{ "name":"csem03041", "children":[ { "name":"Common components", "children":[ { "name":"Common spliceosomal components", "children":[ { "name":"Cap binding complex", "children":[ { "name":"103391063 ncbp1; nuclear cap-binding protein subunit 1\tK12882 NCBP1; nuclear cap-binding protein subunit 1" }, { "name":"103396342 ncbp2; nuclear cap-binding protein subunit 2\tK12883 NCBP2; nuclear cap-binding protein subunit 2" } ] }, { "name":"hnRNP proteins", "children":[ { "name":"103385130 heterogeneous nuclear ribonucleoprotein A1\tK12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1\/A3" }, { "name":"103391872 hnrnpa3; heterogeneous nuclear ribonucleoprotein A3\tK12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1\/A3" }, { "name":"103385815 heterogeneous nuclear ribonucleoprotein C\tK12884 HNRNPC; heterogeneous nuclear ribonucleoprotein C1\/C2" }, { "name":"103396711 heterogeneous nuclear ribonucleoprotein C-like\tK12884 HNRNPC; heterogeneous nuclear ribonucleoprotein C1\/C2" }, { "name":"103390774 rbmx; RNA-binding motif protein, X chromosome isoform X2\tK12885 RBMX; heterogeneous nuclear ribonucleoprotein G" }, { "name":"103390422 heterogeneous nuclear ribonucleoprotein K-like isoform X2\tK12886 HNRNPK; heterogeneous nuclear ribonucleoprotein K" }, { "name":"103397093 heterogeneous nuclear ribonucleoprotein K-like isoform X1\tK12886 HNRNPK; heterogeneous nuclear ribonucleoprotein K" }, { "name":"103398157 hnrnpk; heterogeneous nuclear ribonucleoprotein K isoform X1\tK12886 HNRNPK; heterogeneous nuclear ribonucleoprotein K" }, { "name":"103393912 hnrnpm; heterogeneous nuclear ribonucleoprotein M isoform X1\tK12887 HNRNPM; heterogeneous nuclear ribonucleoprotein M" }, { "name":"103398516 hnrnpu; heterogeneous nuclear ribonucleoprotein U\tK12888 HNRNPU; heterogeneous nuclear ribonucleoprotein U" } ] }, { "name":"SR proteins", "children":[ { "name":"103378294 serine\/arginine-rich splicing factor 1B\tK12890 SRSF1; serine\/arginine-rich splicing factor 1" }, { "name":"103395123 serine\/arginine-rich splicing factor 1\tK12890 SRSF1; serine\/arginine-rich splicing factor 1" }, { "name":"103381780 srsf2; serine\/arginine-rich splicing factor 2\tK12891 SRSF2_8; serine\/arginine-rich splicing factor 2\/8" }, { "name":"103385776 serine\/arginine-rich splicing factor 3-like isoform X1\tK12892 SRSF3; serine\/arginine-rich splicing factor 3" }, { "name":"103385881 srsf3; serine\/arginine-rich splicing factor 3 isoform X1\tK12892 SRSF3; serine\/arginine-rich splicing factor 3" }, { "name":"103381036 srsf5; serine\/arginine-rich splicing factor 5\tK12893 SRSF4_5_6; serine\/arginine-rich splicing factor 4\/5\/6" }, { "name":"103381207 serine\/arginine-rich splicing factor 5-like\tK12893 SRSF4_5_6; serine\/arginine-rich splicing factor 4\/5\/6" }, { "name":"103384514 srsf6; serine\/arginine-rich splicing factor 6 isoform X1\tK12893 SRSF4_5_6; serine\/arginine-rich splicing factor 4\/5\/6" }, { "name":"103393948 serine\/arginine-rich splicing factor 6-like isoform X1\tK12893 SRSF4_5_6; serine\/arginine-rich splicing factor 4\/5\/6" }, { "name":"103377922 srsf7; serine\/arginine-rich splicing factor 7\tK12896 SRSF7; serine\/arginine-rich splicing factor 7" }, { "name":"103390134 serine\/arginine-rich splicing factor 9-like\tK21123 SRSF9; serine\/arginine-rich splicing factor 9" }, { "name":"103393916 srsf10; serine\/arginine-rich splicing factor 10 isoform X1\tK12900 SRSF10; serine\/arginine-rich splicing factor 10" }, { "name":"103378456 transformer-2 protein homolog beta-like isoform X1\tK12897 TRA2; transformer-2 protein" }, { "name":"103392200 tra2b; transformer-2 protein homolog beta isoform X1\tK12897 TRA2; transformer-2 protein" }, { "name":"103394130 tra2a; transformer-2 protein homolog alpha isoform X1\tK12897 TRA2; transformer-2 protein" } ] }, { "name":"General mRNP proteins", "children":[ { "name":"103379130 ELAV-like protein 1 isoform X1\tK13088 ELAVL1; ELAV-like protein 1" }, { "name":"103398702 ELAV-like protein 1 isoform X1\tK13088 ELAVL1; ELAV-like protein 1" }, { "name":"103394462 ilf2; interleukin enhancer-binding factor 2\tK13089 ILF2; interleukin enhancer-binding factor 2" }, { "name":"103384205 interleukin enhancer-binding factor 3-like isoform X1\tK13090 ILF3; interleukin enhancer-binding factor 3" }, { "name":"103393648 ilf3; interleukin enhancer-binding factor 3\tK13090 ILF3; interleukin enhancer-binding factor 3" }, { "name":"103385498 RNA-binding protein 39\tK13091 RBM23_39; RNA-binding protein 23\/39" }, { "name":"103386831 RNA-binding protein 39-like isoform X1\tK13091 RBM23_39; RNA-binding protein 23\/39" }, { "name":"103384475 ybx1; nuclease-sensitive element-binding protein 1 isoform X1\tK09276 YBX1; Y-box-binding protein 1" }, { "name":"103379750 zc3h18; zinc finger CCCH domain-containing protein 18\tK13092 ZC3H18; nuclear protein NHN1" } ] } ] } ] }, { "name":"Complex A", "children":[ { "name":"U1 snRNP components", "children":[ { "name":"Sm proteins", "children":[ { "name":"103386822 snrpb; small nuclear ribonucleoprotein-associated proteins B and B'\tK11086 SNRPB; small nuclear ribonucleoprotein B and B'" }, { "name":"103394437 snrpd1; small nuclear ribonucleoprotein Sm D1\tK11087 SNRPD1; small nuclear ribonucleoprotein D1" }, { "name":"103377623 snrpd2; small nuclear ribonucleoprotein Sm D2\tK11096 SNRPD2; small nuclear ribonucleoprotein D2" }, { "name":"103389391 snrpd3; small nuclear ribonucleoprotein Sm D3\tK11088 SNRPD3; small nuclear ribonucleoprotein D3" }, { "name":"103386294 snrpe; small nuclear ribonucleoprotein E\tK11097 SNRPE; small nuclear ribonucleoprotein E" }, { "name":"103382608 snrpf; small nuclear ribonucleoprotein F\tK11098 SNRPF; small nuclear ribonucleoprotein F" }, { "name":"103384709 snrpg; small nuclear ribonucleoprotein G\tK11099 SNRPG; small nuclear ribonucleoprotein G" } ] }, { "name":"U1 snRNP specific factors", "children":[ { "name":"103393493 snrnp70; U1 small nuclear ribonucleoprotein 70 kDa\tK11093 SNRP70; U1 small nuclear ribonucleoprotein 70kDa" }, { "name":"103378446 snrpa; U1 small nuclear ribonucleoprotein A\tK11091 SNRPA; U1 small nuclear ribonucleoprotein A" }, { "name":"103386598 snrpc; U1 small nuclear ribonucleoprotein C\tK11095 SNRPC; U1 small nuclear ribonucleoprotein C" } ] }, { "name":"U1 related factors", "children":[ { "name":"103383782 probable ATP-dependent RNA helicase DDX5 isoform X1\tK12823 DDX5; ATP-dependent RNA helicase DDX5\/DBP2 [EC:5.6.2.7]" }, { "name":"103393708 probable ATP-dependent RNA helicase DDX5 isoform X1\tK12823 DDX5; ATP-dependent RNA helicase DDX5\/DBP2 [EC:5.6.2.7]" }, { "name":"103392193 prpf40a; LOW QUALITY PROTEIN: pre-mRNA-processing factor 40 homolog A\tK12821 PRPF40; pre-mRNA-processing factor 40" }, { "name":"103380890 RNA-binding protein 25-like\tK12822 RBM25; RNA-binding protein 25" }, { "name":"103381306 RNA-binding protein 25-like\tK12822 RBM25; RNA-binding protein 25" }, { "name":"103395450 tcerg1; transcription elongation regulator 1 isoform X1\tK12824 TCERG1; transcription elongation regulator 1" } ] } ] }, { "name":"U2 snRNP components", "children":[ { "name":"Sm proteins", "children":[ { "name":"103386822 snrpb; small nuclear ribonucleoprotein-associated proteins B and B'\tK11086 SNRPB; small nuclear ribonucleoprotein B and B'" }, { "name":"103394437 snrpd1; small nuclear ribonucleoprotein Sm D1\tK11087 SNRPD1; small nuclear ribonucleoprotein D1" }, { "name":"103377623 snrpd2; small nuclear ribonucleoprotein Sm D2\tK11096 SNRPD2; small nuclear ribonucleoprotein D2" }, { "name":"103389391 snrpd3; small nuclear ribonucleoprotein Sm D3\tK11088 SNRPD3; small nuclear ribonucleoprotein D3" }, { "name":"103386294 snrpe; small nuclear ribonucleoprotein E\tK11097 SNRPE; small nuclear ribonucleoprotein E" }, { "name":"103382608 snrpf; small nuclear ribonucleoprotein F\tK11098 SNRPF; small nuclear ribonucleoprotein F" }, { "name":"103384709 snrpg; small nuclear ribonucleoprotein G\tK11099 SNRPG; small nuclear ribonucleoprotein G" } ] }, { "name":"U2 snRNP specific factors", "children":[ { "name":"103379037 U2 small nuclear ribonucleoprotein A'-like\tK11092 SNRPA1; U2 small nuclear ribonucleoprotein A'" }, { "name":"103383391 snrpb2; U2 small nuclear ribonucleoprotein B''\tK11094 SNRPB2; U2 small nuclear ribonucleoprotein B''" }, { "name":"103396919 splicing factor 3A subunit 1-like\tK12825 SF3A1; splicing factor 3A subunit 1" }, { "name":"103398042 sf3a1; splicing factor 3A subunit 1\tK12825 SF3A1; splicing factor 3A subunit 1" }, { "name":"103395945 sf3a2; splicing factor 3A subunit 2\tK12826 SF3A2; splicing factor 3A subunit 2" }, { "name":"103394705 sf3a3; splicing factor 3A subunit 3\tK12827 SF3A3; splicing factor 3A subunit 3" }, { "name":"103391643 sf3b1; splicing factor 3B subunit 1 isoform X1\tK12828 SF3B1; splicing factor 3B subunit 1" }, { "name":"103386046 sf3b2; LOW QUALITY PROTEIN: splicing factor 3B subunit 2\tK12829 SF3B2; splicing factor 3B subunit 2" }, { "name":"103379502 sf3b3; splicing factor 3B subunit 3\tK12830 SF3B3; splicing factor 3B subunit 3" }, { "name":"103394266 sf3b4; splicing factor 3B subunit 4\tK12831 SF3B4; splicing factor 3B subunit 4" }, { "name":"103387080 sf3b5; splicing factor 3B subunit 5\tK12832 SF3B5; splicing factor 3B subunit 5" }, { "name":"103380723 sf3b6; splicing factor 3B subunit 6\tK12833 SF3B14; pre-mRNA branch site protein p14" }, { "name":"103392660 ddx42; ATP-dependent RNA helicase DDX42 isoform X2\tK12835 DDX42; ATP-dependent RNA helicase DDX42 [EC:5.6.2.7]" }, { "name":"103382150 phf5a; PHD finger-like domain-containing protein 5A\tK12834 PHF5A; PHD finger-like domain-containing protein 5A" } ] }, { "name":"U2 related factors", "children":[ { "name":"103389252 splicing factor U2AF 35 kDa subunit isoform X1\tK12836 U2AF1; splicing factor U2AF 35 kDa subunit" }, { "name":"103391595 splicing factor U2AF 35 kDa subunit-like\tK12836 U2AF1; splicing factor U2AF 35 kDa subunit" }, { "name":"103387861 splicing factor U2AF 65 kDa subunit-like\tK12837 U2AF2; splicing factor U2AF 65 kDa subunit" }, { "name":"103392513 splicing factor U2AF 65 kDa subunit-like\tK12837 U2AF2; splicing factor U2AF 65 kDa subunit" }, { "name":"103396857 cherp; calcium homeostasis endoplasmic reticulum protein isoform X1\tK12841 CHERP; calcium homeostasis endoplasmic reticulum protein" }, { "name":"103383656 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15\tK12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15\/PRP43 [EC:5.6.2.6]" }, { "name":"103390531 dhx15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1\tK12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15\/PRP43 [EC:5.6.2.6]" }, { "name":"103394945 ddx46; probable ATP-dependent RNA helicase DDX46\tK12811 DDX46; ATP-dependent RNA helicase DDX46\/PRP5 [EC:5.6.2.7]" }, { "name":"103377409 poly(U)-binding-splicing factor PUF60-like isoform X2\tK12838 PUF60; poly(U)-binding-splicing factor PUF60" }, { "name":"103398733 poly(U)-binding-splicing factor PUF60-like\tK12838 PUF60; poly(U)-binding-splicing factor PUF60" }, { "name":"103383117 rbm17; splicing factor 45 isoform X1\tK12840 RBM17; splicing factor 45" }, { "name":"103387644 smndc1; survival of motor neuron-related-splicing factor 30\tK12839 SMNDC1; survival of motor neuron-related-splicing factor 30" }, { "name":"103377160 u2surp; U2 snRNP-associated SURP motif-containing protein isoform X1\tK12842 SR140; U2-associated protein SR140" }, { "name":"103395556 U2 snRNP-associated SURP motif-containing protein-like\tK12842 SR140; U2-associated protein SR140" }, { "name":"103394595 rp9; retinitis pigmentosa 9 protein\tK19604 RP9; retinitis pigmentosa 9 protein" }, { "name":"103379062 zrsr2; U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2\tK24273 ZRSR; U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein" } ] } ] }, { "name":"Other components", "children":[ { "name":"Complex A specific factors", "children":[ { "name":"103381958 bub3; mitotic checkpoint protein BUB3 isoform X1\tK02180 BUB3; cell cycle arrest protein BUB3" }, { "name":"103384915 cyclin-dependent kinase 11B-like isoform X1\tK08818 CDC2L; cell division cycle 2-like [EC:2.7.11.22]" }, { "name":"103395447 htatsf1; LOW QUALITY PROTEIN: HIV Tat-specific factor 1\tK13093 HTATSF1; HIV Tat-specific factor 1" }, { "name":"103385720 rbm5; RNA-binding protein 5 isoform X1\tK13094 RBM5_10; RNA-binding protein 5\/10" }, { "name":"103391650 splicing factor 1\tK13095 SF1; splicing factor 1" }, { "name":"103395955 sugp1; SURP and G-patch domain-containing protein 1\tK13096 SF4; splicing factor 4" }, { "name":"103387319 tet1; methylcytosine dioxygenase TET1\tK13097 TET1; methylcytosine dioxygenase [EC:1.14.11.80]" }, { "name":"103384098 rbm20; RNA-binding protein 20\tK24052 RBM20; RNA-binding protein 20" } ] } ] } ] }, { "name":"Complex B", "children":[ { "name":"U1 snRNP components", "children":[ { "name":"Sm proteins", "children":[ { "name":"103386822 snrpb; small nuclear ribonucleoprotein-associated proteins B and B'\tK11086 SNRPB; small nuclear ribonucleoprotein B and B'" }, { "name":"103394437 snrpd1; small nuclear ribonucleoprotein Sm D1\tK11087 SNRPD1; small nuclear ribonucleoprotein D1" }, { "name":"103377623 snrpd2; small nuclear ribonucleoprotein Sm D2\tK11096 SNRPD2; small nuclear ribonucleoprotein D2" }, { "name":"103389391 snrpd3; small nuclear ribonucleoprotein Sm D3\tK11088 SNRPD3; small nuclear ribonucleoprotein D3" }, { "name":"103386294 snrpe; small nuclear ribonucleoprotein E\tK11097 SNRPE; small nuclear ribonucleoprotein E" }, { "name":"103382608 snrpf; small nuclear ribonucleoprotein F\tK11098 SNRPF; small nuclear ribonucleoprotein F" }, { "name":"103384709 snrpg; small nuclear ribonucleoprotein G\tK11099 SNRPG; small nuclear ribonucleoprotein G" } ] }, { "name":"U1 snRNP specific factors", "children":[ { "name":"103393493 snrnp70; U1 small nuclear ribonucleoprotein 70 kDa\tK11093 SNRP70; U1 small nuclear ribonucleoprotein 70kDa" }, { "name":"103378446 snrpa; U1 small nuclear ribonucleoprotein A\tK11091 SNRPA; U1 small nuclear ribonucleoprotein A" }, { "name":"103386598 snrpc; U1 small nuclear ribonucleoprotein C\tK11095 SNRPC; U1 small nuclear ribonucleoprotein C" } ] }, { "name":"U1 related factors", "children":[ { "name":"103383782 probable ATP-dependent RNA helicase DDX5 isoform X1\tK12823 DDX5; ATP-dependent RNA helicase DDX5\/DBP2 [EC:5.6.2.7]" }, { "name":"103393708 probable ATP-dependent RNA helicase DDX5 isoform X1\tK12823 DDX5; ATP-dependent RNA helicase DDX5\/DBP2 [EC:5.6.2.7]" }, { "name":"103392193 prpf40a; LOW QUALITY PROTEIN: pre-mRNA-processing factor 40 homolog A\tK12821 PRPF40; pre-mRNA-processing factor 40" }, { "name":"103380890 RNA-binding protein 25-like\tK12822 RBM25; RNA-binding protein 25" }, { "name":"103381306 RNA-binding protein 25-like\tK12822 RBM25; RNA-binding protein 25" }, { "name":"103395450 tcerg1; transcription elongation regulator 1 isoform X1\tK12824 TCERG1; transcription elongation regulator 1" } ] } ] }, { "name":"U2 snRNP components", "children":[ { "name":"Sm proteins", "children":[ { "name":"103386822 snrpb; small nuclear ribonucleoprotein-associated proteins B and B'\tK11086 SNRPB; small nuclear ribonucleoprotein B and B'" }, { "name":"103394437 snrpd1; small nuclear ribonucleoprotein Sm D1\tK11087 SNRPD1; small nuclear ribonucleoprotein D1" }, { "name":"103377623 snrpd2; small nuclear ribonucleoprotein Sm D2\tK11096 SNRPD2; small nuclear ribonucleoprotein D2" }, { "name":"103389391 snrpd3; small nuclear ribonucleoprotein Sm D3\tK11088 SNRPD3; small nuclear ribonucleoprotein D3" }, { "name":"103386294 snrpe; small nuclear ribonucleoprotein E\tK11097 SNRPE; small nuclear ribonucleoprotein E" }, { "name":"103382608 snrpf; small nuclear ribonucleoprotein F\tK11098 SNRPF; small nuclear ribonucleoprotein F" }, { "name":"103384709 snrpg; small nuclear ribonucleoprotein G\tK11099 SNRPG; small nuclear ribonucleoprotein G" } ] }, { "name":"U2 snRNP specific factors", "children":[ { "name":"103379037 U2 small nuclear ribonucleoprotein A'-like\tK11092 SNRPA1; U2 small nuclear ribonucleoprotein A'" }, { "name":"103383391 snrpb2; U2 small nuclear ribonucleoprotein B''\tK11094 SNRPB2; U2 small nuclear ribonucleoprotein B''" }, { "name":"103396919 splicing factor 3A subunit 1-like\tK12825 SF3A1; splicing factor 3A subunit 1" }, { "name":"103398042 sf3a1; splicing factor 3A subunit 1\tK12825 SF3A1; splicing factor 3A subunit 1" }, { "name":"103395945 sf3a2; splicing factor 3A subunit 2\tK12826 SF3A2; splicing factor 3A subunit 2" }, { "name":"103394705 sf3a3; splicing factor 3A subunit 3\tK12827 SF3A3; splicing factor 3A subunit 3" }, { "name":"103391643 sf3b1; splicing factor 3B subunit 1 isoform X1\tK12828 SF3B1; splicing factor 3B subunit 1" }, { "name":"103386046 sf3b2; LOW QUALITY PROTEIN: splicing factor 3B subunit 2\tK12829 SF3B2; splicing factor 3B subunit 2" }, { "name":"103379502 sf3b3; splicing factor 3B subunit 3\tK12830 SF3B3; splicing factor 3B subunit 3" }, { "name":"103394266 sf3b4; splicing factor 3B subunit 4\tK12831 SF3B4; splicing factor 3B subunit 4" }, { "name":"103387080 sf3b5; splicing factor 3B subunit 5\tK12832 SF3B5; splicing factor 3B subunit 5" }, { "name":"103380723 sf3b6; splicing factor 3B subunit 6\tK12833 SF3B14; pre-mRNA branch site protein p14" }, { "name":"103392660 ddx42; ATP-dependent RNA helicase DDX42 isoform X2\tK12835 DDX42; ATP-dependent RNA helicase DDX42 [EC:5.6.2.7]" }, { "name":"103382150 phf5a; PHD finger-like domain-containing protein 5A\tK12834 PHF5A; PHD finger-like domain-containing protein 5A" } ] }, { "name":"U2 related factors", "children":[ { "name":"103389252 splicing factor U2AF 35 kDa subunit isoform X1\tK12836 U2AF1; splicing factor U2AF 35 kDa subunit" }, { "name":"103391595 splicing factor U2AF 35 kDa subunit-like\tK12836 U2AF1; splicing factor U2AF 35 kDa subunit" }, { "name":"103387861 splicing factor U2AF 65 kDa subunit-like\tK12837 U2AF2; splicing factor U2AF 65 kDa subunit" }, { "name":"103392513 splicing factor U2AF 65 kDa subunit-like\tK12837 U2AF2; splicing factor U2AF 65 kDa subunit" }, { "name":"103396857 cherp; calcium homeostasis endoplasmic reticulum protein isoform X1\tK12841 CHERP; calcium homeostasis endoplasmic reticulum protein" }, { "name":"103383656 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15\tK12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15\/PRP43 [EC:5.6.2.6]" }, { "name":"103390531 dhx15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1\tK12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15\/PRP43 [EC:5.6.2.6]" }, { "name":"103394945 ddx46; probable ATP-dependent RNA helicase DDX46\tK12811 DDX46; ATP-dependent RNA helicase DDX46\/PRP5 [EC:5.6.2.7]" }, { "name":"103377409 poly(U)-binding-splicing factor PUF60-like isoform X2\tK12838 PUF60; poly(U)-binding-splicing factor PUF60" }, { "name":"103398733 poly(U)-binding-splicing factor PUF60-like\tK12838 PUF60; poly(U)-binding-splicing factor PUF60" }, { "name":"103383117 rbm17; splicing factor 45 isoform X1\tK12840 RBM17; splicing factor 45" }, { "name":"103387644 smndc1; survival of motor neuron-related-splicing factor 30\tK12839 SMNDC1; survival of motor neuron-related-splicing factor 30" }, { "name":"103377160 u2surp; U2 snRNP-associated SURP motif-containing protein isoform X1\tK12842 SR140; U2-associated protein SR140" }, { "name":"103395556 U2 snRNP-associated SURP motif-containing protein-like\tK12842 SR140; U2-associated protein SR140" }, { "name":"103394595 rp9; retinitis pigmentosa 9 protein\tK19604 RP9; retinitis pigmentosa 9 protein" }, { "name":"103379062 zrsr2; U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2\tK24273 ZRSR; U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein" } ] } ] }, { "name":"U4\/U6.U5 tri-snRNP components", "children":[ { "name":"Sm proteins", "children":[ { "name":"103386822 snrpb; small nuclear ribonucleoprotein-associated proteins B and B'\tK11086 SNRPB; small nuclear ribonucleoprotein B and B'" }, { "name":"103394437 snrpd1; small nuclear ribonucleoprotein Sm D1\tK11087 SNRPD1; small nuclear ribonucleoprotein D1" }, { "name":"103377623 snrpd2; small nuclear ribonucleoprotein Sm D2\tK11096 SNRPD2; small nuclear ribonucleoprotein D2" }, { "name":"103389391 snrpd3; small nuclear ribonucleoprotein Sm D3\tK11088 SNRPD3; small nuclear ribonucleoprotein D3" }, { "name":"103386294 snrpe; small nuclear ribonucleoprotein E\tK11097 SNRPE; small nuclear ribonucleoprotein E" }, { "name":"103382608 snrpf; small nuclear ribonucleoprotein F\tK11098 SNRPF; small nuclear ribonucleoprotein F" }, { "name":"103384709 snrpg; small nuclear ribonucleoprotein G\tK11099 SNRPG; small nuclear ribonucleoprotein G" } ] }, { "name":"LSm proteins", "children":[ { "name":"103399951 lsm2; U6 snRNA-associated Sm-like protein LSm2\tK12621 LSM2; U6 snRNA-associated Sm-like protein LSm2" }, { "name":"103386519 lsm3; U6 snRNA-associated Sm-like protein LSm3\tK12622 LSM3; U6 snRNA-associated Sm-like protein LSm3" }, { "name":"103394678 lsm4; U6 snRNA-associated Sm-like protein LSm4\tK12623 LSM4; U6 snRNA-associated Sm-like protein LSm4" }, { "name":"103377155 lsm5; U6 snRNA-associated Sm-like protein LSm5\tK12624 LSM5; U6 snRNA-associated Sm-like protein LSm5" }, { "name":"103383349 lsm6; U6 snRNA-associated Sm-like protein LSm6 isoform X1\tK12625 LSM6; U6 snRNA-associated Sm-like protein LSm6" }, { "name":"103393874 lsm7; U6 snRNA-associated Sm-like protein LSm7\tK12626 LSM7; U6 snRNA-associated Sm-like protein LSm7" }, { "name":"103382508 lsm8; LSM8 homolog, U6 small nuclear RNA associated\tK12627 LSM8; U6 snRNA-associated Sm-like protein LSm8" } ] }, { "name":"U4\/U6 snRNP specific factors", "children":[ { "name":"103388241 prpf3; U4\/U6 small nuclear ribonucleoprotein Prp3\tK12843 PRPF3; U4\/U6 small nuclear ribonucleoprotein PRP3" }, { "name":"103390358 prpf4; U4\/U6 small nuclear ribonucleoprotein Prp4\tK12662 PRPF4; U4\/U6 small nuclear ribonucleoprotein PRP4" }, { "name":"103384481 ppih; peptidyl-prolyl cis-trans isomerase H\tK09567 PPIH; peptidyl-prolyl isomerase H (cyclophilin H) [EC:5.2.1.8]" }, { "name":"103387856 prpf31; U4\/U6 small nuclear ribonucleoprotein Prp31\tK12844 PRPF31; U4\/U6 small nuclear ribonucleoprotein PRP31" }, { "name":"103382356 snu13; NHP2-like protein 1\tK12845 SNU13; U4\/U6 small nuclear ribonucleoprotein SNU13" }, { "name":"103397258 sart3; squamous cell carcinoma antigen recognized by T-cells 3\tK22611 SART3; spliceosome associated factor 3, U4\/U6 recycling protein" }, { "name":"103398623 squamous cell carcinoma antigen recognized by T-cells 3-like\tK22611 SART3; spliceosome associated factor 3, U4\/U6 recycling protein" } ] }, { "name":"U5 snRNP specific factors", "children":[ { "name":"103393137 eftud2; 116 kDa U5 small nuclear ribonucleoprotein component\tK12852 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component" }, { "name":"103384434 prpf6; LOW QUALITY PROTEIN: pre-mRNA-processing factor 6\tK12855 PRPF6; pre-mRNA-processing factor 6" }, { "name":"103378069 prpf8; pre-mRNA-processing-splicing factor 8\tK12856 PRPF8; pre-mRNA-processing factor 8" }, { "name":"103394346 snrnp40; U5 small nuclear ribonucleoprotein 40 kDa protein\tK12857 SNRNP40; Prp8 binding protein" }, { "name":"103397587 snrnp200; U5 small nuclear ribonucleoprotein 200 kDa helicase isoform X1\tK12854 SNRNP200; pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]" }, { "name":"103385412 ddx23; probable ATP-dependent RNA helicase DDX23 isoform X1\tK12858 DDX23; ATP-dependent RNA helicase DDX23\/PRP28 [EC:5.6.2.7]" }, { "name":"103394670 txnl4a; thioredoxin-like protein 4A\tK12859 TXNL4A; U5 snRNP protein, DIM1 family" }, { "name":"103392673 cd2bp2; CD2 antigen cytoplasmic tail-binding protein 2 isoform X1\tK13099 CD2BP2; CD2 antigen cytoplasmic tail-binding protein 2" } ] }, { "name":"U4\/U6.U5 tri-snRNP specific factors", "children":[ { "name":"103383469 sart1; U4\/U6.U5 tri-snRNP-associated protein 1\tK11984 SART1; U4\/U6.U5 tri-snRNP-associated protein 1" }, { "name":"103397464 snrnp27; U4\/U6.U5 small nuclear ribonucleoprotein 27 kDa protein\tK12846 SNRNP27; U4\/U6.U5 tri-snRNP-associated protein 3" } ] }, { "name":"U4\/U6.U5 tri-snRNP related factors", "children":[ { "name":"103395665 zmat2; zinc finger matrin-type protein 2\tK12848 SNU23; U4\/U6.U5 tri-snRNP component SNU23" }, { "name":"103399444 prpf38a; pre-mRNA-splicing factor 38A\tK12849 PRPF38A; pre-mRNA-splicing factor 38A" }, { "name":"103395982 pre-mRNA-splicing factor 38B isoform X2\tK12850 PRPF38B; pre-mRNA-splicing factor 38B" }, { "name":"103391823 cwc22; pre-mRNA-splicing factor CWC22 homolog\tK13100 CWC22; pre-mRNA-splicing factor CWC22" }, { "name":"103390251 skiv2l2; superkiller viralicidic activity 2-like 2\tK12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]" }, { "name":"103388837 dhx16; putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16\tK12813 DHX16; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6]" }, { "name":"103385385 gpkow; LOW QUALITY PROTEIN: G patch domain and KOW motifs-containing protein\tK13101 GPKOW; G patch domain and KOW motifs-containing protein" }, { "name":"103390125 heat shock protein beta-1-like\tK04455 HSPB1; heat shock protein beta-1" }, { "name":"103395180 hspb1; heat shock protein beta-1\tK04455 HSPB1; heat shock protein beta-1" }, { "name":"103397724 ppil2; peptidyl-prolyl cis-trans isomerase-like 2\tK10598 PPIL2; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]" }, { "name":"103396309 znf830; zinc finger protein 830\tK13104 ZNF830; zinc finger protein 830" }, { "name":"103394595 rp9; retinitis pigmentosa 9 protein\tK19604 RP9; retinitis pigmentosa 9 protein" } ] } ] }, { "name":"Other components", "children":[ { "name":"Prp19 complex", "children":[ { "name":"103390974 prpf19; pre-mRNA-processing factor 19\tK10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]" }, { "name":"103387747 cdc5l; cell division cycle 5-like protein\tK12860 CDC5L; pre-mRNA-splicing factor CDC5\/CEF1" }, { "name":"103384908 bcas2; pre-mRNA-splicing factor SPF27\tK12861 BCAS2; pre-mRNA-splicing factor SPF27" }, { "name":"103383609 plrg1; pleiotropic regulator 1\tK12862 PLRG1; pleiotropic regulator 1" }, { "name":"103395433 cwc15; spliceosome-associated protein CWC15 homolog\tK12863 CWC15; protein CWC15" }, { "name":"103384740 ctnnbl1; beta-catenin-like protein 1\tK12864 CTNNBL1; beta-catenin-like protein 1" }, { "name":"103378288 heat shock cognate 70 kDa protein-like\tK03283 HSPA1_6_8; heat shock 70kDa protein 1\/6\/8" }, { "name":"103388515 heat shock cognate 71 kDa protein-like\tK03283 HSPA1_6_8; heat shock 70kDa protein 1\/6\/8" }, { "name":"103393458 heat shock 70 kDa protein 1\tK03283 HSPA1_6_8; heat shock 70kDa protein 1\/6\/8" }, { "name":"103395051 LOW QUALITY PROTEIN: heat shock cognate 71 kDa protein\tK03283 HSPA1_6_8; heat shock 70kDa protein 1\/6\/8" }, { "name":"103395053 heat shock cognate 70 kDa protein\tK03283 HSPA1_6_8; heat shock 70kDa protein 1\/6\/8" }, { "name":"103385388 pqbp1; polyglutamine-binding protein 1\tK12865 PQBP1; polyglutamine-binding protein 1" }, { "name":"103393390 wbp11; LOW QUALITY PROTEIN: WW domain-binding protein 11\tK12866 WBP11; WW domain-binding protein 11" } ] }, { "name":"Prp19-related factors", "children":[ { "name":"103380701 snw1; SNW domain-containing protein 1 isoform X1\tK06063 SNW1; SNW domain-containing protein 1" }, { "name":"103392861 xab2; pre-mRNA-splicing factor SYF1\tK12867 SYF1; pre-mRNA-splicing factor SYF1" }, { "name":"103382054 syf2; pre-mRNA-splicing factor SYF2\tK12868 SYF2; pre-mRNA-splicing factor SYF2" }, { "name":"103381317 crnkl1; crooked neck-like protein 1\tK12869 CRN; crooked neck" }, { "name":"103379690 aqr; intron-binding protein aquarius isoform X1\tK12874 AQR; intron-binding protein aquarius" }, { "name":"103393336 bud31; protein BUD31 homolog\tK12873 BUD31; bud site selection protein 31" }, { "name":"103388380 ccdc12; coiled-coil domain-containing protein 12\tK12871 CCDC12; coiled-coil domain-containing protein 12" }, { "name":"103386836 pre-mRNA-splicing factor ISY1 homolog\tK12870 ISY1; pre-mRNA-splicing factor ISY1" }, { "name":"103399576 pre-mRNA-splicing factor ISY1 homolog\tK12870 ISY1; pre-mRNA-splicing factor ISY1" }, { "name":"103382353 ppie; peptidyl-prolyl cis-trans isomerase E\tK09564 PPIE; peptidyl-prolyl isomerase E (cyclophilin E) [EC:5.2.1.8]" }, { "name":"103385759 ppil1; peptidyl-prolyl cis-trans isomerase-like 1\tK12733 PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 [EC:5.2.1.8]" }, { "name":"103394553 prcc; proline-rich protein PRCC\tK13105 PRCC; proline-rich protein PRCC" }, { "name":"103390996 rbm22; pre-mRNA-splicing factor RBM22\tK12872 RBM22; pre-mRNA-splicing factor RBM22\/SLT11" }, { "name":"103379057 UPF0469 protein KIAA0907 homolog\tK25780 KHDC4; kelch domain-containing protein 4" }, { "name":"103388273 UPF0469 protein KIAA0907 homolog\tK25780 KHDC4; kelch domain-containing protein 4" } ] }, { "name":"RES complex", "children":[ { "name":"103395158 bud13; BUD13 homolog\tK13106 BUD13; pre-mRNA-splicing factor CWC26" }, { "name":"103395634 rbmx2; RNA-binding motif protein, X-linked 2\tK13107 RBMX2; RNA-binding motif protein, X-linked 2" }, { "name":"103387906 snip1; smad nuclear-interacting protein 1\tK13108 SNIP1; smad nuclear-interacting protein 1" } ] }, { "name":"Complex B specific factors", "children":[ { "name":"103395595 ik; protein Red isoform X2\tK13109 IK; IK cytokine" }, { "name":"103398466 mfap1; microfibrillar-associated protein 1\tK13110 MFAP1; pre-mRNA-splicing factor MFAP1\/SPP381" }, { "name":"103383832 smu1; WD40 repeat-containing protein SMU1 isoform X1\tK13111 SMU1; WD40 repeat-containing protein SMU1" }, { "name":"103391057 WD40 repeat-containing protein SMU1\tK13111 SMU1; WD40 repeat-containing protein SMU1" }, { "name":"103388009 thyroid hormone receptor-associated protein 3-like\tK13112 THRAP3; thyroid hormone receptor-associated protein 3" }, { "name":"103394021 thrap3; LOW QUALITY PROTEIN: thyroid hormone receptor-associated protein 3\tK13112 THRAP3; thyroid hormone receptor-associated protein 3" }, { "name":"103383496 ubl5; ubiquitin-like protein 5\tK13113 UBL5; ubiquitin-like protein 5" } ] } ] } ] }, { "name":"Complex C", "children":[ { "name":"U2 snRNP components", "children":[ { "name":"Sm proteins", "children":[ { "name":"103386822 snrpb; small nuclear ribonucleoprotein-associated proteins B and B'\tK11086 SNRPB; small nuclear ribonucleoprotein B and B'" }, { "name":"103394437 snrpd1; small nuclear ribonucleoprotein Sm D1\tK11087 SNRPD1; small nuclear ribonucleoprotein D1" }, { "name":"103377623 snrpd2; small nuclear ribonucleoprotein Sm D2\tK11096 SNRPD2; small nuclear ribonucleoprotein D2" }, { "name":"103389391 snrpd3; small nuclear ribonucleoprotein Sm D3\tK11088 SNRPD3; small nuclear ribonucleoprotein D3" }, { "name":"103386294 snrpe; small nuclear ribonucleoprotein E\tK11097 SNRPE; small nuclear ribonucleoprotein E" }, { "name":"103382608 snrpf; small nuclear ribonucleoprotein F\tK11098 SNRPF; small nuclear ribonucleoprotein F" }, { "name":"103384709 snrpg; small nuclear ribonucleoprotein G\tK11099 SNRPG; small nuclear ribonucleoprotein G" } ] }, { "name":"LSm proteins", "children":[ { "name":"103399951 lsm2; U6 snRNA-associated Sm-like protein LSm2\tK12621 LSM2; U6 snRNA-associated Sm-like protein LSm2" }, { "name":"103386519 lsm3; U6 snRNA-associated Sm-like protein LSm3\tK12622 LSM3; U6 snRNA-associated Sm-like protein LSm3" } ] }, { "name":"U2 SnRNP specific factors", "children":[ { "name":"103379037 U2 small nuclear ribonucleoprotein A'-like\tK11092 SNRPA1; U2 small nuclear ribonucleoprotein A'" }, { "name":"103383391 snrpb2; U2 small nuclear ribonucleoprotein B''\tK11094 SNRPB2; U2 small nuclear ribonucleoprotein B''" }, { "name":"103396919 splicing factor 3A subunit 1-like\tK12825 SF3A1; splicing factor 3A subunit 1" }, { "name":"103398042 sf3a1; splicing factor 3A subunit 1\tK12825 SF3A1; splicing factor 3A subunit 1" }, { "name":"103395945 sf3a2; splicing factor 3A subunit 2\tK12826 SF3A2; splicing factor 3A subunit 2" }, { "name":"103394705 sf3a3; splicing factor 3A subunit 3\tK12827 SF3A3; splicing factor 3A subunit 3" }, { "name":"103391643 sf3b1; splicing factor 3B subunit 1 isoform X1\tK12828 SF3B1; splicing factor 3B subunit 1" }, { "name":"103386046 sf3b2; LOW QUALITY PROTEIN: splicing factor 3B subunit 2\tK12829 SF3B2; splicing factor 3B subunit 2" }, { "name":"103379502 sf3b3; splicing factor 3B subunit 3\tK12830 SF3B3; splicing factor 3B subunit 3" }, { "name":"103394266 sf3b4; splicing factor 3B subunit 4\tK12831 SF3B4; splicing factor 3B subunit 4" }, { "name":"103387080 sf3b5; splicing factor 3B subunit 5\tK12832 SF3B5; splicing factor 3B subunit 5" }, { "name":"103380723 sf3b6; splicing factor 3B subunit 6\tK12833 SF3B14; pre-mRNA branch site protein p14" }, { "name":"103392660 ddx42; ATP-dependent RNA helicase DDX42 isoform X2\tK12835 DDX42; ATP-dependent RNA helicase DDX42 [EC:5.6.2.7]" }, { "name":"103382150 phf5a; PHD finger-like domain-containing protein 5A\tK12834 PHF5A; PHD finger-like domain-containing protein 5A" } ] } ] }, { "name":"U4\/U6.U5 tri-snRNP components", "children":[ { "name":"Sm proteins", "children":[ { "name":"103386822 snrpb; small nuclear ribonucleoprotein-associated proteins B and B'\tK11086 SNRPB; small nuclear ribonucleoprotein B and B'" }, { "name":"103394437 snrpd1; small nuclear ribonucleoprotein Sm D1\tK11087 SNRPD1; small nuclear ribonucleoprotein D1" }, { "name":"103377623 snrpd2; small nuclear ribonucleoprotein Sm D2\tK11096 SNRPD2; small nuclear ribonucleoprotein D2" }, { "name":"103389391 snrpd3; small nuclear ribonucleoprotein Sm D3\tK11088 SNRPD3; small nuclear ribonucleoprotein D3" }, { "name":"103386294 snrpe; small nuclear ribonucleoprotein E\tK11097 SNRPE; small nuclear ribonucleoprotein E" }, { "name":"103382608 snrpf; small nuclear ribonucleoprotein F\tK11098 SNRPF; small nuclear ribonucleoprotein F" }, { "name":"103384709 snrpg; small nuclear ribonucleoprotein G\tK11099 SNRPG; small nuclear ribonucleoprotein G" } ] }, { "name":"U5 SnRNP specific factors", "children":[ { "name":"103393137 eftud2; 116 kDa U5 small nuclear ribonucleoprotein component\tK12852 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component" }, { "name":"103397587 snrnp200; U5 small nuclear ribonucleoprotein 200 kDa helicase isoform X1\tK12854 SNRNP200; pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]" }, { "name":"103384434 prpf6; LOW QUALITY PROTEIN: pre-mRNA-processing factor 6\tK12855 PRPF6; pre-mRNA-processing factor 6" }, { "name":"103378069 prpf8; pre-mRNA-processing-splicing factor 8\tK12856 PRPF8; pre-mRNA-processing factor 8" }, { "name":"103394346 snrnp40; U5 small nuclear ribonucleoprotein 40 kDa protein\tK12857 SNRNP40; Prp8 binding protein" }, { "name":"103385412 ddx23; probable ATP-dependent RNA helicase DDX23 isoform X1\tK12858 DDX23; ATP-dependent RNA helicase DDX23\/PRP28 [EC:5.6.2.7]" } ] }, { "name":"U4\/U6.U5 tri-SnRNP related factors", "children":[ { "name":"103391823 cwc22; pre-mRNA-splicing factor CWC22 homolog\tK13100 CWC22; pre-mRNA-splicing factor CWC22" }, { "name":"103390251 skiv2l2; superkiller viralicidic activity 2-like 2\tK12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]" }, { "name":"103383656 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15\tK12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15\/PRP43 [EC:5.6.2.6]" }, { "name":"103390531 dhx15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1\tK12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15\/PRP43 [EC:5.6.2.6]" }, { "name":"103390125 heat shock protein beta-1-like\tK04455 HSPB1; heat shock protein beta-1" }, { "name":"103395180 hspb1; heat shock protein beta-1\tK04455 HSPB1; heat shock protein beta-1" }, { "name":"103397724 ppil2; peptidyl-prolyl cis-trans isomerase-like 2\tK10598 PPIL2; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]" }, { "name":"103396309 znf830; zinc finger protein 830\tK13104 ZNF830; zinc finger protein 830" }, { "name":"103398195 tfip11; tuftelin-interacting protein 11\tK13103 TFIP11; tuftelin-interacting protein 11" }, { "name":"103394595 rp9; retinitis pigmentosa 9 protein\tK19604 RP9; retinitis pigmentosa 9 protein" } ] } ] }, { "name":"Other components", "children":[ { "name":"Prp19-CDC5 complex", "children":[ { "name":"103390974 prpf19; pre-mRNA-processing factor 19\tK10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]" }, { "name":"103387747 cdc5l; cell division cycle 5-like protein\tK12860 CDC5L; pre-mRNA-splicing factor CDC5\/CEF1" }, { "name":"103384908 bcas2; pre-mRNA-splicing factor SPF27\tK12861 BCAS2; pre-mRNA-splicing factor SPF27" }, { "name":"103384740 ctnnbl1; beta-catenin-like protein 1\tK12864 CTNNBL1; beta-catenin-like protein 1" }, { "name":"103395433 cwc15; spliceosome-associated protein CWC15 homolog\tK12863 CWC15; protein CWC15" }, { "name":"103383609 plrg1; pleiotropic regulator 1\tK12862 PLRG1; pleiotropic regulator 1" }, { "name":"103378288 heat shock cognate 70 kDa protein-like\tK03283 HSPA1_6_8; heat shock 70kDa protein 1\/6\/8" }, { "name":"103388515 heat shock cognate 71 kDa protein-like\tK03283 HSPA1_6_8; heat shock 70kDa protein 1\/6\/8" }, { "name":"103393458 heat shock 70 kDa protein 1\tK03283 HSPA1_6_8; heat shock 70kDa protein 1\/6\/8" }, { "name":"103395051 LOW QUALITY PROTEIN: heat shock cognate 71 kDa protein\tK03283 HSPA1_6_8; heat shock 70kDa protein 1\/6\/8" }, { "name":"103395053 heat shock cognate 70 kDa protein\tK03283 HSPA1_6_8; heat shock 70kDa protein 1\/6\/8" } ] }, { "name":"Prp19-related factors", "children":[ { "name":"103380701 snw1; SNW domain-containing protein 1 isoform X1\tK06063 SNW1; SNW domain-containing protein 1" }, { "name":"103392861 xab2; pre-mRNA-splicing factor SYF1\tK12867 SYF1; pre-mRNA-splicing factor SYF1" }, { "name":"103382054 syf2; pre-mRNA-splicing factor SYF2\tK12868 SYF2; pre-mRNA-splicing factor SYF2" }, { "name":"103381317 crnkl1; crooked neck-like protein 1\tK12869 CRN; crooked neck" }, { "name":"103379690 aqr; intron-binding protein aquarius isoform X1\tK12874 AQR; intron-binding protein aquarius" }, { "name":"103393336 bud31; protein BUD31 homolog\tK12873 BUD31; bud site selection protein 31" }, { "name":"103388380 ccdc12; coiled-coil domain-containing protein 12\tK12871 CCDC12; coiled-coil domain-containing protein 12" }, { "name":"103386836 pre-mRNA-splicing factor ISY1 homolog\tK12870 ISY1; pre-mRNA-splicing factor ISY1" }, { "name":"103399576 pre-mRNA-splicing factor ISY1 homolog\tK12870 ISY1; pre-mRNA-splicing factor ISY1" }, { "name":"103385759 ppil1; peptidyl-prolyl cis-trans isomerase-like 1\tK12733 PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 [EC:5.2.1.8]" }, { "name":"103382353 ppie; peptidyl-prolyl cis-trans isomerase E\tK09564 PPIE; peptidyl-prolyl isomerase E (cyclophilin E) [EC:5.2.1.8]" }, { "name":"103390996 rbm22; pre-mRNA-splicing factor RBM22\tK12872 RBM22; pre-mRNA-splicing factor RBM22\/SLT11" } ] }, { "name":"RES complex", "children":[ { "name":"103395158 bud13; BUD13 homolog\tK13106 BUD13; pre-mRNA-splicing factor CWC26" }, { "name":"103395634 rbmx2; RNA-binding motif protein, X-linked 2\tK13107 RBMX2; RNA-binding motif protein, X-linked 2" }, { "name":"103387906 snip1; smad nuclear-interacting protein 1\tK13108 SNIP1; smad nuclear-interacting protein 1" } ] }, { "name":"EJC\/TREX", "children":[ { "name":"103388267 apoptotic chromatin condensation inducer in the nucleus-like isoform X1\tK12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus" }, { "name":"103388655 apoptotic chromatin condensation inducer in the nucleus-like\tK12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus" }, { "name":"103396595 acin1; apoptotic chromatin condensation inducer in the nucleus isoform X1\tK12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus" }, { "name":"103383295 eif4a3; eukaryotic initiation factor 4A-III\tK13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]" }, { "name":"103385938 ccdc174; coiled-coil domain-containing protein 174\tK25178 CCDC174; coiled-coil domain-containing protein 174" }, { "name":"103398745 magoh; protein mago nashi homolog\tK12877 MAGOH; protein mago nashi" }, { "name":"103383591 pnn; pinin\tK13114 PNN; pinin" }, { "name":"103388815 rbm8a; RNA-binding protein 8A isoform X1\tK12876 RBM8A; RNA-binding protein 8A" }, { "name":"103396391 thoc1; THO complex subunit 1\tK12878 THOC1; THO complex subunit 1" }, { "name":"103395544 thoc2; THO complex subunit 2\tK12879 THOC2; THO complex subunit 2" }, { "name":"103391087 thoc3; THO complex subunit 3\tK12880 THOC3; THO complex subunit 3" }, { "name":"103384291 alyref; THO complex subunit 4 isoform X1\tK12881 THOC4; THO complex subunit 4" }, { "name":"103393202 THO complex subunit 4-like\tK12881 THOC4; THO complex subunit 4" } ] }, { "name":"Step II factors", "children":[ { "name":"103380862 cdc40; pre-mRNA-processing factor 17\tK12816 CDC40; pre-mRNA-processing factor 17" }, { "name":"103380125 prpf18; pre-mRNA-splicing factor 18 isoform X1\tK12817 PRPF18; pre-mRNA-splicing factor 18" }, { "name":"103391205 slu7; pre-mRNA-splicing factor SLU7\tK12819 SLU7; pre-mRNA-processing factor SLU7" }, { "name":"103381856 ATP-dependent RNA helicase DHX8 isoform X1\tK12818 DHX8; ATP-dependent RNA helicase DHX8\/PRP22 [EC:5.6.2.6]" }, { "name":"103381857 ATP-dependent RNA helicase DHX8-like isoform X2\tK12818 DHX8; ATP-dependent RNA helicase DHX8\/PRP22 [EC:5.6.2.6]" }, { "name":"103398425 dhx38; pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1\tK12815 DHX38; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38\/PRP16 [EC:5.6.2.6]" }, { "name":"103378495 rsrc1; serine\/Arginine-related protein 53 isoform X1\tK24594 RSRC1; arginine\/serine-rich coiled-coil protein 1" } ] }, { "name":"PPlases", "children":[ { "name":"103397834 ppil3; peptidyl-prolyl cis-trans isomerase-like 3\tK12734 PPIL3; peptidyl-prolyl cis-trans isomerase-like 3 [EC:5.2.1.8]" }, { "name":"103380598 ppil4; peptidyl-prolyl cis-trans isomerase-like 4\tK12735 PPIL4; peptidyl-prolyl cis-trans isomerase-like 4 [EC:5.2.1.8]" }, { "name":"103392218 ppig; peptidyl-prolyl cis-trans isomerase G\tK09566 PPIG; peptidyl-prolyl isomerase G (cyclophilin G) [EC:5.2.1.8]" }, { "name":"103389909 ppwd1; peptidylprolyl isomerase domain and WD repeat-containing protein 1\tK12736 PPWD1; peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:5.2.1.8]" }, { "name":"103389910 cwc27; peptidyl-prolyl cis-trans isomerase CWC27 homolog isoform X1\tK12737 SDCCAG10; peptidyl-prolyl cis-trans isomerase SDCCAG10 [EC:5.2.1.8]" } ] }, { "name":"hnRNP proteins", "children":[ { "name":"103379137 hnrnph3; heterogeneous nuclear ribonucleoprotein H3 isoform X1\tK12898 HNRNPF_H; heterogeneous nuclear ribonucleoprotein F\/H" }, { "name":"103391238 hnrnph1; heterogeneous nuclear ribonucleoprotein H isoform X1\tK12898 HNRNPF_H; heterogeneous nuclear ribonucleoprotein F\/H" }, { "name":"103398955 G-rich sequence factor 1-like\tK12898 HNRNPF_H; heterogeneous nuclear ribonucleoprotein F\/H" }, { "name":"103394583 hnrnpr; heterogeneous nuclear ribonucleoprotein R isoform X1\tK13161 HNRNPR; heterogeneous nuclear ribonucleoprotein R" } ] }, { "name":"Complex C specific factors", "children":[ { "name":"103383184 ccdc130; coiled-coil domain-containing protein 130\tK13115 CCDC130; coiled-coil domain-containing protein 130" }, { "name":"103391105 ddx41; LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX41\tK13116 DDX41; ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]" }, { "name":"103385458 dhx35; probable ATP-dependent RNA helicase DHX35\tK13117 DHX35; ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]" }, { "name":"103390111 dgcr14; protein DGCR14\tK13118 DGCR14; protein DGCR14" }, { "name":"103384575 fam50a; protein FAM50A\tK13119 FAM50; protein FAM50" }, { "name":"103397126 fam32a; protein FAM32A\tK13120 FAM32A; protein FAM32A" }, { "name":"103381424 protein FRA10AC1 isoform X1\tK13121 FRA10AC1; protein FRA10AC1" }, { "name":"103384333 frg1; protein FRG1\tK13122 FRG1; protein FRG1" }, { "name":"103378587 gpatch1; G patch domain-containing protein 1 isoform X2\tK13123 GPATCH1; G patch domain-containing protein 1" }, { "name":"103383186 wdr83; WD repeat domain-containing protein 83\tK13124 MORG1; mitogen-activated protein kinase organizer 1" }, { "name":"103393499 nosip; nitric oxide synthase-interacting protein\tK13125 NOSIP; nitric oxide synthase-interacting protein" }, { "name":"103383161 pabpc4; polyadenylate-binding protein 4\tK13126 PABPC; polyadenylate-binding protein" }, { "name":"103385488 embryonic polyadenylate-binding protein-like\tK13126 PABPC; polyadenylate-binding protein" }, { "name":"103388904 pabpc1; polyadenylate-binding protein 1\tK13126 PABPC; polyadenylate-binding protein" }, { "name":"103394269 polyadenylate-binding protein 1-like\tK13126 PABPC; polyadenylate-binding protein" }, { "name":"103392659 rnf113a; RING finger protein 113A\tK13127 RNF113A; RING finger protein 113A" }, { "name":"103398195 tfip11; tuftelin-interacting protein 11\tK13103 TFIP11; tuftelin-interacting protein 11" }, { "name":"103397511 zcchc8; zinc finger CCHC domain-containing protein 8 isoform X1\tK13128 ZCCHC8; zinc finger CCHC domain-containing protein 8" }, { "name":"103395928 cactin; cactin\tK25058 CACTIN; cactin" }, { "name":"103383276 sde2; protein SDE2 homolog\tK25059 SDE2; replication stress response regulator SDE2" }, { "name":"103380729 prkrip1; PRKR-interacting protein 1\tK26159 PRKRIP1; PRKR-interacting protein 1" }, { "name":"103398245 czh9orf78; uncharacterized protein C9orf78 homolog\tK28609 C9ORF78; splicing factor C9orf78" }, { "name":"103387853 leng1; leukocyte receptor cluster member 1\tK28610 LENG1; leukocyte receptor cluster member 1" } ] } ] } ] }, { "name":"Other splicing related proteins", "children":[ { "name":"Proteins involved in snRNP biogenesis", "children":[ { "name":"SMN complex factors", "children":[ { "name":"103398254 survival motor neuron protein 1-like isoform X2\tK13129 SMN; survival motor neuron protein" }, { "name":"103398418 survival of motor neuron protein-like\tK13129 SMN; survival motor neuron protein" }, { "name":"103383583 gemin2; gem-associated protein 2\tK13130 GEMIN2; gem associated protein 2" }, { "name":"103377785 gemin4; gem-associated protein 4\tK13132 GEMIN4; gem associated protein 4" }, { "name":"103395737 gemin5; gem-associated protein 5\tK13133 GEMIN5; gem associated protein 5" }, { "name":"103383304 gemin6; gem-associated protein 6\tK13134 GEMIN6; gem associated protein 6" }, { "name":"103378058 gemin7; gem-associated protein 7\tK13135 GEMIN7; gem associated protein 7" }, { "name":"103389536 gemin8; gem-associated protein 8 isoform X1\tK13136 GEMIN8; gem associated protein 8" }, { "name":"103383022 strap; serine-threonine kinase receptor-associated protein\tK13137 STRAP; serine-threonine kinase receptor-associated protein" } ] }, { "name":"Integrator complex", "children":[ { "name":"103392627 ints1; integrator complex subunit 1 isoform X2\tK13138 INTS1; integrator complex subunit 1" }, { "name":"103395205 ints2; integrator complex subunit 2\tK13139 INTS2; integrator complex subunit 2" }, { "name":"103393747 ints3; integrator complex subunit 3\tK13140 INTS3; integrator complex subunit 3 (SOSS complex subunit A)" }, { "name":"103378299 ints4; integrator complex subunit 4 isoform X1\tK13141 INTS4; integrator complex subunit 4" }, { "name":"103390814 ints5; integrator complex subunit 5 isoform X1\tK13142 INTS5; integrator complex subunit 5" }, { "name":"103391278 ints6l; protein DDX26B isoform X1\tK13143 INTS6; integrator complex subunit 6" }, { "name":"103391913 ints6; integrator complex subunit 6\tK13143 INTS6; integrator complex subunit 6" }, { "name":"103380900 ints7; integrator complex subunit 7\tK13144 INTS7; integrator complex subunit 7" }, { "name":"103393924 ints8; integrator complex subunit 8\tK13145 INTS8; integrator complex subunit 8" }, { "name":"103380726 ints9; integrator complex subunit 9 isoform X1\tK13146 INTS9; integrator complex subunit 9" }, { "name":"103390966 ints10; integrator complex subunit 10 isoform X2\tK13147 INTS10; integrator complex subunit 10" }, { "name":"103385284 cpsf3l; integrator complex subunit 11\tK13148 CPSF3L; integrator complex subunit 11 [EC:3.1.27.-]" }, { "name":"103383525 ints12; integrator complex subunit 12\tK13149 INTS12; integrator complex subunit 12" }, { "name":"103382824 asun; protein asunder homolog isoform X2\tK28447 INTS13; integrator complex subunit 13" }, { "name":"103380234 vwa9; von Willebrand factor A domain-containing protein 9\tK28448 INTS14; integrator complex subunit 14" }, { "name":"103396200 uncharacterized protein C7orf26-like\tK28449 INTS15; integrator complex subunit 15" } ] }, { "name":"Other proteins involved in snRNP biogenesis", "children":[ { "name":"103393615 coil; coilin\tK13150 COIL; coilin" }, { "name":"103387644 smndc1; survival of motor neuron-related-splicing factor 30\tK12839 SMNDC1; survival of motor neuron-related-splicing factor 30" }, { "name":"103380001 snupn; snurportin-1 isoform X1\tK13151 SNUPN; snurportin-1" }, { "name":"103379466 usb1; U6 snRNA phosphodiesterase isoform X1\tK23093 USB1; U6 snRNA phosphodiesterase [EC:3.1.4.-]" }, { "name":"103386867 thumpd2; THUMP domain-containing protein 2\tK28400 THUMPD2; U6 snRNA (guanine-N(2))-methyltransferase THUMPD2 [EC:2.1.1.-]" }, { "name":"103390829 trmt112; multifunctional methyltransferase subunit TRM112-like protein\tK15448 TRM112; multifunctional methyltransferase subunit TRM112" }, { "name":"103377947 clns1a; methylosome subunit pICln\tK05019 CLNS1A; chloride channel, nucleotide-sensitive, 1A" }, { "name":"103396651 tgs1; trimethylguanosine synthase\tK14292 TGS1; trimethylguanosine synthase [EC:2.1.1.-]" }, { "name":"103386648 zpr1; zinc finger protein ZPR1\tK06874 ZPR1; zinc finger protein ZPR1" } ] } ] }, { "name":"Minor spliceosome components", "children":[ { "name":"Minor spliceosome specific factors", "children":[ { "name":"103390130 zmat5; zinc finger matrin-type protein 5\tK13152 ZMAT5; U11\/U12 small nuclear ribonucleoprotein 20 kDa protein" }, { "name":"103392767 snrnp25; U11\/U12 small nuclear ribonucleoprotein 25 kDa protein\tK13153 SNRNP25; U11\/U12 small nuclear ribonucleoprotein 25 kDa protein" }, { "name":"103382839 zcrb1; zinc finger CCHC-type and RNA-binding motif-containing protein 1\tK13154 ZCRB1; U11\/U12 small nuclear ribonucleoprotein 31 kDa protein" }, { "name":"103395159 LOW QUALITY PROTEIN: U11\/U12 small nuclear ribonucleoprotein 35 kDa protein\tK13155 SNRNP35; U11\/U12 small nuclear ribonucleoprotein 35 kDa protein" }, { "name":"103388071 snrnp48; U11\/U12 small nuclear ribonucleoprotein 48 kDa protein\tK13156 SNRNP48; U11\/U12 small nuclear ribonucleoprotein 48 kDa protein" }, { "name":"103377081 rnpc3; LOW QUALITY PROTEIN: RNA-binding protein 40\tK13157 RNPC3; U11\/U12 small nuclear ribonucleoprotein 65 kDa protein" } ] }, { "name":"Minor spliceosome associated proteins", "children":[ { "name":"103394334 rbm48; RNA-binding protein 48\tK24824 RBM48; RNA-binding protein 48" }, { "name":"103381901 armc7; armadillo repeat-containing protein 7\tK24825 ARMC7; armadillo repeat-containing protein 7" }, { "name":"103381536 cript; cysteine-rich PDZ-binding protein\tK24826 CRIPT; cysteine-rich PDZ-binding protein" }, { "name":"103388702 scnm1; sodium channel modifier 1\tK24827 SCNM1; sodium channel modifier 1" }, { "name":"103397724 ppil2; peptidyl-prolyl cis-trans isomerase-like 2\tK10598 PPIL2; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]" }, { "name":"103397923 ccdc84; coiled-coil domain-containing protein 84\tK26160 CENATAC; centrosomal AT-AC splicing factor" } ] } ] }, { "name":"Spliceosome associated proteins (SAPs)", "children":[ { "name":"hnRNP proteins", "children":[ { "name":"103390629 heterogeneous nuclear ribonucleoprotein A0-like\tK12894 HNRNPA0; heterogeneous nuclear ribonucleoprotein A0" }, { "name":"103390630 heterogeneous nuclear ribonucleoprotein A0-like\tK12894 HNRNPA0; heterogeneous nuclear ribonucleoprotein A0" }, { "name":"103396423 heterogeneous nuclear ribonucleoprotein A0-like\tK12894 HNRNPA0; heterogeneous nuclear ribonucleoprotein A0" }, { "name":"103389920 hnrnpd; heterogeneous nuclear ribonucleoprotein D0 isoform X1\tK13044 HNRNPABD; heterogeneous nuclear ribonucleoprotein A\/B\/D" }, { "name":"103391015 heterogeneous nuclear ribonucleoprotein A\/B-like\tK13044 HNRNPABD; heterogeneous nuclear ribonucleoprotein A\/B\/D" }, { "name":"103395151 heterogeneous nuclear ribonucleoprotein A\/B-like\tK13044 HNRNPABD; heterogeneous nuclear ribonucleoprotein A\/B\/D" }, { "name":"103377921 hnrnpl; heterogeneous nuclear ribonucleoprotein L\tK13159 HNRNPL; heterogeneous nuclear ribonucleoprotein L" }, { "name":"103383368 heterogeneous nuclear ribonucleoprotein L-like\tK13159 HNRNPL; heterogeneous nuclear ribonucleoprotein L" }, { "name":"103386960 hnrnpll; heterogeneous nuclear ribonucleoprotein L-like\tK13159 HNRNPL; heterogeneous nuclear ribonucleoprotein L" }, { "name":"103394992 heterogeneous nuclear ribonucleoprotein L-like\tK13159 HNRNPL; heterogeneous nuclear ribonucleoprotein L" }, { "name":"103378063 heterogeneous nuclear ribonucleoprotein Q isoform X4\tK13160 SYNCRIP; heterogeneous nuclear ribonucleoprotein Q" }, { "name":"103381342 syncrip; heterogeneous nuclear ribonucleoprotein Q isoform X2\tK13160 SYNCRIP; heterogeneous nuclear ribonucleoprotein Q" }, { "name":"103377853 hnrnpul1; LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein U-like protein 1\tK15047 HNRNPUL1; heterogeneous nuclear ribonucleoprotein U-like protein 1" }, { "name":"103385578 LOW QUALITY PROTEIN: poly(rC)-binding protein 2-like\tK13162 PCBP2; poly(rC)-binding protein 2" }, { "name":"103386382 poly(rC)-binding protein 2-like isoform X1\tK13162 PCBP2; poly(rC)-binding protein 2" }, { "name":"103381888 msl1; male-specific lethal 1 homolog isoform X1\tK13163 MSL1; male-specific lethal 1" }, { "name":"103377510 E3 ubiquitin-protein ligase MSL2-like\tK13164 MSL2; male-specific lethal 2" }, { "name":"103379024 E3 ubiquitin-protein ligase MSL2-like\tK13164 MSL2; male-specific lethal 2" } ] }, { "name":"SR proteins", "children":[ { "name":"103392447 srsf11; serine\/arginine-rich splicing factor 11 isoform X2\tK12899 SRSF11; serine\/arginine-rich splicing factor 11" }, { "name":"103396307 serine\/arginine-rich splicing factor 11-like\tK12899 SRSF11; serine\/arginine-rich splicing factor 11" }, { "name":"103390042 srek1; splicing regulatory glutamine\/lysine-rich protein 1 isoform X1\tK13165 SREK1; splicing regulatory glutamine\/lysine-rich protein 1" }, { "name":"103378217 splicing factor, arginine\/serine-rich 15-like\tK13167 SCAF4; SR-related and CTD-associated factor 4" }, { "name":"103395508 scaf4; splicing factor, arginine\/serine-rich 15 isoform X2\tK13167 SCAF4; SR-related and CTD-associated factor 4" }, { "name":"103378449 clasrp; CLK4-associating serine\/arginine rich protein\tK13168 CLASRP; CLK4-associating serine\/arginine rich protein" }, { "name":"103392250 akap17a; LOW QUALITY PROTEIN: A-kinase anchor protein 17A\tK13169 AKAP17; A-kinase anchor protein 17" }, { "name":"103388581 pnisr; arginine\/serine-rich protein PNISR isoform X1\tK13170 PNISR; arginine\/serine-rich protein PNISR" } ] }, { "name":"SR-related proteins", "children":[ { "name":"103382296 srrm1; serine\/arginine repetitive matrix protein 1 isoform X2\tK13171 SRRM1; serine\/arginine repetitive matrix protein 1" }, { "name":"103392354 arglu1; arginine and glutamate-rich protein 1 isoform X1\tK13173 ARGLU1; arginine and glutamate-rich protein 1" }, { "name":"103389462 son; protein SON\tK23718 SON; protein SON" }, { "name":"103383860 lens epithelium-derived growth factor isoform X1\tK25057 PSIP1; PC4 and SFRS1-interacting protein" }, { "name":"103378668 immunoglobulin-like domain-containing receptor 1 isoform X1\tK25781 ILDR1; immunoglobulin-like domain-containing receptor 1" }, { "name":"103391680 immunoglobulin-like domain-containing receptor 1\tK25781 ILDR1; immunoglobulin-like domain-containing receptor 1" }, { "name":"103378667 immunoglobulin-like domain-containing receptor 2 isoform X1\tK25782 ILDR2; immunoglobulin-like domain-containing receptor 2" }, { "name":"103391723 ildr2; immunoglobulin-like domain-containing receptor 2 isoform X1\tK25782 ILDR2; immunoglobulin-like domain-containing receptor 2" }, { "name":"103392379 zranb2; zinc finger Ran-binding domain-containing protein 2 isoform X1\tK26076 ZRANB2; zinc finger Ran-binding domain-containing protein 2" } ] }, { "name":"TREX complex", "children":[ { "name":"103396391 thoc1; THO complex subunit 1\tK12878 THOC1; THO complex subunit 1" }, { "name":"103395544 thoc2; THO complex subunit 2\tK12879 THOC2; THO complex subunit 2" }, { "name":"103391087 thoc3; THO complex subunit 3\tK12880 THOC3; THO complex subunit 3" }, { "name":"103384291 alyref; THO complex subunit 4 isoform X1\tK12881 THOC4; THO complex subunit 4" }, { "name":"103393202 THO complex subunit 4-like\tK12881 THOC4; THO complex subunit 4" }, { "name":"103398197 thoc5; LOW QUALITY PROTEIN: THO complex subunit 5 homolog\tK13174 THOC5; THO complex subunit 5" }, { "name":"103393399 thoc6; THO complex subunit 6 homolog\tK13175 THOC6; THO complex subunit 6" }, { "name":"103386204 thoc7; THO complex subunit 7 homolog\tK13176 THOC7; THO complex subunit 7" } ] }, { "name":"RNA helicase-like proteins", "children":[ { "name":"103381072 ddx1; ATP-dependent RNA helicase DDX1\tK13177 DDX1; ATP-dependent RNA helicase DDX1 [EC:5.6.2.7]" }, { "name":"103389314 ATP-dependent RNA helicase DDX3X-like isoform X1\tK11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]" }, { "name":"103391525 ddx3x; ATP-dependent RNA helicase DDX3X isoform X1\tK11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]" }, { "name":"103384051 ddx17; probable ATP-dependent RNA helicase DDX17\tK13178 DDX17; ATP-dependent RNA helicase DDX17 [EC:5.6.2.7]" }, { "name":"103392346 ddx18; ATP-dependent RNA helicase DDX18 isoform X2\tK13179 DDX18; ATP-dependent RNA helicase DDX18\/HAS1 [EC:5.6.2.7]" }, { "name":"103386814 ddx27; probable ATP-dependent RNA helicase DDX27\tK13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]" }, { "name":"103383573 ddx39a; ATP-dependent RNA helicase DDX39A\tK13182 DDX39; ATP-dependent RNA helicase DDX39 [EC:5.6.2.7]" }, { "name":"103393677 ATP-dependent RNA helicase DDX39A\tK13182 DDX39; ATP-dependent RNA helicase DDX39 [EC:5.6.2.7]" }, { "name":"103386878 probable ATP-dependent RNA helicase DDX43\tK17043 DDX43; ATP-dependent RNA helicase DDX43 [EC:5.6.2.7]" }, { "name":"103398898 dhx9; LOW QUALITY PROTEIN: ATP-dependent RNA helicase A\tK13184 DHX9; ATP-dependent RNA\/DNA helicase DHX9 [EC:5.6.2.6 5.6.2.4]" }, { "name":"103396265 dhx30; putative ATP-dependent RNA helicase DHX30\tK13185 DHX30; ATP-dependent RNA helicase DHX30 [EC:5.6.2.6]" }, { "name":"103389148 ythdc2; probable ATP-dependent RNA helicase YTHDC2\tK20099 YTHDC2; ATP-dependent RNA helicase YTHDC2 [EC:5.6.2.6]" }, { "name":"103389198 dqx1; ATP-dependent RNA helicase DQX1\tK14433 DQX1; ATP-dependent helicase [EC:5.6.2.-]" } ] }, { "name":"RNA binding proteins (RBPs)", "children":[ { "name":"103391328 RNA-binding protein 4B-like\tK13187 RBM4; RNA-binding protein 4" }, { "name":"103391345 RNA-binding protein 4.1-like\tK13187 RBM4; RNA-binding protein 4" }, { "name":"103391577 RNA-binding protein 4.1-like\tK13187 RBM4; RNA-binding protein 4" }, { "name":"103391590 RNA-binding protein 4.1-like\tK13187 RBM4; RNA-binding protein 4" }, { "name":"103399552 RNA-binding protein 4.1-like\tK13187 RBM4; RNA-binding protein 4" }, { "name":"103377634 RNA-binding protein 7-like\tK13188 RBM7; RNA-binding protein 7" }, { "name":"103386455 rbm12; RNA-binding protein 12\tK24526 RBM12; RNA-binding protein 12" }, { "name":"103388385 RNA-binding protein 12B isoform X2\tK24526 RBM12; RNA-binding protein 12" }, { "name":"103386527 RNA-binding protein 4-like\tK13189 RBM14; RNA-binding protein 14" }, { "name":"103395516 RNA-binding protein 4\tK13189 RBM14; RNA-binding protein 14" }, { "name":"103384796 rbm15; putative RNA-binding protein 15\tK13190 RBM15; RNA-binding protein 15" }, { "name":"103385876 putative RNA-binding protein 15\tK13190 RBM15; RNA-binding protein 15" }, { "name":"103386485 rbm15b; putative RNA-binding protein 15B\tK13190 RBM15; RNA-binding protein 15" }, { "name":"103377141 scaf8; protein SCAF8\tK13191 RBM16; RNA-binding protein 16" }, { "name":"103389121 rbm18; probable RNA-binding protein 18 isoform X2\tK24527 RBM18; RNA-binding protein 18" }, { "name":"103386093 RNA-binding protein 38-like\tK25006 RBM24_38; RNA-binding protein 24\/38" }, { "name":"103388368 RNA-binding protein 24-like isoform X1\tK25006 RBM24_38; RNA-binding protein 24\/38" }, { "name":"103394427 rbm24; RNA-binding protein 24\tK25006 RBM24_38; RNA-binding protein 24\/38" }, { "name":"103398815 rbm26; RNA-binding protein 26 isoform X1\tK13192 RBM26; RNA-binding protein 26" }, { "name":"103394852 rbm27; RNA-binding protein 27 isoform X1\tK13193 RBM27; RNA-binding protein 27" }, { "name":"103387484 RNA-binding protein with multiple splicing-like isoform X1\tK25091 RBPMS; RNA-binding protein with multiple splicing" }, { "name":"103398430 RNA-binding protein with multiple splicing-like\tK25091 RBPMS; RNA-binding protein with multiple splicing" }, { "name":"103388211 adar; double-stranded RNA-specific adenosine deaminase\tK12968 ADAR; double-stranded RNA-specific adenosine deaminase [EC:3.5.4.37]" }, { "name":"103377046 adarb2; double-stranded RNA-specific editase B2 isoform X1\tK13194 ADARB; double stranded RNA-specific editase B [EC:3.5.-.-]" }, { "name":"103389615 double-stranded RNA-specific editase 1-like\tK13194 ADARB; double stranded RNA-specific editase B [EC:3.5.-.-]" }, { "name":"103392469 adarb1; double-stranded RNA-specific editase 1 isoform X2\tK13194 ADARB; double stranded RNA-specific editase B [EC:3.5.-.-]" }, { "name":"103388431 cbx3; chromobox protein homolog 3\tK11586 CBX3; chromobox protein 3" }, { "name":"103394257 chromobox protein homolog 3-like\tK11586 CBX3; chromobox protein 3" }, { "name":"103395949 cirbp; cold-inducible RNA-binding protein\tK13195 CIRBP; cold-inducible RNA-binding protein" }, { "name":"103390807 dpf2; zinc finger protein ubi-d4 isoform X2\tK13196 DPF2; zinc finger protein ubi-d4" }, { "name":"103393571 insulin-like growth factor 2 mRNA-binding protein 1 isoform X1\tK17391 IGF2BP1; insulin-like growth factor 2 mRNA-binding protein 1" }, { "name":"103394131 igf2bp3; insulin-like growth factor 2 mRNA-binding protein 3 isoform X1\tK13197 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3" }, { "name":"103390626 KH domain-containing, RNA-binding, signal transduction-associated protein 1\tK13198 KHDRBS1; KH domain-containing, RNA-binding, signal transduction-associated protein 1" }, { "name":"103394116 KH domain-containing, RNA-binding, signal transduction-associated protein 1-like isoform X1\tK13198 KHDRBS1; KH domain-containing, RNA-binding, signal transduction-associated protein 1" }, { "name":"103387263 khdrbs2; KH domain-containing, RNA-binding, signal transduction-associated protein 2\tK17843 KHDRBS2; KH domain-containing, RNA-binding, signal transduction-associated protein 2" }, { "name":"103394179 khdrbs3; KH domain-containing, RNA-binding, signal transduction-associated protein 3 isoform X1\tK14942 KHDRBS3; KH domain-containing, RNA-binding, signal transduction-associated protein 3" }, { "name":"103378106 muscleblind-like protein 1 isoform X1\tK14943 MBNL; muscleblind" }, { "name":"103389869 muscleblind-like protein 2a isoform X5\tK14943 MBNL; muscleblind" }, { "name":"103390845 muscleblind-like protein 3 isoform X4\tK14943 MBNL; muscleblind" }, { "name":"103391593 muscleblind-like protein 2a isoform X1\tK14943 MBNL; muscleblind" }, { "name":"103396000 muscleblind-like protein 1 isoform X1\tK14943 MBNL; muscleblind" }, { "name":"103377877 RNA-binding protein Nova-1-like isoform X1\tK14944 NOVA; RNA-binding protein Nova" }, { "name":"103394980 RNA-binding protein Nova-1-like isoform X1\tK14944 NOVA; RNA-binding protein Nova" }, { "name":"103378575 protein quaking-A isoform X2\tK14945 QKI; protein quaking" }, { "name":"103381788 protein quaking-B-like isoform X1\tK14945 QKI; protein quaking" }, { "name":"103381838 rbfox3; RNA binding protein fox-1 homolog 3 isoform X1\tK14946 RBFOX; RNA binding protein fox-1" }, { "name":"103383791 RNA binding protein fox-1 homolog 2-like isoform X1\tK14946 RBFOX; RNA binding protein fox-1" }, { "name":"103387849 RNA binding protein fox-1 homolog 1-like isoform X1\tK14946 RBFOX; RNA binding protein fox-1" }, { "name":"103392531 RNA binding protein fox-1 homolog 3-like isoform X1\tK14946 RBFOX; RNA binding protein fox-1" }, { "name":"103393382 RNA binding protein fox-1 homolog 2-like isoform X1\tK14946 RBFOX; RNA binding protein fox-1" }, { "name":"103393431 RNA binding protein fox-1 homolog 1 isoform X6\tK14946 RBFOX; RNA binding protein fox-1" }, { "name":"103376746 plasminogen activator inhibitor 1 RNA-binding protein-like isoform X2\tK13199 SERBP1; plasminogen activator inhibitor 1 RNA-binding protein" }, { "name":"103395807 plasminogen activator inhibitor 1 RNA-binding protein\tK13199 SERBP1; plasminogen activator inhibitor 1 RNA-binding protein" }, { "name":"103389072 strbp; spermatid perinuclear RNA-binding protein\tK13200 STRBP; spermatid perinuclear RNA-binding protein" }, { "name":"103398025 spermatid perinuclear RNA-binding protein-like\tK13200 STRBP; spermatid perinuclear RNA-binding protein" }, { "name":"103387454 tial1; nucleolysin TIAR\tK13201 TIA1; nucleolysin TIA-1\/TIAR" }, { "name":"103390060 nucleolysin TIA-1 isoform X1\tK13201 TIA1; nucleolysin TIA-1\/TIAR" }, { "name":"103397209 nucleolysin TIA-1-like isoform X1\tK13201 TIA1; nucleolysin TIA-1\/TIAR" }, { "name":"103397454 tia1; nucleolysin TIA-1\tK13201 TIA1; nucleolysin TIA-1\/TIAR" }, { "name":"103396681 toe1; target of EGR1 protein 1\tK13202 TOE1; target of EGR1 protein 1" }, { "name":"103393403 LOW QUALITY PROTEIN: zinc finger RNA-binding protein\tK13203 ZFR; zinc finger RNA-binding protein" }, { "name":"103397064 zinc finger RNA-binding protein-like isoform X1\tK13203 ZFR; zinc finger RNA-binding protein" }, { "name":"103397483 LOW QUALITY PROTEIN: zinc finger RNA-binding protein-like\tK13203 ZFR; zinc finger RNA-binding protein" }, { "name":"103396101 znf326; DBIRD complex subunit ZNF326\tK13204 ZNF326; zinc finger protein 326" }, { "name":"103390353 ythdc1; YTH domain-containing protein 1 isoform X1\tK20100 YTHDC1; YTH domain-containing protein 1" }, { "name":"103390557 nkap; NF-kappa-B-activating protein\tK25931 NKAP; NF-kappa-B-activating protein" } ] }, { "name":"Other SAPs", "children":[ { "name":"103385449 aar2; protein AAR2 homolog\tK13205 AAR2; A1 cistron-splicing factor AAR2" }, { "name":"103394998 nsrp1; nuclear speckle splicing regulatory protein 1\tK13206 CCDC55; coiled-coil domain-containing protein 55" }, { "name":"103391020 dual specificity protein kinase CLK4-like isoform X2\tK23561 CLK1_4; dual specificity protein kinase CLK1\/4 [EC:2.7.12.1]" }, { "name":"103395145 dual specificity protein kinase CLK4-like isoform X1\tK23561 CLK1_4; dual specificity protein kinase CLK1\/4 [EC:2.7.12.1]" }, { "name":"103388277 dual specificity protein kinase CLK2-like\tK08823 CLK2_3; dual specificity protein kinase CLK2\/3 [EC:2.7.12.1]" }, { "name":"103394582 LOW QUALITY PROTEIN: dual specificity protein kinase CLK2-like\tK08823 CLK2_3; dual specificity protein kinase CLK2\/3 [EC:2.7.12.1]" }, { "name":"103378983 celf6; CUGBP Elav-like family member 6 isoform X1\tK13207 CUGBP; CUG-BP- and ETR3-like factor" }, { "name":"103379022 celf1; CUGBP Elav-like family member 1 isoform X1\tK13207 CUGBP; CUG-BP- and ETR3-like factor" }, { "name":"103380547 CUGBP Elav-like family member 2 isoform X1\tK13207 CUGBP; CUG-BP- and ETR3-like factor" }, { "name":"103382440 CUGBP Elav-like family member 2\tK13207 CUGBP; CUG-BP- and ETR3-like factor" }, { "name":"103386241 celf4; CUGBP Elav-like family member 4 isoform X1\tK13207 CUGBP; CUG-BP- and ETR3-like factor" }, { "name":"103388282 CUGBP Elav-like family member 3 isoform X1\tK13207 CUGBP; CUG-BP- and ETR3-like factor" }, { "name":"103394576 CUGBP Elav-like family member 3 isoform X1\tK13207 CUGBP; CUG-BP- and ETR3-like factor" }, { "name":"103399925 celf5; CUGBP Elav-like family member 5 isoform X1\tK13207 CUGBP; CUG-BP- and ETR3-like factor" }, { "name":"103395557 dnajc6; putative tyrosine-protein phosphatase auxilin\tK09526 DNAJC6; DnaJ homolog subfamily C member 6" }, { "name":"103394581 dnajc8; dnaJ homolog subfamily C member 8\tK09528 DNAJC8; DnaJ homolog subfamily C member 8" }, { "name":"103377390 dnajc13; LOW QUALITY PROTEIN: dnaJ homolog subfamily C member 13\tK09533 DNAJC13; DnaJ homolog subfamily C member 13" }, { "name":"103390846 elavl2; ELAV-like protein 2 isoform X1\tK13208 ELAVL2_3_4; ELAV like protein 2\/3\/4" }, { "name":"103392585 elavl3; ELAV-like protein 3 isoform X1\tK13208 ELAVL2_3_4; ELAV like protein 2\/3\/4" }, { "name":"103397482 elavl4; ELAV-like protein 4 isoform X7\tK13208 ELAVL2_3_4; ELAV like protein 2\/3\/4" }, { "name":"103379359 esrp2; epithelial splicing regulatory protein 2 isoform X1\tK14947 ESRP1_2; epithelial splicing regulatory protein 1\/2" }, { "name":"103388155 esrp1; epithelial splicing regulatory protein 1 isoform X1\tK14947 ESRP1_2; epithelial splicing regulatory protein 1\/2" }, { "name":"103397238 RNA-binding protein EWS-like\tK13209 EWSR1; RNA-binding protein EWS" }, { "name":"103398620 ewsr1; RNA-binding protein EWS\tK13209 EWSR1; RNA-binding protein EWS" }, { "name":"103383923 khsrp; far upstream element-binding protein 2 isoform X1\tK13210 FUBP; far upstream element-binding protein" }, { "name":"103390222 fubp3; far upstream element-binding protein 3 isoform X1\tK13210 FUBP; far upstream element-binding protein" }, { "name":"103396695 fubp1; far upstream element-binding protein 1 isoform X1\tK13210 FUBP; far upstream element-binding protein" }, { "name":"103397975 far upstream element-binding protein 3-like isoform X1\tK13210 FUBP; far upstream element-binding protein" }, { "name":"103395099 paxbp1; PAX3- and PAX7-binding protein 1\tK13211 GCFC; GC-rich sequence DNA-binding factor" }, { "name":"103381739 luc7l; putative RNA-binding protein Luc7-like 1 isoform X1\tK13212 LUC7L; RNA-binding protein Luc7-like" }, { "name":"103383755 putative RNA-binding protein Luc7-like 2\tK13212 LUC7L; RNA-binding protein Luc7-like" }, { "name":"103392958 luc7l3; LOW QUALITY PROTEIN: luc7-like protein 3\tK13212 LUC7L; RNA-binding protein Luc7-like" }, { "name":"103391101 matrin-3-like isoform X1\tK13213 MATR3; matrin 3" }, { "name":"103398038 non-POU domain-containing octamer-binding protein-like\tK13214 NONO; non-POU domain-containing octamer-binding protein" }, { "name":"103389695 LOW QUALITY PROTEIN: paraspeckle component 1-like\tK24993 PSPC1; paraspeckle component 1" }, { "name":"103393897 splicing factor, proline- and glutamine-rich-like isoform X1\tK13219 SFPQ; splicing factor, proline- and glutamine-rich" }, { "name":"103382569 nuclear receptor-interacting protein 2-like\tK13215 NRIP2; nuclear receptor-interacting protein 2" }, { "name":"103378868 ppp1cb; serine\/threonine-protein phosphatase PP1-beta catalytic subunit\tK06269 PPP1C; serine\/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]" }, { "name":"103381242 serine\/threonine-protein phosphatase PP1-beta catalytic subunit-like\tK06269 PPP1C; serine\/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]" }, { "name":"103381595 serine\/threonine-protein phosphatase alpha-2 isoform-like\tK06269 PPP1C; serine\/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]" }, { "name":"103385808 serine\/threonine-protein phosphatase PP1-beta catalytic subunit-like\tK06269 PPP1C; serine\/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]" }, { "name":"103392690 serine\/threonine-protein phosphatase alpha-2 isoform-like\tK06269 PPP1C; serine\/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]" }, { "name":"103397038 serine\/threonine-protein phosphatase PP1-gamma catalytic subunit-like isoform X1\tK06269 PPP1C; serine\/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]" }, { "name":"103397434 ppp1cc; serine\/threonine-protein phosphatase PP1-gamma catalytic subunit\tK06269 PPP1C; serine\/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]" }, { "name":"103387898 ppp1r8; nuclear inhibitor of protein phosphatase 1\tK13216 PPP1R8; nuclear inhibitor of protein phosphatase 1 [EC:3.1.4.-]" }, { "name":"103396603 prmt5; protein arginine N-methyltransferase 5\tK02516 PRMT5; type II protein arginine methyltransferase [EC:2.1.1.320]" }, { "name":"103377384 prpf4b; LOW QUALITY PROTEIN: serine\/threonine-protein kinase PRP4 homolog\tK08827 PRPF4B; serine\/threonine-protein kinase PRP4 [EC:2.7.11.1]" }, { "name":"103380999 prpf39; pre-mRNA-processing factor 39 isoform X2\tK13217 PRPF39; pre-mRNA-processing factor 39" }, { "name":"103390811 pre-mRNA-processing factor 39-like\tK13217 PRPF39; pre-mRNA-processing factor 39" }, { "name":"103392582 raver1; ribonucleoprotein PTB-binding 1\tK24999 RAVER1; ribonucleoprotein PTB-binding 1" }, { "name":"103379818 ptbp1; polypyrimidine tract-binding protein 1 isoform X1\tK13218 PTBP1; polypyrimidine tract-binding protein 1" }, { "name":"103376868 ptbp2; polypyrimidine tract-binding protein 2 isoform X1\tK14948 PTBP2; polypyrimidine tract-binding protein 2" }, { "name":"103396554 polypyrimidine tract-binding protein 2-like\tK14948 PTBP2; polypyrimidine tract-binding protein 2" }, { "name":"103390366 ptbp3; LOW QUALITY PROTEIN: polypyrimidine tract-binding protein 3\tK17844 PTBP3; polypyrimidine tract-binding protein 3" }, { "name":"103384603 srpk1; SRSF protein kinase 1 isoform X1\tK15409 SRPK1; serine\/threonine-protein kinase SRPK1 [EC:2.7.11.1]" }, { "name":"103386139 SRSF protein kinase 1-like isoform X6\tK15409 SRPK1; serine\/threonine-protein kinase SRPK1 [EC:2.7.11.1]" }, { "name":"103380327 SRSF protein kinase 2-like isoform X2\tK08831 SRPK2; serine\/threonine-protein kinase SRPK2 [EC:2.7.11.1]" }, { "name":"103382139 xrcc6; X-ray repair cross-complementing protein 6 isoform X1\tK10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1" }, { "name":"103389503 wbp4; WW domain-binding protein 4\tK13220 WBP4; WW domain-binding protein 4" }, { "name":"103385869 wdr77; methylosome protein 50\tK13221 WDR77; methylosome protein 50" }, { "name":"103377576 ccnl1; cyclin-L1 isoform X1\tK23966 CCNL; cyclin L" }, { "name":"103391562 dbr1; lariat debranching enzyme\tK18328 DBR1; lariat debranching enzyme [EC:3.1.-.-]" }, { "name":"103382533 cwf19l1; CWF19-like protein 1\tK24939 CWF19L1; CWF19-like protein 1" }, { "name":"103378520 cwf19l2; LOW QUALITY PROTEIN: CWF19-like protein 2\tK24940 CWF19L2; CWF19-like protein 2" }, { "name":"103397068 LOW QUALITY PROTEIN: scaffold attachment factor B2-like\tK25092 SAFB; scaffold attachment factor B" }, { "name":"103390156 armadillo repeat protein deleted in velo-cardio-facial syndrome homolog isoform X1\tK28154 ARVCF; splicing regulator ARVCF" }, { "name":"103398113 armadillo repeat protein deleted in velo-cardio-facial syndrome homolog\tK28154 ARVCF; splicing regulator ARVCF" }, { "name":"103384357 cwc25; pre-mRNA-splicing factor CWC25 homolog\tK28450 CWC25; pre-mRNA-splicing factor CWC25" }, { "name":"103379209 ccdc94; coiled-coil domain-containing protein 94\tK28527 YJU2; splicing factor YJU2" } ] } ] } ] }, { "name":"Splicing related RNAs" } ] }