Zootoca vivipara (common lizard): 118094377
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Entry
118094377 CDS
T07275
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118094377 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zvi03036
]
118094377 (CHD8)
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118094377 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
118094377
NCBI-ProteinID:
XP_034990599
LinkDB
All DBs
Position
LG13:complement(38619665..38682320)
Genome browser
AA seq
2481 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDESFNQGAPDPIEEALGLPGGALDSLAGGAKEQPAPAQP
EPPQPQALPLSDTQPEAVPELPQQDQPGLLQAPQDQEVLSQGNPFMGVSSATTTTVAVPS
SSAGGQQGAAVTAAPPPAPKIVILKAPAGSSVTGAHVAQIQAQPIGAANGGKVTFAKVLT
GTPLRPGVSIVSGNAVLATKMSPGAGAPATLHRLVQPGRPVKQLVLQPIKSQPGGSTGAT
PLKPAVTLTSTPAQGESKRITLVLQQPPAGGGAPGQRHVVLGSLPGKIVLQGNQLAALSQ
AKGAPGQPAKVVTIQLQVQQPGQQQLGGQPGTQKIQLLQQPPPTSGQQGTLGVSSVQQAQ
VVSGSGQRVTVPLKVVLQPQASSSQGSSSGLSVVKVLSSSEVAALPSSSGTARSSSDESR
KLEHQKKQEKANRIVAEAIARARARGEQNIPRVLNEDELPSVRPEETGERKRRRKGGGDR
VPKEERPRKGRGQGGSGKSKGRGKPSTITPVVGKKRKRNASSDNSDAEVMPAQSPREEEE
SSVQKRRSNRQVKRKKYTEDLDIKITDDEDDEELDVTGPVKTEQPPAPEPPAPEPIPEGE
TLPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPTGQFTEAEEFFVKYKNYSYLHCEWAT
IAQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEVDRILDESHSIDKDNGEPV
IYYLVKWCSLPYEDSTWELKEDVDEGKVREFKRIQSRHPELKRVARPQAGSWKKLELSHE
YKNGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIRGPFLV
IAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALI
TTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTV
EELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPK
QETIIEVELTNIQKKYYRAILEKNFNFLSKGAGHSNMPNLLNTMMELRKCCNHPYLINGA
EEKILTEFRDSCHHHLPHDFPLQAMVRSSGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLD
ILEDYLIQKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADT
CIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQ
SMSGREGSIAGIQQFSKKEIEDLLRKGAYAAIMEEDDEGSKFCEEDIDQILLRRTTTITI
ESEGKGSTFAKASFVASENRTDIALDDPNFWQKWAKKADLDLDMLNSKNNLVIDTPRVRK
QTRHFSTLKDDDLVEFSDLESDDDDRPRSRRHDRHHHHPLHHSYGRTDCFQVEKQLLVYG
WGRWREILSHGRFKRRMSERDVETICRAILVYCLMHYRGDENIKGFIWDLISPVENGKAK
ELQNHSESHAPALSSLPVPRAGLSIPVPRGRKGKKVKSQTTFDVQKAEWIRKYNPDTLFQ
DEGYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLAGTISSEIDMWFPLVDQAEVPT
AWWDTEADKSLLLGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEHRLDVGEGVDF
DKDCEDPEYKPVGGPAKEPDDEGDPLMMMDEEVSVVDGEEGQPGNLFWPPASAITARLRR
LITAFQRSYKREQLKMEAAERGDRRRRRCEAAFKLKEMVRREKQQRWTRREQSDFYRVVS
TFGVEYDPDTMRFHWGRFRAMARLEKKTDESLAKYFHGFVAMCRQVCRLPPAASDESPDP
TLFIEPITEERASRTLYRIDLLRRLREQVLCHPLLEERLALCQPPGPEMPPWWQCGRHDG
ELLRGVARHGLSQTDATIMQDPDFSFLAARLNHMHSRAGSTGTLPPPPPPPQALGLPLPG
AAVVTAAAPPAPLLLPPPLHELPTPRQQPTALPIKVESVDDSDSELDLSKISASSSCSST
SGCSDDSDGEEASCGGKLFEEEESSLLSLPTSHEGNSPQPSASDLLLQERQRAHEWPKDR
VLINRIDLVCQAVLSGKWPTAQQGQVGSCLMQGEGLPRLHGEYTSSPIPHICPLASQEEG
AASFTRLRHSGQEKEFTVQIKDEEGIKLTFQKHKLVPNGTMRDRPALTQKKSSKKMVELE
LQCLEALRGPDIDLEARIPVVNKTDGKLLVGDAAPRRADLEVWLQAHPEYAVDPRFLAYM
EERRKHRWPRFPKPVPIEPACLMGLERMQAASISANGKKSFLPDPTMNRLLPGPVGAESA
QKRGRQTPMEFSNMMALMGAGRVQLGAAGPLSLHHAHFQASTAHGSPLQYMPFSTAASAS
AASSSAAAALLHPGLGHPGYATGALHLGHPQPVDDDDEEDEMDDLSQGYASSERDFSLLD
DDPMMPANSDSSEDGDEEGDD
NT seq
7446 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccccataatggacctcttcgatgaccccaacctgttcggcctggactcattg
actgatgagagcttcaaccagggggccccagaccccattgaggaggccctggggctgccg
ggcggtgccttggactccctagcagggggcgccaaagagcagccggcccctgcacagccg
gagcctccccagccgcaggcccttcccctctcggacacacagcccgaggctgtgcctgaa
ctgccgcagcaggatcagccggggctcctgcaggccccccaggaccaggaagtcctcagc
cagggcaaccccttcatgggcgtctcctctgccaccaccacgacagttgcagtgccgtct
tcatctgccggagggcagcaaggcgccgctgtcacggcggccccacctccggccccgaag
attgtcattttgaaggcgccagcaggcagctcagtgacaggggcccacgtggcccagatc
caagcccagcccatcggggctgccaacgggggcaaagtgaccttcgccaaggtgctgaca
ggcaccccactgcggccaggggtctccatcgtctcgggcaacgcggtgctggccaccaaa
atgtcccctggagcgggggccccagccacactccaccgcctggtgcagcctggccggcct
gtcaagcagctggtgctccagcccatcaagagccagccggggggcagcactggagccacg
cccctcaagcctgccgtcactctgacctctactccagcacagggagagtcgaaacgcatc
accttggtcctccagcagcccccggcgggtggaggagccccagggcagcgccacgtggtt
ctgggcagcctgccgggcaagattgtactccagggcaaccagttggcggccctgagccag
gccaagggcgcaccagggcagccagccaaggtggtcaccatccagctccaagttcagcag
cccggacagcagcaactcggcggccagcctgggacccagaagatccagcttctgcagcag
cccccacccacctctggccagcaagggacgttgggtgtgtcctccgtacagcaagcccag
gtggtgagcggttcggggcagagagtaacagtccccctcaaagtcgtcttgcaaccgcag
gccagctcatcacaaggcagctcctctgggctctcagtcgtgaaggtgctgagcagtagc
gaggtggccgccctcccctcctccagcggtacggcgcggagcagctcggacgaatcccgc
aagctggagcaccagaagaagcaggagaaggccaaccgcattgtggcagaagccatcgcc
cgggcccgggcccggggcgagcagaacatcccccgcgtgctgaacgaggacgagctcccc
agcgtgcgccccgaggagacaggagagcgcaagcgtcgccggaaaggcggaggcgaccgc
gttcccaaggaagagcggccgcgcaagggcaggggccaggggggatcggggaagagcaaa
ggaagagggaagcccagcaccatcacgccagtcgtagggaagaagcggaaacggaacgct
tcctcagacaactcggacgctgaggtcatgccggcgcagtccccccgcgaggaggaggag
agcagcgtgcagaagcggcgctctaaccgtcaggtgaagcggaagaaatacactgaggac
ctggacatcaagatcacagatgatgaggatgatgaggagctggatgtgacggggcctgtc
aagaccgagcagccgccagcccccgaaccacctgctccggagccgattcccgagggggag
acgctgccttccatgcagttttttgtggaaaaccccagtgaggaagacgctgctatagtg
gacaaagttctatccatgcgggtagtgaagaaggagcttcccaccggacagtttacagaa
gcggaagaattcttcgtgaaatacaagaactactcctacttgcactgcgaatgggccacc
atagctcagctggagaaggacaagcgaatccaccagaagctcaagcgctttaagaccaaa
atggctcagatgaggcacttctttcacgaggacgaggagcccttcaatccagactatgtg
gaggttgaccgcatcctggatgagtcgcacagcattgacaaggacaatggggagccggtg
atctattacctggtgaagtggtgttcgctcccctacgaggacagtacgtgggaactcaaa
gaggatgtggatgaggggaaggtccgggagttcaaacgcatccagtctaggcacccggag
ctgaagcgcgtggcccgtccccaggctggttcctggaagaaattagagctgtctcatgaa
tacaagaacggcaaccaactgcgagagtatcagctggagggtgtgaattggttgctgttc
aactggtacaacaggcaaaactgcatcctggctgacgaaatgggcctgggcaaaaccatc
cagtcgattgccttcctgcaggaggtttacaacgtgggcatccgggggcccttcctggtt
atcgcccctctctccaccatcaccaactgggagcgggagtttaacacctggaccgagatg
aacaccatcgtctaccacggcagcctcgcctcccgccagatgatccagcaatatgagatg
tactgcaaagattcccggggccgcctgatcccaggcgcatacaagtttgatgccctgatc
accacctttgagatgatcctgtcggactgccccgagctgagggagatagagtggcgttgt
gtcatcattgacgaagcccatcgccttaagaaccgcaactgcaaactgctggacagtctt
aagcacatggacctggagcacaaagtgttactgaccggcacccccctccagaatacagtg
gaggaactcttcagcctcctgcatttcctcgagccctcccagttcccctcagaatcagag
ttcctcaaggactttggtgacctcaaaactgaggagcaggtgcagaaactgcaggccatc
ctgaagcccatgatgcttcggcggctgaaggaggacgtggagaagaacttggcccccaag
caggaaaccatcatcgaggtggagctcaccaacatccagaagaagtactaccgggccatc
ctggagaagaatttcaacttcctgtccaaaggggcagggcacagcaacatgcccaacctc
ctcaacaccatgatggagctacgcaagtgttgcaaccatccctacctcatcaacggtgcc
gaggagaagatcctgaccgagtttcgagattcctgccaccaccacctgccccatgatttc
cccttgcaggccatggtgcgctcctctgggaagttggtgctgattgataagcttcttccc
aagttgaaggctggcgggcacaaggtgctgatcttctcccagatggttcgttgcctcgac
atcctggaggactacctcatccagaagaggtatctctacgagcgcattgatgggcgagtg
cgggggaacttgcggcaggcggccatcgatcgcttcagcaagccggactcggaccgcttc
gtcttcctgctctgcacgcgggcgggtgggctaggcatcaacctgactgccgccgatacc
tgcatcatctttgattcggattggaacccccagaacgacctgcaggcccaggcacgctgc
caccgtatcgggcagagcaaagcggtgaaggtctaccgtctcatcacccgcaactcctac
gagcgagagatgtttgacaaagccagcctcaagctggggctggacaaggccgtcctgcag
tccatgagcgggcgagagggcagcattgccgggatccagcagttttcaaagaaggagatt
gaagacctgctgcggaagggagcctacgctgccatcatggaagaggacgacgagggctcc
aagttctgtgaagaggacattgaccagattctgctgcggcggacaaccactatcaccatt
gagagcgaagggaagggctccactttcgccaaggcgagctttgtggcctcagagaacagg
acggacatcgccttggacgaccccaacttctggcagaagtgggccaagaaggcagacttg
gacctggatatgctcaacagcaagaacaacctggtgattgacaccccccgtgttcgcaag
cagacgcgacacttcagcaccctgaaggacgacgacctggtggagttctccgatctggag
agtgacgacgatgaccggccgcgctcgcggcgccacgaccgccaccaccaccacccgctc
caccattcctacgggcgcacggattgcttccaggtggagaaacaactgctagtctatggc
tggggacgctggcgggagatcctgtcgcacggacggttcaagcggcgcatgtctgaacgg
gacgtggagaccatctgcagggccatcctcgtctactgcttgatgcactaccggggcgac
gagaatatcaaggggttcatctgggatctcatcagcccggttgagaacggcaaagccaag
gaacttcagaaccactccgagagccatgcccctgctctgagctcacttcctgttcctcgg
gcaggcctgtccatcccagtcccacgaggccgcaaagggaagaaggtcaagtcccagacc
actttcgacgtccagaaagccgagtggatccgcaagtacaaccccgacaccctcttccag
gatgagggctacaagaagcacctcaagcaccaatgcaacaaggttctcctacgtgtccgt
atgctgtattacctgcgccaggaggtgatcggggaccaagccgagaaagttttggcaggc
actatttccagtgaaatcgacatgtggttcccactggtggaccaagcagaggtccccaca
gcctggtgggatacagaagctgacaagtctttgctccttggggttttcaaacatggctac
gagaagtacaacaccatgcgagcggatcctgcgctctgcttcctggagaaggctggtcgc
cctgacgacaaggccatcgccgccgagcatcgcctggatgtgggagagggggtcgatttc
gataaggactgcgaggacccggagtacaaaccagtgggaggccccgccaaggagccggat
gatgagggtgacccactgatgatgatggatgaggaagtatctgtggtggacggtgaagaa
ggtcagccggggaacctgttctggcccccagcctcggccatcacggctcgcttgcggaga
ctgatcaccgccttccagcggagctacaaacgcgagcagctcaagatggaggcggcagaa
cgaggggaccggcggcgccggcgctgtgaggccgcattcaagctgaaggagatggtgcgg
cgagagaagcaacagaggtggacacgccgagagcaatccgacttttaccgcgttgtctcc
acgttcggggtggagtacgacccagacaccatgcgcttccactggggccgcttccgggcc
atggcccggctggagaagaagacggacgagagcctcgccaagtatttccacggcttcgtg
gccatgtgccggcaagtgtgccggctgcctcccgcagcaagcgatgagtctccagacccg
acgctgttcattgagcccatcacggaggagagggcttcgcgtactctgtaccgcattgac
ctcctgcggcgcttgcgggaacaggtcctgtgccacccgctcttggaagagcgcctcgcc
ctctgccagcccccgggccccgagatgcctccctggtggcaatgcgggcgccacgacgga
gagttgctgcgtggcgtggcccgccacggcctcagccagaccgacgccaccatcatgcag
gacccggacttctccttcttggccgctcgactcaaccacatgcacagtcgggcggggagc
acagggacgctgccgccgccgcctcccccgccgcaggctttggggctgcctcttcccggg
gctgccgtggtgacagcggccgctcctcctgcccccctgctcttgccgccgcccttgcat
gagctccccactccgcgacaacagcccacagccctccccattaaagttgaatcggtggac
gactctgactcggagctggacctcagcaagatctccgcttcttcgtcttgctcttctact
tcggggtgctcggatgatagcgacggcgaagaggcctcttgcggcgggaaactgtttgag
gaggaagagtcgtcgcttctctctctgcccacctcccacgagggcaactctccgcagccc
agcgcctctgacctgctgttacaggagcgccagcgggcccacgagtggccaaaggaccga
gtgctcatcaaccgcatcgacttggtatgtcaagccgtgctctctgggaaatggccgaca
gcacagcagggccaggtgggatcctgcctcatgcagggagaaggcctcccacgcctacac
ggggagtacaccagctctcccatcccccacatctgccccctggcgtcgcaggaagaaggg
gccgcctccttcacccgcctccggcacagcgggcaagagaaggagtttactgtgcagatc
aaagatgaagagggaatcaagctgaccttccagaagcacaagctggtccccaacggcact
atgcgcgaccgtcccgctctcactcagaagaagagcagcaagaagatggtggagctggag
ctgcagtgtctggaggcactgagaggccccgatatcgacctcgaggcccgtatccctgtg
gtgaacaagacggacgggaagctgttagtgggtgacgcagccccccggcgagctgacctt
gaggtgtggctgcaggcccacccagagtacgctgtcgaccctcgctttttggcgtacatg
gaggaacggcggaagcacaggtggcctcgctttcccaagcctgttccgatagagccggcc
tgcctgatgggtctggagcggatgcaggcagccagcatctctgctaacggcaagaagagc
ttcctgcccgatcccaccatgaaccgcctccttcccggaccagttggggccgagagtgcc
cagaagcggggccgccagacccccatggagttttccaacatgatggctctgatgggtgcc
ggacgggtccagctgggcgccgcggggcccctctccttgcaccatgcccacttccaggcc
agcacggcacacggctctcccttacagtacatgcccttttcgactgccgcctcagcctct
gccgcctcttcctccgctgccgcagccctgcttcaccccggcttgggccaccccggctac
gccacaggtgccttgcacctgggccacccgcagcccgtggacgacgacgacgaggaagac
gagatggacgacttgtctcagggctacgccagctcggagcgggacttctccttgctcgac
gacgaccccatgatgccggccaactccgactccagcgaggacggcgatgaggagggcgac
gactga
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integrated database retrieval system
