Zootoca vivipara (common lizard): 118088425
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Entry
118088425 CDS
T07275
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04510
Focal adhesion
zvi04512
ECM-receptor interaction
zvi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118088425 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118088425 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118088425 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
zvi00535
]
118088425 (COL9A3)
Proteoglycans [BR:
zvi00535
]
Extracellular matrix (ECM) proteoglycans
Others
118088425 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
118088425
NCBI-ProteinID:
XP_034977968
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Position
LG7:complement(8087770..8147210)
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AA seq
684 aa
AA seq
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MAMAGFSALGLLLLSQLLASSSAQRPGPRGPPGPRGPPGTSGKDGIDGEPGPPGLPGPPG
PKGAPGKPGKAGNAGLPGLPGVDGLTGSDGPPGPVGPPGDRGAIGPAGPAGPAVSESTII
YLLHISMKDRQAPVGSQWNGYPGPPGPAGLPGFAGPPGPPGPPGIPGVIPDGNGDLQCPT
VCPPGPPGPPGIPGFKGHTGYKGEPGEVGKDGEKGSPGPPGPAGPPGTVGLQGPRGLRGL
IGPVGPVGDRGTIGFRGPPGVPGPPGKAGSRGDRGPQGFRGPKGDAGRPGPKGTPGTAGP
LGEPGMPGKDGRDGTHGLDGEKGDAARFGVPGEKGPNGLPGLPGKPGTKGEKGQLGVPGE
MGGTGPSGEPGIPGDRGIPGERGDPGPRGSSGPIGLQGPTGAPGVRGFQGRKGSSGEPGL
PGPTGIRGGSGERGPGGVSGPKGNQGIAGADGLPGDKGELGPFGPPGQKGEAGNRGELGP
KGVQGPNGTAGVPGIPGHPGKMGLQGEQGIPGITGKPGPPGKEASEQHIRELCGGMIHEQ
IAQLAANLRKPLAPGMTGRPGPAGPPGPPGATGIIGHPGAHGPPGYRGPPGDLGDPGPRG
DHGERGDKGATGKGVDGPDGDQGPQGPPGVPGTSKDGRDGSPGEPGLPGDPGRPGAIGVQ
GTPGVCDTSACMGAALIGGKSKKS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctatggctgggttctcagccctcggattacttcttctttctcagcttctggcctcc
tcctcagctcagaggccaggaccacgggggcctcctggaccacgaggacctccgggaaca
tctggcaaagatggcatagatggagagcctggtcctcccggtttgcctggtccaccaggg
ccgaaaggagcaccagggaagcctgggaaagcagggaatgccggcttgcctggtcttcca
ggagtagatggtttaacgggatctgatggcccacctggaccagtagggccaccaggggac
agaggcgccataggacctgcgggaccagctggaccagccgtgagtgaatctacaattata
tatctcttgcatataagtatgaaggaccgccaggccccagtgggctcccagtggaacggg
tatccaggaccgcccgggccagctggacttcctggttttgctggaccaccgggacctcca
ggaccaccaggtattcctggagtaatccccgacggcaatggagaccttcagtgtccaact
gtctgtccacctggccccccaggaccaccagggataccaggattcaaggggcatacgggt
tataaaggcgagcctggagaagtcggcaaagatggcgagaagggttcgccagggcccccc
ggtcctgcaggacctccaggaactgttggcttgcagggaccacgaggattaagaggcctg
attggccctgtaggtcctgttggagacaggggaacaataggtttcagaggaccccctggt
gttccgggtcccccaggaaaagcgggttctcgtggagatcgcgggcctcaggggttccgg
ggacccaaaggtgatgctggcagaccaggaccaaaaggaactccgggaactgctgggccc
ttaggagaacctggcatgcctggaaaagatgggagagatgggactcatggactcgatggt
gagaagggtgacgccgctcgctttggtgttcctggagaaaaggggccaaatggacttcct
ggactacctggaaaacctggaactaaaggagaaaagggtcaactgggtgttccaggagag
atgggaggaaccggtccttcaggagagccaggtatacctggcgatcgtggaatccccggg
gagagaggcgaccctggtccaaggggatcttctggaccaattggtttgcaaggccccacg
ggagcaccaggtgtaagagggtttcagggtcgtaaggggtcaagtggggagcctggcctt
cctggtcccactggaatccgtggcgggtctggtgagaggggccctggtggagtttccgga
ccgaaaggtaaccagggcatcgctggagcagatgggcttccgggagacaaaggagagttg
ggtcctttcggccctcccgggcaaaagggggaggcaggaaacaggggcgagctgggcccc
aaaggagttcaaggtcccaacggaacagcaggagttccaggaattccaggacacccgggc
aagatgggtttgcaaggcgaacaagggatccctgggatcaccgggaagccgggtcctcca
ggcaaggaagccagtgagcaacacataagagaactctgtggtggaatgatccatgagcaa
atcgcacagttagctgctaacttgaggaagcccctcgctcctgggatgacagggcggccc
gggcctgccggtcccccaggccctccaggggcaacgggaattatcgggcaccctggagct
catggcccacctggatacagaggaccaccaggagacctaggagatcctggtcctagaggt
gaccatggtgagaggggagacaaaggtgccacggggaaaggtgttgacggaccagatggg
gatcaaggacctcaaggtccgccgggtgtcccagggactagtaaagatggccgggatggc
tctcctggtgaacctgggttgccaggggatcctggaagaccaggtgcaattggagtccaa
ggaactccaggagtctgtgatacatctgcctgcatgggagcagctctcattggaggaaaa
tccaaaaagtcataa
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