcgcaatttgaagcatggcgtttcaagtattcatcttcttacaatgatgct
tatatttgcctttgtttacctaagctattaaatcctttaataagacttcagttacttacc
tggaaccctttggaggataaatgccaagactttgagagtatgctatggtttgaatctttg
ctattttatggatgtgaagaatatgaccaagagaaagatgatgctgatgtttcactattg
cctactattgtggagaaagtggttctgcctaaattaacagtacttgctgaaaacgtatgg
gaccctttttctacaacacagacatctaggatggtagccattacccagaaactagtaaat
ggttatccatcagtggtacatgcagaaaacaaaaacacacagacattactaaaaggcctc
ttgcttagaatgaggagaacactagatgatgatgtattcatgccactttatcccaaaagt
gtcttagaaaacaagaactctggtccttatttgtttttccagcggcagttttggtcttca
gtgaagttattaggaaactttctgcagtggcatggaatcctttccaacaaaaccttacaa
gagttatcaatagatggattgctaaatagatacattcttatggctttccagaattctgag
tatggagatgatagcattaagaaagctcaaagtgtaatcagttgtttccctaaacagtgg
ttcactaatcttaaaggaagtaagacaatatcacatctagaaaacctctgtagatatctt
gttcatcttgctgatacagtatacagaaatagcattggaagctctgatgtagaaaaaaga
aatgcaagggagaatataaaacagataataaaacttctgtcaagtattcgagcactggac
catgctgcaacagttgcaaatgatcataatgtgaaagagttaaaaaatttaagtgaaggg
aaataa
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