{
	"name":"cmar03009",
	"children":[
	{
		"name":"Eukaryotic type",
		"children":[
		{
			"name":"Sno RNPs",
			"children":[
			{
				"name":"Box C\/D snoRNPs"
			},
			{
				"name":"Box H\/ACA snoRNPs"
			}
			]
		},
		{
			"name":"90S particles",
			"children":[
			{
				"name":"U3 small nucleolar RNA-associated proteins"
			},
			{
				"name":"Helicases"
			},
			{
				"name":"GTPase"
			},
			{
				"name":"RNase",
				"children":[
				{
					"name":"IMCC12053_1522 ribonuclease III\tK03685 rnc; ribonuclease III [EC:3.1.26.3]"
				}
				]
			},
			{
				"name":"Kinase"
			},
			{
				"name":"Other 90S particles"
			}
			]
		},
		{
			"name":"Pre-40S particles",
			"children":[
			{
				"name":"Kinases"
			},
			{
				"name":"Export and cytoplasmic maturation factors"
			},
			{
				"name":"Other pre-40S particles"
			}
			]
		},
		{
			"name":"Pre-60S particles",
			"children":[
			{
				"name":"Helicases"
			},
			{
				"name":"GTPases"
			},
			{
				"name":"RNases",
				"children":[
				{
					"name":"RNase MRP"
				}
				]
			},
			{
				"name":"Kinases"
			},
			{
				"name":"Export and cytoplasmic maturation factors"
			},
			{
				"name":"55LCC heterohexameric ATPase complex"
			},
			{
				"name":"5-FMC complex"
			},
			{
				"name":"Ribosome quality control proteins"
			},
			{
				"name":"Other pre-60S particles"
			}
			]
		},
		{
			"name":"Other ribosome biogenesis factors",
			"children":[
			{
				"name":"IMCC12053_1521 GTP-binding protein Era\tK03595 era; GTPase"
			},
			{
				"name":"IMCC12053_569 GTP-binding protein Obg\tK03979 obgE; GTPase [EC:3.6.5.-]"
			}
			]
		}
		]
	},
	{
		"name":"Prokaryotic type",
		"children":[
		{
			"name":"Sno RNPs",
			"children":[
			{
				"name":"Box C\/D snoRNPs"
			},
			{
				"name":"Box H\/ACA snoRNPs"
			}
			]
		},
		{
			"name":"rRNA transcription factors",
			"children":[
			{
				"name":"IMCC12053_2164 DnaK suppressor protein\tK06204 dksA; RNA polymerase-binding transcription factor"
			},
			{
				"name":"IMCC12053_2268 C4-type zinc finger protein, DksA\/TraR family\tK06204 dksA; RNA polymerase-binding transcription factor"
			},
			{
				"name":"IMCC12053_1809 transcription termination protein NusA\tK02600 nusA; transcription termination\/antitermination protein NusA"
			},
			{
				"name":"IMCC12053_882 transcription termination protein NusB\tK03625 nusB; transcription antitermination protein NusB"
			},
			{
				"name":"IMCC12053_1493 transcription antitermination protein NusG\tK02601 nusG; transcription termination\/antitermination protein NusG"
			}
			]
		},
		{
			"name":"rRNA modification factors",
			"children":[
			{
				"name":"16S rRNA modification factors",
				"children":[
				{
					"name":"IMCC12053_308 SSU rRNA (adenine(1518)-N(6)\/adenine(1519)-N(6))-dimethyltransferase\tK02528 ksgA; 16S rRNA (adenine1518-N6\/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]"
				},
				{
					"name":"IMCC12053_1954 16S rRNA m(5)C 967 methyltransferase\tK03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]"
				},
				{
					"name":"IMCC12053_646 sun protein\tK03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]"
				},
				{
					"name":"IMCC12053_1257 ribosomal RNA small subunit methyltransferase C\tK00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]"
				},
				{
					"name":"IMCC12053_1593 16S rRNA (guanine(966)-N(2))-methyltransferase SSU rRNA m(2)G966\tK08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]"
				},
				{
					"name":"IMCC12053_1347 ribosomal RNA small subunit methyltransferase E\tK09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]"
				},
				{
					"name":"IMCC12053_1776 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB\tK03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]"
				},
				{
					"name":"IMCC12053_834 rRNA small subunit methyltransferase H\tK03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]"
				},
				{
					"name":"IMCC12053_2988 rRNA small subunit methyltransferase I\tK07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]"
				},
				{
					"name":"IMCC12053_191 hypothetical protein\tK15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]"
				}
				]
			},
			{
				"name":"23S rRNA modification factors",
				"children":[
				{
					"name":"IMCC12053_856 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB\tK03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]"
				},
				{
					"name":"IMCC12053_583 Heat shock protein FtsJ\/RrmJ, ribosomal RNA large subunit methyltransferase E\tK02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]"
				},
				{
					"name":"IMCC12053_2324 ribosomal RNA large subunit methyltransferase F\tK06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]"
				},
				{
					"name":"IMCC12053_1673 LSU m3Psi1915 methyltransferase RlmH\tK00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]"
				},
				{
					"name":"IMCC12053_2279 LSU m5C1962 methyltransferase RlmI\tK06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]"
				},
				{
					"name":"IMCC12053_528 protein involved in catabolism of external DNA\tK07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]"
				},
				{
					"name":"IMCC12053_1659 ribosomal RNA large subunit methyltransferase N\tK06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]"
				},
				{
					"name":"IMCC12053_1795 23S rRNA (Uracil-5-) -methyltransferase RumA\tK03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]"
				},
				{
					"name":"IMCC12053_1935 ribosomal large subunit pseudouridine synthase A\tK06177 rluA; tRNA pseudouridine32 synthase \/ 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]"
				},
				{
					"name":"IMCC12053_988 ribosomal large subunit pseudouridine synthase B\tK06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]"
				},
				{
					"name":"IMCC12053_3058 ribosomal large subunit pseudouridine synthase C\tK06179 rluC; 23S rRNA pseudouridine955\/2504\/2580 synthase [EC:5.4.99.24]"
				},
				{
					"name":"IMCC12053_878 ribosomal large subunit pseudouridine synthase D\tK06180 rluD; 23S rRNA pseudouridine1911\/1915\/1917 synthase [EC:5.4.99.23]"
				},
				{
					"name":"IMCC12053_429 ribosomal large subunit pseudouridine synthase E\tK06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]"
				}
				]
			}
			]
		},
		{
			"name":"ribosomal protein modification factors",
			"children":[
			{
				"name":"IMCC12053_2996 ribosomal-protein-S18p-alanineacetyltransferase\tK03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase \/ [ribosomal protein L31]-L-lysine N-acetyltransferase [EC:2.3.1.266 2.3.1.338]"
			},
			{
				"name":"IMCC12053_2667 ribosomal-protein-S5p-alanineacetyltransferase\tK03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]"
			},
			{
				"name":"IMCC12053_2262 Ribosomal protein S6 glutaminyl transferase\tK05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]"
			},
			{
				"name":"IMCC12053_1203 16S rRNA processing protein RimM\tK02860 rimM; 16S rRNA processing protein RimM"
			},
			{
				"name":"IMCC12053_1075 ribosomal protein S12p Asp88 methylthiotransferase\tK14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]"
			},
			{
				"name":"IMCC12053_2722 ribosomal protein L11 methyltransferase\tK02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]"
			}
			]
		},
		{
			"name":"rRNA processing factors",
			"children":[
			{
				"name":"IMCC12053_1522 ribonuclease III\tK03685 rnc; ribonuclease III [EC:3.1.26.3]"
			},
			{
				"name":"IMCC12053_2066 ribonuclease E\tK08300 rne; ribonuclease E [EC:3.1.26.12]"
			},
			{
				"name":"IMCC12053_348 putative Holliday junction resolvase YggF\tK07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]"
			}
			]
		},
		{
			"name":"rRNA helicases",
			"children":[
			{
				"name":"IMCC12053_1279 helicase domain protein\tK05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]"
			}
			]
		},
		{
			"name":"GTPases",
			"children":[
			{
				"name":"IMCC12053_1521 GTP-binding protein Era\tK03595 era; GTPase"
			},
			{
				"name":"IMCC12053_1270 putative GTPase-like EngC\tK06949 rsgA; ribosome biogenesis GTPase \/ thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]"
			},
			{
				"name":"IMCC12053_277 GTP-binding protein EngA\tK03977 engA; GTPase"
			},
			{
				"name":"IMCC12053_569 GTP-binding protein Obg\tK03979 obgE; GTPase [EC:3.6.5.-]"
			},
			{
				"name":"IMCC12053_588 GTP-binding protein HflX\tK03665 hflX; GTPase"
			}
			]
		},
		{
			"name":"Other maturation factors",
			"children":[
			{
				"name":"IMCC12053_1007 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA\tK07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]"
			},
			{
				"name":"IMCC12053_1527 GTP pyrophosphokinase, (p)ppGpp synthetase II\tK01139 spoT; GTP diphosphokinase \/ guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]"
			},
			{
				"name":"IMCC12053_1950 ribosome-binding factor A\tK02834 rbfA; ribosome-binding factor A"
			},
			{
				"name":"IMCC12053_1808 hypothetical protein\tK09748 rimP; ribosome maturation factor RimP"
			},
			{
				"name":"IMCC12053_1674 ribosomal silencing factor RsfA (former Iojap)\tK09710 ybeB; ribosome-associated protein"
			},
			{
				"name":"IMCC12053_1414 metal-dependent hydrolase YbeY, involved in rRNA and\/or ribosome maturation and assembly\tK07042 ybeY; probable rRNA maturation factor"
			},
			{
				"name":"IMCC12053_1833 ribosomal subunit interface protein\tK05808 hpf; ribosome hibernation promoting factor"
			},
			{
				"name":"IMCC12053_1388 GTP-binding and nucleic acid-binding protein YchF\tK06942 ychF; ribosome-binding ATPase"
			}
			]
		}
		]
	},
	{
		"name":"Related small nucleolar RNAs",
		"children":[
		{
			"name":"Box C\/D snoRNAs",
			"children":[
			{
				"name":"SnoRNAs involved in processing reactions"
			},
			{
				"name":"SnoRNAs act as guides for 2'-O-ribose methylation"
			}
			]
		},
		{
			"name":"Box H\/ACA snoRNAs",
			"children":[
			{
				"name":"SnoRNAs involved in processing reactions"
			},
			{
				"name":"SnoRNAs act as guides for pseudouridynation"
			}
			]
		},
		{
			"name":"Other snoRNA"
		}
		]
	}
	]
}
