{
	"name":"cib03000",
	"children":[
	{
		"name":"Eukaryotic type",
		"children":[
		{
			"name":"Basic leucine zipper (bZIP)",
			"children":[
			{
				"name":"AP-1(-like) components, Jun"
			},
			{
				"name":"AP-1(-like) components, Fos"
			},
			{
				"name":"AP-1(-like) components, Maf"
			},
			{
				"name":"AP-1(-like) components, NF-E2"
			},
			{
				"name":"AP-1(-like) components, Fungal regulators"
			},
			{
				"name":"AP-1(-like) components, CRE-BP\/ATF"
			},
			{
				"name":"CREB"
			},
			{
				"name":"C\/EBP-like factors"
			},
			{
				"name":"bZIP\/PAR"
			},
			{
				"name":"Plant bZIP factors"
			},
			{
				"name":"ZIP only"
			}
			]
		},
		{
			"name":"Basic helix-loop-helix (bHLH)",
			"children":[
			{
				"name":"Ubiquitous (class A) factors"
			},
			{
				"name":"Myogenic transcription factors"
			},
			{
				"name":"Achaete-Scute"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, Lymphoid factors"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, Mesodermal Twist-like factors"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, HEN"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, Mesp"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, Atonal"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, Pancreatic factors"
			},
			{
				"name":"Hairy, Hairy\/E(SPL)"
			},
			{
				"name":"Hairy, Fungal regulators"
			},
			{
				"name":"Factors with PAS domain"
			},
			{
				"name":"Yabby"
			},
			{
				"name":"INO"
			},
			{
				"name":"HLH domain only"
			}
			]
		},
		{
			"name":"Basic helix-loop-helix\/leucine zipper (bHLH-ZIP)",
			"children":[
			{
				"name":"Ubiquitous bHLH-ZIP factors"
			},
			{
				"name":"Cell cycle controlling factors, Myc"
			},
			{
				"name":"Cell cycle controlling factors, Mad\/Max"
			},
			{
				"name":"Other bHLH-ZIP factors"
			}
			]
		},
		{
			"name":"Other basic domains",
			"children":[
			{
				"name":"NF-1"
			},
			{
				"name":"RF-X"
			},
			{
				"name":"AP-2 (bHSH)"
			}
			]
		},
		{
			"name":"Zinc finger",
			"children":[
			{
				"name":"Cys4 thyroid hormone receptor-like"
			},
			{
				"name":"Cys4 hepatocyte nuclear factor 4-like"
			},
			{
				"name":"Cys4 estrogen receptor-like"
			},
			{
				"name":"Cys4 nerve growth factor IB-like"
			},
			{
				"name":"Cys4 Fushi tarazu-F1-like"
			},
			{
				"name":"Cys4 germ cell nuclear factor"
			},
			{
				"name":"Cys4 Knirps\/DAX1-like"
			},
			{
				"name":"Cys4 GATA-factors"
			},
			{
				"name":"Cys2His2 SP\/KLF family and related proteins"
			},
			{
				"name":"Cys2His2 GLI-like"
			},
			{
				"name":"Cys2His2 Snail"
			},
			{
				"name":"Cys2His2 BTB-ZF factors"
			},
			{
				"name":"Cys2His2 BED"
			},
			{
				"name":"Cys2His2 PRDM"
			},
			{
				"name":"Cys2His2 metabolic regulators in fungi"
			},
			{
				"name":"Cys2His2 others"
			},
			{
				"name":"Cys2HisCys zinc factors"
			},
			{
				"name":"Cys3His zinc factors"
			},
			{
				"name":"Cys2CysHis zinc factors"
			},
			{
				"name":"CXXC CpG-binding proteins",
				"children":[
				{
					"name":"HF677_005725 DNA cytosine methyltransferase\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]"
				},
				{
					"name":"HF677_009545 DNA cytosine methyltransferase\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]"
				},
				{
					"name":"HF677_014070 DNA cytosine methyltransferase\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]"
				},
				{
					"name":"HF677_014100 DNA cytosine methyltransferase\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]"
				}
				]
			},
			{
				"name":"Cys6 metabolic regulators in fungi"
			},
			{
				"name":"Other zinc fingers"
			}
			]
		},
		{
			"name":"Helix-turn-helix",
			"children":[
			{
				"name":"Homeo domain ANTP: HOXL"
			},
			{
				"name":"Homeo domain ANTP: NKL"
			},
			{
				"name":"Homeo domain Paired-related"
			},
			{
				"name":"Homeo domain LIM"
			},
			{
				"name":"Homeo domain POU"
			},
			{
				"name":"Homeo domain SINE"
			},
			{
				"name":"Homeo domain ZF"
			},
			{
				"name":"Homeo domain CUT"
			},
			{
				"name":"Homeo domain PROS"
			},
			{
				"name":"Homeo domain TALE"
			},
			{
				"name":"Homeo domain other"
			},
			{
				"name":"Fork head\/winged helix developmental regulators"
			},
			{
				"name":"Fork head\/winged helix tissue-specific regulators"
			},
			{
				"name":"Fork head\/winged helix cell cycle-controlling factors, E2F"
			},
			{
				"name":"Fork head\/winged helix cell cycle-controlling factors, DP"
			},
			{
				"name":"Fork head\/winged helix other regulators"
			},
			{
				"name":"Stork head\/winged helix factors"
			},
			{
				"name":"Heat shock factors"
			},
			{
				"name":"Tryptophan clusters Myb, Myb-factors"
			},
			{
				"name":"Tryptophan clusters Myb, Myb-like factors"
			},
			{
				"name":"Tryptophan clusters Ets-type"
			},
			{
				"name":"Tryptophan clusters interferon-regulating factors"
			},
			{
				"name":"TEA domain"
			},
			{
				"name":"ARID"
			}
			]
		},
		{
			"name":"beta-Scaffold factors with minor groove contacts",
			"children":[
			{
				"name":"RHR (Rel homology region) Rel\/Ankyrin"
			},
			{
				"name":"RHR (Rel homology region) Ankyrin only"
			},
			{
				"name":"RHR (Rel homology region) NF-AT"
			},
			{
				"name":"STAT"
			},
			{
				"name":"p53"
			},
			{
				"name":"MADS-box regulators of differentiation, MEF-2"
			},
			{
				"name":"MADS-box regulators of differentiation, Homeotic genes"
			},
			{
				"name":"MADS-box regulators of differentiation, Yeast regulators"
			},
			{
				"name":"MADS-box responders to external signals"
			},
			{
				"name":"SAND domain-containing proteins"
			},
			{
				"name":"TATA-binding proteins"
			},
			{
				"name":"HMG SOX"
			},
			{
				"name":"HMG TCF-1"
			},
			{
				"name":"HMG TOX"
			},
			{
				"name":"HMG2-related"
			},
			{
				"name":"UBF"
			},
			{
				"name":"Other HMG box factors"
			},
			{
				"name":"Heteromeric CCAAT factors"
			},
			{
				"name":"Grainyhead"
			},
			{
				"name":"Cold-shock domain factors, DbpA-like"
			},
			{
				"name":"Cold-shock domain factors, YB-1\/DbpB-like"
			},
			{
				"name":"Cold-shock domain factors, FRG Y2-like"
			},
			{
				"name":"Runt"
			},
			{
				"name":"MYRF"
			}
			]
		},
		{
			"name":"Other transcription factors",
			"children":[
			{
				"name":"HMGI(Y)"
			},
			{
				"name":"NUPR"
			},
			{
				"name":"Pocket domain Rb"
			},
			{
				"name":"Pocket domain CBP"
			},
			{
				"name":"T-box"
			},
			{
				"name":"DMRT"
			},
			{
				"name":"LRRFIP"
			},
			{
				"name":"TCP"
			},
			{
				"name":"AP2\/ERF"
			},
			{
				"name":"WRKY"
			},
			{
				"name":"LOB"
			},
			{
				"name":"GRAS"
			},
			{
				"name":"NAC"
			},
			{
				"name":"Copper-fist proteins fungal regulators"
			},
			{
				"name":"Others"
			}
			]
		}
		]
	},
	{
		"name":"Prokaryotic type",
		"children":[
		{
			"name":"Helix-turn-helix",
			"children":[
			{
				"name":"AraC family",
				"children":[
				{
					"name":"HF677_019595 araC; arabinose operon transcriptional regulator AraC\tK02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein"
				},
				{
					"name":"HF677_022810 rhaR; HTH-type transcriptional activator RhaR\tK02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR"
				},
				{
					"name":"HF677_022815 rhaS; HTH-type transcriptional activator RhaS\tK02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS"
				},
				{
					"name":"HF677_013265 chbR; transcriptional regulator ChbR\tK03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon"
				},
				{
					"name":"HF677_021710 AraC family transcriptional regulator\tK03755 adiY; AraC family transcriptional regulator, transcriptional activator of adiA"
				},
				{
					"name":"HF677_006810 eutR; HTH-type transcriptional regulator EutR\tK04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator"
				},
				{
					"name":"HF677_021980 soxS; superoxide response transcriptional regulator SoxS\tK13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator"
				},
				{
					"name":"HF677_011995 marA; MDR efflux pump AcrAB transcriptional activator MarA\tK13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator"
				},
				{
					"name":"HF677_019995 robA; MDR efflux pump AcrAB transcriptional activator RobA\tK05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator"
				},
				{
					"name":"HF677_017030 ramA; RamA family antibiotic efflux transcriptional regulator\tK18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator"
				},
				{
					"name":"HF677_017130 helix-turn-helix transcriptional regulator\tK21746 rclR; AraC family transcriptional regulator, reactive chlorine species (RCS)-specific activator of rcl operon"
				},
				{
					"name":"HF677_005590 melR; transcriptional regulator MelR\tK23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein"
				},
				{
					"name":"HF677_021700 melR; transcriptional regulator MelR\tK23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein"
				},
				{
					"name":"HF677_013560 helix-turn-helix transcriptional regulator\tK25495 nimR; AraC family transcriptional regulator, regulator of nimT"
				},
				{
					"name":"HF677_011495 helix-turn-helix transcriptional regulator\tK07506 K07506; AraC family transcriptional regulator"
				},
				{
					"name":"HF677_007985 ada; bifunctional DNA-binding transcriptional regulator\/O6-methylguanine-DNA methyltransferase Ada\tK10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response \/ methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]"
				},
				{
					"name":"HF677_022200 ftrA; transcriptional regulator FtrA\tK13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA"
				}
				]
			},
			{
				"name":"LysR family",
				"children":[
				{
					"name":"HF677_004540 gcvA; glycine cleavage system transcriptional regulator GcvA\tK03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator"
				},
				{
					"name":"HF677_024315 ilvY; HTH-type transcriptional activator IlvY\tK02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC"
				},
				{
					"name":"HF677_024555 metR; HTH-type transcriptional regulator MetR\tK03576 metR; LysR family transcriptional regulator, regulator for metE and metH"
				},
				{
					"name":"HF677_019845 nhaR; transcriptional activator NhaR\tK03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA"
				},
				{
					"name":"HF677_022510 oxyR; DNA-binding transcriptional regulator OxyR\tK04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator"
				},
				{
					"name":"HF677_004055 argP; DNA-binding transcriptional regulator ArgP\tK05596 argP; LysR family transcriptional regulator, arginine and lysine transport system\/DNA replication regulator"
				},
				{
					"name":"HF677_019530 leuO; transcriptional regulator LeuO\tK05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon"
				},
				{
					"name":"HF677_006330 hcaR; DNA-binding transcriptional regulator HcaR\tK05817 hcaR; LysR family transcriptional regulator, hca operon transcriptional activator"
				},
				{
					"name":"HF677_002775 tdcA; transcriptional regulator TdcA\tK07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator"
				},
				{
					"name":"HF677_010995 cysB; HTH-type transcriptional regulator CysB\tK13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator"
				},
				{
					"name":"HF677_014405 cbl; HTH-type transcriptional regulator Cbl\tK13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator"
				},
				{
					"name":"HF677_000120 dsdC; DNA-binding transcriptional regulator DsdC\tK13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator"
				},
				{
					"name":"HF677_016470 tcuR; tricarballylate utilization LysR family transcriptional regulator TcuR\tK13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC"
				},
				{
					"name":"HF677_010320 LysR family transcriptional regulator\tK16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA"
				},
				{
					"name":"HF677_011865 LysR family transcriptional regulator\tK17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator"
				},
				{
					"name":"HF677_021180 LysR family transcriptional regulator\tK17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase"
				},
				{
					"name":"HF677_014410 nac; nitrogen assimilation transcriptional regulator\tK19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein"
				},
				{
					"name":"HF677_002525 LysR family transcriptional regulator\tK21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT"
				},
				{
					"name":"HF677_008295 hypT; hypochlorite stress DNA-binding transcriptional regulator HypT\tK21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT"
				},
				{
					"name":"HF677_002205 aaeR; HTH-type transcriptional activator AaeR\tK21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon"
				},
				{
					"name":"HF677_003170 LysR family transcriptional regulator\tK21742 ttdR; LysR family transcriptional regulator, transcriptional activator for ttdABT operon"
				},
				{
					"name":"HF677_024265 hdfR; HTH-type transcriptional regulator HdfR\tK23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator"
				}
				]
			},
			{
				"name":"DeoR family",
				"children":[
				{
					"name":"HF677_000160 DeoR family transcriptional regulator\tK11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor"
				},
				{
					"name":"HF677_015570 deoR; DNA-binding transcriptional repressor DeoR\tK11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor"
				},
				{
					"name":"HF677_001390 DeoR\/GlpR family transcriptional regulator\tK02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor"
				},
				{
					"name":"HF677_002730 DeoR family transcriptional regulator\tK02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor"
				},
				{
					"name":"HF677_004555 fucR; L-fucose operon activator\tK02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator"
				},
				{
					"name":"HF677_005200 DNA-binding transcriptional repressor\tK02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor"
				},
				{
					"name":"HF677_021015 ulaR; HTH-type transcriptional regulator UlaR\tK03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor"
				},
				{
					"name":"HF677_022965 DeoR\/GlpR transcriptional regulator\tK27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor"
				}
				]
			},
			{
				"name":"LacI family",
				"children":[
				{
					"name":"HF677_018235 LacI family DNA-binding transcriptional regulator\tK27069 lacI; LacI family transcriptional regulator, lactose operon repressor"
				},
				{
					"name":"HF677_000730 XylR family transcriptional regulator\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor"
				},
				{
					"name":"HF677_004395 galR; HTH-type transcriptional regulator GalR\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor"
				},
				{
					"name":"HF677_008360 galS; HTH-type transcriptional regulator GalS\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor"
				},
				{
					"name":"HF677_016500 LacI family transcriptional regulator\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor"
				},
				{
					"name":"HF677_019765 LacI family transcriptional regulator\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor"
				},
				{
					"name":"HF677_023125 rbsR; ribose operon transcriptional repressor RbsR\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor"
				},
				{
					"name":"HF677_000830 LacI family DNA-binding transcriptional regulator\tK02525 kdgR; LacI family transcriptional regulator, kdg operon repressor"
				},
				{
					"name":"HF677_022660 cytR; DNA-binding transcriptional regulator CytR\tK05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG"
				},
				{
					"name":"HF677_019515 cra; catabolite repressor\/activator\tK03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor"
				},
				{
					"name":"HF677_004595 substrate-binding domain-containing protein\tK03484 scrR; LacI family transcriptional regulator, sucrose operon repressor"
				},
				{
					"name":"HF677_020700 treR; HTH-type transcriptional regulator TreR\tK03485 treR; LacI family transcriptional regulator, trehalose operon repressor"
				},
				{
					"name":"HF677_005165 LacI family DNA-binding transcriptional regulator\tK03487 ascG; LacI family transcriptional regulator, asc operon repressor"
				},
				{
					"name":"HF677_012495 purR; HTH-type transcriptional repressor PurR\tK03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor"
				},
				{
					"name":"HF677_001320 gntR; gluconate operon transcriptional repressor GntR\tK06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor"
				},
				{
					"name":"HF677_011725 LacI family DNA-binding transcriptional regulator\tK06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor"
				},
				{
					"name":"HF677_020555 LacI family DNA-binding transcriptional regulator\tK06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator"
				},
				{
					"name":"HF677_002990 ebgR; transcriptional regulator EbgR\tK12113 ebgR; LacI family transcriptional regulator, ebg operon repressor"
				},
				{
					"name":"HF677_012300 Mal regulon transcriptional regulator MalI\tK16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein"
				}
				]
			},
			{
				"name":"GntR family",
				"children":[
				{
					"name":"HF677_000065 GntR family transcriptional regulator\tK03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator"
				},
				{
					"name":"HF677_021785 phnF; phosphonate metabolism transcriptional regulator PhnF\tK02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein"
				},
				{
					"name":"HF677_015910 histidine utilization repressor\tK05836 hutC; GntR family transcriptional regulator, histidine utilization repressor"
				},
				{
					"name":"HF677_016275 GntR family transcriptional regulator\tK11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport\/metabolism system repressor"
				},
				{
					"name":"HF677_010370 fadR; fatty acid metabolism transcriptional regulator FadR\tK03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA"
				},
				{
					"name":"HF677_019350 pdhR; pyruvate dehydrogenase complex transcriptional repressor PdhR\tK05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex"
				},
				{
					"name":"HF677_020335 uxuR; Uxu operon transcriptional regulator\tK13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor"
				},
				{
					"name":"HF677_002880 exuR; transcriptional regulator ExuR\tK19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor"
				},
				{
					"name":"HF677_000610 lldR; transcriptional regulator LldR\tK14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator"
				},
				{
					"name":"HF677_002290 nanR; transcriptional regulator NanR\tK22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor"
				},
				{
					"name":"HF677_005380 PLP-dependent aminotransferase family protein\tK00375 K00375; GntR family transcriptional regulator \/ MocR family aminotransferase"
				},
				{
					"name":"HF677_008195 PLP-dependent aminotransferase family protein\tK00375 K00375; GntR family transcriptional regulator \/ MocR family aminotransferase"
				},
				{
					"name":"HF677_012760 PLP-dependent aminotransferase family protein\tK00375 K00375; GntR family transcriptional regulator \/ MocR family aminotransferase"
				},
				{
					"name":"HF677_005425 csiR; DNA-binding transcriptional regulator CsiR\tK15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator"
				},
				{
					"name":"HF677_012055 GntR family transcriptional regulator\tK22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor"
				},
				{
					"name":"HF677_020215 GntR family transcriptional regulator\tK23015 lgoR; GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism"
				}
				]
			},
			{
				"name":"TetR\/AcrR family",
				"children":[
				{
					"name":"HF677_017540 acrR; multidrug efflux transporter transcriptional repressor AcrR\tK03577 acrR; TetR\/AcrR family transcriptional regulator, acrAB operon repressor"
				},
				{
					"name":"HF677_000440 slmA; nucleoid occlusion factor SlmA\tK05501 slmA; TetR\/AcrR family transcriptional regulator"
				},
				{
					"name":"HF677_014845 rutR; HTH-type transcriptional regulator RutR\tK09017 rutR; TetR\/AcrR family transcriptional regulator"
				},
				{
					"name":"HF677_012450 TetR\/AcrR family transcriptional regulator\tK16137 nemR; TetR\/AcrR family transcriptional regulator, transcriptional repressor for nem operon"
				},
				{
					"name":"HF677_002095 envR; acrEF\/envCD operon transcriptional regulator\tK18140 envR; TetR\/AcrR family transcriptional regulator, acrEF\/envCD operon repressor"
				},
				{
					"name":"HF677_014335 comR; TetR family copper-responsive transcriptional repressor ComR\tK22041 comR; TetR\/AcrR family transcriptional regulator, copper-responsive repressor"
				},
				{
					"name":"HF677_022500 fabR; HTH-type transcriptional repressor FabR\tK22105 fabR; TetR\/AcrR family transcriptional regulator, fatty acid biosynthesis regulator"
				},
				{
					"name":"HF677_015780 cecR; transcriptional regulator CecR\tK23777 cecR; TetR\/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity"
				},
				{
					"name":"HF677_015540 TetR\/AcrR family transcriptional regulator\tK23778 rcdA; TetR\/AcrR family transcriptional regulator, regulator of biofilm formation and stress response"
				}
				]
			},
			{
				"name":"Lrp\/AsnC family",
				"children":[
				{
					"name":"HF677_023175 asnC; transcriptional regulator AsnC\tK03718 asnC; Lrp\/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA"
				},
				{
					"name":"HF677_015410 lrp; leucine-responsive transcriptional regulator Lrp\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein"
				},
				{
					"name":"HF677_017655 decR; DNA-binding transcriptional regulator DecR\tK05800 decR; Lrp\/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator"
				}
				]
			},
			{
				"name":"LuxR family",
				"children":[
				{
					"name":"HF677_009725 sdiA; transcriptional regulator SdiA\tK07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA"
				},
				{
					"name":"HF677_009580 rcsA; transcriptional regulator RcsA\tK07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor"
				},
				{
					"name":"HF677_000275 helix-turn-helix transcriptional regulator\tK04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein"
				},
				{
					"name":"HF677_014760 csgD; transcriptional regulator CsgD\tK04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein"
				},
				{
					"name":"HF677_020165 bglJ; DNA-binding transcriptional activator BglJ\tK22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides"
				},
				{
					"name":"HF677_001395 malT; HTH-type transcriptional regulator MalT\tK03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein"
				}
				]
			},
			{
				"name":"MarR family",
				"children":[
				{
					"name":"HF677_012415 slyA; transcriptional regulator SlyA\tK06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin"
				},
				{
					"name":"HF677_005315 emrR; multidrug efflux transporter EmrAB transcriptional repressor EmrR\tK15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB"
				}
				]
			},
			{
				"name":"MerR family",
				"children":[
				{
					"name":"HF677_017405 cueR; Cu(I)-responsive transcriptional regulator\tK19591 cueR; MerR family transcriptional regulator, copper efflux regulator"
				},
				{
					"name":"HF677_001955 zntR; Zn(2+)-responsive transcriptional regulator\tK13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA"
				},
				{
					"name":"HF677_021975 soxR; redox-sensitive transcriptional activator SoxR\tK13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR"
				},
				{
					"name":"HF677_008510 mlrA; HTH-type transcriptional regulator MlrA\tK21089 mlrA; MerR family transcriptional regulator, activator of the csg genes"
				},
				{
					"name":"HF677_010490 MerR family transcriptional regulator\tK21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes"
				}
				]
			},
			{
				"name":"Fur family",
				"children":[
				{
					"name":"HF677_016465 fur; ferric iron uptake transcriptional regulator\tK03711 fur; Fur family transcriptional regulator, ferric uptake regulator"
				},
				{
					"name":"HF677_022050 zur; zinc uptake transcriptional repressor Zur\tK09823 zur; Fur family transcriptional regulator, zinc uptake regulator"
				}
				]
			},
			{
				"name":"IclR family",
				"children":[
				{
					"name":"HF677_022225 iclR; glyoxylate bypass operon transcriptional repressor IclR\tK13641 iclR; IclR family transcriptional regulator, acetate operon repressor"
				},
				{
					"name":"HF677_018200 mhpR; DNA-binding transcriptional activator MhpR\tK05818 mhpR; IclR family transcriptional regulator, mhp operon transcriptional activator"
				},
				{
					"name":"HF677_010170 kdgR; DNA-binding transcriptional regulator KdgR\tK19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor"
				}
				]
			},
			{
				"name":"CRP\/FNR family",
				"children":[
				{
					"name":"HF677_001630 crp; cAMP-activated global transcriptional regulator CRP\tK10914 crp; CRP\/FNR family transcriptional regulator, cyclic AMP receptor protein"
				},
				{
					"name":"HF677_004955 Crp\/Fnr family transcriptional regulator\tK01420 fnr; CRP\/FNR family transcriptional regulator, anaerobic regulatory protein"
				},
				{
					"name":"HF677_011275 fnr; fumarate\/nitrate reduction transcriptional regulator Fnr\tK01420 fnr; CRP\/FNR family transcriptional regulator, anaerobic regulatory protein"
				},
				{
					"name":"HF677_018480 Crp\/Fnr family transcriptional regulator\tK01420 fnr; CRP\/FNR family transcriptional regulator, anaerobic regulatory protein"
				}
				]
			},
			{
				"name":"Rrf2 family",
				"children":[
				{
					"name":"HF677_006415 iscR; Fe-S cluster assembly transcriptional regulator IscR\tK13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor"
				},
				{
					"name":"HF677_021050 nsrR; nitric oxide-sensing transcriptional repressor NsrR\tK13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor"
				}
				]
			},
			{
				"name":"ArsR family",
				"children":[
				{
					"name":"HF677_009825 transcriptional regulator\tK03892 arsR; ArsR family transcriptional regulator, arsenate\/arsenite\/antimonite-responsive transcriptional repressor"
				}
				]
			},
			{
				"name":"XRE family",
				"children":[
				{
					"name":"HF677_011505 helix-turn-helix transcriptional regulator\tK23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization"
				}
				]
			},
			{
				"name":"PadR family"
			},
			{
				"name":"Other families",
				"children":[
				{
					"name":"HF677_015680 mntR; manganese-binding transcriptional regulator MntR\tK11924 mntR; DtxR family transcriptional regulator, manganese transport regulator"
				},
				{
					"name":"HF677_013790 MurR\/RpiR family transcriptional regulator\tK19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator"
				},
				{
					"name":"HF677_022445 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase\/biotin operon repressor BirA\tK03524 birA; BirA family transcriptional regulator, biotin operon repressor \/ biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]"
				},
				{
					"name":"HF677_002110 fis; DNA-binding transcriptional regulator Fis\tK03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein"
				},
				{
					"name":"HF677_020010 trpR; trp operon repressor\tK03720 trpR; TrpR family transcriptional regulator, trp operon repressor"
				},
				{
					"name":"HF677_018275 prpR; propionate catabolism operon regulatory protein PrpR\tK02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein"
				},
				{
					"name":"HF677_002450 sfsB; DNA-binding transcriptional regulator SfsB\tK07724 ner; Ner family transcriptional regulator"
				},
				{
					"name":"HF677_019570 sgrR; HTH-type transcriptional regulator SgrR\tK11925 sgrR; SgrR family transcriptional regulator"
				},
				{
					"name":"HF677_020025 nadR; multifunctional transcriptional regulator\/nicotinamide-nucleotide adenylyltransferase\/ribosylnicotinamide kinase NadR\tK06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]"
				},
				{
					"name":"HF677_018370 puuR; HTH-type transcriptional regulator PuuR\tK14056 puuR; HTH-type transcriptional regulator, repressor for puuD"
				},
				{
					"name":"HF677_014145 helix-turn-helix domain-containing protein\tK22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor"
				},
				{
					"name":"HF677_022940 helix-turn-helix domain-containing protein\tK18831 higA; HTH-type transcriptional regulator \/ antitoxin HigA"
				},
				{
					"name":"HF677_005190 norR; nitric oxide reductase transcriptional regulator NorR\tK12266 norR; anaerobic nitric oxide reductase transcription regulator"
				},
				{
					"name":"HF677_005070 flhA; formate hydrogenlyase transcriptional activator FlhA\tK15836 fhlA; formate hydrogenlyase transcriptional activator"
				},
				{
					"name":"HF677_019120 cdaR; DNA-binding transcriptional regulator CdaR\tK02647 cdaR; carbohydrate diacid regulator"
				},
				{
					"name":"HF677_016020 modE; molybdenum-dependent transcriptional regulator\tK02019 modE; molybdate transport system regulatory protein"
				},
				{
					"name":"HF677_000800 HTH-type transcriptional regulator\tK07726 K07726; putative transcriptional regulator"
				}
				]
			}
			]
		},
		{
			"name":"Ribbon-helix-helix",
			"children":[
			{
				"name":"CopG family",
				"children":[
				{
					"name":"HF677_001135 nikR; nickel-responsive transcriptional regulator NikR\tK07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator"
				}
				]
			},
			{
				"name":"Other families",
				"children":[
				{
					"name":"HF677_022635 metJ; met regulon transcriptional regulator MetJ\tK03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor"
				},
				{
					"name":"HF677_014835 putA; trifunctional transcriptional regulator\/proline dehydrogenase\/L-glutamate gamma-semialdehyde dehydrogenase\tK13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor \/ proline dehydrogenase \/ delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]"
				}
				]
			}
			]
		},
		{
			"name":"Other transcription factors",
			"children":[
			{
				"name":"BglG family",
				"children":[
				{
					"name":"HF677_022880 HTH domain-containing protein\tK18531 frvR; putative frv operon regulatory protein"
				}
				]
			},
			{
				"name":"Others",
				"children":[
				{
					"name":"HF677_011425 metal\/formaldehyde-sensitive transcriptional repressor\tK23239 frmR; FrmR\/RcnR family transcriptional regulator, repressor of frmRAB operon"
				},
				{
					"name":"HF677_004335 rcnR; Ni(II)\/Co(II)-binding transcriptional repressor RcnR\tK23240 rcnR; FrmR\/RcnR family transcriptional regulator, repressor of rcnA expression"
				},
				{
					"name":"HF677_017720 bolA; transcriptional regulator BolA\tK05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator"
				},
				{
					"name":"HF677_024115 ParB\/RepB\/Spo0J family partition protein\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein"
				},
				{
					"name":"HF677_024190 ParB\/RepB\/Spo0J family partition protein\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein"
				},
				{
					"name":"HF677_001105 glycerol-3-phosphate responsive antiterminator\tK02443 glpP; glycerol uptake operon antiterminator"
				},
				{
					"name":"HF677_024615 rfaH; transcription\/translation regulatory transformer protein RfaH\tK05785 rfaH; transcriptional antiterminator RfaH"
				},
				{
					"name":"HF677_002235 argR; transcriptional regulator ArgR\tK03402 argR; transcriptional regulator of arginine metabolism"
				},
				{
					"name":"HF677_016535 ROK family transcriptional regulator\tK02565 nagC; N-acetylglucosamine repressor"
				},
				{
					"name":"HF677_012140 ROK family transcriptional regulator\tK15545 mlc; transcriptional regulator of PTS gene"
				},
				{
					"name":"HF677_000640 MltR family transcriptional regulator\tK02562 mtlR; mannitol operon repressor"
				},
				{
					"name":"HF677_011215 tyrR; transcriptional regulator TyrR\tK03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport"
				},
				{
					"name":"HF677_006640 glycine cleavage system transcriptional repressor\tK03567 gcvR; glycine cleavage system transcriptional repressor"
				},
				{
					"name":"HF677_011115 pspF; phage shock protein operon transcriptional activator\tK03974 pspF; psp operon transcriptional activator"
				},
				{
					"name":"HF677_011130 pspC; envelope stress response membrane protein PspC\tK03973 pspC; phage shock protein C"
				},
				{
					"name":"HF677_003040 dhaR; PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR\tK05880 dhaR; transcriptional activator for dhaKLM operon"
				},
				{
					"name":"HF677_016810 rnk; nucleoside diphosphate kinase regulator\tK06140 rnk; regulator of nucleoside diphosphate kinase"
				},
				{
					"name":"HF677_020490 AlpA family transcriptional regulator\tK07733 alpA; prophage regulatory protein"
				},
				{
					"name":"HF677_021500 AlpA family phage regulatory protein\tK07733 alpA; prophage regulatory protein"
				},
				{
					"name":"HF677_003900 YqgE\/AlgH family protein\tK07735 algH; putative transcriptional regulator"
				},
				{
					"name":"HF677_019745 caiF; carnitine metabolism transcriptional regulator CaiF\tK08277 caiF; transcriptional activator CaiF"
				},
				{
					"name":"HF677_019205 dksA; RNA polymerase-binding protein DksA\tK06204 dksA; RNA polymerase-binding transcription factor"
				},
				{
					"name":"HF677_017865 nrdR; transcriptional regulator NrdR\tK07738 nrdR; transcriptional repressor NrdR"
				},
				{
					"name":"HF677_018500 crl; sigma factor-binding protein Crl\tK11926 crl; sigma factor-binding protein Crl"
				},
				{
					"name":"HF677_005700 cell division protein\tK22302 dicC; transcriptional repressor of cell division inhibition gene dicB"
				},
				{
					"name":"HF677_014140 transcriptional regulator\tK22302 dicC; transcriptional repressor of cell division inhibition gene dicB"
				},
				{
					"name":"HF677_019510 mraZ; division\/cell wall cluster transcriptional repressor MraZ\tK03925 mraZ; transcriptional regulator MraZ"
				},
				{
					"name":"HF677_017245 fimbriae Y protein\tK08088 fimY; fimbrial regulator"
				}
				]
			}
			]
		}
		]
	}
	]
}