{
	"name":"babb03000",
	"children":[
	{
		"name":"Eukaryotic type",
		"children":[
		{
			"name":"Basic leucine zipper (bZIP)",
			"children":[
			{
				"name":"AP-1(-like) components, Jun"
			},
			{
				"name":"AP-1(-like) components, Fos"
			},
			{
				"name":"AP-1(-like) components, Maf"
			},
			{
				"name":"AP-1(-like) components, NF-E2"
			},
			{
				"name":"AP-1(-like) components, Fungal regulators"
			},
			{
				"name":"AP-1(-like) components, CRE-BP\/ATF"
			},
			{
				"name":"CREB"
			},
			{
				"name":"C\/EBP-like factors"
			},
			{
				"name":"bZIP\/PAR"
			},
			{
				"name":"Plant bZIP factors"
			},
			{
				"name":"ZIP only"
			}
			]
		},
		{
			"name":"Basic helix-loop-helix (bHLH)",
			"children":[
			{
				"name":"Ubiquitous (class A) factors"
			},
			{
				"name":"Myogenic transcription factors"
			},
			{
				"name":"Achaete-Scute"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, Lymphoid factors"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, Mesodermal Twist-like factors"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, HEN"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, Mesp"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, Atonal"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, Pancreatic factors"
			},
			{
				"name":"Hairy, Hairy\/E(SPL)"
			},
			{
				"name":"Hairy, Fungal regulators"
			},
			{
				"name":"Factors with PAS domain"
			},
			{
				"name":"Yabby"
			},
			{
				"name":"INO"
			},
			{
				"name":"HLH domain only"
			}
			]
		},
		{
			"name":"Basic helix-loop-helix\/leucine zipper (bHLH-ZIP)",
			"children":[
			{
				"name":"Ubiquitous bHLH-ZIP factors"
			},
			{
				"name":"Cell cycle controlling factors, Myc"
			},
			{
				"name":"Cell cycle controlling factors, Mad\/Max"
			},
			{
				"name":"Other bHLH-ZIP factors"
			}
			]
		},
		{
			"name":"Other basic domains",
			"children":[
			{
				"name":"NF-1"
			},
			{
				"name":"RF-X"
			},
			{
				"name":"AP-2 (bHSH)"
			}
			]
		},
		{
			"name":"Zinc finger",
			"children":[
			{
				"name":"Cys4 thyroid hormone receptor-like"
			},
			{
				"name":"Cys4 hepatocyte nuclear factor 4-like"
			},
			{
				"name":"Cys4 estrogen receptor-like"
			},
			{
				"name":"Cys4 nerve growth factor IB-like"
			},
			{
				"name":"Cys4 Fushi tarazu-F1-like"
			},
			{
				"name":"Cys4 germ cell nuclear factor"
			},
			{
				"name":"Cys4 Knirps\/DAX1-like"
			},
			{
				"name":"Cys4 GATA-factors"
			},
			{
				"name":"Cys2His2 SP\/KLF family and related proteins"
			},
			{
				"name":"Cys2His2 GLI-like"
			},
			{
				"name":"Cys2His2 Snail"
			},
			{
				"name":"Cys2His2 BTB-ZF factors"
			},
			{
				"name":"Cys2His2 BED"
			},
			{
				"name":"Cys2His2 PRDM"
			},
			{
				"name":"Cys2His2 metabolic regulators in fungi"
			},
			{
				"name":"Cys2His2 others"
			},
			{
				"name":"Cys2HisCys zinc factors"
			},
			{
				"name":"Cys3His zinc factors"
			},
			{
				"name":"Cys2CysHis zinc factors"
			},
			{
				"name":"CXXC CpG-binding proteins"
			},
			{
				"name":"Cys6 metabolic regulators in fungi"
			},
			{
				"name":"Other zinc fingers"
			}
			]
		},
		{
			"name":"Helix-turn-helix",
			"children":[
			{
				"name":"Homeo domain ANTP: HOXL"
			},
			{
				"name":"Homeo domain ANTP: NKL"
			},
			{
				"name":"Homeo domain Paired-related"
			},
			{
				"name":"Homeo domain LIM"
			},
			{
				"name":"Homeo domain POU"
			},
			{
				"name":"Homeo domain SINE"
			},
			{
				"name":"Homeo domain ZF"
			},
			{
				"name":"Homeo domain CUT"
			},
			{
				"name":"Homeo domain PROS"
			},
			{
				"name":"Homeo domain TALE"
			},
			{
				"name":"Homeo domain other"
			},
			{
				"name":"Fork head\/winged helix developmental regulators"
			},
			{
				"name":"Fork head\/winged helix tissue-specific regulators"
			},
			{
				"name":"Fork head\/winged helix cell cycle-controlling factors, E2F"
			},
			{
				"name":"Fork head\/winged helix cell cycle-controlling factors, DP"
			},
			{
				"name":"Fork head\/winged helix other regulators"
			},
			{
				"name":"Stork head\/winged helix factors"
			},
			{
				"name":"Heat shock factors"
			},
			{
				"name":"Tryptophan clusters Myb, Myb-factors"
			},
			{
				"name":"Tryptophan clusters Myb, Myb-like factors"
			},
			{
				"name":"Tryptophan clusters Ets-type"
			},
			{
				"name":"Tryptophan clusters interferon-regulating factors"
			},
			{
				"name":"TEA domain"
			},
			{
				"name":"ARID"
			}
			]
		},
		{
			"name":"beta-Scaffold factors with minor groove contacts",
			"children":[
			{
				"name":"RHR (Rel homology region) Rel\/Ankyrin"
			},
			{
				"name":"RHR (Rel homology region) Ankyrin only"
			},
			{
				"name":"RHR (Rel homology region) NF-AT"
			},
			{
				"name":"STAT"
			},
			{
				"name":"p53"
			},
			{
				"name":"MADS-box regulators of differentiation, MEF-2"
			},
			{
				"name":"MADS-box regulators of differentiation, Homeotic genes"
			},
			{
				"name":"MADS-box regulators of differentiation, Yeast regulators"
			},
			{
				"name":"MADS-box responders to external signals"
			},
			{
				"name":"SAND domain-containing proteins"
			},
			{
				"name":"TATA-binding proteins"
			},
			{
				"name":"HMG SOX"
			},
			{
				"name":"HMG TCF-1"
			},
			{
				"name":"HMG TOX"
			},
			{
				"name":"HMG2-related"
			},
			{
				"name":"UBF"
			},
			{
				"name":"Other HMG box factors"
			},
			{
				"name":"Heteromeric CCAAT factors"
			},
			{
				"name":"Grainyhead"
			},
			{
				"name":"Cold-shock domain factors, DbpA-like"
			},
			{
				"name":"Cold-shock domain factors, YB-1\/DbpB-like"
			},
			{
				"name":"Cold-shock domain factors, FRG Y2-like"
			},
			{
				"name":"Runt"
			},
			{
				"name":"MYRF"
			}
			]
		},
		{
			"name":"Other transcription factors",
			"children":[
			{
				"name":"HMGI(Y)"
			},
			{
				"name":"NUPR"
			},
			{
				"name":"Pocket domain Rb"
			},
			{
				"name":"Pocket domain CBP"
			},
			{
				"name":"T-box"
			},
			{
				"name":"DMRT"
			},
			{
				"name":"LRRFIP"
			},
			{
				"name":"TCP"
			},
			{
				"name":"AP2\/ERF"
			},
			{
				"name":"WRKY"
			},
			{
				"name":"LOB"
			},
			{
				"name":"GRAS"
			},
			{
				"name":"NAC"
			},
			{
				"name":"Copper-fist proteins fungal regulators"
			},
			{
				"name":"Others"
			}
			]
		}
		]
	},
	{
		"name":"Prokaryotic type",
		"children":[
		{
			"name":"Helix-turn-helix",
			"children":[
			{
				"name":"AraC family",
				"children":[
				{
					"name":"DK48_2119 helix-turn-helix domain protein\tK18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA"
				},
				{
					"name":"DK48_1714 methylated-DNA-[]-cysteine S-methyltransferase family protein\tK10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response \/ methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]"
				},
				{
					"name":"DK48_2352 methylated-DNA-[]-cysteine S-methyltransferase family protein\tK10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response \/ methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]"
				}
				]
			},
			{
				"name":"LysR family",
				"children":[
				{
					"name":"DK48_2371 bacterial regulatory helix-turn-helix , lysR family protein\tK03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator"
				},
				{
					"name":"DK48_2121 pcaQ; pca operon transcription factor PcaQ\tK02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator"
				},
				{
					"name":"DK48_2182 bacterial regulatory helix-turn-helix , lysR family protein\tK04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator"
				},
				{
					"name":"DK48_2992 bacterial regulatory helix-turn-helix , lysR family protein\tK04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator"
				},
				{
					"name":"DK48_2263 lysR substrate binding domain protein\tK19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein"
				}
				]
			},
			{
				"name":"DeoR family",
				"children":[
				{
					"name":"DK48_1914 deoR-like helix-turn-helix domain protein\tK02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor"
				}
				]
			},
			{
				"name":"LacI family",
				"children":[
				{
					"name":"DK48_1541 periplasmic binding s and sugar binding domain of LacI family protein\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor"
				},
				{
					"name":"DK48_1907 periplasmic binding s and sugar binding domain of LacI family protein\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor"
				},
				{
					"name":"DK48_2949 periplasmic binding s and sugar binding domain of LacI family protein\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor"
				},
				{
					"name":"DK48_2913 bacterial regulatory s, lacI family protein\tK03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor"
				}
				]
			},
			{
				"name":"GntR family",
				"children":[
				{
					"name":"DK48_1011 phnF; phosphonate metabolism transcriptional regulator PhnF\tK02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein"
				},
				{
					"name":"DK48_2392 hutC; histidine utilization repressor\tK05836 hutC; GntR family transcriptional regulator, histidine utilization repressor"
				},
				{
					"name":"DK48_2378 UTRA domain protein\tK24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator"
				},
				{
					"name":"DK48_3107 UTRA domain protein\tK24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator"
				},
				{
					"name":"DK48_2711 UTRA domain protein\tK03710 K03710; GntR family transcriptional regulator"
				},
				{
					"name":"DK48_2522 pdhR; pyruvate dehydrogenase complex repressor\tK05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex"
				}
				]
			},
			{
				"name":"TetR\/AcrR family",
				"children":[
				{
					"name":"DK48_1537 betI; transcriptional repressor BetI\tK02167 betI; TetR\/AcrR family transcriptional regulator, transcriptional repressor of bet genes"
				},
				{
					"name":"DK48_1785 bepR; HTH-type transcriptional repressor BepR\tK03577 acrR; TetR\/AcrR family transcriptional regulator, acrAB operon repressor"
				},
				{
					"name":"DK48_1795 bacterial regulatory s, tetR family protein\tK09017 rutR; TetR\/AcrR family transcriptional regulator"
				},
				{
					"name":"DK48_3061 bacterial regulatory s, tetR family protein\tK23777 cecR; TetR\/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity"
				}
				]
			},
			{
				"name":"Lrp\/AsnC family",
				"children":[
				{
					"name":"DK48_2195 asnC family protein\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein"
				},
				{
					"name":"DK48_578 asnC family protein\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein"
				},
				{
					"name":"DK48_1239 asnC family protein\tK05800 decR; Lrp\/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator"
				},
				{
					"name":"DK48_476 asnC family protein\tK05800 decR; Lrp\/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator"
				},
				{
					"name":"DK48_2239 asnC family protein\tK26601 azlB; Lrp\/AsnC family transcriptional regulator, repressor for azl operon"
				}
				]
			},
			{
				"name":"LuxR family",
				"children":[
				{
					"name":"DK48_2576 vjbR; HTH-type quorum sensing-dependent transcriptional regulator vjbR\tK21697 vjbR; LuxR family transcriptional regulator, quorum-sensing system regulator VjbR"
				}
				]
			},
			{
				"name":"MarR family",
				"children":[
				{
					"name":"DK48_2227 marR family protein\tK06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin"
				},
				{
					"name":"DK48_3070 iclR helix-turn-helix domain protein\tK06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin"
				},
				{
					"name":"DK48_373 marR family protein\tK06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin"
				},
				{
					"name":"DK48_2349 ohrR; transcriptional regulator OhrR\tK23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator"
				}
				]
			},
			{
				"name":"MerR family",
				"children":[
				{
					"name":"DK48_1893 cueR; Cu(I)-responsive transcriptional regulator\tK19591 cueR; MerR family transcriptional regulator, copper efflux regulator"
				}
				]
			},
			{
				"name":"Fur family",
				"children":[
				{
					"name":"DK48_496 ferric uptake regulator family protein\tK03711 fur; Fur family transcriptional regulator, ferric uptake regulator"
				},
				{
					"name":"DK48_2767 ferric uptake regulator family protein\tK09823 zur; Fur family transcriptional regulator, zinc uptake regulator"
				},
				{
					"name":"DK48_14 ferric uptake regulator family protein\tK09826 irr; Fur family transcriptional regulator, iron response regulator"
				}
				]
			},
			{
				"name":"IclR family",
				"children":[
				{
					"name":"DK48_2118 beta-ketoadipate pathway transcriptional regulator, PcaR\/PcaU\/PobR family protein\tK02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein"
				},
				{
					"name":"DK48_509 bacterial transcriptional regulator family protein\tK20539 blcR; IclR family transcriptional regulator, blcABC operon repressor"
				}
				]
			},
			{
				"name":"CRP\/FNR family",
				"children":[
				{
					"name":"DK48_1442 aadR; transcriptional activatory protein AadR\tK01420 fnr; CRP\/FNR family transcriptional regulator, anaerobic regulatory protein"
				},
				{
					"name":"DK48_2948 cyclic nucleotide-binding domain protein\tK13642 ftrB; CRP\/FNR family transcriptional regulator, transcriptional activator FtrB"
				},
				{
					"name":"DK48_2912 cyclic nucleotide-binding domain protein\tK21564 nnrR; CRP\/FNR family transcriptional regulator, nitrogen oxide reductase regulator"
				},
				{
					"name":"DK48_2929 cyclic nucleotide-binding domain protein\tK21564 nnrR; CRP\/FNR family transcriptional regulator, nitrogen oxide reductase regulator"
				}
				]
			},
			{
				"name":"Rrf2 family",
				"children":[
				{
					"name":"DK48_3150 Rrf2 family protein\tK13772 rirA; Rrf2 family transcriptional regulator, iron-responsive regulator"
				}
				]
			},
			{
				"name":"ArsR family",
				"children":[
				{
					"name":"DK48_3056 bigR; biofilm growth-associated repressor\tK22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator"
				},
				{
					"name":"DK48_563 bacterial regulatory , arsR family protein\tK22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator"
				}
				]
			},
			{
				"name":"XRE family",
				"children":[
				{
					"name":"DK48_932 helix-turn-helix family protein\tK21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator"
				},
				{
					"name":"DK48_540 hypothetical protein\tK07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator"
				}
				]
			},
			{
				"name":"PadR family"
			},
			{
				"name":"Other families",
				"children":[
				{
					"name":"DK48_1286 biotin--[acetyl-CoA-carboxylase] ligase\tK03524 birA; BirA family transcriptional regulator, biotin operon repressor \/ biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]"
				}
				]
			}
			]
		},
		{
			"name":"Ribbon-helix-helix",
			"children":[
			{
				"name":"CopG family",
				"children":[
				{
					"name":"DK48_2271 nikR; nickel-responsive transcriptional regulator NikR\tK07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator"
				}
				]
			},
			{
				"name":"Other families",
				"children":[
				{
					"name":"DK48_2194 delta-1-pyrroline-5-carboxylate dehydrogenase\tK13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor \/ proline dehydrogenase \/ delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]"
				}
				]
			}
			]
		},
		{
			"name":"Other transcription factors",
			"children":[
			{
				"name":"BglG family"
			},
			{
				"name":"Others",
				"children":[
				{
					"name":"DK48_2922 4Fe-4S binding domain protein\tK19339 nosR; NosR\/NirI family transcriptional regulator, nitrous oxide reductase regulator"
				},
				{
					"name":"DK48_1978 frmR; transcriptional repressor frmR\tK23239 frmR; FrmR\/RcnR family transcriptional regulator, repressor of frmRAB operon"
				},
				{
					"name":"DK48_161 bolA-like family protein\tK05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator"
				},
				{
					"name":"DK48_129 ParB\/RepB\/Spo0J family partition domain protein\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein"
				},
				{
					"name":"DK48_2686 repB; plasmid partitioning protein RepB\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein"
				},
				{
					"name":"DK48_397 carD-like\/TRCF domain protein\tK07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription"
				},
				{
					"name":"DK48_1940 hrcA; heat-inducible transcription repressor HrcA\tK03705 hrcA; heat-inducible transcriptional repressor"
				},
				{
					"name":"DK48_1901 tenA; thiaminase II\tK03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]"
				},
				{
					"name":"DK48_3202 hypothetical protein\tK06140 rnk; regulator of nucleoside diphosphate kinase"
				},
				{
					"name":"DK48_1614 hypothetical protein\tK07735 algH; putative transcriptional regulator"
				},
				{
					"name":"DK48_1078 dksA; RNA polymerase-binding protein DksA\tK06204 dksA; RNA polymerase-binding transcription factor"
				},
				{
					"name":"DK48_1335 nrdR; transcriptional regulator NrdR\tK07738 nrdR; transcriptional repressor NrdR"
				},
				{
					"name":"DK48_1236 sel1 repeat family protein\tK25885 exoR; exopolysaccharide production negative regulator"
				}
				]
			}
			]
		}
		]
	}
	]
}