Zootoca vivipara (common lizard): 118089412 Help Entry 118089412         CDS       T07275                                  Symbol PRPF19 Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism zvi  Zootoca vivipara (common lizard) Pathway zvi03040   Spliceosome zvi04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:zvi00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     118089412 (PRPF19)   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     118089412 (PRPF19)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:zvi03041]     118089412 (PRPF19)    04121 Ubiquitin system [BR:zvi04121]     118089412 (PRPF19)    03400 DNA repair and recombination proteins [BR:zvi03400]     118089412 (PRPF19) Enzymes [BR:zvi01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      118089412 (PRPF19) Spliceosome [BR:zvi03041]  Complex B   Other components    Prp19 complex     118089412 (PRPF19)  Complex C    Prp19-CDC5 complex     118089412 (PRPF19) Ubiquitin system [BR:zvi04121]  Ubiquitin ligases (E3)   U-box type E3    118089412 (PRPF19) DNA repair and recombination proteins [BR:zvi03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     118089412 (PRPF19) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_WDHD1_1st Beta-prop_EML_2 Prp19 Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR41 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_HPS5 U-box Beta-prop_IFT122_1st Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_SPT8 PROPPIN eIF2A Beta-prop_ACSF4 Beta-prop_Nup120_160 Cytochrom_D1 Ge1_WD40 zf-Nse Beta-prop_DCAF12 Beta-prop_VPS8 RMC1_N Beta-prop_WDR35_TULP_N Beta-prop_LRRK2 DUF1830 Tricorn_2nd ATG16 Cep57_MT_bd Motif Other DBs NCBI-GeneID:  118089412 NCBI-ProteinID:  XP_034979948 LinkDB All DBs Position LG1:77908803..77923016 Genome browser AA seq 504 aa AA seqDB search MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPVNNQPLSEEQLIDIKVAHP IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL TKEVTAAREALATLKPQAGLIVPQAVPSSQPNAVGAGEPMDLGELAGMTPEIIQKLQDKA TVLTTERKKRGKTVPEELVKPEELSRYRQVASHVGLHSASIPGILALDLCPSDTNKILTG GADKNVVVFDKTSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPSVSCVQ VVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCALTCAQFHP DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD LRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQVYICKQWTEVLHFTEHSGLTTG VAFGHHAKFLASTGMDRSLKFYSV NT seq 1515 nt NT seq  +upstreamnt  +downstreamnt atgtccctcatctgctccatttcaaatgaggtgcctgagcatccctgtgtgtctcctgtc tcaaaccatgtctatgagcgaagactgattgaaaagtatattgcagagaatgggactgat ccggtgaacaaccagccactgtctgaagagcaacttatagatatcaaagttgcccaccca attcggccaaagccaccatctgctactagcattccagccattctaaaggcacttcaagat gaatgggatgctgtcatgctgcacagtttcacgctacgccagcagctgcagactacacgt caggaattgtcccatgcgctataccagcatgatgctgcctgccgtgtcattgcccgtctc accaaagaggtcactgctgcgagagaagctttggcaactctgaaaccccaggctggcctc atcgttccccaggctgtaccttcttcacaacccaacgctgtgggtgctggtgaaccaatg gacttaggagagctggctggaatgaccccagagattatccagaagcttcaagacaaagcc acggtgctgaccacggagcgtaaaaagagagggaagaccgtgccagaggagctggtgaag ccggaagaactcagcaggtaccggcaggtggcttcacatgtgggactacacagtgccagt attcctggcatccttgctctcgacttgtgtccttctgacaccaacaagatcctcacaggt ggagctgataagaatgttgttgtctttgacaagacctcagagcagatcctggcgacactg aaaggtcacaccaagaaggtcaccagtgtagtcttccatccttcccaggaactggtgttc tcggcttcgccagatgctactatccggatctggtcagtccccagtgtttcatgtgtgcag gttgtgcgtgcccatgagagtgccgtgacagggctgagtctccatgccacaggcgattac ctactgagctcctctgatgaccagtattgggctttctctgacatccagaccggtcgtgtt ctcaccaaggtcacagatgaaacttctggctgtgctctgacctgtgcccagtttcatcct gatgggcttatttttgggacaggaacaatggactctcagattaagatctgggacttgaag gaacggaccaacgttgcaaacttcccaggacactctggccctattactagcattgccttc tctgagaatgggtactacctggccacggctgctgacgactcctctgtcaaactctgggat ctgcgcaaactgaagaactttaagaccctgcaactggacaacaactttgaggtgaagtcc ctcatatttgaccagagtggcacctatttggccctaggtggcactgatgtccaagtctac atctgtaagcaatggacggaggttctccacttcacagagcatagcggcctgaccaccgga gtggcctttgggcatcatgctaagttccttgcttcgacaggcatggacagaagcctgaaa ttctacagtgtgtag

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