{
	"name":"cux00001",
	"children":[
	{
		"name":"09100 Metabolism",
		"children":[
		{
			"name":"09101 Carbohydrate metabolism",
			"children":[
			{
				"name":"00010 Glycolysis \/ Gluconeogenesis [PATH:cux00010]",
				"children":[
				{
					"name":"CUP3940_0023 pgi; phosphoglucose isomerase\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]"
				},
				{
					"name":"CUP3940_0781 fbp; fructose-1,6-bisphosphatase I\tK03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]"
				},
				{
					"name":"CUP3940_0263 fbaA; fructose-bisphosphate aldolase, class IIA\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]"
				},
				{
					"name":"CUP3940_1519 tpiA; triosephosphate isomerase\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]"
				},
				{
					"name":"CUP3940_1517 gapA; glyceraldehyde 3-phosphate dehydrogenase A\tK00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]"
				},
				{
					"name":"CUP3940_1518 pgk; phosphoglycerate kinase\tK00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]"
				},
				{
					"name":"CUP3940_1021 pgm; phosphoglycerate mutase\tK15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]"
				},
				{
					"name":"CUP3940_1555 eno; enolase\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]"
				},
				{
					"name":"CUP3940_1036 pykF; pyruvate kinase I\tK00873 PK; pyruvate kinase [EC:2.7.1.40]"
				},
				{
					"name":"CUP3940_0100 por; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric\tK03737 por; pyruvate-ferredoxin\/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.8.1]"
				},
				{
					"name":"CUP3940_0793 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]"
				},
				{
					"name":"CUP3940_0794 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]"
				},
				{
					"name":"CUP3940_0110 zinc-dependent alcohol dehydrogenase\tK13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]"
				},
				{
					"name":"CUP3940_1272 acs; acetyl-CoA synthetase\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]"
				},
				{
					"name":"CUP3940_1514 phosphomannomutase \/ phosphoglucomutase\tK15778 pmm-pgm; phosphomannomutase \/ phosphoglucomutase [EC:5.4.2.8 5.4.2.2]"
				},
				{
					"name":"CUP3940_0519 pckA; phosphoenolpyruvate carboxykinase (ATP)\tK01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]"
				}
				]
			},
			{
				"name":"00020 Citrate cycle (TCA cycle) [PATH:cux00020]",
				"children":[
				{
					"name":"CUP3940_1562 gltA; citrate synthase\tK01647 CS; citrate synthase [EC:2.3.3.1]"
				},
				{
					"name":"CUP3940_0777 acnB; aconitate hydratase 2\tK01682 acnB; aconitate hydratase 2 \/ 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]"
				},
				{
					"name":"CUP3940_0788 icd; isocitrate dehydrogenase, monomeric\tK00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]"
				},
				{
					"name":"CUP3940_0793 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]"
				},
				{
					"name":"CUP3940_0794 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]"
				},
				{
					"name":"CUP3940_0795 oorC; 2-oxoglutarate:acceptor oxidoreductase, gamma subunit\tK00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]"
				},
				{
					"name":"CUP3940_0792 oorD; 2-oxoglutarate:acceptor oxidoreductase, delta subunit\tK00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]"
				},
				{
					"name":"CUP3940_0791 sucD; succinyl-CoA synthetase, alpha subunit\tK01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]"
				},
				{
					"name":"CUP3940_0790 sucC; succinyl-CoA synthetase, beta subunit\tK01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]"
				},
				{
					"name":"CUP3940_1032 frdA; fumarate reductase, flavoprotein subunit\tK00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]"
				},
				{
					"name":"CUP3940_1031 frdB; fumarate reductase, iron-sulfur subunit\tK25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]"
				},
				{
					"name":"CUP3940_1033 frdC; fumarate reductase, cytochrome b subunit\tK25996 frdC; succinate dehydrogenase subunit C"
				},
				{
					"name":"CUP3940_1284 fumC; fumarate hydratase, class II\tK01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]"
				},
				{
					"name":"CUP3940_0789 mdh; malate dehydrogenase, NAD-dependent\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]"
				},
				{
					"name":"CUP3940_1037 mqo; malate:quinone-oxidoreductase\tK00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]"
				},
				{
					"name":"CUP3940_0490 pycA; pyruvate carboxylase, subunit A\tK01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]"
				},
				{
					"name":"CUP3940_0520 pycB; pyruvate carboxylase, subunit B\tK01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]"
				},
				{
					"name":"CUP3940_0519 pckA; phosphoenolpyruvate carboxykinase (ATP)\tK01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]"
				},
				{
					"name":"CUP3940_0100 por; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric\tK03737 por; pyruvate-ferredoxin\/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.8.1]"
				}
				]
			},
			{
				"name":"00030 Pentose phosphate pathway [PATH:cux00030]",
				"children":[
				{
					"name":"CUP3940_0023 pgi; phosphoglucose isomerase\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]"
				},
				{
					"name":"CUP3940_0728 rpe; ribulose phosphate 3-epimerase\tK01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]"
				},
				{
					"name":"CUP3940_1411 tkt; transketolase\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]"
				},
				{
					"name":"CUP3940_1439 transketolase, C-terminal subunit\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]"
				},
				{
					"name":"CUP3940_1440 transketolase, N-terminal subunit\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]"
				},
				{
					"name":"CUP3940_0534 tal; transaldolase\tK00616 TALDO1; transaldolase [EC:2.2.1.2]"
				},
				{
					"name":"CUP3940_0643 rpiB; allose-6-phosphate isomerase \/ ribose-5-phosphate isomerase B\tK01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]"
				},
				{
					"name":"CUP3940_1514 phosphomannomutase \/ phosphoglucomutase\tK15778 pmm-pgm; phosphomannomutase \/ phosphoglucomutase [EC:5.4.2.8 5.4.2.2]"
				},
				{
					"name":"CUP3940_0499 prs; ribose-phosphate diphosphokinase\tK00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]"
				},
				{
					"name":"CUP3940_0263 fbaA; fructose-bisphosphate aldolase, class IIA\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]"
				},
				{
					"name":"CUP3940_0781 fbp; fructose-1,6-bisphosphatase I\tK03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]"
				}
				]
			},
			{
				"name":"00040 Pentose and glucuronate interconversions [PATH:cux00040]",
				"children":[
				{
					"name":"CUP3940_0022 galU; UTP--glucose-1-phosphate uridylyltransferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]"
				},
				{
					"name":"CUP3940_0728 rpe; ribulose phosphate 3-epimerase\tK01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]"
				}
				]
			},
			{
				"name":"00051 Fructose and mannose metabolism [PATH:cux00051]",
				"children":[
				{
					"name":"CUP3940_1514 phosphomannomutase \/ phosphoglucomutase\tK15778 pmm-pgm; phosphomannomutase \/ phosphoglucomutase [EC:5.4.2.8 5.4.2.2]"
				},
				{
					"name":"CUP3940_1441 GDP-L-fucose synthetase\tK02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]"
				},
				{
					"name":"CUP3940_1443 putative GDP-fucose synthase\tK02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]"
				},
				{
					"name":"CUP3940_1444 putative GDP-fucose synthase\tK02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]"
				},
				{
					"name":"CUP3940_1290 short-chain dehydrogenase\/reductase\tK18333 E1.1.1.435; L-fucose dehydrogenase [EC:1.1.1.435]"
				},
				{
					"name":"CUP3940_0781 fbp; fructose-1,6-bisphosphatase I\tK03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]"
				},
				{
					"name":"CUP3940_0263 fbaA; fructose-bisphosphate aldolase, class IIA\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]"
				},
				{
					"name":"CUP3940_1519 tpiA; triosephosphate isomerase\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]"
				},
				{
					"name":"CUP3940_1436 GDP-mannose 4,6-dehydratase\tK15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]"
				},
				{
					"name":"CUP3940_0643 rpiB; allose-6-phosphate isomerase \/ ribose-5-phosphate isomerase B\tK01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]"
				}
				]
			},
			{
				"name":"00052 Galactose metabolism [PATH:cux00052]",
				"children":[
				{
					"name":"CUP3940_1142 gne; UDP-GlcNAc\/Glc 4-epimerase\tK01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]"
				},
				{
					"name":"CUP3940_0022 galU; UTP--glucose-1-phosphate uridylyltransferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]"
				},
				{
					"name":"CUP3940_1514 phosphomannomutase \/ phosphoglucomutase\tK15778 pmm-pgm; phosphomannomutase \/ phosphoglucomutase [EC:5.4.2.8 5.4.2.2]"
				},
				{
					"name":"CUP3940_1455 UDP-galactopyranose mutase\tK01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]"
				}
				]
			},
			{
				"name":"00053 Ascorbate and aldarate metabolism"
			},
			{
				"name":"00500 Starch and sucrose metabolism [PATH:cux00500]",
				"children":[
				{
					"name":"CUP3940_0022 galU; UTP--glucose-1-phosphate uridylyltransferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]"
				},
				{
					"name":"CUP3940_1514 phosphomannomutase \/ phosphoglucomutase\tK15778 pmm-pgm; phosphomannomutase \/ phosphoglucomutase [EC:5.4.2.8 5.4.2.2]"
				},
				{
					"name":"CUP3940_0023 pgi; phosphoglucose isomerase\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]"
				}
				]
			},
			{
				"name":"00620 Pyruvate metabolism [PATH:cux00620]",
				"children":[
				{
					"name":"CUP3940_1272 acs; acetyl-CoA synthetase\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]"
				},
				{
					"name":"CUP3940_0100 por; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric\tK03737 por; pyruvate-ferredoxin\/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.8.1]"
				},
				{
					"name":"CUP3940_0793 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]"
				},
				{
					"name":"CUP3940_0794 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]"
				},
				{
					"name":"CUP3940_0110 zinc-dependent alcohol dehydrogenase\tK13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]"
				},
				{
					"name":"CUP3940_0852 ackA; acetate kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]"
				},
				{
					"name":"CUP3940_0851 pta; phosphate acetyltransferase\tK13788 pta; phosphate acetyltransferase [EC:2.3.1.8]"
				},
				{
					"name":"CUP3940_1036 pykF; pyruvate kinase I\tK00873 PK; pyruvate kinase [EC:2.7.1.40]"
				},
				{
					"name":"CUP3940_0967 accA; acetyl-CoA carboxylase, carboxyltransferase, alpha subunit\tK01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]"
				},
				{
					"name":"CUP3940_0283 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein\tK02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein"
				},
				{
					"name":"CUP3940_0284 accC; acetyl-CoA carboxylase, biotin carboxylase\tK01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]"
				},
				{
					"name":"CUP3940_1393 accD; acetyl-CoA carboxylase, carboxyltransferase, beta subunit\tK01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]"
				},
				{
					"name":"CUP3940_0669 FAD\/FMN-containing dehydrogenase\tK18930 dld; D-lactate dehydrogenase"
				},
				{
					"name":"CUP3940_0997 metallo-beta-lactamase family protein\tK01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]"
				},
				{
					"name":"CUP3940_0252 mez; malate oxidoreductase\tK00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]"
				},
				{
					"name":"CUP3940_0490 pycA; pyruvate carboxylase, subunit A\tK01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]"
				},
				{
					"name":"CUP3940_0520 pycB; pyruvate carboxylase, subunit B\tK01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]"
				},
				{
					"name":"CUP3940_0155 fumarylacetoacetate hydrolase family protein\tK29029 FAHD2; oxaloacetate tautomerase [EC:5.3.2.2]"
				},
				{
					"name":"CUP3940_0789 mdh; malate dehydrogenase, NAD-dependent\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]"
				},
				{
					"name":"CUP3940_1037 mqo; malate:quinone-oxidoreductase\tK00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]"
				},
				{
					"name":"CUP3940_1284 fumC; fumarate hydratase, class II\tK01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]"
				},
				{
					"name":"CUP3940_1032 frdA; fumarate reductase, flavoprotein subunit\tK00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]"
				},
				{
					"name":"CUP3940_1031 frdB; fumarate reductase, iron-sulfur subunit\tK25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]"
				},
				{
					"name":"CUP3940_1033 frdC; fumarate reductase, cytochrome b subunit\tK25996 frdC; succinate dehydrogenase subunit C"
				},
				{
					"name":"CUP3940_0519 pckA; phosphoenolpyruvate carboxykinase (ATP)\tK01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]"
				},
				{
					"name":"CUP3940_1064 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]"
				},
				{
					"name":"CUP3940_0461 FxsA family membrane protein\tK01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]"
				}
				]
			},
			{
				"name":"00630 Glyoxylate and dicarboxylate metabolism [PATH:cux00630]",
				"children":[
				{
					"name":"CUP3940_0789 mdh; malate dehydrogenase, NAD-dependent\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]"
				},
				{
					"name":"CUP3940_1562 gltA; citrate synthase\tK01647 CS; citrate synthase [EC:2.3.3.1]"
				},
				{
					"name":"CUP3940_0777 acnB; aconitate hydratase 2\tK01682 acnB; aconitate hydratase 2 \/ 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]"
				},
				{
					"name":"CUP3940_1272 acs; acetyl-CoA synthetase\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]"
				},
				{
					"name":"CUP3940_1064 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]"
				},
				{
					"name":"CUP3940_1425 glycolate oxidase, subunit GlcD-related protein\tK00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]"
				},
				{
					"name":"CUP3940_0289 anaerobic glycerol-3-phosphate dehydrogenase\tK11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]"
				},
				{
					"name":"CUP3940_0126 HAD superfamily hydrolase, probable phosphatase\tK01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]"
				},
				{
					"name":"CUP3940_0739 phosphoglycolate phosphatase-like HAD superfamily hydrolase\tK01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]"
				},
				{
					"name":"CUP3940_0958 glnA; glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]"
				},
				{
					"name":"CUP3940_1046 glyA; serine hydroxymethyltransferase\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]"
				},
				{
					"name":"CUP3940_1487 fdhA; formate dehydrogenase N, alpha subunit, selenocysteine-containing\tK00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]"
				},
				{
					"name":"CUP3940_0311 DMSO reductase beta subunit family protein\tK00124 fdoH; formate dehydrogenase iron-sulfur subunit"
				},
				{
					"name":"CUP3940_1486 fdhB; formate dehydrogenase N, beta subunit, iron-sulfur cluster subunit\tK00124 fdoH; formate dehydrogenase iron-sulfur subunit"
				},
				{
					"name":"CUP3940_1485 fdhC; formate dehydrogenase N, cytochrome b-556 subunit\tK00127 fdoI; formate dehydrogenase subunit gamma"
				},
				{
					"name":"CUP3940_0817 purU; formyltetrahydrofolate deformylase\tK01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]"
				}
				]
			},
			{
				"name":"00640 Propanoate metabolism [PATH:cux00640]",
				"children":[
				{
					"name":"CUP3940_1272 acs; acetyl-CoA synthetase\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]"
				},
				{
					"name":"CUP3940_0852 ackA; acetate kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]"
				},
				{
					"name":"CUP3940_0851 pta; phosphate acetyltransferase\tK13788 pta; phosphate acetyltransferase [EC:2.3.1.8]"
				},
				{
					"name":"CUP3940_0967 accA; acetyl-CoA carboxylase, carboxyltransferase, alpha subunit\tK01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]"
				},
				{
					"name":"CUP3940_0283 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein\tK02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein"
				},
				{
					"name":"CUP3940_0284 accC; acetyl-CoA carboxylase, biotin carboxylase\tK01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]"
				},
				{
					"name":"CUP3940_1393 accD; acetyl-CoA carboxylase, carboxyltransferase, beta subunit\tK01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]"
				},
				{
					"name":"CUP3940_0790 sucC; succinyl-CoA synthetase, beta subunit\tK01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]"
				},
				{
					"name":"CUP3940_0791 sucD; succinyl-CoA synthetase, alpha subunit\tK01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]"
				},
				{
					"name":"CUP3940_0777 acnB; aconitate hydratase 2\tK01682 acnB; aconitate hydratase 2 \/ 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]"
				}
				]
			},
			{
				"name":"00650 Butanoate metabolism [PATH:cux00650]",
				"children":[
				{
					"name":"CUP3940_1064 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]"
				},
				{
					"name":"CUP3940_1032 frdA; fumarate reductase, flavoprotein subunit\tK00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]"
				},
				{
					"name":"CUP3940_1031 frdB; fumarate reductase, iron-sulfur subunit\tK25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]"
				},
				{
					"name":"CUP3940_1033 frdC; fumarate reductase, cytochrome b subunit\tK25996 frdC; succinate dehydrogenase subunit C"
				},
				{
					"name":"CUP3940_0100 por; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric\tK03737 por; pyruvate-ferredoxin\/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.8.1]"
				},
				{
					"name":"CUP3940_0793 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]"
				},
				{
					"name":"CUP3940_0794 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]"
				},
				{
					"name":"CUP3940_1063 3-oxoacid CoA-transferase, A subunit\tK01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]"
				},
				{
					"name":"CUP3940_1062 3-oxoacid CoA-transferase, B subunit\tK01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]"
				}
				]
			},
			{
				"name":"00660 C5-Branched dibasic acid metabolism",
				"children":[
				{
					"name":"CUP3940_0790 sucC; succinyl-CoA synthetase, beta subunit\tK01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]"
				},
				{
					"name":"CUP3940_0791 sucD; succinyl-CoA synthetase, alpha subunit\tK01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]"
				}
				]
			},
			{
				"name":"00562 Inositol phosphate metabolism",
				"children":[
				{
					"name":"CUP3940_1519 tpiA; triosephosphate isomerase\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]"
				}
				]
			},
			{
				"name":"00566 Sulfoquinovose metabolism",
				"children":[
				{
					"name":"CUP3940_0789 mdh; malate dehydrogenase, NAD-dependent\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]"
				}
				]
			}
			]
		},
		{
			"name":"09102 Energy metabolism",
			"children":[
			{
				"name":"00190 Oxidative phosphorylation [PATH:cux00190]",
				"children":[
				{
					"name":"CUP3940_0328 nuoA; NADH:quinone oxidoreductase I, membrane subunit A\tK00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]"
				},
				{
					"name":"CUP3940_0329 nuoB; NADH:quinone oxidoreductase I, chain B\tK00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]"
				},
				{
					"name":"CUP3940_0330 nuoC; NADH:quinone oxidoreductase I, chain C\tK00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]"
				},
				{
					"name":"CUP3940_0331 nuoD; NADH:quinone oxidoreductase I, chain D\tK00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]"
				},
				{
					"name":"CUP3940_0332 putative NADH:quinone oxidoreductase I chain E (cl24924 superfamily)\tK00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]"
				},
				{
					"name":"CUP3940_0333 NADH:quinone oxidoreductase I, chain G-like protein (cl35703 superfamily)\tK00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]"
				},
				{
					"name":"CUP3940_0334 nuoG; NADH:quinone oxidoreductase I, chain G (cl35703 superfamily)\tK00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]"
				},
				{
					"name":"CUP3940_0335 nuoH; NADH:quinone oxidoreductase I, membrane subunit H\tK00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]"
				},
				{
					"name":"CUP3940_0336 nuoI; NADH:quinone oxidoreductase I, chain I\tK00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]"
				},
				{
					"name":"CUP3940_0337 nuoJ; NADH:quinone oxidoreductase I, membrane subunit J\tK00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]"
				},
				{
					"name":"CUP3940_0338 nuoK; NADH:quinone oxidoreductase I, membrane subunit K\tK00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]"
				},
				{
					"name":"CUP3940_0339 nuoL; NADH:quinone oxidoreductase I, membrane subunit L\tK00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]"
				},
				{
					"name":"CUP3940_0340 nuoM; NADH:quinone oxidoreductase I, membrane subunit M\tK00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]"
				},
				{
					"name":"CUP3940_0341 nuoN; NADH:quinone oxidoreductase I, membrane subunit N\tK00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]"
				},
				{
					"name":"CUP3940_1032 frdA; fumarate reductase, flavoprotein subunit\tK00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]"
				},
				{
					"name":"CUP3940_1031 frdB; fumarate reductase, iron-sulfur subunit\tK25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]"
				},
				{
					"name":"CUP3940_1033 frdC; fumarate reductase, cytochrome b subunit\tK25996 frdC; succinate dehydrogenase subunit C"
				},
				{
					"name":"CUP3940_1209 petA; ubiquinol cytochrome c oxidoreductase PetABC, [2Fe-2S] subunit\tK00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]"
				},
				{
					"name":"CUP3940_1208 petB; ubiquinol cytochrome c oxidoreductase PetABC, cytochrome b subunit\tK00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit"
				},
				{
					"name":"CUP3940_1207 petC; ubiquinol cytochrome c oxidoreductase PetABC, membrane-bound cytochrome c subunit\tK00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit"
				},
				{
					"name":"CUP3940_0112 ccoN; cytochrome c oxidase CcoNOPQ, cbb3-type, subunit I\tK00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]"
				},
				{
					"name":"CUP3940_0113 ccoO; cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit II\tK00405 ccoO; cytochrome c oxidase cbb3-type subunit II"
				},
				{
					"name":"CUP3940_0114 ccoQ; cytochrome c oxidase CcoNOPQ, cbb3-type, subunit IV\tK00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV"
				},
				{
					"name":"CUP3940_0115 ccoP; cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit III\tK00406 ccoP; cytochrome c oxidase cbb3-type subunit III"
				},
				{
					"name":"CUP3940_0102 cioA; cyanide-insensitive cytochrome oxidase CioAB, subunit I\tK00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]"
				},
				{
					"name":"CUP3940_0101 cioB; cyanide-insensitive cytochrome oxidase CioAB, subunit II\tK00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]"
				},
				{
					"name":"CUP3940_1069 cccA; periplasmic monoheme cytochrome c553\tK08738 CYC; cytochrome c"
				},
				{
					"name":"CUP3940_1583 atpA; ATP synthase, F1 complex, alpha subunit\tK02111 ATPF1A; F-type H+\/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]"
				},
				{
					"name":"CUP3940_1581 atpD; ATP synthase, F1 complex, beta subunit\tK02112 ATPF1B; F-type H+\/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]"
				},
				{
					"name":"CUP3940_1582 atpG; ATP synthase, F1 complex, gamma subunit\tK02115 ATPF1G; F-type H+-transporting ATPase subunit gamma"
				},
				{
					"name":"CUP3940_1584 atpH; ATP synthase, F1 complex, delta subunit\tK02113 ATPF1D; F-type H+-transporting ATPase subunit delta"
				},
				{
					"name":"CUP3940_1580 atpC; ATP synthase, F1 complex, epsilon subunit\tK02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon"
				},
				{
					"name":"CUP3940_0193 atpB; ATP synthase, F0 complex, a subunit\tK02108 ATPF0A; F-type H+-transporting ATPase subunit a"
				},
				{
					"name":"CUP3940_1585 atpF; ATP synthase, F0 complex, b subunit\tK02109 ATPF0B; F-type H+-transporting ATPase subunit b"
				},
				{
					"name":"CUP3940_1586 atpF'; ATP synthase, F0 complex, b' subunit\tK02109 ATPF0B; F-type H+-transporting ATPase subunit b"
				},
				{
					"name":"CUP3940_0702 atpE; ATP synthase, F0 complex, c subunit\tK02110 ATPF0C; F-type H+-transporting ATPase subunit c"
				},
				{
					"name":"CUP3940_0704 ppa; inorganic pyrophosphatase\tK01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]"
				},
				{
					"name":"CUP3940_1156 ppk; polyphosphate kinase 1\tK00937 ppk1; polyphosphate kinase [EC:2.7.4.1]"
				},
				{
					"name":"CUP3940_0256 ppk2; polyphosphate kinase 2\tK22468 ppk2; polyphosphate kinase [EC:2.7.4.34]"
				}
				]
			},
			{
				"name":"00195 Photosynthesis"
			},
			{
				"name":"00196 Photosynthesis - antenna proteins"
			},
			{
				"name":"00710 Carbon fixation by Calvin cycle [PATH:cux00710]",
				"children":[
				{
					"name":"CUP3940_1518 pgk; phosphoglycerate kinase\tK00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]"
				},
				{
					"name":"CUP3940_1517 gapA; glyceraldehyde 3-phosphate dehydrogenase A\tK00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]"
				},
				{
					"name":"CUP3940_0263 fbaA; fructose-bisphosphate aldolase, class IIA\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]"
				},
				{
					"name":"CUP3940_0781 fbp; fructose-1,6-bisphosphatase I\tK03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]"
				},
				{
					"name":"CUP3940_1411 tkt; transketolase\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]"
				},
				{
					"name":"CUP3940_1439 transketolase, C-terminal subunit\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]"
				},
				{
					"name":"CUP3940_1440 transketolase, N-terminal subunit\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]"
				},
				{
					"name":"CUP3940_0643 rpiB; allose-6-phosphate isomerase \/ ribose-5-phosphate isomerase B\tK01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]"
				},
				{
					"name":"CUP3940_1519 tpiA; triosephosphate isomerase\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]"
				},
				{
					"name":"CUP3940_0728 rpe; ribulose phosphate 3-epimerase\tK01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]"
				},
				{
					"name":"CUP3940_0534 tal; transaldolase\tK00616 TALDO1; transaldolase [EC:2.2.1.2]"
				},
				{
					"name":"CUP3940_0519 pckA; phosphoenolpyruvate carboxykinase (ATP)\tK01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]"
				},
				{
					"name":"CUP3940_0252 mez; malate oxidoreductase\tK00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]"
				},
				{
					"name":"CUP3940_0789 mdh; malate dehydrogenase, NAD-dependent\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]"
				}
				]
			},
			{
				"name":"00720 Other carbon fixation pathways [PATH:cux00720]",
				"children":[
				{
					"name":"CUP3940_0100 por; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric\tK03737 por; pyruvate-ferredoxin\/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.8.1]"
				},
				{
					"name":"CUP3940_0490 pycA; pyruvate carboxylase, subunit A\tK01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]"
				},
				{
					"name":"CUP3940_0520 pycB; pyruvate carboxylase, subunit B\tK01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]"
				},
				{
					"name":"CUP3940_0789 mdh; malate dehydrogenase, NAD-dependent\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]"
				},
				{
					"name":"CUP3940_1284 fumC; fumarate hydratase, class II\tK01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]"
				},
				{
					"name":"CUP3940_1032 frdA; fumarate reductase, flavoprotein subunit\tK00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]"
				},
				{
					"name":"CUP3940_1031 frdB; fumarate reductase, iron-sulfur subunit\tK25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]"
				},
				{
					"name":"CUP3940_1033 frdC; fumarate reductase, cytochrome b subunit\tK25996 frdC; succinate dehydrogenase subunit C"
				},
				{
					"name":"CUP3940_0791 sucD; succinyl-CoA synthetase, alpha subunit\tK01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]"
				},
				{
					"name":"CUP3940_0790 sucC; succinyl-CoA synthetase, beta subunit\tK01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]"
				},
				{
					"name":"CUP3940_1064 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]"
				},
				{
					"name":"CUP3940_0793 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]"
				},
				{
					"name":"CUP3940_0794 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]"
				},
				{
					"name":"CUP3940_0795 oorC; 2-oxoglutarate:acceptor oxidoreductase, gamma subunit\tK00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]"
				},
				{
					"name":"CUP3940_0792 oorD; 2-oxoglutarate:acceptor oxidoreductase, delta subunit\tK00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]"
				},
				{
					"name":"CUP3940_0788 icd; isocitrate dehydrogenase, monomeric\tK00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]"
				},
				{
					"name":"CUP3940_0777 acnB; aconitate hydratase 2\tK01682 acnB; aconitate hydratase 2 \/ 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]"
				},
				{
					"name":"CUP3940_0967 accA; acetyl-CoA carboxylase, carboxyltransferase, alpha subunit\tK01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]"
				},
				{
					"name":"CUP3940_0283 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein\tK02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein"
				},
				{
					"name":"CUP3940_0284 accC; acetyl-CoA carboxylase, biotin carboxylase\tK01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]"
				},
				{
					"name":"CUP3940_1393 accD; acetyl-CoA carboxylase, carboxyltransferase, beta subunit\tK01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]"
				},
				{
					"name":"CUP3940_1312 folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase \/ 5,10-methylene-tetrahydrofolate cyclohydrolase\tK01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) \/ methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]"
				},
				{
					"name":"CUP3940_0851 pta; phosphate acetyltransferase\tK13788 pta; phosphate acetyltransferase [EC:2.3.1.8]"
				},
				{
					"name":"CUP3940_0852 ackA; acetate kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]"
				},
				{
					"name":"CUP3940_1272 acs; acetyl-CoA synthetase\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]"
				}
				]
			},
			{
				"name":"00680 Methane metabolism [PATH:cux00680]",
				"children":[
				{
					"name":"CUP3940_1487 fdhA; formate dehydrogenase N, alpha subunit, selenocysteine-containing\tK00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]"
				},
				{
					"name":"CUP3940_0311 DMSO reductase beta subunit family protein\tK00124 fdoH; formate dehydrogenase iron-sulfur subunit"
				},
				{
					"name":"CUP3940_1486 fdhB; formate dehydrogenase N, beta subunit, iron-sulfur cluster subunit\tK00124 fdoH; formate dehydrogenase iron-sulfur subunit"
				},
				{
					"name":"CUP3940_1485 fdhC; formate dehydrogenase N, cytochrome b-556 subunit\tK00127 fdoI; formate dehydrogenase subunit gamma"
				},
				{
					"name":"CUP3940_1046 glyA; serine hydroxymethyltransferase\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]"
				},
				{
					"name":"CUP3940_1555 eno; enolase\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]"
				},
				{
					"name":"CUP3940_0789 mdh; malate dehydrogenase, NAD-dependent\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]"
				},
				{
					"name":"CUP3940_0263 fbaA; fructose-bisphosphate aldolase, class IIA\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]"
				},
				{
					"name":"CUP3940_0781 fbp; fructose-1,6-bisphosphatase I\tK03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]"
				},
				{
					"name":"CUP3940_0852 ackA; acetate kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]"
				},
				{
					"name":"CUP3940_0851 pta; phosphate acetyltransferase\tK13788 pta; phosphate acetyltransferase [EC:2.3.1.8]"
				},
				{
					"name":"CUP3940_1272 acs; acetyl-CoA synthetase\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]"
				},
				{
					"name":"CUP3940_1021 pgm; phosphoglycerate mutase\tK15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]"
				},
				{
					"name":"CUP3940_0983 serA; alpha-ketoglutarate reductase \/ D-3-phosphoglycerate dehydrogenase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]"
				},
				{
					"name":"CUP3940_1090 serC; phosphohydroxythreonine aminotransferase \/ 3-phosphoserine aminotransferase\tK00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]"
				},
				{
					"name":"CUP3940_0533 serB; phosphoserine phosphatase\tK01079 serB; phosphoserine phosphatase [EC:3.1.3.3]"
				}
				]
			},
			{
				"name":"00910 Nitrogen metabolism [PATH:cux00910]",
				"children":[
				{
					"name":"CUP3940_0830 napA; periplasmic nitrate reductase NapAB, large subunit\tK02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]"
				},
				{
					"name":"CUP3940_0827 napB; periplasmic nitrate reductase NapAB, small subunit, periplasmic diheme cytochrome c550 protein\tK02568 napB; nitrate reductase (cytochrome), electron transfer subunit"
				},
				{
					"name":"CUP3940_1059 nrfA; formate-dependent nitrite reductase NrfAH, periplasmic pentaheme cytochrome c subunit\tK03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]"
				},
				{
					"name":"CUP3940_1060 nrfH; formate-dependent nitrite reductase NrfAH, membrane-bound tetraheme cytochrome c subunit\tK15876 nrfH; cytochrome c nitrite reductase small subunit"
				},
				{
					"name":"CUP3940_1178 npd; nitronate monooxygenase\tK00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]"
				},
				{
					"name":"CUP3940_0438 carbon-nitrogen hydrolase family protein\tK01501 E3.5.5.1; nitrilase [EC:3.5.5.1]"
				},
				{
					"name":"CUP3940_0958 glnA; glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]"
				},
				{
					"name":"CUP3940_1639 gltB; glutamate synthase, large subunit\tK00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]"
				},
				{
					"name":"CUP3940_1642 gltD; glutamate synthase, small subunit\tK00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]"
				},
				{
					"name":"CUP3940_0153 canB; beta carbonic anhydrase, clade B\tK01673 cynT; carbonic anhydrase [EC:4.2.1.1]"
				},
				{
					"name":"CUP3940_0165 gamma carbonic anhydrase family protein\tK28956 E4.2.1.1; carbonic anhydrase [EC:4.2.1.1]"
				}
				]
			},
			{
				"name":"00920 Sulfur metabolism [PATH:cux00920]",
				"children":[
				{
					"name":"CUP3940_0316 sat; sulfate adenylyltransferase\tK00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]"
				},
				{
					"name":"CUP3940_1563 cysQ; adenosine-3'(2'),5'-bisphosphate nucleotidase\tK01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]"
				}
				]
			}
			]
		},
		{
			"name":"09103 Lipid metabolism",
			"children":[
			{
				"name":"00061 Fatty acid biosynthesis [PATH:cux00061]",
				"children":[
				{
					"name":"CUP3940_0967 accA; acetyl-CoA carboxylase, carboxyltransferase, alpha subunit\tK01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]"
				},
				{
					"name":"CUP3940_0283 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein\tK02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein"
				},
				{
					"name":"CUP3940_0284 accC; acetyl-CoA carboxylase, biotin carboxylase\tK01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]"
				},
				{
					"name":"CUP3940_1393 accD; acetyl-CoA carboxylase, carboxyltransferase, beta subunit\tK01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]"
				},
				{
					"name":"CUP3940_0969 acpP2; acyl carrier protein\tK02078 acpP; acyl carrier protein"
				},
				{
					"name":"CUP3940_1569 fabD; malonyl-CoA-[acp] transacylase\tK00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]"
				},
				{
					"name":"CUP3940_1089 fabH; beta-ketoacyl-[acp] synthase III (KASIII)\tK00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]"
				},
				{
					"name":"CUP3940_0968 fabF; beta-ketoacyl-[acp] synthase II (KASII)\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]"
				},
				{
					"name":"CUP3940_0189 ptmA; glucosamine-6-P synthase, glutaminase subunit PtmA\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]"
				},
				{
					"name":"CUP3940_1020 fabG; 3-oxoacyl-[acp] reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]"
				},
				{
					"name":"CUP3940_0215 fabZ; 3-hydroxyacyl-[acp] dehydratase\tK02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]"
				},
				{
					"name":"CUP3940_1520 fabI; enoyl-[acp] reductase\tK00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]"
				}
				]
			},
			{
				"name":"00062 Fatty acid elongation"
			},
			{
				"name":"00071 Fatty acid degradation [PATH:cux00071]",
				"children":[
				{
					"name":"CUP3940_1064 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]"
				}
				]
			},
			{
				"name":"00073 Cutin, suberine and wax biosynthesis"
			},
			{
				"name":"00074 Mycolic acid biosynthesis [PATH:cux00074]",
				"children":[
				{
					"name":"CUP3940_1512 acpS; holo-(acyl-carrier-protein) synthase\tK00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]"
				},
				{
					"name":"CUP3940_0969 acpP2; acyl carrier protein\tK02078 acpP; acyl carrier protein"
				},
				{
					"name":"CUP3940_1569 fabD; malonyl-CoA-[acp] transacylase\tK00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]"
				}
				]
			},
			{
				"name":"00100 Steroid biosynthesis"
			},
			{
				"name":"00120 Primary bile acid biosynthesis"
			},
			{
				"name":"00121 Secondary bile acid biosynthesis [PATH:cux00121]",
				"children":[
				{
					"name":"CUP3940_1162 short-chain dehydrogenase\/reductase\tK00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]"
				}
				]
			},
			{
				"name":"00140 Steroid hormone biosynthesis"
			},
			{
				"name":"00561 Glycerolipid metabolism [PATH:cux00561]",
				"children":[
				{
					"name":"CUP3940_0110 zinc-dependent alcohol dehydrogenase\tK13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]"
				},
				{
					"name":"CUP3940_1088 plsX; acyl phosphate synthase\tK03621 plsX; phosphate acyltransferase [EC:2.3.1.274]"
				},
				{
					"name":"CUP3940_0929 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase\tK08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]"
				},
				{
					"name":"CUP3940_0273 plsC; 1-acylglycerol-3-phosphate O-acyltransferase\tK00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]"
				},
				{
					"name":"CUP3940_0157 dgkA; diacylglycerol kinase\tK00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]"
				}
				]
			},
			{
				"name":"00564 Glycerophospholipid metabolism [PATH:cux00564]",
				"children":[
				{
					"name":"CUP3940_0085 gpsA; glycerol-3-phosphate dehydrogenase\tK00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]"
				},
				{
					"name":"CUP3940_0929 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase\tK08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]"
				},
				{
					"name":"CUP3940_0273 plsC; 1-acylglycerol-3-phosphate O-acyltransferase\tK00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]"
				},
				{
					"name":"CUP3940_0157 dgkA; diacylglycerol kinase\tK00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]"
				},
				{
					"name":"CUP3940_1009 pldA; phospholipase A1\tK01058 pldA; phospholipase A1\/A2 [EC:3.1.1.32 3.1.1.4]"
				},
				{
					"name":"CUP3940_0938 glycerophosphodiester phosphodiesterase\tK01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]"
				},
				{
					"name":"CUP3940_1005 cdsA; CDP-diglyceride synthetase\tK00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]"
				},
				{
					"name":"CUP3940_1106 pssA; phosphatidylserine synthase\tK17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]"
				},
				{
					"name":"CUP3940_0787 psd; phosphatidylserine decarboxylase, proenzyme\tK01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]"
				},
				{
					"name":"CUP3940_1107 phosphatidylserine decarboxylase family protein\tK01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]"
				},
				{
					"name":"CUP3940_0432 pgsA; phosphatidylglycerophosphate synthase\tK00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]"
				},
				{
					"name":"CUP3940_0315 pgpA; phosphatidylglycerophosphatase A\tK01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]"
				}
				]
			},
			{
				"name":"00565 Ether lipid metabolism [PATH:cux00565]",
				"children":[
				{
					"name":"CUP3940_1009 pldA; phospholipase A1\tK01058 pldA; phospholipase A1\/A2 [EC:3.1.1.32 3.1.1.4]"
				}
				]
			},
			{
				"name":"00600 Sphingolipid metabolism"
			},
			{
				"name":"00590 Arachidonic acid metabolism",
				"children":[
				{
					"name":"CUP3940_1009 pldA; phospholipase A1\tK01058 pldA; phospholipase A1\/A2 [EC:3.1.1.32 3.1.1.4]"
				}
				]
			},
			{
				"name":"00591 Linoleic acid metabolism",
				"children":[
				{
					"name":"CUP3940_1009 pldA; phospholipase A1\tK01058 pldA; phospholipase A1\/A2 [EC:3.1.1.32 3.1.1.4]"
				}
				]
			},
			{
				"name":"00592 alpha-Linolenic acid metabolism [PATH:cux00592]",
				"children":[
				{
					"name":"CUP3940_1009 pldA; phospholipase A1\tK01058 pldA; phospholipase A1\/A2 [EC:3.1.1.32 3.1.1.4]"
				}
				]
			},
			{
				"name":"01040 Biosynthesis of unsaturated fatty acids",
				"children":[
				{
					"name":"CUP3940_0994 acyl-CoA thioesterase\tK10806 yciA; acyl-CoA thioesterase [EC:3.1.2.-]"
				}
				]
			}
			]
		},
		{
			"name":"09104 Nucleotide metabolism",
			"children":[
			{
				"name":"00230 Purine metabolism [PATH:cux00230]",
				"children":[
				{
					"name":"CUP3940_1514 phosphomannomutase \/ phosphoglucomutase\tK15778 pmm-pgm; phosphomannomutase \/ phosphoglucomutase [EC:5.4.2.8 5.4.2.2]"
				},
				{
					"name":"CUP3940_0499 prs; ribose-phosphate diphosphokinase\tK00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]"
				},
				{
					"name":"CUP3940_1422 purF; amidophosphoribosyltransferase\tK00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]"
				},
				{
					"name":"CUP3940_1462 amidophosphoribosyltransferase\tK00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]"
				},
				{
					"name":"CUP3940_1014 purD; phosphoribosylamine-glycine ligase\tK01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]"
				},
				{
					"name":"CUP3940_1347 purN; phosphoribosylglycinamide formyltransferase 1\tK11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]"
				},
				{
					"name":"CUP3940_0868 purL; phosphoribosylformylglycinamidine synthase PurLQS, PurL subunit\tK23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]"
				},
				{
					"name":"CUP3940_0276 purS; phosphoribosylformylglycinamidine synthase PurLQS, PurS subunit\tK23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]"
				},
				{
					"name":"CUP3940_0275 purQ; phosphoribosylformylglycinamidine synthase PurLQS, glutaminase subunit PurQ\tK23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ \/ glutaminase [EC:6.3.5.3 3.5.1.2]"
				},
				{
					"name":"CUP3940_0197 purM; phosphoribosylformylglycinamide cyclo-ligase\tK01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]"
				},
				{
					"name":"CUP3940_0955 purE2; 5-aminoimidazole ribonucleotide (AIR) carboxylase\tK01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]"
				},
				{
					"name":"CUP3940_0277 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase\tK01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]"
				},
				{
					"name":"CUP3940_1613 purB; adenylosuccinate lyase\tK01756 purB; adenylosuccinate lyase [EC:4.3.2.2]"
				},
				{
					"name":"CUP3940_0973 purH; AICAR transformylase \/ IMP cyclohydrolase\tK00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase \/ IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]"
				},
				{
					"name":"CUP3940_0645 apt; adenine phosphoribosyltransferase\tK00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]"
				},
				{
					"name":"CUP3940_0523 umpG; broad specificity 5'(3')-nucleotidase and polyphosphatase\tK03787 surE; 5'\/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]"
				},
				{
					"name":"CUP3940_0965 multi-copper polyphenol oxidoreductase laccase\tK05810 LACC1; purine-nucleoside\/S-methyl-5'-thioadenosine phosphorylase \/ adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]"
				},
				{
					"name":"CUP3940_0436 guaB; inosine-5'-monophosphate dehydrogenase\tK00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]"
				},
				{
					"name":"CUP3940_1085 ndk; nucleoside diphosphate kinase\tK00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]"
				},
				{
					"name":"CUP3940_1274 putative dITP\/XTP pyrophosphatase\tK01519 rdgB; XTP\/dITP diphosphohydrolase [EC:3.6.1.66]"
				},
				{
					"name":"CUP3940_1278 putative nucleotide phosphoribosyltransferase\tK00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]"
				},
				{
					"name":"CUP3940_1252 guaA; GMP synthase (glutamine-hydrolyzing)\tK01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]"
				},
				{
					"name":"CUP3940_1201 gmk; deoxyguanylate kinase \/ guanylate kinase\tK00942 gmk; guanylate kinase [EC:2.7.4.8]"
				},
				{
					"name":"CUP3940_1614 nrdA; aerobic ribonucleoside-diphosphate reductase Ia, B1 protein subunit NrdA\tK00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]"
				},
				{
					"name":"CUP3940_0147 nrdB; aerobic ribonucleoside-diphosphate reductase Ia, B2 protein subunit NrdB\tK00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]"
				},
				{
					"name":"CUP3940_1180 spoT; ppGpp synthetase \/ guanosine-3',5'-bis(diphosphate) 3' pyrophosphohydrolase\tK01139 spoT; GTP diphosphokinase \/ guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]"
				},
				{
					"name":"CUP3940_0735 exopolyphosphatase, Ppx\/GppA family\tK01524 ppx-gppA; exopolyphosphatase \/ guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]"
				},
				{
					"name":"CUP3940_0912 gppA; guanosine-5'-triphosphate, 3'-diphosphate pyrophosphatase\tK01524 ppx-gppA; exopolyphosphatase \/ guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]"
				},
				{
					"name":"CUP3940_0800 oligoribonuclease NrnB\tK07097 E3.1.4.17; 3',5'-cyclic-nucleotide phosphodiesterase [EC:3.1.4.17]"
				},
				{
					"name":"CUP3940_0141 purA; adenylosuccinate synthetase\tK01939 purA; adenylosuccinate synthase [EC:6.3.4.4]"
				},
				{
					"name":"CUP3940_0844 adk; adenylate kinase\tK00939 adk; adenylate kinase [EC:2.7.4.3]"
				},
				{
					"name":"CUP3940_1218 histidine triad nucleotide-binding protein, Fhit branch\tK19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]"
				},
				{
					"name":"CUP3940_0316 sat; sulfate adenylyltransferase\tK00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]"
				}
				]
			},
			{
				"name":"00240 Pyrimidine metabolism [PATH:cux00240]",
				"children":[
				{
					"name":"CUP3940_0220 carB; carbamoylphosphate synthase, large subunit\tK01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]"
				},
				{
					"name":"CUP3940_0137 carA; carbamoylphosphate synthase, small subunit\tK01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]"
				},
				{
					"name":"CUP3940_0897 pyrB; aspartate carbamoyltransferase, catalytic subunit\tK00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]"
				},
				{
					"name":"CUP3940_0084 dihydroorotase, subgroup IIa\tK01465 URA4; dihydroorotase [EC:3.5.2.3]"
				},
				{
					"name":"CUP3940_1423 pyrC; dihydroorotase, homodimeric type\tK01465 URA4; dihydroorotase [EC:3.5.2.3]"
				},
				{
					"name":"CUP3940_1165 pyrD; dihydroorotate dehydrogenase 2\tK00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]"
				},
				{
					"name":"CUP3940_0149 pyrE; orotate phosphoribosyltransferase\tK00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]"
				},
				{
					"name":"CUP3940_0169 pyrF; orotidine-5'-phosphate decarboxylase\tK01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]"
				},
				{
					"name":"CUP3940_1182 pyrH; uridylate kinase\tK09903 pyrH; uridylate kinase [EC:2.7.4.22]"
				},
				{
					"name":"CUP3940_1085 ndk; nucleoside diphosphate kinase\tK00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]"
				},
				{
					"name":"CUP3940_0364 maf; septum formation protein Maf\tK06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]"
				},
				{
					"name":"CUP3940_0247 pyrG; CTP synthetase\tK01937 pyrG; CTP synthase [EC:6.3.4.2]"
				},
				{
					"name":"CUP3940_0523 umpG; broad specificity 5'(3')-nucleotidase and polyphosphatase\tK03787 surE; 5'\/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]"
				},
				{
					"name":"CUP3940_0228 dcd; dCTP deaminase\tK01494 dcd; dCTP deaminase [EC:3.5.4.13]"
				},
				{
					"name":"CUP3940_1614 nrdA; aerobic ribonucleoside-diphosphate reductase Ia, B1 protein subunit NrdA\tK00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]"
				},
				{
					"name":"CUP3940_0147 nrdB; aerobic ribonucleoside-diphosphate reductase Ia, B2 protein subunit NrdB\tK00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]"
				},
				{
					"name":"CUP3940_0369 tmk; dTMP kinase\tK00943 tmk; dTMP kinase [EC:2.7.4.9]"
				},
				{
					"name":"CUP3940_0249 thyX; thymidylate synthase, flavin-dependent\tK03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]"
				},
				{
					"name":"CUP3940_0775 short-chain dehydrogenase\/reductase, subgroup 5\tK16066 ydfG; 3-hydroxy acid dehydrogenase \/ malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]"
				}
				]
			}
			]
		},
		{
			"name":"09105 Amino acid metabolism",
			"children":[
			{
				"name":"00250 Alanine, aspartate and glutamate metabolism [PATH:cux00250]",
				"children":[
				{
					"name":"CUP3940_0642 aspB; aspartate aminotransferase, class I and II aminotransferase\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]"
				},
				{
					"name":"CUP3940_0282 ansB; asparaginase II\tK01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]"
				},
				{
					"name":"CUP3940_0903 isoaspartyl peptidase \/ L-asparaginase\tK13051 ASRGL1; L-asparaginase \/ beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]"
				},
				{
					"name":"CUP3940_0068 aspA; aspartate ammonia-lyase\tK01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]"
				},
				{
					"name":"CUP3940_0845 argG; argininosuccinate synthase\tK01940 argG; argininosuccinate synthase [EC:6.3.4.5]"
				},
				{
					"name":"CUP3940_0518 argH; argininosuccinate lyase\tK01755 argH; argininosuccinate lyase [EC:4.3.2.1]"
				},
				{
					"name":"CUP3940_0141 purA; adenylosuccinate synthetase\tK01939 purA; adenylosuccinate synthase [EC:6.3.4.4]"
				},
				{
					"name":"CUP3940_1613 purB; adenylosuccinate lyase\tK01756 purB; adenylosuccinate lyase [EC:4.3.2.2]"
				},
				{
					"name":"CUP3940_0897 pyrB; aspartate carbamoyltransferase, catalytic subunit\tK00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]"
				},
				{
					"name":"CUP3940_1639 gltB; glutamate synthase, large subunit\tK00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]"
				},
				{
					"name":"CUP3940_1642 gltD; glutamate synthase, small subunit\tK00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]"
				},
				{
					"name":"CUP3940_1549 putA; proline dehydrogenase \/ 1-pyrroline-5-carboxylate dehydrogenase\tK13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor \/ proline dehydrogenase \/ delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]"
				},
				{
					"name":"CUP3940_0958 glnA; glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]"
				},
				{
					"name":"CUP3940_0220 carB; carbamoylphosphate synthase, large subunit\tK01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]"
				},
				{
					"name":"CUP3940_0137 carA; carbamoylphosphate synthase, small subunit\tK01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]"
				},
				{
					"name":"CUP3940_0275 purQ; phosphoribosylformylglycinamidine synthase PurLQS, glutaminase subunit PurQ\tK23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ \/ glutaminase [EC:6.3.5.3 3.5.1.2]"
				},
				{
					"name":"CUP3940_1283 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]"
				},
				{
					"name":"CUP3940_1422 purF; amidophosphoribosyltransferase\tK00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]"
				},
				{
					"name":"CUP3940_1462 amidophosphoribosyltransferase\tK00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]"
				}
				]
			},
			{
				"name":"00260 Glycine, serine and threonine metabolism [PATH:cux00260]",
				"children":[
				{
					"name":"CUP3940_0580 lysC; aspartokinase, alpha and beta subunits\tK00928 lysC; aspartate kinase [EC:2.7.2.4]"
				},
				{
					"name":"CUP3940_0476 asd; aspartate-semialdehyde dehydrogenase\tK00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]"
				},
				{
					"name":"CUP3940_0359 hom; homoserine dehydrogenase\tK00003 hom; homoserine dehydrogenase [EC:1.1.1.3]"
				},
				{
					"name":"CUP3940_1399 thrB; homoserine kinase\tK00872 thrB; homoserine kinase [EC:2.7.1.39]"
				},
				{
					"name":"CUP3940_0496 thrC; threonine synthase\tK01733 thrC; threonine synthase [EC:4.2.3.1]"
				},
				{
					"name":"CUP3940_1046 glyA; serine hydroxymethyltransferase\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]"
				},
				{
					"name":"CUP3940_1021 pgm; phosphoglycerate mutase\tK15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]"
				},
				{
					"name":"CUP3940_0983 serA; alpha-ketoglutarate reductase \/ D-3-phosphoglycerate dehydrogenase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]"
				},
				{
					"name":"CUP3940_1090 serC; phosphohydroxythreonine aminotransferase \/ 3-phosphoserine aminotransferase\tK00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]"
				},
				{
					"name":"CUP3940_0533 serB; phosphoserine phosphatase\tK01079 serB; phosphoserine phosphatase [EC:3.1.3.3]"
				},
				{
					"name":"CUP3940_0775 short-chain dehydrogenase\/reductase, subgroup 5\tK16066 ydfG; 3-hydroxy acid dehydrogenase \/ malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]"
				},
				{
					"name":"CUP3940_1106 pssA; phosphatidylserine synthase\tK17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]"
				},
				{
					"name":"CUP3940_0908 trpA; tryptophan synthase, alpha subunit\tK01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]"
				},
				{
					"name":"CUP3940_0907 trpB; tryptophan synthase, beta subunit\tK01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]"
				}
				]
			},
			{
				"name":"00270 Cysteine and methionine metabolism [PATH:cux00270]",
				"children":[
				{
					"name":"CUP3940_0810 metC; cystathionine-beta-lyase\tK01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]"
				},
				{
					"name":"CUP3940_0054 metK; S-adenosylmethionine synthetase\tK00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]"
				},
				{
					"name":"CUP3940_1568 pfs; multifunctional 5'-methylthioadenosine \/ S-adenosylhomocysteine nucleosidase \/ 6-amino-6-deoxyfutalosine hydrolase\tK18284 K18284; adenosylhomocysteine\/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30]"
				},
				{
					"name":"CUP3940_0965 multi-copper polyphenol oxidoreductase laccase\tK05810 LACC1; purine-nucleoside\/S-methyl-5'-thioadenosine phosphorylase \/ adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]"
				},
				{
					"name":"CUP3940_0551 type II cytosine-specific DNA methyltransferase\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]"
				},
				{
					"name":"CUP3940_1467 type IIP restriction\/modification system, cytosine-specific DNA methyltransferase\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]"
				},
				{
					"name":"CUP3940_1640 type IIP restriction\/modification system, cytosine-specific DNA methyltransferase\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]"
				},
				{
					"name":"CUP3940_0580 lysC; aspartokinase, alpha and beta subunits\tK00928 lysC; aspartate kinase [EC:2.7.2.4]"
				},
				{
					"name":"CUP3940_0476 asd; aspartate-semialdehyde dehydrogenase\tK00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]"
				},
				{
					"name":"CUP3940_0359 hom; homoserine dehydrogenase\tK00003 hom; homoserine dehydrogenase [EC:1.1.1.3]"
				},
				{
					"name":"CUP3940_1399 thrB; homoserine kinase\tK00872 thrB; homoserine kinase [EC:2.7.1.39]"
				},
				{
					"name":"CUP3940_0205 ilvE; branched-chain amino-acid aminotransferase\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]"
				},
				{
					"name":"CUP3940_0642 aspB; aspartate aminotransferase, class I and II aminotransferase\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]"
				},
				{
					"name":"CUP3940_0789 mdh; malate dehydrogenase, NAD-dependent\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]"
				},
				{
					"name":"CUP3940_0983 serA; alpha-ketoglutarate reductase \/ D-3-phosphoglycerate dehydrogenase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]"
				},
				{
					"name":"CUP3940_1090 serC; phosphohydroxythreonine aminotransferase \/ 3-phosphoserine aminotransferase\tK00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]"
				}
				]
			},
			{
				"name":"00280 Valine, leucine and isoleucine degradation [PATH:cux00280]",
				"children":[
				{
					"name":"CUP3940_0205 ilvE; branched-chain amino-acid aminotransferase\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]"
				},
				{
					"name":"CUP3940_1063 3-oxoacid CoA-transferase, A subunit\tK01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]"
				},
				{
					"name":"CUP3940_1062 3-oxoacid CoA-transferase, B subunit\tK01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]"
				},
				{
					"name":"CUP3940_1064 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]"
				}
				]
			},
			{
				"name":"00290 Valine, leucine and isoleucine biosynthesis [PATH:cux00290]",
				"children":[
				{
					"name":"CUP3940_0757 ilvC; acetohydroxy acid isomeroreductase\tK00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]"
				},
				{
					"name":"CUP3940_0205 ilvE; branched-chain amino-acid aminotransferase\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]"
				},
				{
					"name":"CUP3940_0461 FxsA family membrane protein\tK01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]"
				}
				]
			},
			{
				"name":"00300 Lysine biosynthesis [PATH:cux00300]",
				"children":[
				{
					"name":"CUP3940_0359 hom; homoserine dehydrogenase\tK00003 hom; homoserine dehydrogenase [EC:1.1.1.3]"
				},
				{
					"name":"CUP3940_0580 lysC; aspartokinase, alpha and beta subunits\tK00928 lysC; aspartate kinase [EC:2.7.2.4]"
				},
				{
					"name":"CUP3940_0476 asd; aspartate-semialdehyde dehydrogenase\tK00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]"
				},
				{
					"name":"CUP3940_1163 dapA; 4-hydroxy-tetrahydrodipicolinate synthase\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]"
				},
				{
					"name":"CUP3940_1421 dapB; 4-hydroxy-tetrahydrodipicolinate reductase\tK00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]"
				},
				{
					"name":"CUP3940_0162 dapD; tetrahydrodipicolinate succinylase\tK00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]"
				},
				{
					"name":"CUP3940_1621 argD; N-succinyldiaminopimelate-aminotransferase \/ acetylornithine transaminase\tK00821 argD; acetylornithine\/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]"
				},
				{
					"name":"CUP3940_0609 dapE; N-succinyl-diaminopimelate deacylase\tK01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]"
				},
				{
					"name":"CUP3940_0199 dapF; diaminopimelate epimerase\tK01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]"
				},
				{
					"name":"CUP3940_0538 lysA; diaminopimelate decarboxylase\tK01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]"
				},
				{
					"name":"CUP3940_1407 murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase\tK01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]"
				},
				{
					"name":"CUP3940_0467 murF; D-alanyl-D-alanine-adding enzyme\tK01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]"
				}
				]
			},
			{
				"name":"00310 Lysine degradation [PATH:cux00310]",
				"children":[
				{
					"name":"CUP3940_1064 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]"
				},
				{
					"name":"CUP3940_0544 D-amino acid aminotransferase\tK00824 dat; D-alanine transaminase [EC:2.6.1.21]"
				}
				]
			},
			{
				"name":"00220 Arginine biosynthesis [PATH:cux00220]",
				"children":[
				{
					"name":"CUP3940_0292 argF; ornithine carbamoyltransferase\tK00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]"
				},
				{
					"name":"CUP3940_0845 argG; argininosuccinate synthase\tK01940 argG; argininosuccinate synthase [EC:6.3.4.5]"
				},
				{
					"name":"CUP3940_0518 argH; argininosuccinate lyase\tK01755 argH; argininosuccinate lyase [EC:4.3.2.1]"
				},
				{
					"name":"CUP3940_0275 purQ; phosphoribosylformylglycinamidine synthase PurLQS, glutaminase subunit PurQ\tK23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ \/ glutaminase [EC:6.3.5.3 3.5.1.2]"
				},
				{
					"name":"CUP3940_0958 glnA; glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]"
				},
				{
					"name":"CUP3940_0220 carB; carbamoylphosphate synthase, large subunit\tK01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]"
				},
				{
					"name":"CUP3940_0137 carA; carbamoylphosphate synthase, small subunit\tK01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]"
				},
				{
					"name":"CUP3940_0642 aspB; aspartate aminotransferase, class I and II aminotransferase\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]"
				},
				{
					"name":"CUP3940_1623 argO; acetyltransferase\tK22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]"
				},
				{
					"name":"CUP3940_1622 argB; acetylglutamate kinase\tK00930 argB; acetylglutamate kinase [EC:2.7.2.8]"
				},
				{
					"name":"CUP3940_1624 argC; N-acetyl-gamma-glutamylphosphate reductase, common form\tK00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]"
				},
				{
					"name":"CUP3940_1621 argD; N-succinyldiaminopimelate-aminotransferase \/ acetylornithine transaminase\tK00821 argD; acetylornithine\/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]"
				}
				]
			},
			{
				"name":"00330 Arginine and proline metabolism [PATH:cux00330]",
				"children":[
				{
					"name":"CUP3940_0367 speA; arginine decarboxylase\tK01585 speA; arginine decarboxylase [EC:4.1.1.19]"
				},
				{
					"name":"CUP3940_0747 aguA; agmatine deiminase\tK10536 aguA; agmatine deiminase [EC:3.5.3.12]"
				},
				{
					"name":"CUP3940_0749 aguB; N-carbamoylputrescine amidohydrolase\tK12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]"
				},
				{
					"name":"CUP3940_0144 saccharopine dehydrogenase-like protein\tK27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]"
				},
				{
					"name":"CUP3940_1490 nspC; carboxynorspermidine decarboxylase\tK27684 capadc; carboxyaminopropylagmatine decarboxylase [EC:4.1.1.127]"
				},
				{
					"name":"CUP3940_0424 proC; pyrroline-5-carboxylate reductase\tK00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]"
				},
				{
					"name":"CUP3940_1549 putA; proline dehydrogenase \/ 1-pyrroline-5-carboxylate dehydrogenase\tK13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor \/ proline dehydrogenase \/ delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]"
				},
				{
					"name":"CUP3940_0642 aspB; aspartate aminotransferase, class I and II aminotransferase\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]"
				},
				{
					"name":"CUP3940_0544 D-amino acid aminotransferase\tK00824 dat; D-alanine transaminase [EC:2.6.1.21]"
				}
				]
			},
			{
				"name":"00340 Histidine metabolism [PATH:cux00340]",
				"children":[
				{
					"name":"CUP3940_1367 hisG(L); ATP phosphoribosyltransferase, hexameric long form\tK00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]"
				},
				{
					"name":"CUP3940_1357 hisIE; phosphoribosyl-AMP cyclohydrolase \/ phosphoribosyl-ATP pyrophosphatase\tK11755 hisIE; phosphoribosyl-AMP cyclohydrolase \/ phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]"
				},
				{
					"name":"CUP3940_1361 hisA; N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase\tK01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]"
				},
				{
					"name":"CUP3940_1362 hisH; imidazole glycerol phosphate synthase HisFH, HisH subunit\tK02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]"
				},
				{
					"name":"CUP3940_1359 hisF; imidazole glycerol phosphate synthase HisFH, HisF subunit\tK02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]"
				},
				{
					"name":"CUP3940_1365 hisBJ; imidazoleglycerol-phosphate dehydratase \/ histidinol-phosphatase\tK01089 hisB; imidazoleglycerol-phosphate dehydratase \/ histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]"
				},
				{
					"name":"CUP3940_1099 hisC; histidinol-phosphate aminotransferase\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]"
				},
				{
					"name":"CUP3940_1366 hisD; histidinal dehydrogenase \/ histidinol dehydrogenase\tK00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]"
				}
				]
			},
			{
				"name":"00350 Tyrosine metabolism [PATH:cux00350]",
				"children":[
				{
					"name":"CUP3940_0642 aspB; aspartate aminotransferase, class I and II aminotransferase\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]"
				},
				{
					"name":"CUP3940_1099 hisC; histidinol-phosphate aminotransferase\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]"
				}
				]
			},
			{
				"name":"00360 Phenylalanine metabolism [PATH:cux00360]",
				"children":[
				{
					"name":"CUP3940_0642 aspB; aspartate aminotransferase, class I and II aminotransferase\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]"
				},
				{
					"name":"CUP3940_1099 hisC; histidinol-phosphate aminotransferase\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]"
				},
				{
					"name":"CUP3940_0544 D-amino acid aminotransferase\tK00824 dat; D-alanine transaminase [EC:2.6.1.21]"
				},
				{
					"name":"CUP3940_1464 4-hydroxy-2-oxovalerate aldolase-like protein\tK01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]"
				}
				]
			},
			{
				"name":"00380 Tryptophan metabolism [PATH:cux00380]",
				"children":[
				{
					"name":"CUP3940_1064 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]"
				},
				{
					"name":"CUP3940_0438 carbon-nitrogen hydrolase family protein\tK01501 E3.5.5.1; nitrilase [EC:3.5.5.1]"
				}
				]
			},
			{
				"name":"00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cux00400]",
				"children":[
				{
					"name":"CUP3940_0942 aroG; 2-dehydro-3-deoxyphosphoheptonate aldolase (DAHP synthetase, class II)\tK01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]"
				},
				{
					"name":"CUP3940_0561 aroB; 3-dehydroquinate synthase\tK01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]"
				},
				{
					"name":"CUP3940_0633 aroD; 3-dehydroquinate dehydratase\tK03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]"
				},
				{
					"name":"CUP3940_1049 aroE; shikimate dehydrogenase\tK00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]"
				},
				{
					"name":"CUP3940_0242 aroK; shikimate kinase\tK00891 aroK; shikimate kinase [EC:2.7.1.71]"
				},
				{
					"name":"CUP3940_0979 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase\tK00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]"
				},
				{
					"name":"CUP3940_0307 aroC; chorismate synthase\tK01736 aroC; chorismate synthase [EC:4.2.3.5]"
				},
				{
					"name":"CUP3940_0904 trpE; anthranilate synthase component I\tK01657 trpE; anthranilate synthase component I [EC:4.1.3.27]"
				},
				{
					"name":"CUP3940_0905 trpDG; anthranilate phosphoribosyltransferase \/ anthranilate synthase component II\tK13497 trpGD; anthranilate synthase\/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18]"
				},
				{
					"name":"CUP3940_0906 trpF; phosphoribosylanthranilate isomerase\tK01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]"
				},
				{
					"name":"CUP3940_1219 trpC; indole-3-glycerol phosphate synthase\tK01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]"
				},
				{
					"name":"CUP3940_0908 trpA; tryptophan synthase, alpha subunit\tK01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]"
				},
				{
					"name":"CUP3940_0907 trpB; tryptophan synthase, beta subunit\tK01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]"
				},
				{
					"name":"CUP3940_1018 pheA; chorismate mutase \/ prephenate dehydratase\tK14170 pheA; chorismate mutase \/ prephenate dehydratase [EC:5.4.99.5 4.2.1.51]"
				},
				{
					"name":"CUP3940_1395 tyrA; chorismate mutase \/ prephenate dehydrogenase\tK04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]"
				},
				{
					"name":"CUP3940_0642 aspB; aspartate aminotransferase, class I and II aminotransferase\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]"
				},
				{
					"name":"CUP3940_1099 hisC; histidinol-phosphate aminotransferase\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]"
				}
				]
			}
			]
		},
		{
			"name":"09106 Metabolism of other amino acids",
			"children":[
			{
				"name":"00410 beta-Alanine metabolism [PATH:cux00410]",
				"children":[
				{
					"name":"CUP3940_0570 panD; aspartate 1-decarboxylase\tK01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]"
				},
				{
					"name":"CUP3940_0856 panC; pantothenate synthetase\tK01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]"
				}
				]
			},
			{
				"name":"00430 Taurine and hypotaurine metabolism [PATH:cux00430]",
				"children":[
				{
					"name":"CUP3940_0851 pta; phosphate acetyltransferase\tK13788 pta; phosphate acetyltransferase [EC:2.3.1.8]"
				},
				{
					"name":"CUP3940_0852 ackA; acetate kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]"
				}
				]
			},
			{
				"name":"00440 Phosphonate and phosphinate metabolism"
			},
			{
				"name":"00450 Selenocompound metabolism [PATH:cux00450]",
				"children":[
				{
					"name":"CUP3940_0810 metC; cystathionine-beta-lyase\tK01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]"
				},
				{
					"name":"CUP3940_0576 NADPH oxidoreductase, putative flavodoxin quinone reductase FqrB\tK00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]"
				},
				{
					"name":"CUP3940_1495 trxB; thioredoxin reductase\tK00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]"
				},
				{
					"name":"CUP3940_0316 sat; sulfate adenylyltransferase\tK00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]"
				},
				{
					"name":"CUP3940_1532 selD; selenophosphate synthetase\tK01008 selD; selenide, water dikinase [EC:2.7.9.3]"
				},
				{
					"name":"CUP3940_1470 selA; selenocysteine synthase\tK01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]"
				},
				{
					"name":"CUP3940_0779 metS; methionyl-tRNA synthetase\tK01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]"
				}
				]
			},
			{
				"name":"00460 Cyanoamino acid metabolism [PATH:cux00460]",
				"children":[
				{
					"name":"CUP3940_0438 carbon-nitrogen hydrolase family protein\tK01501 E3.5.5.1; nitrilase [EC:3.5.5.1]"
				},
				{
					"name":"CUP3940_0282 ansB; asparaginase II\tK01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]"
				},
				{
					"name":"CUP3940_0903 isoaspartyl peptidase \/ L-asparaginase\tK13051 ASRGL1; L-asparaginase \/ beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]"
				},
				{
					"name":"CUP3940_1046 glyA; serine hydroxymethyltransferase\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]"
				}
				]
			},
			{
				"name":"00470 D-Amino acid metabolism [PATH:cux00470]",
				"children":[
				{
					"name":"CUP3940_0987 alr; alanine racemase\tK01775 alr; alanine racemase [EC:5.1.1.1]"
				},
				{
					"name":"CUP3940_0544 D-amino acid aminotransferase\tK00824 dat; D-alanine transaminase [EC:2.6.1.21]"
				},
				{
					"name":"CUP3940_0470 ddlA; D-alanine--D-alanine ligase\tK01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]"
				},
				{
					"name":"CUP3940_0275 purQ; phosphoribosylformylglycinamidine synthase PurLQS, glutaminase subunit PurQ\tK23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ \/ glutaminase [EC:6.3.5.3 3.5.1.2]"
				},
				{
					"name":"CUP3940_0618 murI; glutamate racemase\tK01776 murI; glutamate racemase [EC:5.1.1.3]"
				},
				{
					"name":"CUP3940_1153 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase\tK01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]"
				},
				{
					"name":"CUP3940_0199 dapF; diaminopimelate epimerase\tK01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]"
				},
				{
					"name":"CUP3940_0538 lysA; diaminopimelate decarboxylase\tK01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]"
				}
				]
			},
			{
				"name":"00480 Glutathione metabolism [PATH:cux00480]",
				"children":[
				{
					"name":"CUP3940_0647 leucyl aminopeptidase, peptidase M17 family\tK01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]"
				},
				{
					"name":"CUP3940_1161 pepD; peptidase D\tK01270 pepD; dipeptidase D [EC:3.4.13.-]"
				},
				{
					"name":"CUP3940_0788 icd; isocitrate dehydrogenase, monomeric\tK00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]"
				}
				]
			}
			]
		},
		{
			"name":"09107 Glycan biosynthesis and metabolism",
			"children":[
			{
				"name":"00520 Amino sugar and nucleotide sugar metabolism [PATH:cux00520]",
				"children":[
				{
					"name":"CUP3940_0764 glmU; fused N-acetylglucosamine-1-phosphate uridyltransferase and glucosamine-1-phosphate acetyltransferase\tK04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase \/ glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]"
				},
				{
					"name":"CUP3940_0657 murA; UDP-N-acetylglucosamine enolpyruvoyl transferase\tK00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]"
				},
				{
					"name":"CUP3940_1559 murB; UDP-N-acetylenolpyruvoylglucosamine reductase\tK00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]"
				},
				{
					"name":"CUP3940_0926 glmM; phosphoglucosamine mutase\tK03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]"
				},
				{
					"name":"CUP3940_1283 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]"
				},
				{
					"name":"CUP3940_0023 pgi; phosphoglucose isomerase\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]"
				},
				{
					"name":"CUP3940_1514 phosphomannomutase \/ phosphoglucomutase\tK15778 pmm-pgm; phosphomannomutase \/ phosphoglucomutase [EC:5.4.2.8 5.4.2.2]"
				},
				{
					"name":"CUP3940_0022 galU; UTP--glucose-1-phosphate uridylyltransferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]"
				},
				{
					"name":"CUP3940_1142 gne; UDP-GlcNAc\/Glc 4-epimerase\tK01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]"
				},
				{
					"name":"CUP3940_1455 UDP-galactopyranose mutase\tK01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]"
				}
				]
			},
			{
				"name":"00541 Biosynthesis of various nucleotide sugars [PATH:cux00541]",
				"children":[
				{
					"name":"CUP3940_0764 glmU; fused N-acetylglucosamine-1-phosphate uridyltransferase and glucosamine-1-phosphate acetyltransferase\tK04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase \/ glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]"
				},
				{
					"name":"CUP3940_1332 pseB; UDP-N-acetylglucosamine 4,6-dehydratase\tK15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.115]"
				},
				{
					"name":"CUP3940_1333 pseC; UDP-2-acetamido-2,6-dideoxy-beta-L-arabino-hex-4-ulose aminotransferase\tK15895 pseC; UDP-4-amino-4,6-dideoxy-L-N-acetyl-beta-L-altrosamine transaminase [EC:2.6.1.92]"
				},
				{
					"name":"CUP3940_0286 pseH; UDP-4-amino-4,6-dideoxy-beta-L-AltNAc o-acetyltransferase\tK15896 pseH; UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase [EC:2.3.1.202]"
				},
				{
					"name":"CUP3940_0287 pseG; UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranosyl transferase\tK15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]"
				},
				{
					"name":"CUP3940_1257 pseI; pseudaminic acid synthase\tK15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]"
				},
				{
					"name":"CUP3940_0288 pseF; CMP-pseudaminic acid synthetase\tK15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]"
				},
				{
					"name":"CUP3940_1112 pglF; UDP-N-acetylglucosamine C-6 dehydratase\tK15912 pglF; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]"
				},
				{
					"name":"CUP3940_1113 pglE; UDP-4-amino-4,6-dideoxy-alpha-D-N-acetyl-D-glucosamine transaminase\tK15910 pglE; UDP-N-acetylbacillosamine transaminase [EC:2.6.1.34]"
				},
				{
					"name":"CUP3940_1134 pglD; UDP-4-amino-4,6-dideoxy-alpha-D-N-acetyl-D-glucosamine N-acetyltransferase\tK15913 pglD; UDP-N-acetylbacillosamine N-acetyltransferase [EC:2.3.1.203]"
				},
				{
					"name":"CUP3940_0185 legG; GDP-2,4-diacetamido-2,4, 6-trideoxy-alpha-D-glucopyranose hydrolase \/ 2-epimerase\tK18429 legG; GDP\/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing) [EC:3.2.1.184]"
				},
				{
					"name":"CUP3940_0184 legI; legionaminic acid synthase\tK18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101]"
				},
				{
					"name":"CUP3940_0188 legF; CMP-legionaminic acid synthetase\tK18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82]"
				},
				{
					"name":"CUP3940_0661 kpsF; D-arabinose 5-phosphate isomerase\tK06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]"
				},
				{
					"name":"CUP3940_0172 kdsA; 3-deoxy-D-manno-octulosonate 8-phosphate synthase\tK01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]"
				},
				{
					"name":"CUP3940_0836 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family\tK03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]"
				},
				{
					"name":"CUP3940_0495 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase\tK00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]"
				},
				{
					"name":"CUP3940_1460 putative 3-deoxy-manno-octulosonate cytidylyltransferase\tK00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]"
				},
				{
					"name":"CUP3940_0881 neuC; UDP-N-acetylglucosamine 2-epimerase\tK08068 siaA; UDP-N-acetylglucosamine 2-epimerase (hydrolysing) [EC:3.2.1.183]"
				},
				{
					"name":"CUP3940_0880 neuB; sialic acid synthase (N-acetylneuraminic acid synthetase)\tK01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]"
				},
				{
					"name":"CUP3940_1432 phosphoheptose isomerase\tK03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]"
				},
				{
					"name":"CUP3940_1433 sugar kinase\tK07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]"
				},
				{
					"name":"CUP3940_1070 gmhB; D,D-heptose 1,7-bisphosphate phosphatase\tK03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]"
				},
				{
					"name":"CUP3940_1431 sugar-phosphate nucleotidyltransferase\tK15669 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71]"
				},
				{
					"name":"CUP3940_1072 waaE; D,D-heptose 1-phosphate adenosyltransferase \/ D,D-heptose 7-phosphate kinase\tK03272 gmhC; D-beta-D-heptose 7-phosphate kinase \/ D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]"
				},
				{
					"name":"CUP3940_1071 waaD; ADP-L-glycero-D-mannoheptose-6-epimerase\tK03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]"
				},
				{
					"name":"CUP3940_0022 galU; UTP--glucose-1-phosphate uridylyltransferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]"
				},
				{
					"name":"CUP3940_1442 dTDP-4-dehydrorhamnose 3,5-epimerase\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]"
				},
				{
					"name":"CUP3940_1446 dTDP-4-dehydrorhamnose 3,5-epimerase\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]"
				},
				{
					"name":"CUP3940_1441 GDP-L-fucose synthetase\tK02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]"
				},
				{
					"name":"CUP3940_1443 putative GDP-fucose synthase\tK02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]"
				},
				{
					"name":"CUP3940_1444 putative GDP-fucose synthase\tK02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]"
				},
				{
					"name":"CUP3940_1447 aminotransferase, DegT\/DnrJ\/EryC1\/StrS family\tK21131 colD; GDP-4-dehydro-6-deoxy-alpha-D-mannose 3-dehydratase [EC:4.2.1.168]"
				},
				{
					"name":"CUP3940_1436 GDP-mannose 4,6-dehydratase\tK15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]"
				}
				]
			},
			{
				"name":"00510 N-Glycan biosynthesis"
			},
			{
				"name":"00513 Various types of N-glycan biosynthesis"
			},
			{
				"name":"00512 Mucin type O-glycan biosynthesis"
			},
			{
				"name":"00515 Mannose type O-glycan biosynthesis"
			},
			{
				"name":"00514 Other types of O-glycan biosynthesis"
			},
			{
				"name":"00532 Glycosaminoglycan biosynthesis - chondroitin sulfate \/ dermatan sulfate"
			},
			{
				"name":"00534 Glycosaminoglycan biosynthesis - heparan sulfate \/ heparin"
			},
			{
				"name":"00533 Glycosaminoglycan biosynthesis - keratan sulfate"
			},
			{
				"name":"00531 Glycosaminoglycan degradation"
			},
			{
				"name":"00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis"
			},
			{
				"name":"00601 Glycosphingolipid biosynthesis - lacto and neolacto series"
			},
			{
				"name":"00603 Glycosphingolipid biosynthesis - globo and isoglobo series"
			},
			{
				"name":"00604 Glycosphingolipid biosynthesis - ganglio series"
			},
			{
				"name":"00511 Other glycan degradation"
			},
			{
				"name":"00540 Lipopolysaccharide biosynthesis [PATH:cux00540]",
				"children":[
				{
					"name":"CUP3940_0216 lpxA; UDP-N-acetylglucosamine acyltransferase\tK00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]"
				},
				{
					"name":"CUP3940_1397 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase\tK02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]"
				},
				{
					"name":"CUP3940_1074 lpxD; UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase\tK02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]"
				},
				{
					"name":"CUP3940_0529 lpxH; UDP-2,3-diacylglucosamine hydrolase\tK03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]"
				},
				{
					"name":"CUP3940_0527 lpxB; lipid A disaccharide synthase\tK00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]"
				},
				{
					"name":"CUP3940_0497 lpxK; tetraacyldisaccharide 4'-kinase\tK00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]"
				},
				{
					"name":"CUP3940_0950 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase)\tK02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]"
				},
				{
					"name":"CUP3940_1145 waaM; lipid A biosynthesis lauroyl acyltransferase\tK02517 lpxL; Kdo2-lipid IVA lauroyltransferase\/acyltransferase [EC:2.3.1.241 2.3.1.-]"
				},
				{
					"name":"CUP3940_0158 eptC; phosphoethanolamine transferase\tK03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]"
				},
				{
					"name":"CUP3940_1144 waaC; heptosyltransferase I\tK02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]"
				},
				{
					"name":"CUP3940_1171 waaF; heptosyltransferase II\tK02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]"
				}
				]
			},
			{
				"name":"00542 O-Antigen repeat unit biosynthesis"
			},
			{
				"name":"00550 Peptidoglycan biosynthesis [PATH:cux00550]",
				"children":[
				{
					"name":"CUP3940_0657 murA; UDP-N-acetylglucosamine enolpyruvoyl transferase\tK00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]"
				},
				{
					"name":"CUP3940_1559 murB; UDP-N-acetylenolpyruvoylglucosamine reductase\tK00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]"
				},
				{
					"name":"CUP3940_1050 murC; UDP-N-acetylmuramate-alanine ligase\tK01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]"
				},
				{
					"name":"CUP3940_1153 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase\tK01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]"
				},
				{
					"name":"CUP3940_1407 murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase\tK01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]"
				},
				{
					"name":"CUP3940_0470 ddlA; D-alanine--D-alanine ligase\tK01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]"
				},
				{
					"name":"CUP3940_0467 murF; D-alanyl-D-alanine-adding enzyme\tK01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]"
				},
				{
					"name":"CUP3940_0768 ispU; undecaprenyl diphosphate synthetase\tK00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]"
				},
				{
					"name":"CUP3940_1632 bacA; undecaprenyl pyrophosphate phosphatase\tK06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]"
				},
				{
					"name":"CUP3940_1022 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase\tK01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]"
				},
				{
					"name":"CUP3940_0488 murG; N-acetylglucosaminyl transferase\tK02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]"
				},
				{
					"name":"CUP3940_0363 pbpA; penicillin-binding protein 1A\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]"
				},
				{
					"name":"CUP3940_0489 ftsW; cell division protein, FtsW\/RodA\/SpoVE family\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]"
				},
				{
					"name":"CUP3940_1189 rodA; rod shape-determining protein\tK05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]"
				},
				{
					"name":"CUP3940_0831 mrdA; penicillin-binding protein 2\tK05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]"
				},
				{
					"name":"CUP3940_0753 ftsI; cell division protein FtsI \/ penicillin-binding protein\tK03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]"
				}
				]
			},
			{
				"name":"00552 Teichoic acid biosynthesis [PATH:cux00552]",
				"children":[
				{
					"name":"CUP3940_1632 bacA; undecaprenyl pyrophosphate phosphatase\tK06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]"
				}
				]
			},
			{
				"name":"00571 Lipoarabinomannan (LAM) biosynthesis"
			},
			{
				"name":"00572 Arabinogalactan biosynthesis - Mycobacterium"
			},
			{
				"name":"00543 Exopolysaccharide biosynthesis"
			}
			]
		},
		{
			"name":"09108 Metabolism of cofactors and vitamins",
			"children":[
			{
				"name":"00730 Thiamine metabolism [PATH:cux00730]",
				"children":[
				{
					"name":"CUP3940_0726 thiC; HMP-P synthase\tK03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]"
				},
				{
					"name":"CUP3940_0557 thiD; hydroxymethylpyrimidine kinase \/ phosphohydroxymethylpyrimidine kinase\tK00941 thiD; hydroxymethylpyrimidine\/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]"
				},
				{
					"name":"CUP3940_0613 thiFIII; ThiS adenylyltransferase (ThiS-like domain)\tK03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]"
				},
				{
					"name":"CUP3940_0026 iscS; cysteine desulfurase\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]"
				},
				{
					"name":"CUP3940_0960 thiH; 2-iminoacetate synthase\tK03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]"
				},
				{
					"name":"CUP3940_1095 dxs; 1-deoxyxylulose-5-phosphate synthase\tK01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]"
				},
				{
					"name":"CUP3940_0976 thiG; 1-deoxy-D-xylulose 5-phosphate:thiol sulfurtransferase\tK03149 thiG; thiazole synthase [EC:2.8.1.10]"
				},
				{
					"name":"CUP3940_0556 thiE; thiamine phosphate synthase (TMP-TENI domain)\tK00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]"
				},
				{
					"name":"CUP3940_0959 thiamine phosphate synthase (TMP-TENI domain)\tK00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]"
				},
				{
					"name":"CUP3940_0090 thiL; thiamine monophosphate kinase\tK00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]"
				},
				{
					"name":"CUP3940_0844 adk; adenylate kinase\tK00939 adk; adenylate kinase [EC:2.7.4.3]"
				},
				{
					"name":"CUP3940_0970 transcriptional regulator, TenA family\tK03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]"
				}
				]
			},
			{
				"name":"00740 Riboflavin metabolism [PATH:cux00740]",
				"children":[
				{
					"name":"CUP3940_0294 ribA; GTP cyclohydrolase II\tK01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]"
				},
				{
					"name":"CUP3940_0414 ribAB; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase \/ GTP cyclohydrolase II protein\tK14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase \/ GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]"
				},
				{
					"name":"CUP3940_1505 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase \/ 5-amino-6-(5-phosphoribosylamino)uracil reductase\tK11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase \/ 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]"
				},
				{
					"name":"CUP3940_0171 ribH; 6,7-dimethyl-8-ribityllumazine synthase (riboflavin synthase, beta subunit)\tK00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]"
				},
				{
					"name":"CUP3940_0964 ribE; 6,7-dimethyl-8-ribityllumazine synthase (riboflavin synthase, alpha subunit)\tK00793 ribE; riboflavin synthase [EC:2.5.1.9]"
				},
				{
					"name":"CUP3940_0586 ribF; bifunctional riboflavin kinase \/ FMN adenylyltransferase\tK11753 ribF; riboflavin kinase \/ FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]"
				},
				{
					"name":"CUP3940_1246 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]"
				}
				]
			},
			{
				"name":"00750 Vitamin B6 metabolism [PATH:cux00750]",
				"children":[
				{
					"name":"CUP3940_1090 serC; phosphohydroxythreonine aminotransferase \/ 3-phosphoserine aminotransferase\tK00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]"
				},
				{
					"name":"CUP3940_0706 pdxA; 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent\tK00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]"
				},
				{
					"name":"CUP3940_0705 pdxJ; pyridoxine 5'-phosphate synthase\tK03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]"
				},
				{
					"name":"CUP3940_0496 thrC; threonine synthase\tK01733 thrC; threonine synthase [EC:4.2.3.1]"
				}
				]
			},
			{
				"name":"00760 Nicotinate and nicotinamide metabolism [PATH:cux00760]",
				"children":[
				{
					"name":"CUP3940_0146 pncBI; nicotinate phosphoribosyltransferase, subgroup A\tK00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]"
				},
				{
					"name":"CUP3940_0523 umpG; broad specificity 5'(3')-nucleotidase and polyphosphatase\tK03787 surE; 5'\/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]"
				},
				{
					"name":"CUP3940_1516 nadD; nicotinate-mononucleotide adenylyltransferase\tK00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]"
				},
				{
					"name":"CUP3940_0498 nadE; NAD synthetase, NH3-dependent\tK01916 nadE; NAD+ synthase [EC:6.3.1.5]"
				},
				{
					"name":"CUP3940_0433 pncC; NMN amidohydrolase\tK03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]"
				},
				{
					"name":"CUP3940_0607 npdA; NAD-dependent protein deacetylase, SIR2 family\tK12410 cobB; NAD-dependent protein deacetylase\/lipoamidase [EC:2.3.1.286 2.3.1.313]"
				},
				{
					"name":"CUP3940_0842 ppnK; inorganic polyphosphate\/ATP-NAD kinase\tK00858 ppnK; NAD+ kinase [EC:2.7.1.23]"
				}
				]
			},
			{
				"name":"00770 Pantothenate and CoA biosynthesis [PATH:cux00770]",
				"children":[
				{
					"name":"CUP3940_0757 ilvC; acetohydroxy acid isomeroreductase\tK00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]"
				},
				{
					"name":"CUP3940_0855 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase\tK00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]"
				},
				{
					"name":"CUP3940_0856 panC; pantothenate synthetase\tK01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]"
				},
				{
					"name":"CUP3940_1038 coaX; pantothenate kinase, type III\tK03525 coaX; type III pantothenate kinase [EC:2.7.1.33]"
				},
				{
					"name":"CUP3940_0765 dfp; phosphopantothenoylcysteine decarboxylase\/phosphopantothenate--cysteine ligase\tK13038 coaBC; phosphopantothenoylcysteine decarboxylase \/ phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]"
				},
				{
					"name":"CUP3940_0370 coaD; phosphopantetheine adenylyltransferase\tK00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]"
				},
				{
					"name":"CUP3940_0198 coaE; dephospho-CoA kinase\tK00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]"
				},
				{
					"name":"CUP3940_1512 acpS; holo-(acyl-carrier-protein) synthase\tK00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]"
				},
				{
					"name":"CUP3940_0205 ilvE; branched-chain amino-acid aminotransferase\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]"
				},
				{
					"name":"CUP3940_0570 panD; aspartate 1-decarboxylase\tK01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]"
				}
				]
			},
			{
				"name":"00780 Biotin metabolism [PATH:cux00780]",
				"children":[
				{
					"name":"CUP3940_0695 bioC; malonyl-[acp] methyltransferase\tK02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]"
				},
				{
					"name":"CUP3940_0968 fabF; beta-ketoacyl-[acp] synthase II (KASII)\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]"
				},
				{
					"name":"CUP3940_0189 ptmA; glucosamine-6-P synthase, glutaminase subunit PtmA\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]"
				},
				{
					"name":"CUP3940_1020 fabG; 3-oxoacyl-[acp] reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]"
				},
				{
					"name":"CUP3940_0215 fabZ; 3-hydroxyacyl-[acp] dehydratase\tK02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]"
				},
				{
					"name":"CUP3940_1520 fabI; enoyl-[acp] reductase\tK00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]"
				},
				{
					"name":"CUP3940_0694 DUF452 domain-containing protein\tK09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]"
				},
				{
					"name":"CUP3940_0693 bioF; 8-amino-7-oxononanoate synthase\tK00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]"
				},
				{
					"name":"CUP3940_0899 bioA; adenosylmethionine--8-amino-7-oxononanoate aminotransferase\tK00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]"
				},
				{
					"name":"CUP3940_0900 bioD; dethiobiotin synthetase\tK01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]"
				},
				{
					"name":"CUP3940_1560 bioB; biotin synthetase\tK01012 bioB; biotin synthase [EC:2.8.1.6]"
				},
				{
					"name":"CUP3940_1589 birA; biotin-[acetyl-CoA-carboxylase] ligase\tK03524 birA; BirA family transcriptional regulator, biotin operon repressor \/ biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]"
				}
				]
			},
			{
				"name":"00785 Lipoic acid metabolism"
			},
			{
				"name":"00790 Folate biosynthesis [PATH:cux00790]",
				"children":[
				{
					"name":"CUP3940_1354 folE; GTP cyclohydrolase I\tK01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]"
				},
				{
					"name":"CUP3940_0952 Nif3-like dinuclear metal center protein, putative GTP cyclohydrolase\tK22391 E3.5.4.16; GTP cyclohydrolase I [EC:3.5.4.16]"
				},
				{
					"name":"CUP3940_0930 folB; dihydroneopterin aldolase\tK01633 folB; 7,8-dihydroneopterin aldolase\/epimerase\/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]"
				},
				{
					"name":"CUP3940_0634 folK; 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase\tK00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]"
				},
				{
					"name":"CUP3940_0583 folP; dihydropteroate synthase\tK00796 folP; dihydropteroate synthase [EC:2.5.1.15]"
				},
				{
					"name":"CUP3940_0595 folC; bifunctional folypolyglutamate synthetase \/ dihydrofolate synthetase\tK11754 folC; dihydrofolate synthase \/ folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]"
				},
				{
					"name":"CUP3940_0294 ribA; GTP cyclohydrolase II\tK01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]"
				},
				{
					"name":"CUP3940_0414 ribAB; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase \/ GTP cyclohydrolase II protein\tK14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase \/ GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]"
				},
				{
					"name":"CUP3940_0349 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase\tK01737 queD; 6-pyruvoyltetrahydropterin\/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]"
				},
				{
					"name":"CUP3940_0348 queE; 7-carboxy-7-deazaguanine synthase\tK10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]"
				},
				{
					"name":"CUP3940_1497 queC; 7-cyano-7-deazaguanine synthase\tK06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]"
				},
				{
					"name":"CUP3940_0004 queF; 7-cyano-7-deazaguanine reductase\tK09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]"
				},
				{
					"name":"CUP3940_0347 moaA; GTP 3',8'-cyclase\tK03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]"
				},
				{
					"name":"CUP3940_0034 moaC; cyclic pyranopterin monophosphate synthase\tK03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]"
				},
				{
					"name":"CUP3940_1493 moaE; molybdopterin synthase, catalytic subunit\tK03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]"
				},
				{
					"name":"CUP3940_0815 mogA; molybdopterin adenylyltransferase\tK03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]"
				},
				{
					"name":"CUP3940_0656 moeA1; molybdopterin molybdenumtransferase\tK03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]"
				},
				{
					"name":"CUP3940_1494 moeA2; molybdopterin molybdenumtransferase\tK03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]"
				},
				{
					"name":"CUP3940_1008 mobA; molybdenum cofactor guanylyltransferase protein A\tK03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]"
				}
				]
			},
			{
				"name":"00670 One carbon pool by folate [PATH:cux00670]",
				"children":[
				{
					"name":"CUP3940_1312 folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase \/ 5,10-methylene-tetrahydrofolate cyclohydrolase\tK01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) \/ methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]"
				},
				{
					"name":"CUP3940_1046 glyA; serine hydroxymethyltransferase\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]"
				},
				{
					"name":"CUP3940_1347 purN; phosphoribosylglycinamide formyltransferase 1\tK11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]"
				},
				{
					"name":"CUP3940_0973 purH; AICAR transformylase \/ IMP cyclohydrolase\tK00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase \/ IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]"
				},
				{
					"name":"CUP3940_0249 thyX; thymidylate synthase, flavin-dependent\tK03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]"
				},
				{
					"name":"CUP3940_0817 purU; formyltetrahydrofolate deformylase\tK01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]"
				},
				{
					"name":"CUP3940_1379 fau; 5-formyltetrahydrofolate cycloligase\tK01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]"
				},
				{
					"name":"CUP3940_0054 metK; S-adenosylmethionine synthetase\tK00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]"
				}
				]
			},
			{
				"name":"00830 Retinol metabolism"
			},
			{
				"name":"00860 Porphyrin metabolism [PATH:cux00860]",
				"children":[
				{
					"name":"CUP3940_0253 gltX2; glutamyl-tRNA synthetase\tK01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]"
				},
				{
					"name":"CUP3940_0463 hemA; glutamyl-tRNA reductase\tK02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]"
				},
				{
					"name":"CUP3940_1132 hemL; glutamate-1-semialdehyde aminotransferase\tK01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]"
				},
				{
					"name":"CUP3940_0293 hemB; porphobilinogen synthase\tK01698 hemB; porphobilinogen synthase [EC:4.2.1.24]"
				},
				{
					"name":"CUP3940_0454 hemC; hydroxymethylbilane synthase\tK01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]"
				},
				{
					"name":"CUP3940_0555 hemD; uroporphyrinogen III synthase\tK01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]"
				},
				{
					"name":"CUP3940_0553 hemE; uroporphyrinogen decarboxylase\tK01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]"
				},
				{
					"name":"CUP3940_0290 hemN1; oxygen-independent coproporphyrinogen III oxidase\tK02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]"
				},
				{
					"name":"CUP3940_0924 UPF0093 domain-containing membrane protein\tK08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]"
				},
				{
					"name":"CUP3940_0366 ferrochelatase\tK01772 hemH; protoporphyrin\/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]"
				},
				{
					"name":"CUP3940_1118 chuZ; iron-responsive cellular heme oxygenase\tK07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]"
				}
				]
			},
			{
				"name":"00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cux00130]",
				"children":[
				{
					"name":"CUP3940_0344 ubiA; 4-hydroxybenzoate octaprenyltransferase\tK03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]"
				},
				{
					"name":"CUP3940_0453 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase\tK03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]"
				},
				{
					"name":"CUP3940_1246 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]"
				},
				{
					"name":"CUP3940_1092 ubiE; bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase \/ S-adenosylmethionine:2-DMK methyltransferase\tK03183 ubiE; demethylmenaquinone methyltransferase \/ 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]"
				},
				{
					"name":"CUP3940_0251 mqnA2; 6-amino-6-deoxyfutalosine synthase\tK11782 mqnA; chorismate dehydratase [EC:4.2.1.151]"
				},
				{
					"name":"CUP3940_1281 menaquinone biosynthesis protein, SCO4494 family\tK18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]"
				},
				{
					"name":"CUP3940_0632 metallo-dependent hydrolase, subgroup D\tK20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40]"
				},
				{
					"name":"CUP3940_1568 pfs; multifunctional 5'-methylthioadenosine \/ S-adenosylhomocysteine nucleosidase \/ 6-amino-6-deoxyfutalosine hydrolase\tK18284 K18284; adenosylhomocysteine\/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30]"
				},
				{
					"name":"CUP3940_1116 mqnC; dehypoxanthinylfutalosine cyclase\tK11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]"
				},
				{
					"name":"CUP3940_1557 mqnD; 1,4-dihydroxy-6-naphthoate synthase\tK11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29]"
				}
				]
			}
			]
		},
		{
			"name":"09109 Metabolism of terpenoids and polyketides",
			"children":[
			{
				"name":"00900 Terpenoid backbone biosynthesis [PATH:cux00900]",
				"children":[
				{
					"name":"CUP3940_1095 dxs; 1-deoxyxylulose-5-phosphate synthase\tK01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]"
				},
				{
					"name":"CUP3940_1004 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase\tK00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]"
				},
				{
					"name":"CUP3940_0318 ispDF; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase \/ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein\tK12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase \/ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]"
				},
				{
					"name":"CUP3940_0891 ispE; 4-diphosphocytidyl-2-C-methylerythritol kinase\tK00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]"
				},
				{
					"name":"CUP3940_1077 ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase\tK03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]"
				},
				{
					"name":"CUP3940_0980 ispH; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase\tK03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]"
				},
				{
					"name":"CUP3940_1064 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]"
				},
				{
					"name":"CUP3940_1246 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]"
				},
				{
					"name":"CUP3940_1410 ispA; geranyl diphosphate synthase \/ farnesyl diphosphate synthase\tK13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]"
				},
				{
					"name":"CUP3940_0464 ispB; octaprenyl-diphosphate synthase\tK02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]"
				},
				{
					"name":"CUP3940_0768 ispU; undecaprenyl diphosphate synthetase\tK00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]"
				}
				]
			},
			{
				"name":"00902 Monoterpenoid biosynthesis"
			},
			{
				"name":"00909 Sesquiterpenoid and triterpenoid biosynthesis"
			},
			{
				"name":"00904 Diterpenoid biosynthesis"
			},
			{
				"name":"00906 Carotenoid biosynthesis"
			},
			{
				"name":"00905 Brassinosteroid biosynthesis"
			},
			{
				"name":"00981 Insect hormone biosynthesis"
			},
			{
				"name":"00908 Zeatin biosynthesis"
			},
			{
				"name":"00903 Limonene degradation"
			},
			{
				"name":"00907 Pinene, camphor and geraniol degradation"
			},
			{
				"name":"01052 Type I polyketide structures"
			},
			{
				"name":"00522 Biosynthesis of 12-, 14- and 16-membered macrolides"
			},
			{
				"name":"01051 Biosynthesis of ansamycins",
				"children":[
				{
					"name":"CUP3940_1411 tkt; transketolase\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]"
				},
				{
					"name":"CUP3940_1439 transketolase, C-terminal subunit\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]"
				},
				{
					"name":"CUP3940_1440 transketolase, N-terminal subunit\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]"
				}
				]
			},
			{
				"name":"01059 Biosynthesis of enediyne antibiotics"
			},
			{
				"name":"01056 Biosynthesis of type II polyketide backbone"
			},
			{
				"name":"01057 Biosynthesis of type II polyketide products"
			},
			{
				"name":"00253 Tetracycline biosynthesis"
			},
			{
				"name":"00523 Polyketide sugar unit biosynthesis",
				"children":[
				{
					"name":"CUP3940_1442 dTDP-4-dehydrorhamnose 3,5-epimerase\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]"
				},
				{
					"name":"CUP3940_1446 dTDP-4-dehydrorhamnose 3,5-epimerase\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]"
				}
				]
			},
			{
				"name":"01054 Nonribosomal peptide structures"
			},
			{
				"name":"01053 Biosynthesis of siderophore group nonribosomal peptides"
			},
			{
				"name":"01055 Biosynthesis of vancomycin group antibiotics"
			}
			]
		},
		{
			"name":"09110 Biosynthesis of other secondary metabolites",
			"children":[
			{
				"name":"00940 Phenylpropanoid biosynthesis"
			},
			{
				"name":"00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis"
			},
			{
				"name":"00941 Flavonoid biosynthesis"
			},
			{
				"name":"00944 Flavone and flavonol biosynthesis"
			},
			{
				"name":"00942 Anthocyanin biosynthesis"
			},
			{
				"name":"00943 Isoflavonoid biosynthesis"
			},
			{
				"name":"00946 Degradation of flavonoids"
			},
			{
				"name":"00901 Indole alkaloid biosynthesis"
			},
			{
				"name":"00403 Indole diterpene alkaloid biosynthesis"
			},
			{
				"name":"00950 Isoquinoline alkaloid biosynthesis"
			},
			{
				"name":"00960 Tropane, piperidine and pyridine alkaloid biosynthesis"
			},
			{
				"name":"00996 Biosynthesis of various alkaloids"
			},
			{
				"name":"00232 Caffeine metabolism"
			},
			{
				"name":"00965 Betalain biosynthesis"
			},
			{
				"name":"00966 Glucosinolate biosynthesis"
			},
			{
				"name":"00402 Benzoxazinoid biosynthesis"
			},
			{
				"name":"00311 Penicillin and cephalosporin biosynthesis"
			},
			{
				"name":"00332 Carbapenem biosynthesis"
			},
			{
				"name":"00261 Monobactam biosynthesis [PATH:cux00261]",
				"children":[
				{
					"name":"CUP3940_0316 sat; sulfate adenylyltransferase\tK00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]"
				},
				{
					"name":"CUP3940_0580 lysC; aspartokinase, alpha and beta subunits\tK00928 lysC; aspartate kinase [EC:2.7.2.4]"
				},
				{
					"name":"CUP3940_0476 asd; aspartate-semialdehyde dehydrogenase\tK00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]"
				},
				{
					"name":"CUP3940_1163 dapA; 4-hydroxy-tetrahydrodipicolinate synthase\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]"
				},
				{
					"name":"CUP3940_1421 dapB; 4-hydroxy-tetrahydrodipicolinate reductase\tK00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]"
				}
				]
			},
			{
				"name":"00331 Clavulanic acid biosynthesis"
			},
			{
				"name":"00521 Streptomycin biosynthesis [PATH:cux00521]",
				"children":[
				{
					"name":"CUP3940_1514 phosphomannomutase \/ phosphoglucomutase\tK15778 pmm-pgm; phosphomannomutase \/ phosphoglucomutase [EC:5.4.2.8 5.4.2.2]"
				},
				{
					"name":"CUP3940_1442 dTDP-4-dehydrorhamnose 3,5-epimerase\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]"
				},
				{
					"name":"CUP3940_1446 dTDP-4-dehydrorhamnose 3,5-epimerase\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]"
				}
				]
			},
			{
				"name":"00524 Neomycin, kanamycin and gentamicin biosynthesis"
			},
			{
				"name":"00525 Acarbose and validamycin biosynthesis"
			},
			{
				"name":"00401 Novobiocin biosynthesis [PATH:cux00401]",
				"children":[
				{
					"name":"CUP3940_1395 tyrA; chorismate mutase \/ prephenate dehydrogenase\tK04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]"
				},
				{
					"name":"CUP3940_0642 aspB; aspartate aminotransferase, class I and II aminotransferase\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]"
				},
				{
					"name":"CUP3940_1099 hisC; histidinol-phosphate aminotransferase\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]"
				}
				]
			},
			{
				"name":"00404 Staurosporine biosynthesis"
			},
			{
				"name":"00405 Phenazine biosynthesis",
				"children":[
				{
					"name":"CUP3940_0904 trpE; anthranilate synthase component I\tK01657 trpE; anthranilate synthase component I [EC:4.1.3.27]"
				}
				]
			},
			{
				"name":"00333 Prodigiosin biosynthesis",
				"children":[
				{
					"name":"CUP3940_1569 fabD; malonyl-CoA-[acp] transacylase\tK00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]"
				},
				{
					"name":"CUP3940_0189 ptmA; glucosamine-6-P synthase, glutaminase subunit PtmA\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]"
				},
				{
					"name":"CUP3940_1020 fabG; 3-oxoacyl-[acp] reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]"
				},
				{
					"name":"CUP3940_1520 fabI; enoyl-[acp] reductase\tK00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]"
				}
				]
			},
			{
				"name":"00254 Aflatoxin biosynthesis"
			},
			{
				"name":"00975 Biosynthesis of various siderophores"
			},
			{
				"name":"00998 Biosynthesis of various antibiotics",
				"children":[
				{
					"name":"CUP3940_0969 acpP2; acyl carrier protein\tK02078 acpP; acyl carrier protein"
				}
				]
			},
			{
				"name":"00999 Biosynthesis of various plant secondary metabolites [PATH:cux00999]",
				"children":[
				{
					"name":"CUP3940_0054 metK; S-adenosylmethionine synthetase\tK00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]"
				},
				{
					"name":"CUP3940_1049 aroE; shikimate dehydrogenase\tK00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]"
				}
				]
			},
			{
				"name":"00997 Biosynthesis of various other secondary metabolites"
			}
			]
		},
		{
			"name":"09111 Xenobiotics biodegradation and metabolism",
			"children":[
			{
				"name":"00362 Benzoate degradation [PATH:cux00362]",
				"children":[
				{
					"name":"CUP3940_1464 4-hydroxy-2-oxovalerate aldolase-like protein\tK01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]"
				},
				{
					"name":"CUP3940_0211 4-oxalocrotonate tautomerase family enzyme\tK01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]"
				},
				{
					"name":"CUP3940_1418 4-oxalocrotonate tautomerase family enzyme\tK01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]"
				},
				{
					"name":"CUP3940_1064 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]"
				}
				]
			},
			{
				"name":"00627 Aminobenzoate degradation [PATH:cux00627]",
				"children":[
				{
					"name":"CUP3940_0438 carbon-nitrogen hydrolase family protein\tK01501 E3.5.5.1; nitrilase [EC:3.5.5.1]"
				},
				{
					"name":"CUP3940_1246 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]"
				}
				]
			},
			{
				"name":"00364 Fluorobenzoate degradation"
			},
			{
				"name":"00625 Chloroalkane and chloroalkene degradation"
			},
			{
				"name":"00361 Chlorocyclohexane and chlorobenzene degradation"
			},
			{
				"name":"00623 Toluene degradation"
			},
			{
				"name":"00622 Xylene degradation [PATH:cux00622]",
				"children":[
				{
					"name":"CUP3940_0211 4-oxalocrotonate tautomerase family enzyme\tK01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]"
				},
				{
					"name":"CUP3940_1418 4-oxalocrotonate tautomerase family enzyme\tK01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]"
				},
				{
					"name":"CUP3940_1464 4-hydroxy-2-oxovalerate aldolase-like protein\tK01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]"
				}
				]
			},
			{
				"name":"00633 Nitrotoluene degradation"
			},
			{
				"name":"00642 Ethylbenzene degradation"
			},
			{
				"name":"00643 Styrene degradation",
				"children":[
				{
					"name":"CUP3940_0438 carbon-nitrogen hydrolase family protein\tK01501 E3.5.5.1; nitrilase [EC:3.5.5.1]"
				}
				]
			},
			{
				"name":"00791 Atrazine degradation"
			},
			{
				"name":"00930 Caprolactam degradation"
			},
			{
				"name":"00363 Bisphenol degradation"
			},
			{
				"name":"00621 Dioxin degradation [PATH:cux00621]",
				"children":[
				{
					"name":"CUP3940_0211 4-oxalocrotonate tautomerase family enzyme\tK01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]"
				},
				{
					"name":"CUP3940_1418 4-oxalocrotonate tautomerase family enzyme\tK01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]"
				},
				{
					"name":"CUP3940_1464 4-hydroxy-2-oxovalerate aldolase-like protein\tK01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]"
				}
				]
			},
			{
				"name":"00626 Naphthalene degradation"
			},
			{
				"name":"00624 Polycyclic aromatic hydrocarbon degradation"
			},
			{
				"name":"00365 Furfural degradation"
			},
			{
				"name":"00984 Steroid degradation"
			},
			{
				"name":"00980 Metabolism of xenobiotics by cytochrome P450"
			},
			{
				"name":"00982 Drug metabolism - cytochrome P450"
			},
			{
				"name":"00983 Drug metabolism - other enzymes"
			}
			]
		},
		{
			"name":"09112 Not included in regular maps",
			"children":[
			{
				"name":"09113 Global maps only"
			}
			]
		}
		]
	},
	{
		"name":"09120 Genetic Information Processing",
		"children":[
		{
			"name":"09121 Transcription",
			"children":[
			{
				"name":"03020 RNA polymerase [PATH:cux03020]",
				"children":[
				{
					"name":"CUP3940_1294 rpoB; DNA-directed RNA polymerase, beta subunit\tK03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]"
				},
				{
					"name":"CUP3940_1293 rpoC; DNA-directed RNA polymerase, beta' subunit\tK03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]"
				},
				{
					"name":"CUP3940_1369 rpoA; DNA-directed RNA polymerase, alpha subunit\tK03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]"
				},
				{
					"name":"CUP3940_1181 rpoZ; DNA-directed RNA polymerase, omega subunit\tK03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]"
				}
				]
			},
			{
				"name":"03022 Basal transcription factors"
			},
			{
				"name":"03040 Spliceosome"
			}
			]
		},
		{
			"name":"09122 Translation",
			"children":[
			{
				"name":"03010 Ribosome [PATH:cux03010]",
				"children":[
				{
					"name":"CUP3940_0049 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA"
				},
				{
					"name":"CUP3940_0440 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA"
				},
				{
					"name":"CUP3940_0683 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA"
				},
				{
					"name":"CUP3940_0055 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA"
				},
				{
					"name":"CUP3940_0413 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA"
				},
				{
					"name":"CUP3940_1027 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA"
				},
				{
					"name":"CUP3940_0056 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA"
				},
				{
					"name":"CUP3940_0412 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA"
				},
				{
					"name":"CUP3940_1026 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA"
				},
				{
					"name":"CUP3940_0981 rpsA; 30S ribosomal protein S1\tK02945 RP-S1; small subunit ribosomal protein S1"
				},
				{
					"name":"CUP3940_1206 rpsB; 30S ribosomal protein S2\tK02967 RP-S2; small subunit ribosomal protein S2"
				},
				{
					"name":"CUP3940_1604 rpsC; 30S ribosomal protein S3\tK02982 RP-S3; small subunit ribosomal protein S3"
				},
				{
					"name":"CUP3940_1370 rpsD; 30S ribosomal protein S4\tK02986 RP-S4; small subunit ribosomal protein S4"
				},
				{
					"name":"CUP3940_1593 rpsE; 30S ribosomal protein S5\tK02988 RP-S5; small subunit ribosomal protein S5"
				},
				{
					"name":"CUP3940_0430 rpsF; 30S ribosomal protein S6\tK02990 RP-S6; small subunit ribosomal protein S6"
				},
				{
					"name":"CUP3940_1288 rpsG; 30S ribosomal protein S7\tK02992 RP-S7; small subunit ribosomal protein S7"
				},
				{
					"name":"CUP3940_1596 rpsH; 30S ribosomal protein S8\tK02994 RP-S8; small subunit ribosomal protein S8"
				},
				{
					"name":"CUP3940_0124 rpsI; 30S ribosomal protein S9\tK02996 RP-S9; small subunit ribosomal protein S9"
				},
				{
					"name":"CUP3940_1611 rpsJ; 30S ribosomal protein S10\tK02946 RP-S10; small subunit ribosomal protein S10"
				},
				{
					"name":"CUP3940_1371 rpsK; 30S ribosomal protein S11\tK02948 RP-S11; small subunit ribosomal protein S11"
				},
				{
					"name":"CUP3940_1289 rpsL; 30S ribosomal protein S12\tK02950 RP-S12; small subunit ribosomal protein S12"
				},
				{
					"name":"CUP3940_1372 rpsM; 30S ribosomal protein S13\tK02952 RP-S13; small subunit ribosomal protein S13"
				},
				{
					"name":"CUP3940_1597 rpsN; 30S ribosomal protein S14\tK02954 RP-S14; small subunit ribosomal protein S14"
				},
				{
					"name":"CUP3940_0797 rpsO; 30S ribosomal protein S15\tK02956 RP-S15; small subunit ribosomal protein S15"
				},
				{
					"name":"CUP3940_0947 rpsP; 30S ribosomal protein S16\tK02959 RP-S16; small subunit ribosomal protein S16"
				},
				{
					"name":"CUP3940_1601 rpsQ; 30S ribosomal protein S17\tK02961 RP-S17; small subunit ribosomal protein S17"
				},
				{
					"name":"CUP3940_0428 rpsR; 30S ribosomal protein S18\tK02963 RP-S18; small subunit ribosomal protein S18"
				},
				{
					"name":"CUP3940_1606 rpsS; 30S ribosomal protein S19\tK02965 RP-S19; small subunit ribosomal protein S19"
				},
				{
					"name":"CUP3940_0314 rpsT; 30S ribosomal protein S20\tK02968 RP-S20; small subunit ribosomal protein S20"
				},
				{
					"name":"CUP3940_0916 rpsU; 30S ribosomal protein S21\tK02970 RP-S21; small subunit ribosomal protein S21"
				},
				{
					"name":"CUP3940_1297 rplA; 50S ribosomal protein L1\tK02863 RP-L1; large subunit ribosomal protein L1"
				},
				{
					"name":"CUP3940_1607 rplB; 50S ribosomal protein L2\tK02886 RP-L2; large subunit ribosomal protein L2"
				},
				{
					"name":"CUP3940_1610 rplC; 50S ribosomal protein L3\tK02906 RP-L3; large subunit ribosomal protein L3"
				},
				{
					"name":"CUP3940_1609 rplD; 50S ribosomal protein L4\tK02926 RP-L4; large subunit ribosomal protein L4"
				},
				{
					"name":"CUP3940_1598 rplE; 50S ribosomal protein L5\tK02931 RP-L5; large subunit ribosomal protein L5"
				},
				{
					"name":"CUP3940_1595 rplF; 50S ribosomal protein L6\tK02933 RP-L6; large subunit ribosomal protein L6"
				},
				{
					"name":"CUP3940_1331 rplI; 50S ribosomal protein L9\tK02939 RP-L9; large subunit ribosomal protein L9"
				},
				{
					"name":"CUP3940_1296 rplJ; 50S ribosomal protein L10\tK02864 RP-L10; large subunit ribosomal protein L10"
				},
				{
					"name":"CUP3940_1298 rplK; 50S ribosomal protein L11\tK02867 RP-L11; large subunit ribosomal protein L11"
				},
				{
					"name":"CUP3940_1295 rplL; 50S ribosomal protein L7\/L12\tK02935 RP-L7; large subunit ribosomal protein L7\/L12"
				},
				{
					"name":"CUP3940_0123 rplM; 50S ribosomal protein L13\tK02871 RP-L13; large subunit ribosomal protein L13"
				},
				{
					"name":"CUP3940_1600 rplN; 50S ribosomal protein L14\tK02874 RP-L14; large subunit ribosomal protein L14"
				},
				{
					"name":"CUP3940_1592 rplO; 50S ribosomal protein L15\tK02876 RP-L15; large subunit ribosomal protein L15"
				},
				{
					"name":"CUP3940_1603 rplP; 50S ribosomal protein L16\tK02878 RP-L16; large subunit ribosomal protein L16"
				},
				{
					"name":"CUP3940_1368 rplQ; 50S ribosomal protein L17\tK02879 RP-L17; large subunit ribosomal protein L17"
				},
				{
					"name":"CUP3940_1594 rplR; 50S ribosomal protein L18\tK02881 RP-L18; large subunit ribosomal protein L18"
				},
				{
					"name":"CUP3940_0943 rplS; 50S ribosomal protein L19\tK02884 RP-L19; large subunit ribosomal protein L19"
				},
				{
					"name":"CUP3940_0030 rplT; 50S ribosomal protein L20\tK02887 RP-L20; large subunit ribosomal protein L20"
				},
				{
					"name":"CUP3940_0061 rplU; 50S ribosomal protein L21\tK02888 RP-L21; large subunit ribosomal protein L21"
				},
				{
					"name":"CUP3940_1605 rplV; 50S ribosomal protein L22\tK02890 RP-L22; large subunit ribosomal protein L22"
				},
				{
					"name":"CUP3940_1608 rplW; 50S ribosomal protein L23\tK02892 RP-L23; large subunit ribosomal protein L23"
				},
				{
					"name":"CUP3940_1599 rplX; 50S ribosomal protein L24\tK02895 RP-L24; large subunit ribosomal protein L24"
				},
				{
					"name":"CUP3940_0535 rplY; 50S ribosomal protein L25\tK02897 RP-L25; large subunit ribosomal protein L25"
				},
				{
					"name":"CUP3940_0060 rpmA; 50S ribosomal protein L27\tK02899 RP-L27; large subunit ribosomal protein L27"
				},
				{
					"name":"CUP3940_0729 rpmB; 50S ribosomal protein L28\tK02902 RP-L28; large subunit ribosomal protein L28"
				},
				{
					"name":"CUP3940_1602 rpmC; 50S ribosomal protein L29\tK02904 RP-L29; large subunit ribosomal protein L29"
				},
				{
					"name":"CUP3940_0353 rpmE; 50S ribosomal protein L31\tK02909 RP-L31; large subunit ribosomal protein L31"
				},
				{
					"name":"CUP3940_1087 rpmF; 50S ribosomal protein L32\tK02911 RP-L32; large subunit ribosomal protein L32"
				},
				{
					"name":"CUP3940_1302 rpmG; 50S ribosomal protein L33\tK02913 RP-L33; large subunit ribosomal protein L33"
				},
				{
					"name":"CUP3940_0874 rpmH; 50S ribosomal protein L34\tK02914 RP-L34; large subunit ribosomal protein L34"
				},
				{
					"name":"CUP3940_0029 rpmI; 50S ribosomal protein L35\tK02916 RP-L35; large subunit ribosomal protein L35"
				},
				{
					"name":"CUP3940_1373 rpmJ; 50S ribosomal protein L36\tK02919 RP-L36; large subunit ribosomal protein L36"
				}
				]
			},
			{
				"name":"00970 Aminoacyl-tRNA biosynthesis [PATH:cux00970]",
				"children":[
				{
					"name":"CUP3940_0050 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala"
				},
				{
					"name":"CUP3940_0441 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala"
				},
				{
					"name":"CUP3940_0682 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala"
				},
				{
					"name":"CUP3940_1503 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala"
				},
				{
					"name":"CUP3940_0660 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg"
				},
				{
					"name":"CUP3940_1285 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg"
				},
				{
					"name":"CUP3940_1526 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg"
				},
				{
					"name":"CUP3940_1527 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg"
				},
				{
					"name":"CUP3940_0940 tRNA-Asn\tK14220 tRNA-Asn; tRNA Asn"
				},
				{
					"name":"CUP3940_1316 tRNA-Asp\tK14221 tRNA-Asp; tRNA Asp"
				},
				{
					"name":"CUP3940_1320 tRNA-Asp\tK14221 tRNA-Asp; tRNA Asp"
				},
				{
					"name":"CUP3940_0078 tRNA-Cys\tK14222 tRNA-Cys; tRNA Cys"
				},
				{
					"name":"CUP3940_0415 tRNA-Gln\tK14223 tRNA-Gln; tRNA Gln"
				},
				{
					"name":"CUP3940_1318 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu"
				},
				{
					"name":"CUP3940_1484 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu"
				},
				{
					"name":"CUP3940_0076 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly"
				},
				{
					"name":"CUP3940_0654 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly"
				},
				{
					"name":"CUP3940_1305 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly"
				},
				{
					"name":"CUP3940_1525 tRNA-His\tK14226 tRNA-His; tRNA His"
				},
				{
					"name":"CUP3940_0051 tRNA-Ile\tK14227 tRNA-Ile; tRNA Ile"
				},
				{
					"name":"CUP3940_0442 tRNA-Ile\tK14227 tRNA-Ile; tRNA Ile"
				},
				{
					"name":"CUP3940_0681 tRNA-Ile\tK14227 tRNA-Ile; tRNA Ile"
				},
				{
					"name":"CUP3940_0077 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu"
				},
				{
					"name":"CUP3940_0686 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu"
				},
				{
					"name":"CUP3940_0703 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu"
				},
				{
					"name":"CUP3940_1528 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu"
				},
				{
					"name":"CUP3940_1314 tRNA-Lys\tK14229 tRNA-Lys; tRNA Lys"
				},
				{
					"name":"CUP3940_1317 tRNA-Lys\tK14229 tRNA-Lys; tRNA Lys"
				},
				{
					"name":"CUP3940_0416 tRNA-Met\tK14230 tRNA-Met; tRNA Met"
				},
				{
					"name":"CUP3940_1190 tRNA-Met\tK14230 tRNA-Met; tRNA Met"
				},
				{
					"name":"CUP3940_1476 tRNA-Met\tK14230 tRNA-Met; tRNA Met"
				},
				{
					"name":"CUP3940_0081 tRNA-Phe\tK14231 tRNA-Phe; tRNA Phe"
				},
				{
					"name":"CUP3940_1524 tRNA-Pro\tK14232 tRNA-Pro; tRNA Pro"
				},
				{
					"name":"CUP3940_0079 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser"
				},
				{
					"name":"CUP3940_1057 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser"
				},
				{
					"name":"CUP3940_1475 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser"
				},
				{
					"name":"CUP3940_1304 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr"
				},
				{
					"name":"CUP3940_1307 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr"
				},
				{
					"name":"CUP3940_1301 tRNA-Trp\tK14235 tRNA-Trp; tRNA Trp"
				},
				{
					"name":"CUP3940_1306 tRNA-Tyr\tK14236 tRNA-Tyr; tRNA Tyr"
				},
				{
					"name":"CUP3940_1315 tRNA-Val\tK14237 tRNA-Val; tRNA Val"
				},
				{
					"name":"CUP3940_1319 tRNA-Val\tK14237 tRNA-Val; tRNA Val"
				},
				{
					"name":"CUP3940_1502 tRNA-Val\tK14237 tRNA-Val; tRNA Val"
				},
				{
					"name":"CUP3940_0142 selC; tRNA-Sec\tK14238 tRNA-Sec; tRNA Sec"
				},
				{
					"name":"CUP3940_0253 gltX2; glutamyl-tRNA synthetase\tK01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]"
				},
				{
					"name":"CUP3940_0785 gltX1; glutamyl-tRNA synthetase\tK09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]"
				},
				{
					"name":"CUP3940_0435 gatA; Glu-tRNA(Gln) amidotransferase, subunit A\tK02433 gatA; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]"
				},
				{
					"name":"CUP3940_0178 gatB; Glu-tRNA(Gln) amidotransferase, subunit B\tK02434 gatB; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]"
				},
				{
					"name":"CUP3940_1042 gatC; Glu-tRNA(Gln) amidotransferase, subunit C\tK02435 gatC; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]"
				},
				{
					"name":"CUP3940_0365 alaS; alanyl-tRNA synthetase\tK01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]"
				},
				{
					"name":"CUP3940_0843 aspS; aspartyl-tRNA synthetase\tK01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]"
				},
				{
					"name":"CUP3940_0953 glyQ; glycyl-tRNA synthetase, alpha chain\tK01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]"
				},
				{
					"name":"CUP3940_0738 glyS; glycyl-tRNA synthetase, beta chain\tK01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]"
				},
				{
					"name":"CUP3940_1631 thrS; threonyl-tRNA synthetase\tK01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]"
				},
				{
					"name":"CUP3940_0244 serS; seryl-tRNA synthetase\tK01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]"
				},
				{
					"name":"CUP3940_1470 selA; selenocysteine synthase\tK01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]"
				},
				{
					"name":"CUP3940_1167 cysS; cysteinyl-tRNA synthetase\tK01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]"
				},
				{
					"name":"CUP3940_0779 metS; methionyl-tRNA synthetase\tK01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]"
				},
				{
					"name":"CUP3940_0285 formyltransferase domain-containing protein\tK00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]"
				},
				{
					"name":"CUP3940_1590 fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase\tK00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]"
				},
				{
					"name":"CUP3940_1239 valS; valyl-tRNA synthetase\tK01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]"
				},
				{
					"name":"CUP3940_0592 leuS; leucyl-tRNA synthetase\tK01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]"
				},
				{
					"name":"CUP3940_0434 ileS; isoleucyl-tRNA synthetase\tK01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]"
				},
				{
					"name":"CUP3940_1045 lysS; lysyl-tRNA synthetase\tK04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]"
				},
				{
					"name":"CUP3940_1199 argS; arginyl-tRNA synthetase\tK01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]"
				},
				{
					"name":"CUP3940_0462 proS; prolyl-tRNA synthetase\tK01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]"
				},
				{
					"name":"CUP3940_0368 hisS; histidyl-tRNA synthetase\tK01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]"
				},
				{
					"name":"CUP3940_0977 pheS; phenylalanyl-tRNA synthetase, alpha subunit\tK01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]"
				},
				{
					"name":"CUP3940_0978 pheT; phenylalanyl-tRNA synthetase, beta subunit\tK01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]"
				},
				{
					"name":"CUP3940_1179 tyrS; tyrosyl-tRNA synthetase\tK01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]"
				},
				{
					"name":"CUP3940_0243 trpS; tryptophanyl-tRNA synthetase\tK01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]"
				}
				]
			},
			{
				"name":"03013 Nucleocytoplasmic transport"
			},
			{
				"name":"03015 mRNA surveillance pathway"
			},
			{
				"name":"03008 Ribosome biogenesis in eukaryotes",
				"children":[
				{
					"name":"CUP3940_0306 rnc; ribonuclease III\tK03685 rnc; ribonuclease III [EC:3.1.26.3]"
				}
				]
			}
			]
		},
		{
			"name":"09123 Folding, sorting and degradation",
			"children":[
			{
				"name":"03060 Protein export [PATH:cux03060]",
				"children":[
				{
					"name":"CUP3940_1591 secY; preprotein translocase SecYEG, SecY subunit\tK03076 secY; preprotein translocase subunit SecY"
				},
				{
					"name":"CUP3940_1300 secE; preprotein translocase SecYEG, SecE subunit\tK03073 secE; preprotein translocase subunit SecE"
				},
				{
					"name":"CUP3940_0151 secG; preprotein translocase SecYEG, SecG subunit\tK03075 secG; preprotein translocase subunit SecG"
				},
				{
					"name":"CUP3940_0590 secD; protein-export membrane protein SecD\tK03072 secD; preprotein translocase subunit SecD"
				},
				{
					"name":"CUP3940_0591 secF; protein-export membrane protein SecF\tK03074 secF; preprotein translocase subunit SecF"
				},
				{
					"name":"CUP3940_0589 yajC; preprotein translocase subunit YajC\tK03210 yajC; preprotein translocase subunit YajC"
				},
				{
					"name":"CUP3940_0871 oxaA; membrane protein insertase, YidC\/Oxa1 family\tK03217 yidC; YidC\/Oxa1 family membrane protein insertase"
				},
				{
					"name":"CUP3940_0549 secA; preprotein translocase, SecA subunit\tK03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]"
				},
				{
					"name":"CUP3940_0948 ffh; signal recognition particle protein\tK03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]"
				},
				{
					"name":"CUP3940_1498 srpB; bacterial signal recognition particle RNA (4.5S RNA)\tK01983 ffs; signal recognition particle 4.5S RNA"
				},
				{
					"name":"CUP3940_1381 ftsY; cell division protein FtsY\tK03110 ftsY; fused signal recognition particle receptor"
				},
				{
					"name":"CUP3940_1200 twin arginine translocation system, TatA\/E family protein\tK03116 tatA; sec-independent protein translocase protein TatA"
				},
				{
					"name":"CUP3940_0857 tatB; twin arginine translocation system, TatB protein\tK03117 tatB; sec-independent protein translocase protein TatB"
				},
				{
					"name":"CUP3940_0858 tatC; twin arginine translocation system, TatC protein\tK03118 tatC; sec-independent protein translocase protein TatC"
				},
				{
					"name":"CUP3940_1313 lepB; leader peptidase (signal peptidase I)\tK03100 lepB; signal peptidase I [EC:3.4.21.89]"
				},
				{
					"name":"CUP3940_0925 lspA; prolipoprotein signal peptidase II\tK03101 lspA; signal peptidase II [EC:3.4.23.36]"
				}
				]
			},
			{
				"name":"04141 Protein processing in endoplasmic reticulum",
				"children":[
				{
					"name":"CUP3940_0272 htpG; chaperone protein HtpG\tK04079 HSP90A; molecular chaperone HtpG"
				}
				]
			},
			{
				"name":"04130 SNARE interactions in vesicular transport"
			},
			{
				"name":"04120 Ubiquitin mediated proteolysis"
			},
			{
				"name":"04122 Sulfur relay system [PATH:cux04122]",
				"children":[
				{
					"name":"CUP3940_0026 iscS; cysteine desulfurase\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]"
				},
				{
					"name":"CUP3940_0301 tRNA U34 2-thiouridine synthase, MnmA family\tK00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]"
				},
				{
					"name":"CUP3940_0621 mnmA; tRNA U34 2-thiouridylase\tK00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]"
				},
				{
					"name":"CUP3940_1493 moaE; molybdopterin synthase, catalytic subunit\tK03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]"
				},
				{
					"name":"CUP3940_0347 moaA; GTP 3',8'-cyclase\tK03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]"
				},
				{
					"name":"CUP3940_1492 moaD; molybdopterin synthase, sulfur carrier subunit\tK03636 moaD; sulfur-carrier protein"
				},
				{
					"name":"CUP3940_0034 moaC; cyclic pyranopterin monophosphate synthase\tK03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]"
				},
				{
					"name":"CUP3940_0815 mogA; molybdopterin adenylyltransferase\tK03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]"
				},
				{
					"name":"CUP3940_0612 thiS; thiamine biosynthesis protein\tK03154 thiS; sulfur carrier protein"
				},
				{
					"name":"CUP3940_0613 thiFIII; ThiS adenylyltransferase (ThiS-like domain)\tK03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]"
				}
				]
			},
			{
				"name":"03050 Proteasome"
			},
			{
				"name":"03018 RNA degradation [PATH:cux03018]",
				"children":[
				{
					"name":"CUP3940_0579 rppH; RNA pyrophosphohydrolase\tK08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]"
				},
				{
					"name":"CUP3940_1555 eno; enolase\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]"
				},
				{
					"name":"CUP3940_1011 pnp; polynucleotide phosphorylase\tK00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]"
				},
				{
					"name":"CUP3940_0756 rnr; ribonuclease R\tK12573 rnr; ribonuclease R [EC:3.1.13.1]"
				},
				{
					"name":"CUP3940_1066 rho; transcription termination factor\tK03628 rho; transcription termination factor Rho"
				},
				{
					"name":"CUP3940_1378 ribonuclease Y\tK18682 rny; ribonucrease Y [EC:3.1.-.-]"
				},
				{
					"name":"CUP3940_1616 mRNA degradation ribonuclease J1\/J2 (metallo-beta-lactamase superfamily)\tK12574 rnj; ribonuclease J [EC:3.1.-.-]"
				},
				{
					"name":"CUP3940_0506 dnaK; DnaK system heat shock chaperone\tK04043 dnaK; molecular chaperone DnaK"
				},
				{
					"name":"CUP3940_0961 groEL; 60 kD chaperonin (cpn60)\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]"
				},
				{
					"name":"CUP3940_1156 ppk; polyphosphate kinase 1\tK00937 ppk1; polyphosphate kinase [EC:2.7.4.1]"
				},
				{
					"name":"CUP3940_0256 ppk2; polyphosphate kinase 2\tK22468 ppk2; polyphosphate kinase [EC:2.7.4.34]"
				}
				]
			}
			]
		},
		{
			"name":"09124 Replication and repair",
			"children":[
			{
				"name":"03030 DNA replication [PATH:cux03030]",
				"children":[
				{
					"name":"CUP3940_0727 dnaQ; DNA polymerase III, epsilon subunit\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0040 dnaE; DNA polymerase III, alpha subunit\tK02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_1065 dnaX; DNA polymerase III, gamma and tau subunits\tK02343 dnaX; DNA polymerase III subunit gamma\/tau [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0582 holB; DNA polymerase III, delta prime subunit\tK02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0755 holA; DNA polymerase III, delta subunit\tK02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0002 dnaN; DNA polymerase III, beta subunit\tK02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_1075 dnaB; replicative DNA helicase\tK02314 dnaB; replicative DNA helicase [EC:5.6.2.3]"
				},
				{
					"name":"CUP3940_0303 dnaG; DNA primase\tK02316 dnaG; DNA primase [EC:2.7.7.101]"
				},
				{
					"name":"CUP3940_0383 DNA primase\tK02316 dnaG; DNA primase [EC:2.7.7.101]"
				},
				{
					"name":"CUP3940_0429 ssb; single-stranded DNA binding protein\tK03111 ssb; single-strand DNA-binding protein"
				},
				{
					"name":"CUP3940_0305 rnhA; ribonuclease HI\tK03469 rnhA; ribonuclease HI [EC:3.1.26.4]"
				},
				{
					"name":"CUP3940_0135 rnhB; ribonuclease HII\tK03470 rnhB; ribonuclease HII [EC:3.1.26.4]"
				},
				{
					"name":"CUP3940_0584 ligA; DNA ligase, NAD-dependent\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]"
				}
				]
			},
			{
				"name":"03410 Base excision repair [PATH:cux03410]",
				"children":[
				{
					"name":"CUP3940_0265 nth; endonuclease III\tK10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]"
				},
				{
					"name":"CUP3940_0069 ung; uracil-DNA glycosylase, family 1\tK03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]"
				},
				{
					"name":"CUP3940_0074 mutY; A\/G-specific adenine glycosylase\tK03575 mutY; A\/G-specific adenine glycosylase [EC:3.2.2.31]"
				},
				{
					"name":"CUP3940_0876 uracil-DNA glycosylase, family 4\tK21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]"
				},
				{
					"name":"CUP3940_0159 xth; exodeoxyribonuclease III (exonuclease III)\tK01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]"
				},
				{
					"name":"CUP3940_0246 recJ; single-stranded DNA-specific exonuclease\tK07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]"
				},
				{
					"name":"CUP3940_0584 ligA; DNA ligase, NAD-dependent\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]"
				}
				]
			},
			{
				"name":"03420 Nucleotide excision repair [PATH:cux03420]",
				"children":[
				{
					"name":"CUP3940_0598 mfd; transcription-repair coupling factor\tK03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]"
				},
				{
					"name":"CUP3940_0445 uvrA; UvrABC nucleotide excision repair complex, subunit UvrA\tK03701 uvrA; excinuclease ABC subunit A"
				},
				{
					"name":"CUP3940_0514 uvrB; UvrABC nucleotide excision repair complex, subunit UvrB\tK03702 uvrB; excinuclease ABC subunit B"
				},
				{
					"name":"CUP3940_1255 uvrC; UvrABC nucleotide excision repair complex, subunit UvrC\tK03703 uvrC; excinuclease ABC subunit C"
				},
				{
					"name":"CUP3940_0894 UvrD\/REP family helicase\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]"
				},
				{
					"name":"CUP3940_1237 rep; ATP-dependent DNA helicase\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]"
				},
				{
					"name":"CUP3940_0584 ligA; DNA ligase, NAD-dependent\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]"
				}
				]
			},
			{
				"name":"03430 Mismatch repair [PATH:cux03430]",
				"children":[
				{
					"name":"CUP3940_0883 mutS2; DNA mismatch binding protein, MutS2 family\tK07456 mutS2; DNA mismatch repair protein MutS2"
				},
				{
					"name":"CUP3940_0894 UvrD\/REP family helicase\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]"
				},
				{
					"name":"CUP3940_1237 rep; ATP-dependent DNA helicase\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]"
				},
				{
					"name":"CUP3940_1091 xseA; exodeoxyribonuclease VII, large subunit\tK03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]"
				},
				{
					"name":"CUP3940_0437 xseB; exodeoxyribonuclease VII, small subunit\tK03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]"
				},
				{
					"name":"CUP3940_0246 recJ; single-stranded DNA-specific exonuclease\tK07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]"
				},
				{
					"name":"CUP3940_0429 ssb; single-stranded DNA binding protein\tK03111 ssb; single-strand DNA-binding protein"
				},
				{
					"name":"CUP3940_0040 dnaE; DNA polymerase III, alpha subunit\tK02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0002 dnaN; DNA polymerase III, beta subunit\tK02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_1065 dnaX; DNA polymerase III, gamma and tau subunits\tK02343 dnaX; DNA polymerase III subunit gamma\/tau [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0755 holA; DNA polymerase III, delta subunit\tK02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0582 holB; DNA polymerase III, delta prime subunit\tK02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0727 dnaQ; DNA polymerase III, epsilon subunit\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0584 ligA; DNA ligase, NAD-dependent\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]"
				},
				{
					"name":"CUP3940_0716 type IIP restriction\/modification system, cytosine-specific DNA methyltransferase\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1016 type IIP restriction\/modification system, DNA methyltransferase\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1626 type IIS restriction\/modification system, DNA methyltransferase\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1646 type IIS restriction\/modification system, DNA methyltransferase\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]"
				}
				]
			},
			{
				"name":"03440 Homologous recombination [PATH:cux03440]",
				"children":[
				{
					"name":"CUP3940_0246 recJ; single-stranded DNA-specific exonuclease\tK07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]"
				},
				{
					"name":"CUP3940_0429 ssb; single-stranded DNA binding protein\tK03111 ssb; single-strand DNA-binding protein"
				},
				{
					"name":"CUP3940_0457 recR; recombination protein\tK06187 recR; recombination protein RecR"
				},
				{
					"name":"CUP3940_1556 recA; recombinase\tK03553 recA; recombination protein RecA"
				},
				{
					"name":"CUP3940_0471 ruvA; RuvABC resolvasome, subunit RuvA\tK03550 ruvA; holliday junction DNA helicase RuvA"
				},
				{
					"name":"CUP3940_0474 ruvB; RuvABC resolvasome, subunit RuvB\tK03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]"
				},
				{
					"name":"CUP3940_1648 ruvC; RuvABC resolvasome, subunit RuvC\tK01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]"
				},
				{
					"name":"CUP3940_1114 recG; ATP-dependent DNA helicase\tK03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]"
				},
				{
					"name":"CUP3940_0040 dnaE; DNA polymerase III, alpha subunit\tK02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0002 dnaN; DNA polymerase III, beta subunit\tK02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_1065 dnaX; DNA polymerase III, gamma and tau subunits\tK02343 dnaX; DNA polymerase III subunit gamma\/tau [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0755 holA; DNA polymerase III, delta subunit\tK02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0582 holB; DNA polymerase III, delta prime subunit\tK02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0727 dnaQ; DNA polymerase III, epsilon subunit\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0510 priA; primosomal protein N'\tK04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]"
				}
				]
			},
			{
				"name":"03450 Non-homologous end-joining"
			},
			{
				"name":"03460 Fanconi anemia pathway"
			}
			]
		},
		{
			"name":"09126 Chromosome",
			"children":[
			{
				"name":"03082 ATP-dependent chromatin remodeling"
			},
			{
				"name":"03083 Polycomb repressive complex"
			}
			]
		},
		{
			"name":"09125 Information processing in viruses",
			"children":[
			{
				"name":"03230 Viral genome structure"
			},
			{
				"name":"03240 Viral replication"
			},
			{
				"name":"03250 Viral life cycle - HIV-1"
			},
			{
				"name":"03260 Virion - Human immunodeficiency virus"
			},
			{
				"name":"03271 Virion - Rotavirus"
			},
			{
				"name":"03262 Virion - Coronavirus"
			},
			{
				"name":"03261 Virion - Influenza virus"
			},
			{
				"name":"03263 Virion - Enterovirus"
			},
			{
				"name":"03264 Virion - Flavivirus and Alphavirus"
			},
			{
				"name":"03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus"
			},
			{
				"name":"03273 Virion - Lassa virus and SFTS virus"
			},
			{
				"name":"03272 Virion - Hepatitis viruses"
			},
			{
				"name":"03266 Virion - Herpesvirus"
			},
			{
				"name":"03268 Virion - Orthopoxvirus"
			},
			{
				"name":"03267 Virion - Adenovirus"
			},
			{
				"name":"03259 Virion - Bacteriophages T4 and T7"
			},
			{
				"name":"03258 Virion - Bacteriophage lambda"
			}
			]
		}
		]
	},
	{
		"name":"09130 Environmental Information Processing",
		"children":[
		{
			"name":"09131 Membrane transport",
			"children":[
			{
				"name":"02010 ABC transporters [PATH:cux02010]",
				"children":[
				{
					"name":"CUP3940_0195 ABC transporter, periplasmic substrate-binding protein\tK05772 tupA; tungstate transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_1266 tupA; tungsten ABC transporter TupABC, periplasmic tungstate-binding protein\tK05772 tupA; tungstate transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_1267 tupB; tungsten ABC transporter TupABC, permease protein\tK05773 tupB; tungstate transport system permease protein"
				},
				{
					"name":"CUP3940_1268 tupC; tungsten ABC transporter TupABC, ATP-binding protein\tK06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]"
				},
				{
					"name":"CUP3940_0696 modA; molybdenum ABC transporter ModABC, periplasmic molybdate-binding protein\tK02020 modA; molybdate transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_0698 modB; molybdenum ABC transporter ModABC, permease protein\tK02018 modB; molybdate transport system permease protein"
				},
				{
					"name":"CUP3940_0699 modC; molybdenum ABC transporter ModABC, ATP-binding protein\tK02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]"
				},
				{
					"name":"CUP3940_1276 mlaC; lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaC\tK07323 mlaC; phospholipid transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_1414 mlaD; lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaD\tK02067 mlaD; phospholipid\/cholesterol\/gamma-HCH transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_1412 mlaE; lipid asymmetry ABC transporter MlaABCDEF, permease component MlaE\tK02066 mlaE; phospholipid\/cholesterol\/gamma-HCH transport system permease protein"
				},
				{
					"name":"CUP3940_1413 mlaF; lipid asymmetry ABC transporter MlaABCDEF, ATPase component MlaF\tK02065 mlaF; phospholipid\/cholesterol\/gamma-HCH transport system ATP-binding protein"
				},
				{
					"name":"CUP3940_0717 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein\tK02040 pstS; phosphate transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_0718 pstC; phosphate ABC transporter, permease protein\tK02037 pstC; phosphate transport system permease protein"
				},
				{
					"name":"CUP3940_0719 pstA; phosphate ABC transporter, permease protein\tK02038 pstA; phosphate transport system permease protein"
				},
				{
					"name":"CUP3940_0720 pstB; phosphate ABC transporter, ATP-binding protein\tK02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]"
				},
				{
					"name":"CUP3940_0502 amino acid ABC transporter, periplasmic amino acid-binding protein\tK10039 peb1A; aspartate\/glutamate\/glutamine transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_0500 amino acid ABC transporter, permease protein\tK10040 peb1B; aspartate\/glutamate\/glutamine transport system permease protein"
				},
				{
					"name":"CUP3940_0501 amino acid ABC transporter, permease protein\tK10040 peb1B; aspartate\/glutamate\/glutamine transport system permease protein"
				},
				{
					"name":"CUP3940_0503 amino acid ABC transporter, ATP-binding protein\tK10041 peb1C; aspartate\/glutamate\/glutamine transport system ATP-binding protein [EC:7.4.2.1]"
				},
				{
					"name":"CUP3940_0229 cjaC; amino acid ABC transporter, periplasmic arginine\/lysine\/histidine-binding lipoprotein\tK23059 artP; arginine\/lysine\/histidine transporter system substrate-binding protein"
				},
				{
					"name":"CUP3940_0854 amino acid ABC transporter, permease protein\tK17077 artQ; arginine\/lysine\/histidine transport system permease protein"
				},
				{
					"name":"CUP3940_0853 amino acid ABC transporter, ATP-binding protein\tK23060 artR; arginine\/lysine\/histidine transport system ATP-binding protein [EC:7.4.2.1]"
				},
				{
					"name":"CUP3940_0480 livJ; high-affinity branched-chain amino acid transporter, periplasmic Leu\/Ile\/Val-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_0481 livK; high-affinity branched-chain amino acid ABC transporter, periplasmic Leu\/Ile\/Val-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_0482 livH; high-affinity branched-chain amino acid ABC transporter, permease protein\tK01997 livH; branched-chain amino acid transport system permease protein"
				},
				{
					"name":"CUP3940_0483 livM; high-affinity branched-chain amino acid ABC transporter, permease protein\tK01998 livM; branched-chain amino acid transport system permease protein"
				},
				{
					"name":"CUP3940_0484 livG; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein\tK01995 livG; branched-chain amino acid transport system ATP-binding protein"
				},
				{
					"name":"CUP3940_0485 livF; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein\tK01996 livF; branched-chain amino acid transport system ATP-binding protein"
				},
				{
					"name":"CUP3940_1242 metQ1; DL-methionine ABC transporter MetINQ, substrate-binding protein\tK02073 metQ; D-methionine transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_1243 metQ2; DL-methionine ABC transporter MetINQ, substrate-binding protein\tK02073 metQ; D-methionine transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_1244 metQ3; DL-methionine ABC transporter MetINQ, substrate-binding protein\tK02073 metQ; D-methionine transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_1241 metI; DL-methionine ABC transporter MetINQ, permease protein\tK02072 metI; D-methionine transport system permease protein"
				},
				{
					"name":"CUP3940_1240 metN; DL-methionine ABC transporter MetINQ, ATP-binding protein\tK02071 metN; D-methionine transport system ATP-binding protein"
				},
				{
					"name":"CUP3940_0237 znuA; zinc ABC transporter, periplasmic substrate-binding protein\tK09815 znuA; zinc transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_0235 znuB; zinc ABC transporter, integral membrane protein\tK09816 znuB; zinc transport system permease protein"
				},
				{
					"name":"CUP3940_0236 znuC; zinc ABC transporter, ATP-binding protein\tK09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]"
				},
				{
					"name":"CUP3940_0663 kpsE; capsular polysaccharide export system, inner membrane protein\tK10107 kpsE; capsular polysaccharide transport system permease protein"
				},
				{
					"name":"CUP3940_0665 kpsM; capsular polysaccharide export system, permease protein\tK09688 kpsM; capsular polysaccharide transport system permease protein"
				},
				{
					"name":"CUP3940_0664 kpsT; capsular polysaccharide export system, ATP-binding cassette component\tK09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]"
				},
				{
					"name":"CUP3940_0552 lolC; lipoprotein releasing system, transmembrane protein, LolC\/E family\tK09808 lolC_E_F; lipoprotein-releasing system permease protein"
				},
				{
					"name":"CUP3940_1204 ABC transporter, ATP-binding protein\tK09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]"
				},
				{
					"name":"CUP3940_0770 lptF; lipooligosaccharide transport system, ABC transporter permease component LptF\tK07091 lptF; lipopolysaccharide export system permease protein"
				},
				{
					"name":"CUP3940_0537 lptG; lipooligosaccharide transport system, ABC transporter permease component LptG\tK11720 lptG; lipopolysaccharide export system permease protein"
				},
				{
					"name":"CUP3940_0848 lptB; lipooligosaccharide transport system, ABC transporter ATP-binding component LptB\tK06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]"
				},
				{
					"name":"CUP3940_1184 ftsX; cell division protein FtsX\tK09811 ftsX; cell division transport system permease protein"
				},
				{
					"name":"CUP3940_1185 ftsE; cell division ATP-binding protein FtsE\tK09812 ftsE; cell division transport system ATP-binding protein"
				},
				{
					"name":"CUP3940_1166 msbA; lipid A export ATP-binding\/permease protein\tK11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]"
				},
				{
					"name":"CUP3940_0572 macB; macrolide-specific efflux protein, ATP-binding\/permease protein MacB\tK05685 macB; macrolide transport system ATP-binding\/permease protein [EC:7.6.2.-]"
				}
				]
			},
			{
				"name":"02060 Phosphotransferase system (PTS)"
			},
			{
				"name":"03070 Bacterial secretion system [PATH:cux03070]",
				"children":[
				{
					"name":"CUP3940_0606 cmeD; multidrug efflux system CmeDEF, outer membrane component CmeD\tK12340 tolC; outer membrane protein"
				},
				{
					"name":"CUP3940_0098 ctsD; transformation system protein CtsD\tK02453 gspD; general secretion pathway protein D"
				},
				{
					"name":"CUP3940_0094 ctsF; transformation system, membrane protein CtsF\tK02455 gspF; general secretion pathway protein F"
				},
				{
					"name":"CUP3940_0095 ctsE; transformation system, ATPase CtsE\tK02454 gspE; general secretion pathway protein E [EC:7.4.2.8]"
				},
				{
					"name":"CUP3940_0590 secD; protein-export membrane protein SecD\tK03072 secD; preprotein translocase subunit SecD"
				},
				{
					"name":"CUP3940_0591 secF; protein-export membrane protein SecF\tK03074 secF; preprotein translocase subunit SecF"
				},
				{
					"name":"CUP3940_1300 secE; preprotein translocase SecYEG, SecE subunit\tK03073 secE; preprotein translocase subunit SecE"
				},
				{
					"name":"CUP3940_0151 secG; preprotein translocase SecYEG, SecG subunit\tK03075 secG; preprotein translocase subunit SecG"
				},
				{
					"name":"CUP3940_1591 secY; preprotein translocase SecYEG, SecY subunit\tK03076 secY; preprotein translocase subunit SecY"
				},
				{
					"name":"CUP3940_0589 yajC; preprotein translocase subunit YajC\tK03210 yajC; preprotein translocase subunit YajC"
				},
				{
					"name":"CUP3940_0871 oxaA; membrane protein insertase, YidC\/Oxa1 family\tK03217 yidC; YidC\/Oxa1 family membrane protein insertase"
				},
				{
					"name":"CUP3940_0549 secA; preprotein translocase, SecA subunit\tK03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]"
				},
				{
					"name":"CUP3940_1381 ftsY; cell division protein FtsY\tK03110 ftsY; fused signal recognition particle receptor"
				},
				{
					"name":"CUP3940_0948 ffh; signal recognition particle protein\tK03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]"
				},
				{
					"name":"CUP3940_1200 twin arginine translocation system, TatA\/E family protein\tK03116 tatA; sec-independent protein translocase protein TatA"
				},
				{
					"name":"CUP3940_0857 tatB; twin arginine translocation system, TatB protein\tK03117 tatB; sec-independent protein translocase protein TatB"
				},
				{
					"name":"CUP3940_0858 tatC; twin arginine translocation system, TatC protein\tK03118 tatC; sec-independent protein translocase protein TatC"
				}
				]
			}
			]
		},
		{
			"name":"09132 Signal transduction",
			"children":[
			{
				"name":"02020 Two-component system [PATH:cux02020]",
				"children":[
				{
					"name":"CUP3940_0722 two-component system sensor histidine kinase\tK07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]"
				},
				{
					"name":"CUP3940_0721 two-component system response regulator\tK07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP"
				},
				{
					"name":"CUP3940_0717 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein\tK02040 pstS; phosphate transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_0744 htrA; periplasmic heat shock serine protease HtrA, Do family\tK04771 degP; serine protease Do [EC:3.4.21.107]"
				},
				{
					"name":"CUP3940_0093 flaB; flagellin\tK02406 fliC; flagellin"
				},
				{
					"name":"CUP3940_0652 flaC; flagellar secreted protein\tK02406 fliC; flagellin"
				},
				{
					"name":"CUP3940_1474 flaA; flagellin\tK02406 fliC; flagellin"
				},
				{
					"name":"CUP3940_0638 fliA; RNA polymerase sigma28 factor\tK02405 fliA; RNA polymerase sigma factor FliA"
				},
				{
					"name":"CUP3940_1231 motA; flagellar motor stator protein\tK02556 motA; chemotaxis protein MotA"
				},
				{
					"name":"CUP3940_0001 dnaA; chromosomal replication initiator protein\tK02313 dnaA; chromosomal replication initiator protein"
				},
				{
					"name":"CUP3940_0516 anaerobic C4-dicarboxylate transporter, DcuA\/DcuB family\tK07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB"
				},
				{
					"name":"CUP3940_0892 csrA; carbon storage regulator\tK03563 csrA; carbon storage regulator"
				},
				{
					"name":"CUP3940_1282 GlnD domain-containing protein\tK00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]"
				},
				{
					"name":"CUP3940_0958 glnA; glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]"
				},
				{
					"name":"CUP3940_1061 short-chain fatty acid transporter\tK02106 atoE; short-chain fatty acids transporter"
				},
				{
					"name":"CUP3940_1064 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]"
				},
				{
					"name":"CUP3940_1214 dctA; C4-dicarboxylate transport protein\tK11103 dctA; aerobic C4-dicarboxylate transport protein"
				},
				{
					"name":"CUP3940_0849 rpoN; RNA polymerase sigma54 factor\tK03092 rpoN; RNA polymerase sigma-54 factor"
				},
				{
					"name":"CUP3940_1173 hydC; [Ni-Fe] hydrogenase, cytochrome b subunit\tK03620 hyaC; Ni\/Fe-hydrogenase 1 B-type cytochrome subunit"
				},
				{
					"name":"CUP3940_0504 cheR; MCP protein methyltransferase\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]"
				},
				{
					"name":"CUP3940_0037 Cache sensor-containing MCP-domain signal transduction protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"CUP3940_0048 4HB sensor-containing MCP-domain signal transduction protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"CUP3940_0238 Cache sensor-containing MCP-domain signal transduction protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"CUP3940_0972 MCP-domain signal transduction protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"CUP3940_1346 MCP-domain signal transduction protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"CUP3940_1382 Cache sensor-containing MCP-domain signal transduction protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"CUP3940_0532 cheW; purine-binding chemotaxis protein CheW\tK03408 cheW; purine-binding chemotaxis protein CheW"
				},
				{
					"name":"CUP3940_0531 cheA; chemotaxis sensory histidine kinase\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]"
				},
				{
					"name":"CUP3940_1110 cheY; chemotaxis regulatory protein\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY"
				},
				{
					"name":"CUP3940_0505 cheB'; MCP protein-glutamate methylesterase\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]"
				},
				{
					"name":"CUP3940_0530 cheV; chemotaxis signal transduction protein CheV\tK03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV"
				},
				{
					"name":"CUP3940_1209 petA; ubiquinol cytochrome c oxidoreductase PetABC, [2Fe-2S] subunit\tK00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]"
				},
				{
					"name":"CUP3940_1208 petB; ubiquinol cytochrome c oxidoreductase PetABC, cytochrome b subunit\tK00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit"
				},
				{
					"name":"CUP3940_1207 petC; ubiquinol cytochrome c oxidoreductase PetABC, membrane-bound cytochrome c subunit\tK00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit"
				},
				{
					"name":"CUP3940_1069 cccA; periplasmic monoheme cytochrome c553\tK08738 CYC; cytochrome c"
				},
				{
					"name":"CUP3940_0112 ccoN; cytochrome c oxidase CcoNOPQ, cbb3-type, subunit I\tK00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]"
				},
				{
					"name":"CUP3940_0113 ccoO; cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit II\tK00405 ccoO; cytochrome c oxidase cbb3-type subunit II"
				},
				{
					"name":"CUP3940_0114 ccoQ; cytochrome c oxidase CcoNOPQ, cbb3-type, subunit IV\tK00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV"
				},
				{
					"name":"CUP3940_0115 ccoP; cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit III\tK00406 ccoP; cytochrome c oxidase cbb3-type subunit III"
				},
				{
					"name":"CUP3940_0102 cioA; cyanide-insensitive cytochrome oxidase CioAB, subunit I\tK00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]"
				},
				{
					"name":"CUP3940_0101 cioB; cyanide-insensitive cytochrome oxidase CioAB, subunit II\tK00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]"
				},
				{
					"name":"CUP3940_0606 cmeD; multidrug efflux system CmeDEF, outer membrane component CmeD\tK12340 tolC; outer membrane protein"
				},
				{
					"name":"CUP3940_1157 low molecular weight protein-tyrosine-phosphatase\tK25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]"
				}
				]
			},
			{
				"name":"04010 MAPK signaling pathway"
			},
			{
				"name":"04013 MAPK signaling pathway - fly"
			},
			{
				"name":"04016 MAPK signaling pathway - plant"
			},
			{
				"name":"04011 MAPK signaling pathway - yeast"
			},
			{
				"name":"04012 ErbB signaling pathway"
			},
			{
				"name":"04014 Ras signaling pathway"
			},
			{
				"name":"04015 Rap1 signaling pathway"
			},
			{
				"name":"04310 Wnt signaling pathway"
			},
			{
				"name":"04330 Notch signaling pathway"
			},
			{
				"name":"04340 Hedgehog signaling pathway"
			},
			{
				"name":"04341 Hedgehog signaling pathway - fly"
			},
			{
				"name":"04350 TGF-beta signaling pathway"
			},
			{
				"name":"04390 Hippo signaling pathway"
			},
			{
				"name":"04391 Hippo signaling pathway - fly"
			},
			{
				"name":"04392 Hippo signaling pathway - multiple species"
			},
			{
				"name":"04370 VEGF signaling pathway"
			},
			{
				"name":"04371 Apelin signaling pathway"
			},
			{
				"name":"04630 JAK-STAT signaling pathway"
			},
			{
				"name":"04064 NF-kappa B signaling pathway"
			},
			{
				"name":"04668 TNF signaling pathway"
			},
			{
				"name":"04066 HIF-1 signaling pathway"
			},
			{
				"name":"04068 FoxO signaling pathway"
			},
			{
				"name":"04020 Calcium signaling pathway"
			},
			{
				"name":"04070 Phosphatidylinositol signaling system"
			},
			{
				"name":"04072 Phospholipase D signaling pathway"
			},
			{
				"name":"04071 Sphingolipid signaling pathway"
			},
			{
				"name":"04024 cAMP signaling pathway"
			},
			{
				"name":"04022 cGMP-PKG signaling pathway"
			},
			{
				"name":"04151 PI3K-Akt signaling pathway"
			},
			{
				"name":"04152 AMPK signaling pathway"
			},
			{
				"name":"04150 mTOR signaling pathway"
			},
			{
				"name":"04075 Plant hormone signal transduction"
			}
			]
		},
		{
			"name":"09133 Signaling molecules and interaction",
			"children":[
			{
				"name":"04080 Neuroactive ligand-receptor interaction"
			},
			{
				"name":"04082 Neuroactive ligand signaling"
			},
			{
				"name":"04081 Hormone signaling"
			},
			{
				"name":"04060 Cytokine-cytokine receptor interaction"
			},
			{
				"name":"04061 Viral protein interaction with cytokine and cytokine receptor"
			},
			{
				"name":"04512 ECM-receptor interaction"
			},
			{
				"name":"04514 Cell adhesion molecule (CAM) interaction"
			},
			{
				"name":"04517 IgSF CAM signaling"
			},
			{
				"name":"04518 Integrin signaling"
			},
			{
				"name":"04519 Cadherin signaling"
			}
			]
		}
		]
	},
	{
		"name":"09140 Cellular Processes",
		"children":[
		{
			"name":"09141 Transport and catabolism",
			"children":[
			{
				"name":"04144 Endocytosis"
			},
			{
				"name":"04145 Phagocytosis"
			},
			{
				"name":"04142 Lysosome biogenesis"
			},
			{
				"name":"04146 Peroxisome [PATH:cux04146]",
				"children":[
				{
					"name":"CUP3940_0788 icd; isocitrate dehydrogenase, monomeric\tK00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]"
				},
				{
					"name":"CUP3940_1356 sodB; superoxide dismutase (Fe)\tK04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]"
				}
				]
			},
			{
				"name":"04149 Peroxisome - yeast"
			},
			{
				"name":"04140 Autophagy - animal"
			},
			{
				"name":"04138 Autophagy - yeast"
			},
			{
				"name":"04136 Autophagy - other"
			},
			{
				"name":"04137 Mitophagy - animal"
			},
			{
				"name":"04139 Mitophagy - yeast"
			},
			{
				"name":"04148 Efferocytosis",
				"children":[
				{
					"name":"CUP3940_1209 petA; ubiquinol cytochrome c oxidoreductase PetABC, [2Fe-2S] subunit\tK00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]"
				}
				]
			}
			]
		},
		{
			"name":"09143 Cell growth and death",
			"children":[
			{
				"name":"04110 Cell cycle"
			},
			{
				"name":"04111 Cell cycle - yeast"
			},
			{
				"name":"04112 Cell cycle - Caulobacter"
			},
			{
				"name":"04113 Meiosis - yeast"
			},
			{
				"name":"04114 Oocyte meiosis"
			},
			{
				"name":"04210 Apoptosis"
			},
			{
				"name":"04214 Apoptosis - fly"
			},
			{
				"name":"04215 Apoptosis - multiple species"
			},
			{
				"name":"04216 Ferroptosis"
			},
			{
				"name":"04217 Necroptosis"
			},
			{
				"name":"04115 p53 signaling pathway"
			},
			{
				"name":"04218 Cellular senescence"
			},
			{
				"name":"04156 Integrated stress response (ISR) signaling pathway [PATH:cux04156]",
				"children":[
				{
					"name":"CUP3940_0272 htpG; chaperone protein HtpG\tK04079 HSP90A; molecular chaperone HtpG"
				},
				{
					"name":"CUP3940_0416 tRNA-Met\tK14230 tRNA-Met; tRNA Met"
				},
				{
					"name":"CUP3940_1190 tRNA-Met\tK14230 tRNA-Met; tRNA Met"
				},
				{
					"name":"CUP3940_1476 tRNA-Met\tK14230 tRNA-Met; tRNA Met"
				},
				{
					"name":"CUP3940_0506 dnaK; DnaK system heat shock chaperone\tK04043 dnaK; molecular chaperone DnaK"
				},
				{
					"name":"CUP3940_0961 groEL; 60 kD chaperonin (cpn60)\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]"
				}
				]
			}
			]
		},
		{
			"name":"09144 Cellular community - eukaryotes",
			"children":[
			{
				"name":"04510 Focal adhesion"
			},
			{
				"name":"04520 Adherens junction"
			},
			{
				"name":"04530 Tight junction"
			},
			{
				"name":"04540 Gap junction"
			},
			{
				"name":"04550 Signaling pathways regulating pluripotency of stem cells"
			}
			]
		},
		{
			"name":"09145 Cellular community - prokaryotes",
			"children":[
			{
				"name":"02024 Quorum sensing [PATH:cux02024]",
				"children":[
				{
					"name":"CUP3940_0904 trpE; anthranilate synthase component I\tK01657 trpE; anthranilate synthase component I [EC:4.1.3.27]"
				},
				{
					"name":"CUP3940_0942 aroG; 2-dehydro-3-deoxyphosphoheptonate aldolase (DAHP synthetase, class II)\tK01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]"
				},
				{
					"name":"CUP3940_0480 livJ; high-affinity branched-chain amino acid transporter, periplasmic Leu\/Ile\/Val-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_0481 livK; high-affinity branched-chain amino acid ABC transporter, periplasmic Leu\/Ile\/Val-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_0482 livH; high-affinity branched-chain amino acid ABC transporter, permease protein\tK01997 livH; branched-chain amino acid transport system permease protein"
				},
				{
					"name":"CUP3940_0483 livM; high-affinity branched-chain amino acid ABC transporter, permease protein\tK01998 livM; branched-chain amino acid transport system permease protein"
				},
				{
					"name":"CUP3940_0484 livG; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein\tK01995 livG; branched-chain amino acid transport system ATP-binding protein"
				},
				{
					"name":"CUP3940_0485 livF; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein\tK01996 livF; branched-chain amino acid transport system ATP-binding protein"
				},
				{
					"name":"CUP3940_0294 ribA; GTP cyclohydrolase II\tK01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]"
				},
				{
					"name":"CUP3940_1505 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase \/ 5-amino-6-(5-phosphoribosylamino)uracil reductase\tK11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase \/ 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]"
				},
				{
					"name":"CUP3940_0921 cmeC; multidrug efflux system CmeABC, outer membrane lipoprotein CmeC\tK18139 oprM; outer membrane protein, multidrug efflux system"
				},
				{
					"name":"CUP3940_0871 oxaA; membrane protein insertase, YidC\/Oxa1 family\tK03217 yidC; YidC\/Oxa1 family membrane protein insertase"
				},
				{
					"name":"CUP3940_1300 secE; preprotein translocase SecYEG, SecE subunit\tK03073 secE; preprotein translocase subunit SecE"
				},
				{
					"name":"CUP3940_0151 secG; preprotein translocase SecYEG, SecG subunit\tK03075 secG; preprotein translocase subunit SecG"
				},
				{
					"name":"CUP3940_1591 secY; preprotein translocase SecYEG, SecY subunit\tK03076 secY; preprotein translocase subunit SecY"
				},
				{
					"name":"CUP3940_0589 yajC; preprotein translocase subunit YajC\tK03210 yajC; preprotein translocase subunit YajC"
				},
				{
					"name":"CUP3940_0549 secA; preprotein translocase, SecA subunit\tK03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]"
				},
				{
					"name":"CUP3940_1381 ftsY; cell division protein FtsY\tK03110 ftsY; fused signal recognition particle receptor"
				},
				{
					"name":"CUP3940_0948 ffh; signal recognition particle protein\tK03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]"
				}
				]
			},
			{
				"name":"05111 Biofilm formation - Vibrio cholerae"
			},
			{
				"name":"02025 Biofilm formation - Pseudomonas aeruginosa"
			},
			{
				"name":"02026 Biofilm formation - Escherichia coli"
			}
			]
		},
		{
			"name":"09142 Cell motility",
			"children":[
			{
				"name":"02030 Bacterial chemotaxis [PATH:cux02030]",
				"children":[
				{
					"name":"CUP3940_0037 Cache sensor-containing MCP-domain signal transduction protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"CUP3940_0048 4HB sensor-containing MCP-domain signal transduction protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"CUP3940_0238 Cache sensor-containing MCP-domain signal transduction protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"CUP3940_0972 MCP-domain signal transduction protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"CUP3940_1346 MCP-domain signal transduction protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"CUP3940_1382 Cache sensor-containing MCP-domain signal transduction protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"CUP3940_0531 cheA; chemotaxis sensory histidine kinase\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]"
				},
				{
					"name":"CUP3940_0532 cheW; purine-binding chemotaxis protein CheW\tK03408 cheW; purine-binding chemotaxis protein CheW"
				},
				{
					"name":"CUP3940_1110 cheY; chemotaxis regulatory protein\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY"
				},
				{
					"name":"CUP3940_0505 cheB'; MCP protein-glutamate methylesterase\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]"
				},
				{
					"name":"CUP3940_0530 cheV; chemotaxis signal transduction protein CheV\tK03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV"
				},
				{
					"name":"CUP3940_0504 cheR; MCP protein methyltransferase\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]"
				},
				{
					"name":"CUP3940_1097 fliG; flagellar motor switch C-ring protein FliG\tK02410 fliG; flagellar motor switch protein FliG"
				},
				{
					"name":"CUP3940_0639 fliM; flagellar motor switch C-ring protein FliM\tK02416 fliM; flagellar motor switch protein FliM"
				},
				{
					"name":"CUP3940_0640 fliY; flagellar motor switch C-ring protein FliY\tK02417 fliN; flagellar motor switch protein FliN"
				},
				{
					"name":"CUP3940_0910 fliN; flagellar motor switch C-ring protein FliN\tK02417 fliN; flagellar motor switch protein FliN"
				},
				{
					"name":"CUP3940_1231 motA; flagellar motor stator protein\tK02556 motA; chemotaxis protein MotA"
				},
				{
					"name":"CUP3940_1232 motB; flagellar motor stator protein\tK02557 motB; chemotaxis protein MotB"
				}
				]
			},
			{
				"name":"02040 Flagellar assembly [PATH:cux02040]",
				"children":[
				{
					"name":"CUP3940_0752 fliE; flagellar proximal rod protein FliE\tK02408 fliE; flagellar hook-basal body complex protein FliE"
				},
				{
					"name":"CUP3940_1098 fliF; flagellar inner membrane MS-ring protein FliF\tK02409 fliF; flagellar M-ring protein FliF"
				},
				{
					"name":"CUP3940_1097 fliG; flagellar motor switch C-ring protein FliG\tK02410 fliG; flagellar motor switch protein FliG"
				},
				{
					"name":"CUP3940_1096 fliH; flagellar export apparatus, cytoplasmic ATPase complex, FliH component\tK02411 fliH; flagellar assembly protein FliH"
				},
				{
					"name":"CUP3940_1388 fliI; flagellar export apparatus, cytoplasmic ATPase complex, FliI component\tK02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]"
				},
				{
					"name":"CUP3940_0131 fliKII; flagellar hook-length control protein FliK\tK02414 fliK; flagellar hook-length control protein FliK"
				},
				{
					"name":"CUP3940_1513 fliL; flagellar motor-associated protein FliL\tK02415 fliL; flagellar protein FliL"
				},
				{
					"name":"CUP3940_0639 fliM; flagellar motor switch C-ring protein FliM\tK02416 fliM; flagellar motor switch protein FliM"
				},
				{
					"name":"CUP3940_0640 fliY; flagellar motor switch C-ring protein FliY\tK02417 fliN; flagellar motor switch protein FliN"
				},
				{
					"name":"CUP3940_0910 fliN; flagellar motor switch C-ring protein FliN\tK02417 fliN; flagellar motor switch protein FliN"
				},
				{
					"name":"CUP3940_0763 fliP; flagellar export apparatus, transmembrane gate complex, FliP component\tK02419 fliP; flagellar biosynthesis protein FliP"
				},
				{
					"name":"CUP3940_1558 fliQ; flagellar export apparatus, transmembrane gate complex, FliQ component\tK02420 fliQ; flagellar biosynthesis protein FliQ"
				},
				{
					"name":"CUP3940_1203 fliR; flagellar export apparatus, transmembrane gate complex, FliR component\tK02421 fliR; flagellar biosynthesis protein FliR"
				},
				{
					"name":"CUP3940_0799 flhA; flagellar export apparatus, transmembrane gate complex, FlhA component\tK02400 flhA; flagellar biosynthesis protein FlhA"
				},
				{
					"name":"CUP3940_1081 flhB; flagellar export apparatus, transmembrane gate complex, FlhB component\tK02401 flhB; flagellar biosynthesis protein FlhB"
				},
				{
					"name":"CUP3940_1245 flgA; flagellar P-ring chaperone FlgA\tK02386 flgA; flagellar basal body P-ring formation protein FlgA"
				},
				{
					"name":"CUP3940_0750 flgB; flagellar proximal rod protein FlgB\tK02387 flgB; flagellar basal-body rod protein FlgB"
				},
				{
					"name":"CUP3940_0751 flgC; flagellar proximal rod protein FlgC\tK02388 flgC; flagellar basal-body rod protein FlgC"
				},
				{
					"name":"CUP3940_0132 flgD; flagellar hook assembly protein\tK02389 flgD; flagellar basal-body rod modification protein FlgD"
				},
				{
					"name":"CUP3940_0133 flgE; flagellar hook protein\tK02390 flgE; flagellar hook protein FlgE"
				},
				{
					"name":"CUP3940_1635 flgE2; flagellar hook protein, epsilonproteobacterial variant\tK02390 flgE; flagellar hook protein FlgE"
				},
				{
					"name":"CUP3940_0234 flgF; flagellar distal rod protein FlgF\tK02391 flgF; flagellar basal-body rod protein FlgF"
				},
				{
					"name":"CUP3940_0233 flgG; flagellar distal rod protein FlgG\tK02392 flgG; flagellar basal-body rod protein FlgG"
				},
				{
					"name":"CUP3940_0850 flgH; flagellar outer membrane L-ring protein FlgH\tK02393 flgH; flagellar L-ring protein FlgH"
				},
				{
					"name":"CUP3940_1483 flgI; flagellar peptidoglycan-localized P-ring protein FlgI\tK02394 flgI; flagellar P-ring protein FlgI"
				},
				{
					"name":"CUP3940_1482 putative flagellar rod assembly protein FlgJ\tK02395 flgJ; peptidoglycan hydrolase FlgJ"
				},
				{
					"name":"CUP3940_1479 flgK; proximal flagellar hook-filament junction protein\tK02396 flgK; flagellar hook-associated protein 1"
				},
				{
					"name":"CUP3940_0685 flgL; distal flagellar hook-filament junction protein\tK02397 flgL; flagellar hook-associated protein 3 FlgL"
				},
				{
					"name":"CUP3940_1149 flgP; basal disk protein FlgP\tK09860 flgP; outer membrane protein FlgP"
				},
				{
					"name":"CUP3940_1148 flgQ; putative basal disk-associated protein FlgQ\tK24346 flgQ; flagellar motility protein FlgQ"
				},
				{
					"name":"CUP3940_0093 flaB; flagellin\tK02406 fliC; flagellin"
				},
				{
					"name":"CUP3940_0652 flaC; flagellar secreted protein\tK02406 fliC; flagellin"
				},
				{
					"name":"CUP3940_1474 flaA; flagellin\tK02406 fliC; flagellin"
				},
				{
					"name":"CUP3940_0451 fliD; flagellar filament cap protein\tK02407 fliD; flagellar hook-associated protein 2"
				},
				{
					"name":"CUP3940_0450 fliS; flagellar chaperone FliS\tK02422 fliS; flagellar secretion chaperone FliS"
				},
				{
					"name":"CUP3940_1231 motA; flagellar motor stator protein\tK02556 motA; chemotaxis protein MotA"
				},
				{
					"name":"CUP3940_1232 motB; flagellar motor stator protein\tK02557 motB; chemotaxis protein MotB"
				},
				{
					"name":"CUP3940_1234 rpoD; RNA polymerase sigma70 factor\tK03086 rpoD; RNA polymerase primary sigma factor"
				},
				{
					"name":"CUP3940_0849 rpoN; RNA polymerase sigma54 factor\tK03092 rpoN; RNA polymerase sigma-54 factor"
				},
				{
					"name":"CUP3940_0638 fliA; RNA polymerase sigma28 factor\tK02405 fliA; RNA polymerase sigma factor FliA"
				}
				]
			},
			{
				"name":"04814 Motor proteins"
			},
			{
				"name":"04820 Cytoskeleton in muscle cells",
				"children":[
				{
					"name":"CUP3940_1555 eno; enolase\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]"
				}
				]
			},
			{
				"name":"04810 Regulation of actin cytoskeleton"
			}
			]
		}
		]
	},
	{
		"name":"09150 Organismal Systems",
		"children":[
		{
			"name":"09151 Immune system",
			"children":[
			{
				"name":"04640 Hematopoietic cell lineage"
			},
			{
				"name":"04610 Complement and coagulation cascades"
			},
			{
				"name":"04611 Platelet activation"
			},
			{
				"name":"04613 Neutrophil extracellular trap formation"
			},
			{
				"name":"04620 Toll-like receptor signaling pathway"
			},
			{
				"name":"04624 Toll and Imd signaling pathway"
			},
			{
				"name":"04621 NOD-like receptor signaling pathway"
			},
			{
				"name":"04622 RIG-I-like receptor signaling pathway"
			},
			{
				"name":"04623 Cytosolic DNA-sensing pathway"
			},
			{
				"name":"04625 C-type lectin receptor signaling pathway"
			},
			{
				"name":"04650 Natural killer cell mediated cytotoxicity"
			},
			{
				"name":"04612 Antigen processing and presentation"
			},
			{
				"name":"04660 T cell receptor signaling pathway"
			},
			{
				"name":"04658 Th1 and Th2 cell differentiation"
			},
			{
				"name":"04659 Th17 cell differentiation"
			},
			{
				"name":"04657 IL-17 signaling pathway"
			},
			{
				"name":"04662 B cell receptor signaling pathway"
			},
			{
				"name":"04664 Fc epsilon RI signaling pathway"
			},
			{
				"name":"04666 Fc gamma R-mediated phagosome formation"
			},
			{
				"name":"04670 Leukocyte transendothelial migration"
			},
			{
				"name":"04672 Intestinal immune network for IgA production"
			},
			{
				"name":"04062 Chemokine signaling pathway"
			}
			]
		},
		{
			"name":"09152 Endocrine system",
			"children":[
			{
				"name":"04911 Insulin secretion"
			},
			{
				"name":"04910 Insulin signaling pathway"
			},
			{
				"name":"04922 Glucagon signaling pathway"
			},
			{
				"name":"04923 Regulation of lipolysis in adipocytes"
			},
			{
				"name":"04920 Adipocytokine signaling pathway"
			},
			{
				"name":"03320 PPAR signaling pathway"
			},
			{
				"name":"04929 GnRH secretion"
			},
			{
				"name":"04912 GnRH signaling pathway"
			},
			{
				"name":"04913 Ovarian steroidogenesis"
			},
			{
				"name":"04915 Estrogen signaling pathway"
			},
			{
				"name":"04914 Progesterone-mediated oocyte maturation"
			},
			{
				"name":"04917 Prolactin signaling pathway"
			},
			{
				"name":"04921 Oxytocin signaling pathway"
			},
			{
				"name":"04926 Relaxin signaling pathway"
			},
			{
				"name":"04935 Growth hormone synthesis, secretion and action"
			},
			{
				"name":"04918 Thyroid hormone synthesis"
			},
			{
				"name":"04919 Thyroid hormone signaling pathway"
			},
			{
				"name":"04928 Parathyroid hormone synthesis, secretion and action"
			},
			{
				"name":"04916 Melanogenesis"
			},
			{
				"name":"04924 Renin secretion"
			},
			{
				"name":"04614 Renin-angiotensin system"
			},
			{
				"name":"04925 Aldosterone synthesis and secretion"
			},
			{
				"name":"04927 Cortisol synthesis and secretion"
			}
			]
		},
		{
			"name":"09153 Circulatory system",
			"children":[
			{
				"name":"04260 Cardiac muscle contraction"
			},
			{
				"name":"04261 Adrenergic signaling in cardiomyocytes"
			},
			{
				"name":"04270 Vascular smooth muscle contraction"
			}
			]
		},
		{
			"name":"09154 Digestive system",
			"children":[
			{
				"name":"04970 Salivary secretion"
			},
			{
				"name":"04971 Gastric acid secretion"
			},
			{
				"name":"04972 Pancreatic secretion"
			},
			{
				"name":"04976 Bile secretion"
			},
			{
				"name":"04973 Carbohydrate digestion and absorption"
			},
			{
				"name":"04974 Protein digestion and absorption"
			},
			{
				"name":"04975 Fat digestion and absorption"
			},
			{
				"name":"04979 Cholesterol metabolism"
			},
			{
				"name":"04977 Vitamin digestion and absorption"
			},
			{
				"name":"04981 Folate transport and metabolism [PATH:cux04981]",
				"children":[
				{
					"name":"CUP3940_1379 fau; 5-formyltetrahydrofolate cycloligase\tK01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]"
				},
				{
					"name":"CUP3940_1046 glyA; serine hydroxymethyltransferase\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]"
				}
				]
			},
			{
				"name":"04980 Cobalamin transport and metabolism"
			},
			{
				"name":"04978 Mineral absorption"
			}
			]
		},
		{
			"name":"09155 Excretory system",
			"children":[
			{
				"name":"04962 Vasopressin-regulated water reabsorption"
			},
			{
				"name":"04960 Aldosterone-regulated sodium reabsorption"
			},
			{
				"name":"04961 Endocrine and other factor-regulated calcium reabsorption"
			},
			{
				"name":"04964 Proximal tubule bicarbonate reclamation"
			},
			{
				"name":"04966 Collecting duct acid secretion"
			}
			]
		},
		{
			"name":"09156 Nervous system",
			"children":[
			{
				"name":"04724 Glutamatergic synapse"
			},
			{
				"name":"04727 GABAergic synapse"
			},
			{
				"name":"04725 Cholinergic synapse"
			},
			{
				"name":"04728 Dopaminergic synapse"
			},
			{
				"name":"04726 Serotonergic synapse"
			},
			{
				"name":"04720 Long-term potentiation"
			},
			{
				"name":"04730 Long-term depression"
			},
			{
				"name":"04723 Retrograde endocannabinoid signaling"
			},
			{
				"name":"04721 Synaptic vesicle cycle"
			},
			{
				"name":"04722 Neurotrophin signaling pathway"
			}
			]
		},
		{
			"name":"09157 Sensory system",
			"children":[
			{
				"name":"04744 Phototransduction"
			},
			{
				"name":"04745 Phototransduction - fly"
			},
			{
				"name":"04740 Olfactory transduction"
			},
			{
				"name":"04742 Taste transduction"
			},
			{
				"name":"04750 Inflammatory mediator regulation of TRP channels"
			}
			]
		},
		{
			"name":"09158 Development and regeneration",
			"children":[
			{
				"name":"04320 Dorso-ventral axis formation"
			},
			{
				"name":"04360 Axon guidance"
			},
			{
				"name":"04361 Axon regeneration"
			},
			{
				"name":"04380 Osteoclast differentiation"
			},
			{
				"name":"04382 Cornified envelope formation"
			}
			]
		},
		{
			"name":"09149 Aging",
			"children":[
			{
				"name":"04211 Longevity regulating pathway"
			},
			{
				"name":"04212 Longevity regulating pathway - worm"
			},
			{
				"name":"04213 Longevity regulating pathway - multiple species"
			}
			]
		},
		{
			"name":"09159 Environmental adaptation",
			"children":[
			{
				"name":"04710 Circadian rhythm"
			},
			{
				"name":"04713 Circadian entrainment"
			},
			{
				"name":"04711 Circadian rhythm - fly"
			},
			{
				"name":"04712 Circadian rhythm - plant"
			},
			{
				"name":"04714 Thermogenesis"
			},
			{
				"name":"04626 Plant-pathogen interaction"
			}
			]
		}
		]
	},
	{
		"name":"09160 Human Diseases",
		"children":[
		{
			"name":"09161 Cancer: overview",
			"children":[
			{
				"name":"05200 Pathways in cancer"
			},
			{
				"name":"05202 Transcriptional misregulation in cancer"
			},
			{
				"name":"05206 MicroRNAs in cancer"
			},
			{
				"name":"05205 Proteoglycans in cancer"
			},
			{
				"name":"05204 Chemical carcinogenesis - DNA adducts"
			},
			{
				"name":"05207 Chemical carcinogenesis - receptor activation"
			},
			{
				"name":"05208 Chemical carcinogenesis - reactive oxygen species"
			},
			{
				"name":"05203 Viral carcinogenesis"
			},
			{
				"name":"05230 Central carbon metabolism in cancer"
			},
			{
				"name":"05231 Choline metabolism in cancer"
			},
			{
				"name":"05235 PD-L1 expression and PD-1 checkpoint pathway in cancer"
			}
			]
		},
		{
			"name":"09162 Cancer: specific types",
			"children":[
			{
				"name":"05210 Colorectal cancer"
			},
			{
				"name":"05212 Pancreatic cancer"
			},
			{
				"name":"05225 Hepatocellular carcinoma"
			},
			{
				"name":"05226 Gastric cancer"
			},
			{
				"name":"05214 Glioma"
			},
			{
				"name":"05216 Thyroid cancer"
			},
			{
				"name":"05221 Acute myeloid leukemia"
			},
			{
				"name":"05220 Chronic myeloid leukemia"
			},
			{
				"name":"05217 Basal cell carcinoma"
			},
			{
				"name":"05218 Melanoma"
			},
			{
				"name":"05211 Renal cell carcinoma"
			},
			{
				"name":"05219 Bladder cancer"
			},
			{
				"name":"05215 Prostate cancer"
			},
			{
				"name":"05213 Endometrial cancer"
			},
			{
				"name":"05224 Breast cancer"
			},
			{
				"name":"05222 Small cell lung cancer"
			},
			{
				"name":"05223 Non-small cell lung cancer"
			}
			]
		},
		{
			"name":"09172 Infectious disease: viral",
			"children":[
			{
				"name":"05166 Human T-cell leukemia virus 1 infection"
			},
			{
				"name":"05170 Human immunodeficiency virus 1 infection"
			},
			{
				"name":"05161 Hepatitis B"
			},
			{
				"name":"05160 Hepatitis C"
			},
			{
				"name":"05171 Coronavirus disease"
			},
			{
				"name":"05164 Influenza A"
			},
			{
				"name":"05162 Measles"
			},
			{
				"name":"05168 Herpes simplex virus 1 infection"
			},
			{
				"name":"05163 Human cytomegalovirus infection"
			},
			{
				"name":"05167 Kaposi sarcoma-associated herpesvirus infection"
			},
			{
				"name":"05169 Epstein-Barr virus infection"
			},
			{
				"name":"05165 Human papillomavirus infection"
			}
			]
		},
		{
			"name":"09171 Infectious disease: bacterial",
			"children":[
			{
				"name":"05110 Vibrio cholerae infection"
			},
			{
				"name":"05120 Epithelial cell signaling in Helicobacter pylori infection"
			},
			{
				"name":"05130 Pathogenic Escherichia coli infection"
			},
			{
				"name":"05132 Salmonella infection"
			},
			{
				"name":"05131 Shigellosis"
			},
			{
				"name":"05135 Yersinia infection"
			},
			{
				"name":"05133 Pertussis"
			},
			{
				"name":"05134 Legionellosis"
			},
			{
				"name":"05150 Staphylococcus aureus infection"
			},
			{
				"name":"05152 Tuberculosis"
			},
			{
				"name":"05100 Bacterial invasion of epithelial cells"
			}
			]
		},
		{
			"name":"09174 Infectious disease: parasitic",
			"children":[
			{
				"name":"05146 Amoebiasis"
			},
			{
				"name":"05144 Malaria"
			},
			{
				"name":"05145 Toxoplasmosis"
			},
			{
				"name":"05140 Leishmaniasis"
			},
			{
				"name":"05142 Chagas disease"
			},
			{
				"name":"05143 African trypanosomiasis"
			}
			]
		},
		{
			"name":"09163 Immune disease",
			"children":[
			{
				"name":"05310 Asthma"
			},
			{
				"name":"05322 Systemic lupus erythematosus"
			},
			{
				"name":"05323 Rheumatoid arthritis"
			},
			{
				"name":"05320 Autoimmune thyroid disease"
			},
			{
				"name":"05321 Inflammatory bowel disease"
			},
			{
				"name":"05330 Allograft rejection"
			},
			{
				"name":"05332 Graft-versus-host disease"
			},
			{
				"name":"05340 Primary immunodeficiency"
			}
			]
		},
		{
			"name":"09164 Neurodegenerative disease",
			"children":[
			{
				"name":"05010 Alzheimer disease"
			},
			{
				"name":"05012 Parkinson disease"
			},
			{
				"name":"05014 Amyotrophic lateral sclerosis"
			},
			{
				"name":"05016 Huntington disease"
			},
			{
				"name":"05017 Spinocerebellar ataxia"
			},
			{
				"name":"05020 Prion disease"
			},
			{
				"name":"05022 Pathways of neurodegeneration - multiple diseases"
			}
			]
		},
		{
			"name":"09165 Substance dependence",
			"children":[
			{
				"name":"05030 Cocaine addiction"
			},
			{
				"name":"05031 Amphetamine addiction"
			},
			{
				"name":"05032 Morphine addiction"
			},
			{
				"name":"05033 Nicotine addiction"
			},
			{
				"name":"05034 Alcoholism"
			}
			]
		},
		{
			"name":"09166 Cardiovascular disease",
			"children":[
			{
				"name":"05417 Lipid and atherosclerosis"
			},
			{
				"name":"05418 Fluid shear stress and atherosclerosis"
			},
			{
				"name":"05410 Hypertrophic cardiomyopathy"
			},
			{
				"name":"05412 Arrhythmogenic right ventricular cardiomyopathy"
			},
			{
				"name":"05414 Dilated cardiomyopathy"
			},
			{
				"name":"05415 Diabetic cardiomyopathy"
			},
			{
				"name":"05416 Viral myocarditis"
			}
			]
		},
		{
			"name":"09167 Endocrine and metabolic disease",
			"children":[
			{
				"name":"04930 Type II diabetes mellitus"
			},
			{
				"name":"04940 Type I diabetes mellitus"
			},
			{
				"name":"04950 Maturity onset diabetes of the young"
			},
			{
				"name":"04936 Alcoholic liver disease"
			},
			{
				"name":"04932 Non-alcoholic fatty liver disease"
			},
			{
				"name":"04931 Insulin resistance"
			},
			{
				"name":"04933 AGE-RAGE signaling pathway in diabetic complications"
			},
			{
				"name":"04934 Cushing syndrome"
			}
			]
		},
		{
			"name":"09175 Drug resistance: antimicrobial",
			"children":[
			{
				"name":"01501 beta-Lactam resistance [PATH:cux01501]",
				"children":[
				{
					"name":"CUP3940_0605 cmeE; multidrug efflux system CmeDEF, membrane fusion component CmeE\tK03585 acrA; membrane fusion protein, multidrug efflux system"
				},
				{
					"name":"CUP3940_0919 cmeA; multidrug efflux system CmeABC, periplasmic fusion protein CmeA\tK03585 acrA; membrane fusion protein, multidrug efflux system"
				},
				{
					"name":"CUP3940_0604 cmeF; multidrug efflux system CmeDEF, integral membrane component CmeF\tK18138 acrB; multidrug efflux pump"
				},
				{
					"name":"CUP3940_0920 cmeB; multidrug efflux system CmeABC, inner membrane drug transporter CmeB\tK18138 acrB; multidrug efflux pump"
				},
				{
					"name":"CUP3940_0921 cmeC; multidrug efflux system CmeABC, outer membrane lipoprotein CmeC\tK18139 oprM; outer membrane protein, multidrug efflux system"
				},
				{
					"name":"CUP3940_0606 cmeD; multidrug efflux system CmeDEF, outer membrane component CmeD\tK12340 tolC; outer membrane protein"
				},
				{
					"name":"CUP3940_0363 pbpA; penicillin-binding protein 1A\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]"
				},
				{
					"name":"CUP3940_0831 mrdA; penicillin-binding protein 2\tK05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]"
				},
				{
					"name":"CUP3940_0753 ftsI; cell division protein FtsI \/ penicillin-binding protein\tK03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]"
				}
				]
			},
			{
				"name":"01502 Vancomycin resistance [PATH:cux01502]",
				"children":[
				{
					"name":"CUP3940_0470 ddlA; D-alanine--D-alanine ligase\tK01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]"
				},
				{
					"name":"CUP3940_0987 alr; alanine racemase\tK01775 alr; alanine racemase [EC:5.1.1.1]"
				},
				{
					"name":"CUP3940_0467 murF; D-alanyl-D-alanine-adding enzyme\tK01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]"
				},
				{
					"name":"CUP3940_1022 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase\tK01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]"
				},
				{
					"name":"CUP3940_0488 murG; N-acetylglucosaminyl transferase\tK02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]"
				}
				]
			},
			{
				"name":"01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cux01503]",
				"children":[
				{
					"name":"CUP3940_0158 eptC; phosphoethanolamine transferase\tK03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]"
				},
				{
					"name":"CUP3940_1177 amiA; N-acetylmuramoyl-L-alanine amidase\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]"
				},
				{
					"name":"CUP3940_0744 htrA; periplasmic heat shock serine protease HtrA, Do family\tK04771 degP; serine protease Do [EC:3.4.21.107]"
				},
				{
					"name":"CUP3940_0605 cmeE; multidrug efflux system CmeDEF, membrane fusion component CmeE\tK03585 acrA; membrane fusion protein, multidrug efflux system"
				},
				{
					"name":"CUP3940_0919 cmeA; multidrug efflux system CmeABC, periplasmic fusion protein CmeA\tK03585 acrA; membrane fusion protein, multidrug efflux system"
				},
				{
					"name":"CUP3940_0604 cmeF; multidrug efflux system CmeDEF, integral membrane component CmeF\tK18138 acrB; multidrug efflux pump"
				},
				{
					"name":"CUP3940_0920 cmeB; multidrug efflux system CmeABC, inner membrane drug transporter CmeB\tK18138 acrB; multidrug efflux pump"
				},
				{
					"name":"CUP3940_0606 cmeD; multidrug efflux system CmeDEF, outer membrane component CmeD\tK12340 tolC; outer membrane protein"
				},
				{
					"name":"CUP3940_0216 lpxA; UDP-N-acetylglucosamine acyltransferase\tK00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]"
				}
				]
			}
			]
		},
		{
			"name":"09176 Drug resistance: antineoplastic",
			"children":[
			{
				"name":"01521 EGFR tyrosine kinase inhibitor resistance"
			},
			{
				"name":"01524 Platinum drug resistance"
			},
			{
				"name":"01523 Antifolate resistance"
			},
			{
				"name":"01522 Endocrine resistance"
			}
			]
		}
		]
	},
	{
		"name":"09180 Brite Hierarchies",
		"children":[
		{
			"name":"09181 Protein families: metabolism",
			"children":[
			{
				"name":"01000 Enzymes [BR:cux01000]"
			},
			{
				"name":"01001 Protein kinases [BR:cux01001]",
				"children":[
				{
					"name":"CUP3940_0722 two-component system sensor histidine kinase\tK07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]"
				},
				{
					"name":"CUP3940_0458 racS; two-component system sensor histidine kinase\tK02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]"
				},
				{
					"name":"CUP3940_0746 cprS; two-component system sensor histidine kinase\tK02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]"
				},
				{
					"name":"CUP3940_0932 dccS; two-component system sensor histidine kinase\tK02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]"
				},
				{
					"name":"CUP3940_0232 flgS; flagella-associated two-component system, sensor histidine kinase\tK02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]"
				},
				{
					"name":"CUP3940_0531 cheA; chemotaxis sensory histidine kinase\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]"
				}
				]
			},
			{
				"name":"01009 Protein phosphatases and associated proteins [BR:cux01009]",
				"children":[
				{
					"name":"CUP3940_0272 htpG; chaperone protein HtpG\tK04079 HSP90A; molecular chaperone HtpG"
				},
				{
					"name":"CUP3940_0533 serB; phosphoserine phosphatase\tK01079 serB; phosphoserine phosphatase [EC:3.1.3.3]"
				}
				]
			},
			{
				"name":"01002 Peptidases and inhibitors [BR:cux01002]",
				"children":[
				{
					"name":"CUP3940_0925 lspA; prolipoprotein signal peptidase II\tK03101 lspA; signal peptidase II [EC:3.4.23.36]"
				},
				{
					"name":"CUP3940_0769 peptidase A24 N-terminal domain-containing protein, putative prepilin signal peptidase\tK02654 pilD; leader peptidase (prepilin peptidase) \/ N-methyltransferase [EC:3.4.23.43 2.1.1.-]"
				},
				{
					"name":"CUP3940_1172 hydD; [Ni-Fe] hydrogenase maturation protease\tK03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]"
				},
				{
					"name":"CUP3940_1252 guaA; GMP synthase (glutamine-hydrolyzing)\tK01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]"
				},
				{
					"name":"CUP3940_0678 gamma-glutamyl hydrolase, peptidase C26 family\tK23150 E3.5.1.129; N5-(cytidine 5'-diphosphoramidyl)-L-glutamine hydrolase [EC:3.5.1.129]"
				},
				{
					"name":"CUP3940_0617 outer membrane lipoprotein, NlpC\/P60 family\tK13695 nlpC; probable lipoprotein NlpC"
				},
				{
					"name":"CUP3940_1422 purF; amidophosphoribosyltransferase\tK00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]"
				},
				{
					"name":"CUP3940_1462 amidophosphoribosyltransferase\tK00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]"
				},
				{
					"name":"CUP3940_1639 gltB; glutamate synthase, large subunit\tK00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]"
				},
				{
					"name":"CUP3940_1283 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]"
				},
				{
					"name":"CUP3940_0038 DJ-1 family protein\tK03152 thiJ; protein deglycase [EC:3.5.1.124]"
				},
				{
					"name":"CUP3940_0896 pepF; oligoendopeptidase F\tK08602 pepF; oligoendopeptidase F [EC:3.4.24.-]"
				},
				{
					"name":"CUP3940_0647 leucyl aminopeptidase, peptidase M17 family\tK01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]"
				},
				{
					"name":"CUP3940_0609 dapE; N-succinyl-diaminopimelate deacylase\tK01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]"
				},
				{
					"name":"CUP3940_1161 pepD; peptidase D\tK01270 pepD; dipeptidase D [EC:3.4.13.-]"
				},
				{
					"name":"CUP3940_0619 map; methionine aminopeptidase\tK01265 map; methionyl aminopeptidase [EC:3.4.11.18]"
				},
				{
					"name":"CUP3940_1324 pepP; proline aminopeptidase P\tK01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]"
				},
				{
					"name":"CUP3940_0558 ftsH1; integral membrane ATP-dependent zinc metallopeptidase\tK03798 ftsH; cell division protease FtsH [EC:3.4.24.-]"
				},
				{
					"name":"CUP3940_1108 ftsH2; integral membrane ATP-dependent zinc metallopeptidase (extracellular domain)\tK03798 ftsH; cell division protease FtsH [EC:3.4.24.-]"
				},
				{
					"name":"CUP3940_0431 RseP-like zinc metalloprotease, M50 family\tK11749 rseP; regulator of sigma E protease [EC:3.4.24.-]"
				},
				{
					"name":"CUP3940_0744 htrA; periplasmic heat shock serine protease HtrA, Do family\tK04771 degP; serine protease Do [EC:3.4.21.107]"
				},
				{
					"name":"CUP3940_1352 clpP; serine protease ClpP\tK01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]"
				},
				{
					"name":"CUP3940_0421 lon; DNA-binding, ATP-dependent protease La\tK01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]"
				},
				{
					"name":"CUP3940_1313 lepB; leader peptidase (signal peptidase I)\tK03100 lepB; signal peptidase I [EC:3.4.21.89]"
				},
				{
					"name":"CUP3940_0278 ctpA; carboxyl-terminal protease family protein\tK03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]"
				},
				{
					"name":"CUP3940_0631 sppA; signal peptide peptidase protease IV\tK04773 sppA; protease IV [EC:3.4.21.-]"
				},
				{
					"name":"CUP3940_0806 pepE; (alpha)-aspartyl dipeptidase (peptidase E)\tK05995 pepE; dipeptidase E [EC:3.4.13.21]"
				},
				{
					"name":"CUP3940_1330 hslV; heat shock protein HslVU, ATP-dependent protease subunit\tK01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]"
				},
				{
					"name":"CUP3940_0903 isoaspartyl peptidase \/ L-asparaginase\tK13051 ASRGL1; L-asparaginase \/ beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]"
				},
				{
					"name":"CUP3940_0956 collagenase-like peptidase, U32 family\tK08303 prtC; U32 family peptidase [EC:3.4.-.-]"
				}
				]
			},
			{
				"name":"01003 Glycosyltransferases [BR:cux01003]",
				"children":[
				{
					"name":"CUP3940_0879 cstI; alpha-2,3-sialyltransferase\tK12247 cstII; alpha-2,3\/2,8 sialyltransferase [EC:2.4.3.-]"
				},
				{
					"name":"CUP3940_0363 pbpA; penicillin-binding protein 1A\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]"
				},
				{
					"name":"CUP3940_0489 ftsW; cell division protein, FtsW\/RodA\/SpoVE family\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]"
				},
				{
					"name":"CUP3940_1189 rodA; rod shape-determining protein\tK05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]"
				},
				{
					"name":"CUP3940_1140 pglH; GalNAc-alpha-(1,4)-GalNAc-alpha-(1, 3)-diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase\tK17249 pglH; GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase [EC:2.4.1.292]"
				},
				{
					"name":"CUP3940_1139 pglI; GalNAc5-diNAcBac-PP-undecaprenol beta-1,3-glucosyltransferase\tK17250 pglI; GalNAc5-diNAcBac-PP-undecaprenol beta-1,3-glucosyltransferase [EC:2.4.1.293]"
				}
				]
			},
			{
				"name":"01005 Lipopolysaccharide biosynthesis proteins [BR:cux01005]",
				"children":[
				{
					"name":"CUP3940_0216 lpxA; UDP-N-acetylglucosamine acyltransferase\tK00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]"
				},
				{
					"name":"CUP3940_0527 lpxB; lipid A disaccharide synthase\tK00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]"
				},
				{
					"name":"CUP3940_1397 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase\tK02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]"
				},
				{
					"name":"CUP3940_1074 lpxD; UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase\tK02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]"
				},
				{
					"name":"CUP3940_0529 lpxH; UDP-2,3-diacylglucosamine hydrolase\tK03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]"
				},
				{
					"name":"CUP3940_0497 lpxK; tetraacyldisaccharide 4'-kinase\tK00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]"
				},
				{
					"name":"CUP3940_1145 waaM; lipid A biosynthesis lauroyl acyltransferase\tK02517 lpxL; Kdo2-lipid IVA lauroyltransferase\/acyltransferase [EC:2.3.1.241 2.3.1.-]"
				},
				{
					"name":"CUP3940_0950 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase)\tK02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]"
				},
				{
					"name":"CUP3940_0158 eptC; phosphoethanolamine transferase\tK03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]"
				},
				{
					"name":"CUP3940_0172 kdsA; 3-deoxy-D-manno-octulosonate 8-phosphate synthase\tK01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]"
				},
				{
					"name":"CUP3940_0495 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase\tK00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]"
				},
				{
					"name":"CUP3940_1460 putative 3-deoxy-manno-octulosonate cytidylyltransferase\tK00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]"
				},
				{
					"name":"CUP3940_0836 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family\tK03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]"
				},
				{
					"name":"CUP3940_0661 kpsF; D-arabinose 5-phosphate isomerase\tK06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]"
				},
				{
					"name":"CUP3940_1144 waaC; heptosyltransferase I\tK02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]"
				},
				{
					"name":"CUP3940_1171 waaF; heptosyltransferase II\tK02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]"
				},
				{
					"name":"CUP3940_1432 phosphoheptose isomerase\tK03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]"
				},
				{
					"name":"CUP3940_1070 gmhB; D,D-heptose 1,7-bisphosphate phosphatase\tK03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]"
				},
				{
					"name":"CUP3940_1072 waaE; D,D-heptose 1-phosphate adenosyltransferase \/ D,D-heptose 7-phosphate kinase\tK03272 gmhC; D-beta-D-heptose 7-phosphate kinase \/ D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]"
				},
				{
					"name":"CUP3940_1071 waaD; ADP-L-glycero-D-mannoheptose-6-epimerase\tK03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]"
				}
				]
			},
			{
				"name":"01011 Peptidoglycan biosynthesis and degradation proteins [BR:cux01011]",
				"children":[
				{
					"name":"CUP3940_0657 murA; UDP-N-acetylglucosamine enolpyruvoyl transferase\tK00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]"
				},
				{
					"name":"CUP3940_1559 murB; UDP-N-acetylenolpyruvoylglucosamine reductase\tK00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]"
				},
				{
					"name":"CUP3940_1050 murC; UDP-N-acetylmuramate-alanine ligase\tK01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]"
				},
				{
					"name":"CUP3940_1153 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase\tK01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]"
				},
				{
					"name":"CUP3940_1407 murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase\tK01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]"
				},
				{
					"name":"CUP3940_0470 ddlA; D-alanine--D-alanine ligase\tK01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]"
				},
				{
					"name":"CUP3940_0987 alr; alanine racemase\tK01775 alr; alanine racemase [EC:5.1.1.1]"
				},
				{
					"name":"CUP3940_0618 murI; glutamate racemase\tK01776 murI; glutamate racemase [EC:5.1.1.3]"
				},
				{
					"name":"CUP3940_1022 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase\tK01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]"
				},
				{
					"name":"CUP3940_0488 murG; N-acetylglucosaminyl transferase\tK02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]"
				},
				{
					"name":"CUP3940_1632 bacA; undecaprenyl pyrophosphate phosphatase\tK06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]"
				},
				{
					"name":"CUP3940_1168 murJ; lipid II flippase\tK03980 murJ; putative peptidoglycan lipid II flippase"
				},
				{
					"name":"CUP3940_0363 pbpA; penicillin-binding protein 1A\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]"
				},
				{
					"name":"CUP3940_0831 mrdA; penicillin-binding protein 2\tK05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]"
				},
				{
					"name":"CUP3940_0753 ftsI; cell division protein FtsI \/ penicillin-binding protein\tK03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]"
				},
				{
					"name":"CUP3940_0489 ftsW; cell division protein, FtsW\/RodA\/SpoVE family\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]"
				},
				{
					"name":"CUP3940_1189 rodA; rod shape-determining protein\tK05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]"
				},
				{
					"name":"CUP3940_0783 slt; soluble lytic murein transglycosylase\tK08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]"
				},
				{
					"name":"CUP3940_0838 mltD; membrane-bound lytic murein transglycosylase D\tK08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]"
				},
				{
					"name":"CUP3940_1322 YceG-like protein\tK07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]"
				},
				{
					"name":"CUP3940_0837 rlpA; septal ring lytic transglycosylase\tK03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]"
				},
				{
					"name":"CUP3940_1177 amiA; N-acetylmuramoyl-L-alanine amidase\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]"
				},
				{
					"name":"CUP3940_0312 hypothetical protein\tK06078 lpp; murein lipoprotein"
				}
				]
			},
			{
				"name":"01004 Lipid biosynthesis proteins [BR:cux01004]",
				"children":[
				{
					"name":"CUP3940_1569 fabD; malonyl-CoA-[acp] transacylase\tK00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]"
				},
				{
					"name":"CUP3940_1089 fabH; beta-ketoacyl-[acp] synthase III (KASIII)\tK00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]"
				},
				{
					"name":"CUP3940_0968 fabF; beta-ketoacyl-[acp] synthase II (KASII)\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]"
				},
				{
					"name":"CUP3940_0189 ptmA; glucosamine-6-P synthase, glutaminase subunit PtmA\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]"
				},
				{
					"name":"CUP3940_1020 fabG; 3-oxoacyl-[acp] reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]"
				},
				{
					"name":"CUP3940_0215 fabZ; 3-hydroxyacyl-[acp] dehydratase\tK02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]"
				},
				{
					"name":"CUP3940_1520 fabI; enoyl-[acp] reductase\tK00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]"
				},
				{
					"name":"CUP3940_0994 acyl-CoA thioesterase\tK10806 yciA; acyl-CoA thioesterase [EC:3.1.2.-]"
				},
				{
					"name":"CUP3940_1272 acs; acetyl-CoA synthetase\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]"
				},
				{
					"name":"CUP3940_1088 plsX; acyl phosphate synthase\tK03621 plsX; phosphate acyltransferase [EC:2.3.1.274]"
				},
				{
					"name":"CUP3940_0929 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase\tK08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]"
				},
				{
					"name":"CUP3940_0273 plsC; 1-acylglycerol-3-phosphate O-acyltransferase\tK00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]"
				}
				]
			},
			{
				"name":"01008 Polyketide biosynthesis proteins"
			},
			{
				"name":"01006 Prenyltransferases [BR:cux01006]",
				"children":[
				{
					"name":"CUP3940_1410 ispA; geranyl diphosphate synthase \/ farnesyl diphosphate synthase\tK13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]"
				},
				{
					"name":"CUP3940_0464 ispB; octaprenyl-diphosphate synthase\tK02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]"
				},
				{
					"name":"CUP3940_0768 ispU; undecaprenyl diphosphate synthetase\tK00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]"
				},
				{
					"name":"CUP3940_0343 miaA; tRNA(i6A37) synthase\tK00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]"
				},
				{
					"name":"CUP3940_0344 ubiA; 4-hydroxybenzoate octaprenyltransferase\tK03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]"
				}
				]
			},
			{
				"name":"01007 Amino acid related enzymes [BR:cux01007]",
				"children":[
				{
					"name":"CUP3940_0253 gltX2; glutamyl-tRNA synthetase\tK01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]"
				},
				{
					"name":"CUP3940_0785 gltX1; glutamyl-tRNA synthetase\tK09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]"
				},
				{
					"name":"CUP3940_1179 tyrS; tyrosyl-tRNA synthetase\tK01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]"
				},
				{
					"name":"CUP3940_0243 trpS; tryptophanyl-tRNA synthetase\tK01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]"
				},
				{
					"name":"CUP3940_1167 cysS; cysteinyl-tRNA synthetase\tK01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]"
				},
				{
					"name":"CUP3940_1199 argS; arginyl-tRNA synthetase\tK01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]"
				},
				{
					"name":"CUP3940_0779 metS; methionyl-tRNA synthetase\tK01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]"
				},
				{
					"name":"CUP3940_0434 ileS; isoleucyl-tRNA synthetase\tK01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]"
				},
				{
					"name":"CUP3940_1239 valS; valyl-tRNA synthetase\tK01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]"
				},
				{
					"name":"CUP3940_0592 leuS; leucyl-tRNA synthetase\tK01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]"
				},
				{
					"name":"CUP3940_1045 lysS; lysyl-tRNA synthetase\tK04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]"
				},
				{
					"name":"CUP3940_0843 aspS; aspartyl-tRNA synthetase\tK01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]"
				},
				{
					"name":"CUP3940_0368 hisS; histidyl-tRNA synthetase\tK01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]"
				},
				{
					"name":"CUP3940_0953 glyQ; glycyl-tRNA synthetase, alpha chain\tK01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]"
				},
				{
					"name":"CUP3940_0738 glyS; glycyl-tRNA synthetase, beta chain\tK01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]"
				},
				{
					"name":"CUP3940_0244 serS; seryl-tRNA synthetase\tK01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]"
				},
				{
					"name":"CUP3940_0462 proS; prolyl-tRNA synthetase\tK01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]"
				},
				{
					"name":"CUP3940_1631 thrS; threonyl-tRNA synthetase\tK01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]"
				},
				{
					"name":"CUP3940_0365 alaS; alanyl-tRNA synthetase\tK01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]"
				},
				{
					"name":"CUP3940_0977 pheS; phenylalanyl-tRNA synthetase, alpha subunit\tK01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]"
				},
				{
					"name":"CUP3940_0978 pheT; phenylalanyl-tRNA synthetase, beta subunit\tK01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]"
				},
				{
					"name":"CUP3940_0642 aspB; aspartate aminotransferase, class I and II aminotransferase\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]"
				},
				{
					"name":"CUP3940_0358 aspartate aminotransferase, class I and II aminotransferase\tK14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]"
				},
				{
					"name":"CUP3940_1099 hisC; histidinol-phosphate aminotransferase\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]"
				},
				{
					"name":"CUP3940_0693 bioF; 8-amino-7-oxononanoate synthase\tK00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]"
				},
				{
					"name":"CUP3940_1621 argD; N-succinyldiaminopimelate-aminotransferase \/ acetylornithine transaminase\tK00821 argD; acetylornithine\/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]"
				},
				{
					"name":"CUP3940_0899 bioA; adenosylmethionine--8-amino-7-oxononanoate aminotransferase\tK00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]"
				},
				{
					"name":"CUP3940_1132 hemL; glutamate-1-semialdehyde aminotransferase\tK01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]"
				},
				{
					"name":"CUP3940_0544 D-amino acid aminotransferase\tK00824 dat; D-alanine transaminase [EC:2.6.1.21]"
				},
				{
					"name":"CUP3940_0205 ilvE; branched-chain amino-acid aminotransferase\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]"
				},
				{
					"name":"CUP3940_1090 serC; phosphohydroxythreonine aminotransferase \/ 3-phosphoserine aminotransferase\tK00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]"
				}
				]
			},
			{
				"name":"00199 Cytochrome P450"
			},
			{
				"name":"00194 Photosynthesis proteins [BR:cux00194]",
				"children":[
				{
					"name":"CUP3940_1580 atpC; ATP synthase, F1 complex, epsilon subunit\tK02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon"
				},
				{
					"name":"CUP3940_1581 atpD; ATP synthase, F1 complex, beta subunit\tK02112 ATPF1B; F-type H+\/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]"
				},
				{
					"name":"CUP3940_1582 atpG; ATP synthase, F1 complex, gamma subunit\tK02115 ATPF1G; F-type H+-transporting ATPase subunit gamma"
				},
				{
					"name":"CUP3940_1583 atpA; ATP synthase, F1 complex, alpha subunit\tK02111 ATPF1A; F-type H+\/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]"
				},
				{
					"name":"CUP3940_1584 atpH; ATP synthase, F1 complex, delta subunit\tK02113 ATPF1D; F-type H+-transporting ATPase subunit delta"
				},
				{
					"name":"CUP3940_1585 atpF; ATP synthase, F0 complex, b subunit\tK02109 ATPF0B; F-type H+-transporting ATPase subunit b"
				},
				{
					"name":"CUP3940_1586 atpF'; ATP synthase, F0 complex, b' subunit\tK02109 ATPF0B; F-type H+-transporting ATPase subunit b"
				},
				{
					"name":"CUP3940_0702 atpE; ATP synthase, F0 complex, c subunit\tK02110 ATPF0C; F-type H+-transporting ATPase subunit c"
				},
				{
					"name":"CUP3940_0193 atpB; ATP synthase, F0 complex, a subunit\tK02108 ATPF0A; F-type H+-transporting ATPase subunit a"
				}
				]
			}
			]
		},
		{
			"name":"09182 Protein families: genetic information processing",
			"children":[
			{
				"name":"03000 Transcription factors [BR:cux03000]",
				"children":[
				{
					"name":"CUP3940_0551 type II cytosine-specific DNA methyltransferase\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]"
				},
				{
					"name":"CUP3940_1467 type IIP restriction\/modification system, cytosine-specific DNA methyltransferase\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]"
				},
				{
					"name":"CUP3940_1640 type IIP restriction\/modification system, cytosine-specific DNA methyltransferase\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]"
				},
				{
					"name":"CUP3940_0918 cmeR; multidrug efflux system CmeABC transcriptional regulator, TetR family\tK18992 cmeR; TetR\/AcrR family transcriptional regulator, cmeABC operon repressor"
				},
				{
					"name":"CUP3940_0742 hspR; heat shock transcriptional regulator, MerR family\tK13640 hspR; MerR family transcriptional regulator, heat shock protein HspR"
				},
				{
					"name":"CUP3940_1044 fur; ferric uptake regulation protein\tK03711 fur; Fur family transcriptional regulator, ferric uptake regulator"
				},
				{
					"name":"CUP3940_1094 perR; peroxide stress transcriptional regulator PerR\tK09825 perR; Fur family transcriptional regulator, peroxide stress response regulator"
				},
				{
					"name":"CUP3940_0362 transcriptional regulator, Crp\/Fnr family\tK01420 fnr; CRP\/FNR family transcriptional regulator, anaerobic regulatory protein"
				},
				{
					"name":"CUP3940_1589 birA; biotin-[acetyl-CoA-carboxylase] ligase\tK03524 birA; BirA family transcriptional regulator, biotin operon repressor \/ biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]"
				},
				{
					"name":"CUP3940_1549 putA; proline dehydrogenase \/ 1-pyrroline-5-carboxylate dehydrogenase\tK13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor \/ proline dehydrogenase \/ delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]"
				},
				{
					"name":"CUP3940_0935 putative transcriptional regulator\tK18918 relB; RHH-type transcriptional regulator, rel operon repressor \/ antitoxin RelB"
				},
				{
					"name":"CUP3940_0279 transcriptional regulator, FrmR family\tK21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor"
				},
				{
					"name":"CUP3940_1587 parB; chromosome partitioning protein\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein"
				},
				{
					"name":"CUP3940_0508 hrcA; heat-inducible transcription repressor\tK03705 hrcA; heat-inducible transcriptional repressor"
				},
				{
					"name":"CUP3940_0970 transcriptional regulator, TenA family\tK03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]"
				},
				{
					"name":"CUP3940_1391 dksA; DnaK suppressor protein\tK06204 dksA; RNA polymerase-binding transcription factor"
				}
				]
			},
			{
				"name":"03021 Transcription machinery [BR:cux03021]",
				"children":[
				{
					"name":"CUP3940_1369 rpoA; DNA-directed RNA polymerase, alpha subunit\tK03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]"
				},
				{
					"name":"CUP3940_1294 rpoB; DNA-directed RNA polymerase, beta subunit\tK03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]"
				},
				{
					"name":"CUP3940_1293 rpoC; DNA-directed RNA polymerase, beta' subunit\tK03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]"
				},
				{
					"name":"CUP3940_1181 rpoZ; DNA-directed RNA polymerase, omega subunit\tK03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]"
				},
				{
					"name":"CUP3940_1234 rpoD; RNA polymerase sigma70 factor\tK03086 rpoD; RNA polymerase primary sigma factor"
				},
				{
					"name":"CUP3940_0849 rpoN; RNA polymerase sigma54 factor\tK03092 rpoN; RNA polymerase sigma-54 factor"
				},
				{
					"name":"CUP3940_0638 fliA; RNA polymerase sigma28 factor\tK02405 fliA; RNA polymerase sigma factor FliA"
				},
				{
					"name":"CUP3940_0708 nusA; transcription termination factor\tK02600 nusA; transcription termination\/antitermination protein NusA"
				},
				{
					"name":"CUP3940_0170 nusB; transcription antitermination protein\tK03625 nusB; transcription antitermination protein NusB"
				},
				{
					"name":"CUP3940_1299 nusG; transcription antitermination protein\tK02601 nusG; transcription termination\/antitermination protein NusG"
				},
				{
					"name":"CUP3940_1391 dksA; DnaK suppressor protein\tK06204 dksA; RNA polymerase-binding transcription factor"
				},
				{
					"name":"CUP3940_0528 greA; transcription elongation factor GreA\tK03624 greA; transcription elongation factor GreA"
				},
				{
					"name":"CUP3940_1066 rho; transcription termination factor\tK03628 rho; transcription termination factor Rho"
				}
				]
			},
			{
				"name":"03019 Messenger RNA biogenesis [BR:cux03019]",
				"children":[
				{
					"name":"CUP3940_0306 rnc; ribonuclease III\tK03685 rnc; ribonuclease III [EC:3.1.26.3]"
				},
				{
					"name":"CUP3940_1616 mRNA degradation ribonuclease J1\/J2 (metallo-beta-lactamase superfamily)\tK12574 rnj; ribonuclease J [EC:3.1.-.-]"
				},
				{
					"name":"CUP3940_1378 ribonuclease Y\tK18682 rny; ribonucrease Y [EC:3.1.-.-]"
				},
				{
					"name":"CUP3940_0756 rnr; ribonuclease R\tK12573 rnr; ribonuclease R [EC:3.1.13.1]"
				},
				{
					"name":"CUP3940_1555 eno; enolase\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]"
				},
				{
					"name":"CUP3940_1011 pnp; polynucleotide phosphorylase\tK00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]"
				},
				{
					"name":"CUP3940_1066 rho; transcription termination factor\tK03628 rho; transcription termination factor Rho"
				},
				{
					"name":"CUP3940_0506 dnaK; DnaK system heat shock chaperone\tK04043 dnaK; molecular chaperone DnaK"
				},
				{
					"name":"CUP3940_0961 groEL; 60 kD chaperonin (cpn60)\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]"
				},
				{
					"name":"CUP3940_1156 ppk; polyphosphate kinase 1\tK00937 ppk1; polyphosphate kinase [EC:2.7.4.1]"
				},
				{
					"name":"CUP3940_0256 ppk2; polyphosphate kinase 2\tK22468 ppk2; polyphosphate kinase [EC:2.7.4.34]"
				},
				{
					"name":"CUP3940_0579 rppH; RNA pyrophosphohydrolase\tK08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]"
				},
				{
					"name":"CUP3940_0892 csrA; carbon storage regulator\tK03563 csrA; carbon storage regulator"
				}
				]
			},
			{
				"name":"03041 Spliceosome"
			},
			{
				"name":"03011 Ribosome [BR:cux03011]",
				"children":[
				{
					"name":"CUP3940_0981 rpsA; 30S ribosomal protein S1\tK02945 RP-S1; small subunit ribosomal protein S1"
				},
				{
					"name":"CUP3940_1206 rpsB; 30S ribosomal protein S2\tK02967 RP-S2; small subunit ribosomal protein S2"
				},
				{
					"name":"CUP3940_1604 rpsC; 30S ribosomal protein S3\tK02982 RP-S3; small subunit ribosomal protein S3"
				},
				{
					"name":"CUP3940_1370 rpsD; 30S ribosomal protein S4\tK02986 RP-S4; small subunit ribosomal protein S4"
				},
				{
					"name":"CUP3940_1593 rpsE; 30S ribosomal protein S5\tK02988 RP-S5; small subunit ribosomal protein S5"
				},
				{
					"name":"CUP3940_0430 rpsF; 30S ribosomal protein S6\tK02990 RP-S6; small subunit ribosomal protein S6"
				},
				{
					"name":"CUP3940_1288 rpsG; 30S ribosomal protein S7\tK02992 RP-S7; small subunit ribosomal protein S7"
				},
				{
					"name":"CUP3940_1596 rpsH; 30S ribosomal protein S8\tK02994 RP-S8; small subunit ribosomal protein S8"
				},
				{
					"name":"CUP3940_0124 rpsI; 30S ribosomal protein S9\tK02996 RP-S9; small subunit ribosomal protein S9"
				},
				{
					"name":"CUP3940_1611 rpsJ; 30S ribosomal protein S10\tK02946 RP-S10; small subunit ribosomal protein S10"
				},
				{
					"name":"CUP3940_1371 rpsK; 30S ribosomal protein S11\tK02948 RP-S11; small subunit ribosomal protein S11"
				},
				{
					"name":"CUP3940_1289 rpsL; 30S ribosomal protein S12\tK02950 RP-S12; small subunit ribosomal protein S12"
				},
				{
					"name":"CUP3940_1372 rpsM; 30S ribosomal protein S13\tK02952 RP-S13; small subunit ribosomal protein S13"
				},
				{
					"name":"CUP3940_1597 rpsN; 30S ribosomal protein S14\tK02954 RP-S14; small subunit ribosomal protein S14"
				},
				{
					"name":"CUP3940_0797 rpsO; 30S ribosomal protein S15\tK02956 RP-S15; small subunit ribosomal protein S15"
				},
				{
					"name":"CUP3940_0947 rpsP; 30S ribosomal protein S16\tK02959 RP-S16; small subunit ribosomal protein S16"
				},
				{
					"name":"CUP3940_1601 rpsQ; 30S ribosomal protein S17\tK02961 RP-S17; small subunit ribosomal protein S17"
				},
				{
					"name":"CUP3940_0428 rpsR; 30S ribosomal protein S18\tK02963 RP-S18; small subunit ribosomal protein S18"
				},
				{
					"name":"CUP3940_1606 rpsS; 30S ribosomal protein S19\tK02965 RP-S19; small subunit ribosomal protein S19"
				},
				{
					"name":"CUP3940_0314 rpsT; 30S ribosomal protein S20\tK02968 RP-S20; small subunit ribosomal protein S20"
				},
				{
					"name":"CUP3940_0916 rpsU; 30S ribosomal protein S21\tK02970 RP-S21; small subunit ribosomal protein S21"
				},
				{
					"name":"CUP3940_1297 rplA; 50S ribosomal protein L1\tK02863 RP-L1; large subunit ribosomal protein L1"
				},
				{
					"name":"CUP3940_1607 rplB; 50S ribosomal protein L2\tK02886 RP-L2; large subunit ribosomal protein L2"
				},
				{
					"name":"CUP3940_1610 rplC; 50S ribosomal protein L3\tK02906 RP-L3; large subunit ribosomal protein L3"
				},
				{
					"name":"CUP3940_1609 rplD; 50S ribosomal protein L4\tK02926 RP-L4; large subunit ribosomal protein L4"
				},
				{
					"name":"CUP3940_1598 rplE; 50S ribosomal protein L5\tK02931 RP-L5; large subunit ribosomal protein L5"
				},
				{
					"name":"CUP3940_1595 rplF; 50S ribosomal protein L6\tK02933 RP-L6; large subunit ribosomal protein L6"
				},
				{
					"name":"CUP3940_1331 rplI; 50S ribosomal protein L9\tK02939 RP-L9; large subunit ribosomal protein L9"
				},
				{
					"name":"CUP3940_1296 rplJ; 50S ribosomal protein L10\tK02864 RP-L10; large subunit ribosomal protein L10"
				},
				{
					"name":"CUP3940_1298 rplK; 50S ribosomal protein L11\tK02867 RP-L11; large subunit ribosomal protein L11"
				},
				{
					"name":"CUP3940_1295 rplL; 50S ribosomal protein L7\/L12\tK02935 RP-L7; large subunit ribosomal protein L7\/L12"
				},
				{
					"name":"CUP3940_0123 rplM; 50S ribosomal protein L13\tK02871 RP-L13; large subunit ribosomal protein L13"
				},
				{
					"name":"CUP3940_1600 rplN; 50S ribosomal protein L14\tK02874 RP-L14; large subunit ribosomal protein L14"
				},
				{
					"name":"CUP3940_1592 rplO; 50S ribosomal protein L15\tK02876 RP-L15; large subunit ribosomal protein L15"
				},
				{
					"name":"CUP3940_1603 rplP; 50S ribosomal protein L16\tK02878 RP-L16; large subunit ribosomal protein L16"
				},
				{
					"name":"CUP3940_1368 rplQ; 50S ribosomal protein L17\tK02879 RP-L17; large subunit ribosomal protein L17"
				},
				{
					"name":"CUP3940_1594 rplR; 50S ribosomal protein L18\tK02881 RP-L18; large subunit ribosomal protein L18"
				},
				{
					"name":"CUP3940_0943 rplS; 50S ribosomal protein L19\tK02884 RP-L19; large subunit ribosomal protein L19"
				},
				{
					"name":"CUP3940_0030 rplT; 50S ribosomal protein L20\tK02887 RP-L20; large subunit ribosomal protein L20"
				},
				{
					"name":"CUP3940_0061 rplU; 50S ribosomal protein L21\tK02888 RP-L21; large subunit ribosomal protein L21"
				},
				{
					"name":"CUP3940_1605 rplV; 50S ribosomal protein L22\tK02890 RP-L22; large subunit ribosomal protein L22"
				},
				{
					"name":"CUP3940_1608 rplW; 50S ribosomal protein L23\tK02892 RP-L23; large subunit ribosomal protein L23"
				},
				{
					"name":"CUP3940_1599 rplX; 50S ribosomal protein L24\tK02895 RP-L24; large subunit ribosomal protein L24"
				},
				{
					"name":"CUP3940_0060 rpmA; 50S ribosomal protein L27\tK02899 RP-L27; large subunit ribosomal protein L27"
				},
				{
					"name":"CUP3940_0729 rpmB; 50S ribosomal protein L28\tK02902 RP-L28; large subunit ribosomal protein L28"
				},
				{
					"name":"CUP3940_1602 rpmC; 50S ribosomal protein L29\tK02904 RP-L29; large subunit ribosomal protein L29"
				},
				{
					"name":"CUP3940_0353 rpmE; 50S ribosomal protein L31\tK02909 RP-L31; large subunit ribosomal protein L31"
				},
				{
					"name":"CUP3940_1087 rpmF; 50S ribosomal protein L32\tK02911 RP-L32; large subunit ribosomal protein L32"
				},
				{
					"name":"CUP3940_1302 rpmG; 50S ribosomal protein L33\tK02913 RP-L33; large subunit ribosomal protein L33"
				},
				{
					"name":"CUP3940_0874 rpmH; 50S ribosomal protein L34\tK02914 RP-L34; large subunit ribosomal protein L34"
				},
				{
					"name":"CUP3940_0029 rpmI; 50S ribosomal protein L35\tK02916 RP-L35; large subunit ribosomal protein L35"
				},
				{
					"name":"CUP3940_1373 rpmJ; 50S ribosomal protein L36\tK02919 RP-L36; large subunit ribosomal protein L36"
				},
				{
					"name":"CUP3940_0535 rplY; 50S ribosomal protein L25\tK02897 RP-L25; large subunit ribosomal protein L25"
				},
				{
					"name":"CUP3940_0049 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA"
				},
				{
					"name":"CUP3940_0440 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA"
				},
				{
					"name":"CUP3940_0683 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA"
				},
				{
					"name":"CUP3940_0055 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA"
				},
				{
					"name":"CUP3940_0413 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA"
				},
				{
					"name":"CUP3940_1027 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA"
				},
				{
					"name":"CUP3940_0056 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA"
				},
				{
					"name":"CUP3940_0412 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA"
				},
				{
					"name":"CUP3940_1026 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA"
				}
				]
			},
			{
				"name":"03009 Ribosome biogenesis [BR:cux03009]",
				"children":[
				{
					"name":"CUP3940_0306 rnc; ribonuclease III\tK03685 rnc; ribonuclease III [EC:3.1.26.3]"
				},
				{
					"name":"CUP3940_1328 era; GTP-binding protein\tK03595 era; GTPase"
				},
				{
					"name":"CUP3940_0005 obgE; GTPase ObgE\tK03979 obgE; GTPase [EC:3.6.5.-]"
				},
				{
					"name":"CUP3940_1391 dksA; DnaK suppressor protein\tK06204 dksA; RNA polymerase-binding transcription factor"
				},
				{
					"name":"CUP3940_0708 nusA; transcription termination factor\tK02600 nusA; transcription termination\/antitermination protein NusA"
				},
				{
					"name":"CUP3940_0170 nusB; transcription antitermination protein\tK03625 nusB; transcription antitermination protein NusB"
				},
				{
					"name":"CUP3940_1299 nusG; transcription antitermination protein\tK02601 nusG; transcription termination\/antitermination protein NusG"
				},
				{
					"name":"CUP3940_1617 rsmA; 16S rRNA (adenine1518-N6\/adenine1519-N6)-dimethyltransferase\tK02528 ksgA; 16S rRNA (adenine1518-N6\/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]"
				},
				{
					"name":"CUP3940_0352 rsmE; 16S rRNA m3U1498 methyltransferase\tK09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]"
				},
				{
					"name":"CUP3940_0295 rsmG; 16S rRNA m7G527 methyltransferase\tK03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]"
				},
				{
					"name":"CUP3940_0541 rsmH; 16S rRNA m4C1402 methyltransferase\tK03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]"
				},
				{
					"name":"CUP3940_0354 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase\tK07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]"
				},
				{
					"name":"CUP3940_0585 tlyA; 16S\/23S rRNA (cytidine-2'-O)-methyltransferase\tK06442 tlyA; 23S rRNA (cytidine1920-2'-O)\/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]"
				},
				{
					"name":"CUP3940_0355 rRNA methyltransferase, TrmH family, group 3\tK03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]"
				},
				{
					"name":"CUP3940_1392 SPOUT methyltransferase\tK00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]"
				},
				{
					"name":"CUP3940_1619 rlmN; 23S rRNA m2A2503 methyltransferase \/ tRNA m2A37 methyltransferase\tK06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]"
				},
				{
					"name":"CUP3940_1644 rluB; 23S rRNA pseudouridine 2605 synthase\tK06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]"
				},
				{
					"name":"CUP3940_0949 rluA; 23S rRNA and tRNA pseudouridine synthase\tK06180 rluD; 23S rRNA pseudouridine1911\/1915\/1917 synthase [EC:5.4.99.23]"
				},
				{
					"name":"CUP3940_1188 rluD; 23S rRNA pseudouridine synthase\tK06180 rluD; 23S rRNA pseudouridine1911\/1915\/1917 synthase [EC:5.4.99.23]"
				},
				{
					"name":"CUP3940_1612 RNA pseudouridine synthase\tK06180 rluD; 23S rRNA pseudouridine1911\/1915\/1917 synthase [EC:5.4.99.23]"
				},
				{
					"name":"CUP3940_0420 acetyltransferase\tK03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase \/ [ribosomal protein L31]-L-lysine N-acetyltransferase [EC:2.3.1.266 2.3.1.338]"
				},
				{
					"name":"CUP3940_0945 rimM; 16S rRNA processing protein\tK02860 rimM; 16S rRNA processing protein RimM"
				},
				{
					"name":"CUP3940_0670 radical SAM methylthiotransferase, MiaB\/RimO family\tK14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]"
				},
				{
					"name":"CUP3940_1109 prmA; 50S ribosomal protein L11 methyltransferase\tK02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]"
				},
				{
					"name":"CUP3940_0760 Holliday junction resolvase-like protein (UPF0081 domain)\tK07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]"
				},
				{
					"name":"CUP3940_0241 engA; GTP-binding protein\tK03977 engA; GTPase"
				},
				{
					"name":"CUP3940_1180 spoT; ppGpp synthetase \/ guanosine-3',5'-bis(diphosphate) 3' pyrophosphohydrolase\tK01139 spoT; GTP diphosphokinase \/ guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]"
				},
				{
					"name":"CUP3940_1402 rbfA; ribosome-binding factor A\tK02834 rbfA; ribosome-binding factor A"
				},
				{
					"name":"CUP3940_1403 DUF150 domain-containing protein\tK09748 rimP; ribosome maturation factor RimP"
				},
				{
					"name":"CUP3940_1515 rsfS; ribosome silencing factor\tK09710 ybeB; ribosome-associated protein"
				},
				{
					"name":"CUP3940_1551 ybeY; rRNA maturation RNase\tK07042 ybeY; probable rRNA maturation factor"
				},
				{
					"name":"CUP3940_0648 ychF; GTP-binding protein, putative GTP-dependent translation factor\tK06942 ychF; ribosome-binding ATPase"
				}
				]
			},
			{
				"name":"03016 Transfer RNA biogenesis [BR:cux03016]",
				"children":[
				{
					"name":"CUP3940_0818 cca; multifunctional tRNA nucleotidyl transferase \/ 2'3'-cyclic phosphodiesterase \/ 2'nucleotidase \/ phosphatase\tK00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]"
				},
				{
					"name":"CUP3940_0253 gltX2; glutamyl-tRNA synthetase\tK01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]"
				},
				{
					"name":"CUP3940_0462 proS; prolyl-tRNA synthetase\tK01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]"
				},
				{
					"name":"CUP3940_0434 ileS; isoleucyl-tRNA synthetase\tK01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]"
				},
				{
					"name":"CUP3940_0592 leuS; leucyl-tRNA synthetase\tK01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]"
				},
				{
					"name":"CUP3940_0779 metS; methionyl-tRNA synthetase\tK01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]"
				},
				{
					"name":"CUP3940_1199 argS; arginyl-tRNA synthetase\tK01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]"
				},
				{
					"name":"CUP3940_1045 lysS; lysyl-tRNA synthetase\tK04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]"
				},
				{
					"name":"CUP3940_0843 aspS; aspartyl-tRNA synthetase\tK01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]"
				},
				{
					"name":"CUP3940_0365 alaS; alanyl-tRNA synthetase\tK01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]"
				},
				{
					"name":"CUP3940_1631 thrS; threonyl-tRNA synthetase\tK01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]"
				},
				{
					"name":"CUP3940_0244 serS; seryl-tRNA synthetase\tK01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]"
				},
				{
					"name":"CUP3940_1167 cysS; cysteinyl-tRNA synthetase\tK01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]"
				},
				{
					"name":"CUP3940_1239 valS; valyl-tRNA synthetase\tK01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]"
				},
				{
					"name":"CUP3940_0368 hisS; histidyl-tRNA synthetase\tK01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]"
				},
				{
					"name":"CUP3940_0977 pheS; phenylalanyl-tRNA synthetase, alpha subunit\tK01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]"
				},
				{
					"name":"CUP3940_0978 pheT; phenylalanyl-tRNA synthetase, beta subunit\tK01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]"
				},
				{
					"name":"CUP3940_1179 tyrS; tyrosyl-tRNA synthetase\tK01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]"
				},
				{
					"name":"CUP3940_0243 trpS; tryptophanyl-tRNA synthetase\tK01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]"
				},
				{
					"name":"CUP3940_0517 histidine triad nucleotide-binding protein, Hint\/PKCI branch\tK02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]"
				},
				{
					"name":"CUP3940_0710 miaB; isopentenyl-adenosine A37 tRNA methylthiolase\tK06168 CDK5RAP1; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]"
				},
				{
					"name":"CUP3940_0559 putative tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase MtaB\tK15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase [EC:2.8.4.5]"
				},
				{
					"name":"CUP3940_1186 trmI; tRNA m7G46 methyltransferase\tK03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]"
				},
				{
					"name":"CUP3940_0771 truA; tRNA pseudouridine(38-40) synthase\tK06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]"
				},
				{
					"name":"CUP3940_0893 truB; tRNA pseudouridine 55 synthase\tK03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]"
				},
				{
					"name":"CUP3940_0091 truD; tRNA pseudouridine 13 synthase\tK06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]"
				},
				{
					"name":"CUP3940_0026 iscS; cysteine desulfurase\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]"
				},
				{
					"name":"CUP3940_0343 miaA; tRNA(i6A37) synthase\tK00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]"
				},
				{
					"name":"CUP3940_0869 mnmE; 5-carboxymethylaminomethyluridine-tRNA synthase MnmEG, GTPase component\tK03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]"
				},
				{
					"name":"CUP3940_1210 mnmG; 5-carboxymethylaminomethyluridine-tRNA synthase MnmEG, MnmG component\tK03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme"
				},
				{
					"name":"CUP3940_1532 selD; selenophosphate synthetase\tK01008 selD; selenide, water dikinase [EC:2.7.9.3]"
				},
				{
					"name":"CUP3940_1563 cysQ; adenosine-3'(2'),5'-bisphosphate nucleotidase\tK01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]"
				},
				{
					"name":"CUP3940_0873 rnpA; ribonuclease P, protein component\tK03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]"
				},
				{
					"name":"CUP3940_0448 rnpB; ribonuclease P, RNA component\tK01978 rnpB; RNase P catalytic RNA component"
				},
				{
					"name":"CUP3940_0953 glyQ; glycyl-tRNA synthetase, alpha chain\tK01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]"
				},
				{
					"name":"CUP3940_0738 glyS; glycyl-tRNA synthetase, beta chain\tK01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]"
				},
				{
					"name":"CUP3940_0785 gltX1; glutamyl-tRNA synthetase\tK09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]"
				},
				{
					"name":"CUP3940_1389 dusB; tRNA-dihydrouridine synthase B\tK05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]"
				},
				{
					"name":"CUP3940_0587 cmoA; carboxy-S-adenosyl-L-methionine synthase\tK15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]"
				},
				{
					"name":"CUP3940_0796 cmoB; tRNA (cmo5U34)-carboxymethyltransferase\tK15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]"
				},
				{
					"name":"CUP3940_0773 trmA; tRNA m5U54 methyltransferase\tK00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]"
				},
				{
					"name":"CUP3940_0944 trmD; tRNA m1G37 methyltransferase\tK00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]"
				},
				{
					"name":"CUP3940_0986 rRNA methylase, SpoU family\tK03216 trmL; tRNA (cytidine\/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]"
				},
				{
					"name":"CUP3940_0761 16S rRNA m5C methyltransferase, RsmB\/RsmF family\tK22901 trm4; tRNA (cytosine40_48-C5)-methyltransferase [EC:2.1.1.-]"
				},
				{
					"name":"CUP3940_0301 tRNA U34 2-thiouridine synthase, MnmA family\tK00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]"
				},
				{
					"name":"CUP3940_0621 mnmA; tRNA U34 2-thiouridylase\tK00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]"
				},
				{
					"name":"CUP3940_1567 ttcA; tRNA cytosine32 2-sulfurtransferase\tK14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA"
				},
				{
					"name":"CUP3940_1176 mnmC; bifunctional 5-methylaminomethyl-2-thiouridine-forming methyltransferase \/ FAD-dependent demodification enzyme\tK15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]"
				},
				{
					"name":"CUP3940_0859 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase\tK07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]"
				},
				{
					"name":"CUP3940_1497 queC; 7-cyano-7-deazaguanine synthase\tK06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]"
				},
				{
					"name":"CUP3940_0349 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase\tK01737 queD; 6-pyruvoyltetrahydropterin\/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]"
				},
				{
					"name":"CUP3940_0348 queE; 7-carboxy-7-deazaguanine synthase\tK10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]"
				},
				{
					"name":"CUP3940_0004 queF; 7-cyano-7-deazaguanine reductase\tK09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]"
				},
				{
					"name":"CUP3940_0213 DUF208 domain-containing protein\tK09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]"
				},
				{
					"name":"CUP3940_1217 selU; tRNA 2-selenouridine synthase\tK06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]"
				},
				{
					"name":"CUP3940_0659 tgt; queuine tRNA-ribosyltransferase\tK00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]"
				},
				{
					"name":"CUP3940_0671 tilS; tRNA(Ile)-lysidine synthetase\tK04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]"
				},
				{
					"name":"CUP3940_1398 tsaB; N6-L-threonylcarbamoyladenine synthase, TsaB subunit\tK14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB"
				},
				{
					"name":"CUP3940_1002 tsaD; N6-L-threonylcarbamoyladenine synthase, TsaD subunit\tK25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]"
				},
				{
					"name":"CUP3940_0847 tsaE; N6-L-threonylcarbamoyladenine synthase, TsaE subunit\tK06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE"
				},
				{
					"name":"CUP3940_0522 tcdA; tRNA threonylcarbamoyladenosine dehydratase\tK22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase"
				},
				{
					"name":"CUP3940_0756 rnr; ribonuclease R\tK12573 rnr; ribonuclease R [EC:3.1.13.1]"
				},
				{
					"name":"CUP3940_1011 pnp; polynucleotide phosphorylase\tK00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]"
				}
				]
			},
			{
				"name":"03012 Translation factors [BR:cux03012]",
				"children":[
				{
					"name":"CUP3940_1401 infB; translation initiation factor IF-2\tK02519 infB; translation initiation factor IF-2"
				},
				{
					"name":"CUP3940_1630 infC; translation initiation factor IF-3\tK02520 infC; translation initiation factor IF-3"
				},
				{
					"name":"CUP3940_1205 tsf; translation elongation factor EF-Ts\tK02357 tsf; elongation factor Ts"
				},
				{
					"name":"CUP3940_1303 tuf; translation elongation factor Tu\tK02358 tuf; elongation factor Tu"
				},
				{
					"name":"CUP3940_1287 fusA; translation elongation factor EF-G\tK02355 fusA; elongation factor G"
				},
				{
					"name":"CUP3940_1471 selB; selenocysteine-specific elongation factor\tK03833 selB; selenocysteine-specific elongation factor"
				},
				{
					"name":"CUP3940_0313 prfA; peptide chain release factor 1\tK02835 prfA; peptide chain release factor 1"
				},
				{
					"name":"CUP3940_0150 frr; ribosome releasing factor\tK02838 frr; ribosome recycling factor"
				},
				{
					"name":"CUP3940_0569 hemK; protein-(glutamine-N5) methyltransferase\tK02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]"
				},
				{
					"name":"CUP3940_0536 pth; peptidyl-tRNA hydrolase\tK01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]"
				},
				{
					"name":"CUP3940_0194 infA; translation initiation factor IF-1\tK02518 infA; translation initiation factor IF-1"
				},
				{
					"name":"CUP3940_0446 efp; translation elongation factor EF-P\tK02356 efp; elongation factor P"
				},
				{
					"name":"CUP3940_0650 prfB; peptide chain release factor 2\tK02836 prfB; peptide chain release factor 2"
				}
				]
			},
			{
				"name":"03110 Chaperones and folding catalysts [BR:cux03110]",
				"children":[
				{
					"name":"CUP3940_0885 clpA; ATP-dependent protease specificity component and chaperone\tK03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA"
				},
				{
					"name":"CUP3940_0280 clpB; ClpB chaperone\tK03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB"
				},
				{
					"name":"CUP3940_0217 clpX; ATP-dependent protease specificity component and chaperone\tK03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX"
				},
				{
					"name":"CUP3940_1329 hslU; heat shock protein HslVU, ATPase subunit\tK03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU"
				},
				{
					"name":"CUP3940_0272 htpG; chaperone protein HtpG\tK04079 HSP90A; molecular chaperone HtpG"
				},
				{
					"name":"CUP3940_0506 dnaK; DnaK system heat shock chaperone\tK04043 dnaK; molecular chaperone DnaK"
				},
				{
					"name":"CUP3940_0961 groEL; 60 kD chaperonin (cpn60)\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]"
				},
				{
					"name":"CUP3940_0493 DnaJ domain-containing protein\tK03686 dnaJ; molecular chaperone DnaJ"
				},
				{
					"name":"CUP3940_1233 dnaJ; DnaK system heat shock co-chaperone\tK03686 dnaJ; molecular chaperone DnaJ"
				},
				{
					"name":"CUP3940_0743 cbpA; co-chaperone-curved DNA binding protein A\tK05516 cbpA; curved DNA-binding protein"
				},
				{
					"name":"CUP3940_0867 djlA; DnaJ-like membrane chaperone protein\tK05801 djlA; DnaJ like chaperone protein"
				},
				{
					"name":"CUP3940_0507 grpE; DnaK system nucleotide exchange factor GrpE\tK03687 GRPE; molecular chaperone GrpE"
				},
				{
					"name":"CUP3940_0962 groES; 10 kD chaperonin (cpn10)\tK04078 groES; chaperonin GroES"
				},
				{
					"name":"CUP3940_0744 htrA; periplasmic heat shock serine protease HtrA, Do family\tK04771 degP; serine protease Do [EC:3.4.21.107]"
				},
				{
					"name":"CUP3940_0558 ftsH1; integral membrane ATP-dependent zinc metallopeptidase\tK03798 ftsH; cell division protease FtsH [EC:3.4.24.-]"
				},
				{
					"name":"CUP3940_1108 ftsH2; integral membrane ATP-dependent zinc metallopeptidase (extracellular domain)\tK03798 ftsH; cell division protease FtsH [EC:3.4.24.-]"
				},
				{
					"name":"CUP3940_0193 atpB; ATP synthase, F0 complex, a subunit\tK02108 ATPF0A; F-type H+-transporting ATPase subunit a"
				},
				{
					"name":"CUP3940_0989 copper chaperone PCu(A)C\tK09796 pccA; periplasmic copper chaperone A"
				},
				{
					"name":"CUP3940_0687 hypA; hydrogenase nickel insertion protein HypA\tK04651 hypA; hydrogenase nickel incorporation protein HypA\/HybF"
				},
				{
					"name":"CUP3940_0689 hypB; hydrogenase nickel insertion protein HypB\tK04652 hypB; hydrogenase nickel incorporation protein HypB"
				},
				{
					"name":"CUP3940_1194 ppiB; peptidyl-prolyl cis-trans isomerase B\tK03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]"
				},
				{
					"name":"CUP3940_0540 putative periplasmic folding chaperone\tK03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]"
				},
				{
					"name":"CUP3940_1570 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase\tK03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]"
				},
				{
					"name":"CUP3940_0264 peb4; major antigenic peptide \/ PpiC-type peptidyl-prolyl cis-trans isomerase\tK03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]"
				},
				{
					"name":"CUP3940_0361 trxA; thioredoxin\tK03671 TXN; thioredoxin"
				},
				{
					"name":"CUP3940_0257 dsbD; thiol:disulfide interchange protein DsbD\tK04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]"
				}
				]
			},
			{
				"name":"04131 Membrane trafficking [BR:cux04131]",
				"children":[
				{
					"name":"CUP3940_1085 ndk; nucleoside diphosphate kinase\tK00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]"
				},
				{
					"name":"CUP3940_1517 gapA; glyceraldehyde 3-phosphate dehydrogenase A\tK00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]"
				},
				{
					"name":"CUP3940_1036 pykF; pyruvate kinase I\tK00873 PK; pyruvate kinase [EC:2.7.1.40]"
				},
				{
					"name":"CUP3940_0272 htpG; chaperone protein HtpG\tK04079 HSP90A; molecular chaperone HtpG"
				}
				]
			},
			{
				"name":"04121 Ubiquitin system"
			},
			{
				"name":"03051 Proteasome [BR:cux03051]",
				"children":[
				{
					"name":"CUP3940_0272 htpG; chaperone protein HtpG\tK04079 HSP90A; molecular chaperone HtpG"
				}
				]
			},
			{
				"name":"03032 DNA replication proteins [BR:cux03032]",
				"children":[
				{
					"name":"CUP3940_0305 rnhA; ribonuclease HI\tK03469 rnhA; ribonuclease HI [EC:3.1.26.4]"
				},
				{
					"name":"CUP3940_0551 type II cytosine-specific DNA methyltransferase\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]"
				},
				{
					"name":"CUP3940_1467 type IIP restriction\/modification system, cytosine-specific DNA methyltransferase\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]"
				},
				{
					"name":"CUP3940_1640 type IIP restriction\/modification system, cytosine-specific DNA methyltransferase\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]"
				},
				{
					"name":"CUP3940_0546 PIF1-like helicase\tK15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]"
				},
				{
					"name":"CUP3940_0992 hup; DNA-binding protein HU\tK03530 hupB; DNA-binding protein HU-beta"
				},
				{
					"name":"CUP3940_0001 dnaA; chromosomal replication initiator protein\tK02313 dnaA; chromosomal replication initiator protein"
				},
				{
					"name":"CUP3940_1075 dnaB; replicative DNA helicase\tK02314 dnaB; replicative DNA helicase [EC:5.6.2.3]"
				},
				{
					"name":"CUP3940_0303 dnaG; DNA primase\tK02316 dnaG; DNA primase [EC:2.7.7.101]"
				},
				{
					"name":"CUP3940_0383 DNA primase\tK02316 dnaG; DNA primase [EC:2.7.7.101]"
				},
				{
					"name":"CUP3940_0429 ssb; single-stranded DNA binding protein\tK03111 ssb; single-strand DNA-binding protein"
				},
				{
					"name":"CUP3940_0040 dnaE; DNA polymerase III, alpha subunit\tK02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0002 dnaN; DNA polymerase III, beta subunit\tK02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0755 holA; DNA polymerase III, delta subunit\tK02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0582 holB; DNA polymerase III, delta prime subunit\tK02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0727 dnaQ; DNA polymerase III, epsilon subunit\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_1065 dnaX; DNA polymerase III, gamma and tau subunits\tK02343 dnaX; DNA polymerase III subunit gamma\/tau [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0135 rnhB; ribonuclease HII\tK03470 rnhB; ribonuclease HII [EC:3.1.26.4]"
				},
				{
					"name":"CUP3940_0584 ligA; DNA ligase, NAD-dependent\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]"
				},
				{
					"name":"CUP3940_0716 type IIP restriction\/modification system, cytosine-specific DNA methyltransferase\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1016 type IIP restriction\/modification system, DNA methyltransferase\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1626 type IIS restriction\/modification system, DNA methyltransferase\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1646 type IIS restriction\/modification system, DNA methyltransferase\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1150 gyrA; DNA gyrase, subunit A\tK02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]"
				},
				{
					"name":"CUP3940_0003 gyrB; DNA gyrase, subunit B\tK02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]"
				},
				{
					"name":"CUP3940_1636 topA; DNA topoisomerase I\tK03168 topA; DNA topoisomerase I [EC:5.6.2.1]"
				}
				]
			},
			{
				"name":"03036 Chromosome and associated proteins [BR:cux03036]",
				"children":[
				{
					"name":"CUP3940_0551 type II cytosine-specific DNA methyltransferase\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]"
				},
				{
					"name":"CUP3940_1467 type IIP restriction\/modification system, cytosine-specific DNA methyltransferase\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]"
				},
				{
					"name":"CUP3940_1640 type IIP restriction\/modification system, cytosine-specific DNA methyltransferase\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]"
				},
				{
					"name":"CUP3940_0306 rnc; ribonuclease III\tK03685 rnc; ribonuclease III [EC:3.1.26.3]"
				},
				{
					"name":"CUP3940_0992 hup; DNA-binding protein HU\tK03530 hupB; DNA-binding protein HU-beta"
				},
				{
					"name":"CUP3940_0743 cbpA; co-chaperone-curved DNA binding protein A\tK05516 cbpA; curved DNA-binding protein"
				},
				{
					"name":"CUP3940_0001 dnaA; chromosomal replication initiator protein\tK02313 dnaA; chromosomal replication initiator protein"
				},
				{
					"name":"CUP3940_0024 DNA-binding ferritin-like protein\tK04047 dps; starvation-inducible DNA-binding protein"
				},
				{
					"name":"CUP3940_0539 ftsA; cell division protein FtsA\tK03590 ftsA; cell division protein FtsA"
				},
				{
					"name":"CUP3940_1185 ftsE; cell division ATP-binding protein FtsE\tK09812 ftsE; cell division transport system ATP-binding protein"
				},
				{
					"name":"CUP3940_0753 ftsI; cell division protein FtsI \/ penicillin-binding protein\tK03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]"
				},
				{
					"name":"CUP3940_0684 ftsK; DNA segregation ATPase FtsK\/SpoIIIE\tK03466 ftsK; DNA segregation ATPase FtsK\/SpoIIIE, S-DNA-T family"
				},
				{
					"name":"CUP3940_0489 ftsW; cell division protein, FtsW\/RodA\/SpoVE family\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]"
				},
				{
					"name":"CUP3940_1184 ftsX; cell division protein FtsX\tK09811 ftsX; cell division transport system permease protein"
				},
				{
					"name":"CUP3940_0494 ftsZ; cell division protein FtsZ\tK03531 ftsZ; cell division protein FtsZ"
				},
				{
					"name":"CUP3940_1177 amiA; N-acetylmuramoyl-L-alanine amidase\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]"
				},
				{
					"name":"CUP3940_0605 cmeE; multidrug efflux system CmeDEF, membrane fusion component CmeE\tK03585 acrA; membrane fusion protein, multidrug efflux system"
				},
				{
					"name":"CUP3940_0919 cmeA; multidrug efflux system CmeABC, periplasmic fusion protein CmeA\tK03585 acrA; membrane fusion protein, multidrug efflux system"
				},
				{
					"name":"CUP3940_0218 mrdB; cell wall shape-determining protein\tK03569 mreB; rod shape-determining protein MreB and related proteins"
				},
				{
					"name":"CUP3940_0219 mreC; rod shape-determining protein MreC\tK03570 mreC; rod shape-determining protein MreC"
				},
				{
					"name":"CUP3940_1189 rodA; rod shape-determining protein\tK05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]"
				},
				{
					"name":"CUP3940_1588 parA; chromosome partitioning protein\tK03496 parA; chromosome partitioning protein"
				},
				{
					"name":"CUP3940_1587 parB; chromosome partitioning protein\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein"
				},
				{
					"name":"CUP3940_1210 mnmG; 5-carboxymethylaminomethyluridine-tRNA synthase MnmEG, MnmG component\tK03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme"
				},
				{
					"name":"CUP3940_0295 rsmG; 16S rRNA m7G527 methyltransferase\tK03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]"
				},
				{
					"name":"CUP3940_0803 xerH; integrase \/ recombinase\tK04763 xerD; integrase\/recombinase XerD"
				},
				{
					"name":"CUP3940_0319 mrp; ATP\/GTP-binding protein\tK03593 mrp; ATP-binding protein involved in chromosome partitioning"
				},
				{
					"name":"CUP3940_0833 engB; ribosome biogenesis GTP-binding protein YsxC\/EngB\tK03978 engB; GTP-binding protein"
				}
				]
			},
			{
				"name":"03400 DNA repair and recombination proteins [BR:cux03400]",
				"children":[
				{
					"name":"CUP3940_0069 ung; uracil-DNA glycosylase, family 1\tK03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]"
				},
				{
					"name":"CUP3940_0074 mutY; A\/G-specific adenine glycosylase\tK03575 mutY; A\/G-specific adenine glycosylase [EC:3.2.2.31]"
				},
				{
					"name":"CUP3940_0265 nth; endonuclease III\tK10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]"
				},
				{
					"name":"CUP3940_0876 uracil-DNA glycosylase, family 4\tK21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]"
				},
				{
					"name":"CUP3940_0159 xth; exodeoxyribonuclease III (exonuclease III)\tK01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]"
				},
				{
					"name":"CUP3940_0246 recJ; single-stranded DNA-specific exonuclease\tK07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]"
				},
				{
					"name":"CUP3940_0584 ligA; DNA ligase, NAD-dependent\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]"
				},
				{
					"name":"CUP3940_0445 uvrA; UvrABC nucleotide excision repair complex, subunit UvrA\tK03701 uvrA; excinuclease ABC subunit A"
				},
				{
					"name":"CUP3940_0514 uvrB; UvrABC nucleotide excision repair complex, subunit UvrB\tK03702 uvrB; excinuclease ABC subunit B"
				},
				{
					"name":"CUP3940_1255 uvrC; UvrABC nucleotide excision repair complex, subunit UvrC\tK03703 uvrC; excinuclease ABC subunit C"
				},
				{
					"name":"CUP3940_0894 UvrD\/REP family helicase\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]"
				},
				{
					"name":"CUP3940_1237 rep; ATP-dependent DNA helicase\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]"
				},
				{
					"name":"CUP3940_1294 rpoB; DNA-directed RNA polymerase, beta subunit\tK03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]"
				},
				{
					"name":"CUP3940_1293 rpoC; DNA-directed RNA polymerase, beta' subunit\tK03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]"
				},
				{
					"name":"CUP3940_1369 rpoA; DNA-directed RNA polymerase, alpha subunit\tK03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]"
				},
				{
					"name":"CUP3940_1181 rpoZ; DNA-directed RNA polymerase, omega subunit\tK03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]"
				},
				{
					"name":"CUP3940_0598 mfd; transcription-repair coupling factor\tK03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]"
				},
				{
					"name":"CUP3940_0883 mutS2; DNA mismatch binding protein, MutS2 family\tK07456 mutS2; DNA mismatch repair protein MutS2"
				},
				{
					"name":"CUP3940_1091 xseA; exodeoxyribonuclease VII, large subunit\tK03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]"
				},
				{
					"name":"CUP3940_0437 xseB; exodeoxyribonuclease VII, small subunit\tK03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]"
				},
				{
					"name":"CUP3940_0040 dnaE; DNA polymerase III, alpha subunit\tK02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0002 dnaN; DNA polymerase III, beta subunit\tK02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0755 holA; DNA polymerase III, delta subunit\tK02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0582 holB; DNA polymerase III, delta prime subunit\tK02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0727 dnaQ; DNA polymerase III, epsilon subunit\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_1065 dnaX; DNA polymerase III, gamma and tau subunits\tK02343 dnaX; DNA polymerase III subunit gamma\/tau [EC:2.7.7.7]"
				},
				{
					"name":"CUP3940_0429 ssb; single-stranded DNA binding protein\tK03111 ssb; single-strand DNA-binding protein"
				},
				{
					"name":"CUP3940_0716 type IIP restriction\/modification system, cytosine-specific DNA methyltransferase\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1016 type IIP restriction\/modification system, DNA methyltransferase\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1626 type IIS restriction\/modification system, DNA methyltransferase\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1646 type IIS restriction\/modification system, DNA methyltransferase\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1556 recA; recombinase\tK03553 recA; recombination protein RecA"
				},
				{
					"name":"CUP3940_0471 ruvA; RuvABC resolvasome, subunit RuvA\tK03550 ruvA; holliday junction DNA helicase RuvA"
				},
				{
					"name":"CUP3940_0474 ruvB; RuvABC resolvasome, subunit RuvB\tK03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]"
				},
				{
					"name":"CUP3940_1648 ruvC; RuvABC resolvasome, subunit RuvC\tK01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]"
				},
				{
					"name":"CUP3940_0510 priA; primosomal protein N'\tK04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]"
				},
				{
					"name":"CUP3940_0373 RecA family protein\tK04485 radA; DNA repair protein RadA\/Sms"
				},
				{
					"name":"CUP3940_1420 radA; DNA repair and recombination protein\tK04485 radA; DNA repair protein RadA\/Sms"
				},
				{
					"name":"CUP3940_1114 recG; ATP-dependent DNA helicase\tK03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]"
				},
				{
					"name":"CUP3940_0457 recR; recombination protein\tK06187 recR; recombination protein RecR"
				},
				{
					"name":"CUP3940_0841 recN; DNA repair protein RecN\tK03631 recN; DNA repair protein RecN (Recombination protein N)"
				},
				{
					"name":"CUP3940_1150 gyrA; DNA gyrase, subunit A\tK02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]"
				},
				{
					"name":"CUP3940_0003 gyrB; DNA gyrase, subunit B\tK02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]"
				},
				{
					"name":"CUP3940_1636 topA; DNA topoisomerase I\tK03168 topA; DNA topoisomerase I [EC:5.6.2.1]"
				},
				{
					"name":"CUP3940_0992 hup; DNA-binding protein HU\tK03530 hupB; DNA-binding protein HU-beta"
				},
				{
					"name":"CUP3940_1614 nrdA; aerobic ribonucleoside-diphosphate reductase Ia, B1 protein subunit NrdA\tK00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]"
				},
				{
					"name":"CUP3940_0147 nrdB; aerobic ribonucleoside-diphosphate reductase Ia, B2 protein subunit NrdB\tK00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]"
				}
				]
			},
			{
				"name":"03029 Mitochondrial biogenesis [BR:cux03029]",
				"children":[
				{
					"name":"CUP3940_1208 petB; ubiquinol cytochrome c oxidoreductase PetABC, cytochrome b subunit\tK00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit"
				},
				{
					"name":"CUP3940_1401 infB; translation initiation factor IF-2\tK02519 infB; translation initiation factor IF-2"
				},
				{
					"name":"CUP3940_1630 infC; translation initiation factor IF-3\tK02520 infC; translation initiation factor IF-3"
				},
				{
					"name":"CUP3940_1205 tsf; translation elongation factor EF-Ts\tK02357 tsf; elongation factor Ts"
				},
				{
					"name":"CUP3940_1303 tuf; translation elongation factor Tu\tK02358 tuf; elongation factor Tu"
				},
				{
					"name":"CUP3940_1287 fusA; translation elongation factor EF-G\tK02355 fusA; elongation factor G"
				},
				{
					"name":"CUP3940_1328 era; GTP-binding protein\tK03595 era; GTPase"
				},
				{
					"name":"CUP3940_1179 tyrS; tyrosyl-tRNA synthetase\tK01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]"
				},
				{
					"name":"CUP3940_0592 leuS; leucyl-tRNA synthetase\tK01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]"
				},
				{
					"name":"CUP3940_0843 aspS; aspartyl-tRNA synthetase\tK01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]"
				},
				{
					"name":"CUP3940_1199 argS; arginyl-tRNA synthetase\tK01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]"
				},
				{
					"name":"CUP3940_0435 gatA; Glu-tRNA(Gln) amidotransferase, subunit A\tK02433 gatA; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]"
				},
				{
					"name":"CUP3940_0178 gatB; Glu-tRNA(Gln) amidotransferase, subunit B\tK02434 gatB; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]"
				},
				{
					"name":"CUP3940_1042 gatC; Glu-tRNA(Gln) amidotransferase, subunit C\tK02435 gatC; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]"
				},
				{
					"name":"CUP3940_0266 DNA\/RNA endonuclease G\tK01173 ENDOG; endonuclease G, mitochondrial"
				},
				{
					"name":"CUP3940_0546 PIF1-like helicase\tK15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]"
				},
				{
					"name":"CUP3940_0429 ssb; single-stranded DNA binding protein\tK03111 ssb; single-strand DNA-binding protein"
				},
				{
					"name":"CUP3940_1394 beta-barrel assembly machinery complex, BamA\/YaeT protein\tK07277 SAM50; outer membrane protein insertion porin family"
				},
				{
					"name":"CUP3940_0506 dnaK; DnaK system heat shock chaperone\tK04043 dnaK; molecular chaperone DnaK"
				},
				{
					"name":"CUP3940_0507 grpE; DnaK system nucleotide exchange factor GrpE\tK03687 GRPE; molecular chaperone GrpE"
				},
				{
					"name":"CUP3940_0961 groEL; 60 kD chaperonin (cpn60)\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]"
				},
				{
					"name":"CUP3940_0962 groES; 10 kD chaperonin (cpn10)\tK04078 groES; chaperonin GroES"
				},
				{
					"name":"CUP3940_0493 DnaJ domain-containing protein\tK03686 dnaJ; molecular chaperone DnaJ"
				},
				{
					"name":"CUP3940_1233 dnaJ; DnaK system heat shock co-chaperone\tK03686 dnaJ; molecular chaperone DnaJ"
				},
				{
					"name":"CUP3940_0026 iscS; cysteine desulfurase\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]"
				},
				{
					"name":"CUP3940_0319 mrp; ATP\/GTP-binding protein\tK03593 mrp; ATP-binding protein involved in chromosome partitioning"
				},
				{
					"name":"CUP3940_0871 oxaA; membrane protein insertase, YidC\/Oxa1 family\tK03217 yidC; YidC\/Oxa1 family membrane protein insertase"
				},
				{
					"name":"CUP3940_0991 cytochrome oxidase copper insertion factor, SCO1\/SenC\/PrrC family\tK07152 SCO1; protein SCO1"
				},
				{
					"name":"CUP3940_0272 htpG; chaperone protein HtpG\tK04079 HSP90A; molecular chaperone HtpG"
				}
				]
			}
			]
		},
		{
			"name":"09183 Protein families: signaling and cellular processes",
			"children":[
			{
				"name":"02000 Transporters [BR:cux02000]",
				"children":[
				{
					"name":"CUP3940_1166 msbA; lipid A export ATP-binding\/permease protein\tK11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]"
				},
				{
					"name":"CUP3940_1141 pglK; flippase\tK24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]"
				},
				{
					"name":"CUP3940_0572 macB; macrolide-specific efflux protein, ATP-binding\/permease protein MacB\tK05685 macB; macrolide transport system ATP-binding\/permease protein [EC:7.6.2.-]"
				},
				{
					"name":"CUP3940_0984 ABC transporter, ATP-binding protein\tK15738 uup; ABC transport system ATP-binding\/permease protein"
				},
				{
					"name":"CUP3940_0696 modA; molybdenum ABC transporter ModABC, periplasmic molybdate-binding protein\tK02020 modA; molybdate transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_0698 modB; molybdenum ABC transporter ModABC, permease protein\tK02018 modB; molybdate transport system permease protein"
				},
				{
					"name":"CUP3940_0699 modC; molybdenum ABC transporter ModABC, ATP-binding protein\tK02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]"
				},
				{
					"name":"CUP3940_0195 ABC transporter, periplasmic substrate-binding protein\tK05772 tupA; tungstate transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_1266 tupA; tungsten ABC transporter TupABC, periplasmic tungstate-binding protein\tK05772 tupA; tungstate transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_1267 tupB; tungsten ABC transporter TupABC, permease protein\tK05773 tupB; tungstate transport system permease protein"
				},
				{
					"name":"CUP3940_1268 tupC; tungsten ABC transporter TupABC, ATP-binding protein\tK06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]"
				},
				{
					"name":"CUP3940_1414 mlaD; lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaD\tK02067 mlaD; phospholipid\/cholesterol\/gamma-HCH transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_1412 mlaE; lipid asymmetry ABC transporter MlaABCDEF, permease component MlaE\tK02066 mlaE; phospholipid\/cholesterol\/gamma-HCH transport system permease protein"
				},
				{
					"name":"CUP3940_1413 mlaF; lipid asymmetry ABC transporter MlaABCDEF, ATPase component MlaF\tK02065 mlaF; phospholipid\/cholesterol\/gamma-HCH transport system ATP-binding protein"
				},
				{
					"name":"CUP3940_1415 putative lipid asymmetry ABC transporter MlaABCDEF component MlaB\tK18480 linN; cholesterol transport system auxiliary component"
				},
				{
					"name":"CUP3940_1276 mlaC; lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaC\tK07323 mlaC; phospholipid transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_0717 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein\tK02040 pstS; phosphate transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_0718 pstC; phosphate ABC transporter, permease protein\tK02037 pstC; phosphate transport system permease protein"
				},
				{
					"name":"CUP3940_0719 pstA; phosphate ABC transporter, permease protein\tK02038 pstA; phosphate transport system permease protein"
				},
				{
					"name":"CUP3940_0720 pstB; phosphate ABC transporter, ATP-binding protein\tK02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]"
				},
				{
					"name":"CUP3940_0502 amino acid ABC transporter, periplasmic amino acid-binding protein\tK10039 peb1A; aspartate\/glutamate\/glutamine transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_0500 amino acid ABC transporter, permease protein\tK10040 peb1B; aspartate\/glutamate\/glutamine transport system permease protein"
				},
				{
					"name":"CUP3940_0501 amino acid ABC transporter, permease protein\tK10040 peb1B; aspartate\/glutamate\/glutamine transport system permease protein"
				},
				{
					"name":"CUP3940_0503 amino acid ABC transporter, ATP-binding protein\tK10041 peb1C; aspartate\/glutamate\/glutamine transport system ATP-binding protein [EC:7.4.2.1]"
				},
				{
					"name":"CUP3940_0229 cjaC; amino acid ABC transporter, periplasmic arginine\/lysine\/histidine-binding lipoprotein\tK23059 artP; arginine\/lysine\/histidine transporter system substrate-binding protein"
				},
				{
					"name":"CUP3940_0854 amino acid ABC transporter, permease protein\tK17077 artQ; arginine\/lysine\/histidine transport system permease protein"
				},
				{
					"name":"CUP3940_0853 amino acid ABC transporter, ATP-binding protein\tK23060 artR; arginine\/lysine\/histidine transport system ATP-binding protein [EC:7.4.2.1]"
				},
				{
					"name":"CUP3940_0480 livJ; high-affinity branched-chain amino acid transporter, periplasmic Leu\/Ile\/Val-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_0481 livK; high-affinity branched-chain amino acid ABC transporter, periplasmic Leu\/Ile\/Val-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_0482 livH; high-affinity branched-chain amino acid ABC transporter, permease protein\tK01997 livH; branched-chain amino acid transport system permease protein"
				},
				{
					"name":"CUP3940_0483 livM; high-affinity branched-chain amino acid ABC transporter, permease protein\tK01998 livM; branched-chain amino acid transport system permease protein"
				},
				{
					"name":"CUP3940_0484 livG; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein\tK01995 livG; branched-chain amino acid transport system ATP-binding protein"
				},
				{
					"name":"CUP3940_0485 livF; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein\tK01996 livF; branched-chain amino acid transport system ATP-binding protein"
				},
				{
					"name":"CUP3940_1242 metQ1; DL-methionine ABC transporter MetINQ, substrate-binding protein\tK02073 metQ; D-methionine transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_1243 metQ2; DL-methionine ABC transporter MetINQ, substrate-binding protein\tK02073 metQ; D-methionine transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_1244 metQ3; DL-methionine ABC transporter MetINQ, substrate-binding protein\tK02073 metQ; D-methionine transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_1241 metI; DL-methionine ABC transporter MetINQ, permease protein\tK02072 metI; D-methionine transport system permease protein"
				},
				{
					"name":"CUP3940_1240 metN; DL-methionine ABC transporter MetINQ, ATP-binding protein\tK02071 metN; D-methionine transport system ATP-binding protein"
				},
				{
					"name":"CUP3940_1078 cjaA; amino acid ABC transporter, periplasmic cysteine-binding protein\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_1310 amino acid ABC transporter, permease protein\tK02029 ABC.PA.P; polar amino acid transport system permease protein"
				},
				{
					"name":"CUP3940_1311 papP; pathogenesis-associated glutamine ABC transporter, permease protein\tK02029 ABC.PA.P; polar amino acid transport system permease protein"
				},
				{
					"name":"CUP3940_1309 papQ; pathogenesis-associated glutamine ABC transporter, ATP-binding protein\tK02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]"
				},
				{
					"name":"CUP3940_0323 nikA; nickel ABC transporter, periplasmic substrate-binding protein\tK25103 nikZ; nickel transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_0324 nikB; nickel ABC transporter, permease protein\tK25104 nikY; nickel transport system permease protein"
				},
				{
					"name":"CUP3940_0325 nikC; nickel ABC transporter, permease protein\tK25105 nikX; nickel transport system permease protein"
				},
				{
					"name":"CUP3940_0326 nikD; nickel ABC transporter, ATP-binding protein\tK25106 nikW; nickel transport system ATP-binding protein [EC:7.2.2.11]"
				},
				{
					"name":"CUP3940_0327 nikE; nickel ABC transporter, ATP-binding protein\tK25107 nikV; nickel transport system ATP-binding protein [EC:7.2.2.11]"
				},
				{
					"name":"CUP3940_0210 iron ABC transporter, periplasmic iron-binding protein\tK02016 ABC.FEV.S; iron complex transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_0209 iron ABC transporter, permease protein\tK02015 ABC.FEV.P; iron complex transport system permease protein"
				},
				{
					"name":"CUP3940_0208 iron ABC transporter, ATP-binding protein\tK02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]"
				},
				{
					"name":"CUP3940_1122 chuD; heme ABC transporter ChuBCD, periplasmic substrate-binding protein\tK25034 btuF; cobalamin transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_1120 chuB; heme ABC transporter ChuBCD, permease protein\tK25027 btuC; cobalamin transport system permease protein"
				},
				{
					"name":"CUP3940_1121 chuC; heme ABC transporter ChuBCD, ATP-binding protein\tK25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]"
				},
				{
					"name":"CUP3940_0237 znuA; zinc ABC transporter, periplasmic substrate-binding protein\tK09815 znuA; zinc transport system substrate-binding protein"
				},
				{
					"name":"CUP3940_0235 znuB; zinc ABC transporter, integral membrane protein\tK09816 znuB; zinc transport system permease protein"
				},
				{
					"name":"CUP3940_0236 znuC; zinc ABC transporter, ATP-binding protein\tK09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]"
				},
				{
					"name":"CUP3940_0665 kpsM; capsular polysaccharide export system, permease protein\tK09688 kpsM; capsular polysaccharide transport system permease protein"
				},
				{
					"name":"CUP3940_0663 kpsE; capsular polysaccharide export system, inner membrane protein\tK10107 kpsE; capsular polysaccharide transport system permease protein"
				},
				{
					"name":"CUP3940_0664 kpsT; capsular polysaccharide export system, ATP-binding cassette component\tK09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]"
				},
				{
					"name":"CUP3940_0770 lptF; lipooligosaccharide transport system, ABC transporter permease component LptF\tK07091 lptF; lipopolysaccharide export system permease protein"
				},
				{
					"name":"CUP3940_0537 lptG; lipooligosaccharide transport system, ABC transporter permease component LptG\tK11720 lptG; lipopolysaccharide export system permease protein"
				},
				{
					"name":"CUP3940_0848 lptB; lipooligosaccharide transport system, ABC transporter ATP-binding component LptB\tK06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]"
				},
				{
					"name":"CUP3940_0552 lolC; lipoprotein releasing system, transmembrane protein, LolC\/E family\tK09808 lolC_E_F; lipoprotein-releasing system permease protein"
				},
				{
					"name":"CUP3940_1204 ABC transporter, ATP-binding protein\tK09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]"
				},
				{
					"name":"CUP3940_1184 ftsX; cell division protein FtsX\tK09811 ftsX; cell division transport system permease protein"
				},
				{
					"name":"CUP3940_1185 ftsE; cell division ATP-binding protein FtsE\tK09812 ftsE; cell division transport system ATP-binding protein"
				},
				{
					"name":"CUP3940_1023 sodium:dicarboxylate cotransporter (permease SLC13 domain)\tK14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2\/3\/5"
				},
				{
					"name":"CUP3940_0655 MATE family efflux protein\tK26937 dinF; MATE family, multidrug efflux pump"
				},
				{
					"name":"CUP3940_0033 metabolite:proton symporter, major facilitator superfamily\tK03762 proP; MFS transporter, MHS family, proline\/betaine transporter"
				},
				{
					"name":"CUP3940_1323 cynX; cyanate permease\tK03449 MFS.CP; MFS transporter, CP family, cyanate transporter"
				},
				{
					"name":"CUP3940_1404 drug resistance transporter, Bcr\/CflA family\tK07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein"
				},
				{
					"name":"CUP3940_0152 BAX inhibitor (BI)-1 like protein (UPF0005 domain)\tK19416 yccA; modulator of FtsH protease"
				},
				{
					"name":"CUP3940_0154 mechanosensitive ion channel family protein\tK16052 ynaI; MscS family membrane protein"
				},
				{
					"name":"CUP3940_1231 motA; flagellar motor stator protein\tK02556 motA; chemotaxis protein MotA"
				},
				{
					"name":"CUP3940_1232 motB; flagellar motor stator protein\tK02557 motB; chemotaxis protein MotB"
				},
				{
					"name":"CUP3940_1125 exbB; TonB system transport protein ExbB\tK03561 exbB; biopolymer transport protein ExbB"
				},
				{
					"name":"CUP3940_1124 exbD; TonB system transport protein ExbD\tK03559 exbD; biopolymer transport protein ExbD"
				},
				{
					"name":"CUP3940_1578 tolR; Tol-Pal system subunit TolR\tK03559 exbD; biopolymer transport protein ExbD"
				},
				{
					"name":"CUP3940_0816 corAI; magnesium and cobalt transport protein\tK03284 corA; magnesium transporter"
				},
				{
					"name":"CUP3940_0161 HlyC\/CorC family transporter\tK03699 tlyC; magnesium and cobalt exporter, CNNM family"
				},
				{
					"name":"CUP3940_0125 cadF; outer membrane fibronectin-binding protein\tK03286 TC.OOP; OmpA-OmpF porin, OOP family"
				},
				{
					"name":"CUP3940_1119 chuA; heme uptake system outer membrane receptor\tK02014 TC.FEV.OM; iron complex outermembrane recepter protein"
				},
				{
					"name":"CUP3940_0606 cmeD; multidrug efflux system CmeDEF, outer membrane component CmeD\tK12340 tolC; outer membrane protein"
				},
				{
					"name":"CUP3940_0921 cmeC; multidrug efflux system CmeABC, outer membrane lipoprotein CmeC\tK18139 oprM; outer membrane protein, multidrug efflux system"
				},
				{
					"name":"CUP3940_1394 beta-barrel assembly machinery complex, BamA\/YaeT protein\tK07277 SAM50; outer membrane protein insertion porin family"
				},
				{
					"name":"CUP3940_0422 beta-barrel assembly machinery complex, BamD\/YfiO lipoprotein\tK05807 bamD; outer membrane protein assembly factor BamD"
				},
				{
					"name":"CUP3940_0834 lptA; lipooligosaccharide transport system, periplasmic component LptA\tK09774 lptA; lipopolysaccharide export system protein LptA"
				},
				{
					"name":"CUP3940_1012 lptD; lipooligosaccharide transport system, OM translocon component LptD\tK04744 lptD; LPS-assembly protein"
				},
				{
					"name":"CUP3940_0089 divalent metal cation transporter\tK16264 czcD; cobalt-zinc-cadmium efflux system protein"
				},
				{
					"name":"CUP3940_0748 divalent metal cation transporter (ZT_dimer domain)\tK13283 fieF; ferrous-iron efflux pump FieF"
				},
				{
					"name":"CUP3940_0604 cmeF; multidrug efflux system CmeDEF, integral membrane component CmeF\tK18138 acrB; multidrug efflux pump"
				},
				{
					"name":"CUP3940_0920 cmeB; multidrug efflux system CmeABC, inner membrane drug transporter CmeB\tK18138 acrB; multidrug efflux pump"
				},
				{
					"name":"CUP3940_0902 multidrug efflux system protein, EmrE family\tK18924 ykkC; paired small multidrug resistance pump"
				},
				{
					"name":"CUP3940_0901 multidrug efflux system protein, EmrE family\tK18925 ykkD; paired small multidrug resistance pump"
				},
				{
					"name":"CUP3940_0860 multidrug efflux system protein, EmrE family\tK11742 mdtI; spermidine export protein MdtI"
				},
				{
					"name":"CUP3940_0861 multidrug efflux system protein, EmrE family\tK11743 mdtJ; spermidine export protein MdtJ"
				},
				{
					"name":"CUP3940_0070 YuiF family protein, putative amino acid transporter\tK07084 yuiF; putative amino acid transporter"
				},
				{
					"name":"CUP3940_0067 anaerobic C4-dicarboxylate transporter, DcuA\/DcuB family\tK07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA"
				},
				{
					"name":"CUP3940_0516 anaerobic C4-dicarboxylate transporter, DcuA\/DcuB family\tK07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB"
				},
				{
					"name":"CUP3940_0623 lctP; L-lactate permease\tK03303 lutP; lactate permease"
				},
				{
					"name":"CUP3940_0309 tellurite-resistance\/dicarboxylate transporter (TDT) family protein\tK03304 tehA; tellurite resistance protein"
				},
				{
					"name":"CUP3940_1550 putP; sodium:proline symporter\tK11928 putP; sodium\/proline symporter"
				},
				{
					"name":"CUP3940_0008 actP; acetate permease\tK14393 actP; cation\/acetate symporter"
				},
				{
					"name":"CUP3940_1214 dctA; C4-dicarboxylate transport protein\tK11103 dctA; aerobic C4-dicarboxylate transport protein"
				},
				{
					"name":"CUP3940_0898 sstT; sodium ion-motive force-driven serine\/threonine transporter\tK07862 sstT; serine\/threonine transporter"
				},
				{
					"name":"CUP3940_0615 nhaA2; sodium:proton antiporter\tK03313 nhaA; Na+:H+ antiporter, NhaA family"
				},
				{
					"name":"CUP3940_0616 nhaA1; sodium:proton antiporter\tK03313 nhaA; Na+:H+ antiporter, NhaA family"
				},
				{
					"name":"CUP3940_0741 kefB; glutathione-regulated potassium-efflux system protein, KefB\/KefC family\tK03455 KEA1_2_3; K+:H+ antiporter"
				},
				{
					"name":"CUP3940_0082 ktrB; potassium transporter KtrAB, KtrB subunit\tK03498 trkH; trk\/ktr system potassium uptake protein"
				},
				{
					"name":"CUP3940_0083 ktrA; potassium transporter KtrAB, KtrA subunit\tK03499 trkA; trk\/ktr system potassium uptake protein"
				},
				{
					"name":"CUP3940_1279 xanthine\/uracil\/vitamin C permease\tK06901 pbuG; adenine\/guanine\/hypoxanthine permease"
				},
				{
					"name":"CUP3940_0163 sdaC; L-serine transporter\tK03837 sdaC; serine transporter"
				},
				{
					"name":"CUP3940_0269 sodium:phosphate symporter\tK03324 yjbB; phosphate:Na+ symporter"
				},
				{
					"name":"CUP3940_1225 arsB; arsenical pump membrane protein\tK03893 arsB; arsenical pump membrane protein"
				},
				{
					"name":"CUP3940_0809 anaerobic C4-dicarboxylate transporter, DcuC family\tK03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family"
				},
				{
					"name":"CUP3940_1384 anaerobic C4-dicarboxylate transporter, DcuC family\tK03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family"
				},
				{
					"name":"CUP3940_1168 murJ; lipid II flippase\tK03980 murJ; putative peptidoglycan lipid II flippase"
				},
				{
					"name":"CUP3940_1633 cptA; oligopeptide transporter, OPT family\tK28868 K28868; oligopeptide transporter family protein"
				},
				{
					"name":"CUP3940_0053 transporter, LysE family\tK06895 lysE; L-lysine exporter family protein LysE\/ArgO"
				},
				{
					"name":"CUP3940_0821 transporter, LysE family\tK05834 rhtB; homoserine\/homoserine lactone efflux protein"
				},
				{
					"name":"CUP3940_0823 branched-chain amino acid transport protein, AzlC family\tK26605 azlC; branched chain amino acid efflux pump"
				},
				{
					"name":"CUP3940_0822 branched-chain amino acid transport protein, AzlD family\tK26606 azlD; branched chain amino acid efflux pump"
				},
				{
					"name":"CUP3940_1103 MarC family membrane protein\tK05595 marC; multiple antibiotic resistance protein"
				},
				{
					"name":"CUP3940_0489 ftsW; cell division protein, FtsW\/RodA\/SpoVE family\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]"
				},
				{
					"name":"CUP3940_0160 manganese efflux pump MntP\tK23242 mntP; manganese efflux pump family protein"
				},
				{
					"name":"CUP3940_0996 cstA; carbon starvation protein A\tK06200 cstA; carbon starvation protein"
				},
				{
					"name":"CUP3940_1123 tonB; energy transduction protein TonB\tK03832 tonB; periplasmic protein TonB"
				},
				{
					"name":"CUP3940_1577 tolA; Tol-Pal system subunit TolA\tK03832 tonB; periplasmic protein TonB"
				},
				{
					"name":"CUP3940_1572 pal; Tol-Pal system peptidoglycan-associated lipoprotein\tK03640 pal; peptidoglycan-associated lipoprotein"
				},
				{
					"name":"CUP3940_1573 tolB; Tol-Pal system translocation protein TolB\tK03641 tolB; TolB protein"
				},
				{
					"name":"CUP3940_0605 cmeE; multidrug efflux system CmeDEF, membrane fusion component CmeE\tK03585 acrA; membrane fusion protein, multidrug efflux system"
				},
				{
					"name":"CUP3940_0919 cmeA; multidrug efflux system CmeABC, periplasmic fusion protein CmeA\tK03585 acrA; membrane fusion protein, multidrug efflux system"
				},
				{
					"name":"CUP3940_0571 macA; macrolide-specific efflux protein, membrane fusion protein MacA\tK13888 macA; membrane fusion protein, macrolide-specific efflux system"
				},
				{
					"name":"CUP3940_1523 feoA; ferrous iron transport protein A\tK04758 feoA; ferrous iron transport protein A"
				},
				{
					"name":"CUP3940_1522 feoB; ferrous iron transport protein B\tK04759 feoB; ferrous iron transport protein B"
				},
				{
					"name":"CUP3940_0145 long-chain fatty acid ABC transporter, fused permease and ATPase components, SbmA family\tK17938 sbmA; peptide\/bleomycin uptake transporter"
				}
				]
			},
			{
				"name":"02044 Secretion system [BR:cux02044]",
				"children":[
				{
					"name":"CUP3940_0606 cmeD; multidrug efflux system CmeDEF, outer membrane component CmeD\tK12340 tolC; outer membrane protein"
				},
				{
					"name":"CUP3940_0098 ctsD; transformation system protein CtsD\tK02453 gspD; general secretion pathway protein D"
				},
				{
					"name":"CUP3940_0095 ctsE; transformation system, ATPase CtsE\tK02454 gspE; general secretion pathway protein E [EC:7.4.2.8]"
				},
				{
					"name":"CUP3940_0094 ctsF; transformation system, membrane protein CtsF\tK02455 gspF; general secretion pathway protein F"
				},
				{
					"name":"CUP3940_0769 peptidase A24 N-terminal domain-containing protein, putative prepilin signal peptidase\tK02654 pilD; leader peptidase (prepilin peptidase) \/ N-methyltransferase [EC:3.4.23.43 2.1.1.-]"
				},
				{
					"name":"CUP3940_0784 YggT family membrane protein\tK02221 yggT; YggT family protein"
				},
				{
					"name":"CUP3940_0603 competence protein, ComEA family\tK02237 comEA; competence protein ComEA"
				},
				{
					"name":"CUP3940_1376 competence protein, ComEC family\tK02238 comEC; competence protein ComEC"
				},
				{
					"name":"CUP3940_1151 ctsW; transformation system, predicted amidophosphoribosyltransferase CtsW\tK02242 comFC; competence protein ComFC"
				},
				{
					"name":"CUP3940_0799 flhA; flagellar export apparatus, transmembrane gate complex, FlhA component\tK02400 flhA; flagellar biosynthesis protein FlhA"
				},
				{
					"name":"CUP3940_1081 flhB; flagellar export apparatus, transmembrane gate complex, FlhB component\tK02401 flhB; flagellar biosynthesis protein FlhB"
				},
				{
					"name":"CUP3940_1127 flhB2; FlhB C-terminus-related protein\tK04061 flhB2; flagellar biosynthesis protein"
				},
				{
					"name":"CUP3940_1098 fliF; flagellar inner membrane MS-ring protein FliF\tK02409 fliF; flagellar M-ring protein FliF"
				},
				{
					"name":"CUP3940_1096 fliH; flagellar export apparatus, cytoplasmic ATPase complex, FliH component\tK02411 fliH; flagellar assembly protein FliH"
				},
				{
					"name":"CUP3940_1388 fliI; flagellar export apparatus, cytoplasmic ATPase complex, FliI component\tK02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]"
				},
				{
					"name":"CUP3940_0640 fliY; flagellar motor switch C-ring protein FliY\tK02417 fliN; flagellar motor switch protein FliN"
				},
				{
					"name":"CUP3940_0910 fliN; flagellar motor switch C-ring protein FliN\tK02417 fliN; flagellar motor switch protein FliN"
				},
				{
					"name":"CUP3940_0763 fliP; flagellar export apparatus, transmembrane gate complex, FliP component\tK02419 fliP; flagellar biosynthesis protein FliP"
				},
				{
					"name":"CUP3940_1558 fliQ; flagellar export apparatus, transmembrane gate complex, FliQ component\tK02420 fliQ; flagellar biosynthesis protein FliQ"
				},
				{
					"name":"CUP3940_1203 fliR; flagellar export apparatus, transmembrane gate complex, FliR component\tK02421 fliR; flagellar biosynthesis protein FliR"
				},
				{
					"name":"CUP3940_0549 secA; preprotein translocase, SecA subunit\tK03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]"
				},
				{
					"name":"CUP3940_0590 secD; protein-export membrane protein SecD\tK03072 secD; preprotein translocase subunit SecD"
				},
				{
					"name":"CUP3940_1300 secE; preprotein translocase SecYEG, SecE subunit\tK03073 secE; preprotein translocase subunit SecE"
				},
				{
					"name":"CUP3940_0591 secF; protein-export membrane protein SecF\tK03074 secF; preprotein translocase subunit SecF"
				},
				{
					"name":"CUP3940_0151 secG; preprotein translocase SecYEG, SecG subunit\tK03075 secG; preprotein translocase subunit SecG"
				},
				{
					"name":"CUP3940_1591 secY; preprotein translocase SecYEG, SecY subunit\tK03076 secY; preprotein translocase subunit SecY"
				},
				{
					"name":"CUP3940_0948 ffh; signal recognition particle protein\tK03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]"
				},
				{
					"name":"CUP3940_1381 ftsY; cell division protein FtsY\tK03110 ftsY; fused signal recognition particle receptor"
				},
				{
					"name":"CUP3940_0589 yajC; preprotein translocase subunit YajC\tK03210 yajC; preprotein translocase subunit YajC"
				},
				{
					"name":"CUP3940_0871 oxaA; membrane protein insertase, YidC\/Oxa1 family\tK03217 yidC; YidC\/Oxa1 family membrane protein insertase"
				},
				{
					"name":"CUP3940_1200 twin arginine translocation system, TatA\/E family protein\tK03116 tatA; sec-independent protein translocase protein TatA"
				},
				{
					"name":"CUP3940_0857 tatB; twin arginine translocation system, TatB protein\tK03117 tatB; sec-independent protein translocase protein TatB"
				},
				{
					"name":"CUP3940_0858 tatC; twin arginine translocation system, TatC protein\tK03118 tatC; sec-independent protein translocase protein TatC"
				}
				]
			},
			{
				"name":"02042 Bacterial toxins [BR:cux02042]",
				"children":[
				{
					"name":"CUP3940_0104 cdtA; cytolethal distending toxin, subunit CdtA\tK11013 cdtA; cytolethal distending toxin subunit A"
				},
				{
					"name":"CUP3940_0105 cdtB; cytolethal distending toxin, subunit CdtB\tK11014 cdtB; cytolethal distending toxin subunit B"
				},
				{
					"name":"CUP3940_0106 cdtC; cytolethal distending toxin, subunit CdtC\tK11015 cdtC; cytolethal distending toxin subunit C"
				},
				{
					"name":"CUP3940_0161 HlyC\/CorC family transporter\tK03699 tlyC; magnesium and cobalt exporter, CNNM family"
				}
				]
			},
			{
				"name":"02022 Two-component system [BR:cux02022]",
				"children":[
				{
					"name":"CUP3940_0722 two-component system sensor histidine kinase\tK07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]"
				},
				{
					"name":"CUP3940_0721 two-component system response regulator\tK07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP"
				},
				{
					"name":"CUP3940_0458 racS; two-component system sensor histidine kinase\tK02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]"
				},
				{
					"name":"CUP3940_0746 cprS; two-component system sensor histidine kinase\tK02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]"
				},
				{
					"name":"CUP3940_0932 dccS; two-component system sensor histidine kinase\tK02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]"
				},
				{
					"name":"CUP3940_0459 racR; two-component system response regulator\tK02483 K02483; two-component system, OmpR family, response regulator"
				},
				{
					"name":"CUP3940_0745 cprR; two-component system response regulator\tK02483 K02483; two-component system, OmpR family, response regulator"
				},
				{
					"name":"CUP3940_0914 cosR; two-component system response regulator\tK02483 K02483; two-component system, OmpR family, response regulator"
				},
				{
					"name":"CUP3940_0232 flgS; flagella-associated two-component system, sensor histidine kinase\tK02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]"
				},
				{
					"name":"CUP3940_0475 flgR; flagella-associated two-component system, response regulator\tK02481 flgR; two-component system, NtrC family, response regulator"
				},
				{
					"name":"CUP3940_0531 cheA; chemotaxis sensory histidine kinase\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]"
				},
				{
					"name":"CUP3940_1110 cheY; chemotaxis regulatory protein\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY"
				},
				{
					"name":"CUP3940_0505 cheB'; MCP protein-glutamate methylesterase\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]"
				},
				{
					"name":"CUP3940_0530 cheV; chemotaxis signal transduction protein CheV\tK03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV"
				}
				]
			},
			{
				"name":"02035 Bacterial motility proteins [BR:cux02035]",
				"children":[
				{
					"name":"CUP3940_0531 cheA; chemotaxis sensory histidine kinase\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]"
				},
				{
					"name":"CUP3940_0532 cheW; purine-binding chemotaxis protein CheW\tK03408 cheW; purine-binding chemotaxis protein CheW"
				},
				{
					"name":"CUP3940_0504 cheR; MCP protein methyltransferase\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]"
				},
				{
					"name":"CUP3940_0505 cheB'; MCP protein-glutamate methylesterase\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]"
				},
				{
					"name":"CUP3940_1110 cheY; chemotaxis regulatory protein\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY"
				},
				{
					"name":"CUP3940_0530 cheV; chemotaxis signal transduction protein CheV\tK03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV"
				},
				{
					"name":"CUP3940_0037 Cache sensor-containing MCP-domain signal transduction protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"CUP3940_0048 4HB sensor-containing MCP-domain signal transduction protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"CUP3940_0238 Cache sensor-containing MCP-domain signal transduction protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"CUP3940_0972 MCP-domain signal transduction protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"CUP3940_1346 MCP-domain signal transduction protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"CUP3940_1382 Cache sensor-containing MCP-domain signal transduction protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"CUP3940_1096 fliH; flagellar export apparatus, cytoplasmic ATPase complex, FliH component\tK02411 fliH; flagellar assembly protein FliH"
				},
				{
					"name":"CUP3940_1388 fliI; flagellar export apparatus, cytoplasmic ATPase complex, FliI component\tK02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]"
				},
				{
					"name":"CUP3940_0763 fliP; flagellar export apparatus, transmembrane gate complex, FliP component\tK02419 fliP; flagellar biosynthesis protein FliP"
				},
				{
					"name":"CUP3940_1558 fliQ; flagellar export apparatus, transmembrane gate complex, FliQ component\tK02420 fliQ; flagellar biosynthesis protein FliQ"
				},
				{
					"name":"CUP3940_1203 fliR; flagellar export apparatus, transmembrane gate complex, FliR component\tK02421 fliR; flagellar biosynthesis protein FliR"
				},
				{
					"name":"CUP3940_0799 flhA; flagellar export apparatus, transmembrane gate complex, FlhA component\tK02400 flhA; flagellar biosynthesis protein FlhA"
				},
				{
					"name":"CUP3940_1081 flhB; flagellar export apparatus, transmembrane gate complex, FlhB component\tK02401 flhB; flagellar biosynthesis protein FlhB"
				},
				{
					"name":"CUP3940_1097 fliG; flagellar motor switch C-ring protein FliG\tK02410 fliG; flagellar motor switch protein FliG"
				},
				{
					"name":"CUP3940_0639 fliM; flagellar motor switch C-ring protein FliM\tK02416 fliM; flagellar motor switch protein FliM"
				},
				{
					"name":"CUP3940_0640 fliY; flagellar motor switch C-ring protein FliY\tK02417 fliN; flagellar motor switch protein FliN"
				},
				{
					"name":"CUP3940_0910 fliN; flagellar motor switch C-ring protein FliN\tK02417 fliN; flagellar motor switch protein FliN"
				},
				{
					"name":"CUP3940_1098 fliF; flagellar inner membrane MS-ring protein FliF\tK02409 fliF; flagellar M-ring protein FliF"
				},
				{
					"name":"CUP3940_1483 flgI; flagellar peptidoglycan-localized P-ring protein FlgI\tK02394 flgI; flagellar P-ring protein FlgI"
				},
				{
					"name":"CUP3940_1245 flgA; flagellar P-ring chaperone FlgA\tK02386 flgA; flagellar basal body P-ring formation protein FlgA"
				},
				{
					"name":"CUP3940_0850 flgH; flagellar outer membrane L-ring protein FlgH\tK02393 flgH; flagellar L-ring protein FlgH"
				},
				{
					"name":"CUP3940_1513 fliL; flagellar motor-associated protein FliL\tK02415 fliL; flagellar protein FliL"
				},
				{
					"name":"CUP3940_0752 fliE; flagellar proximal rod protein FliE\tK02408 fliE; flagellar hook-basal body complex protein FliE"
				},
				{
					"name":"CUP3940_0131 fliKII; flagellar hook-length control protein FliK\tK02414 fliK; flagellar hook-length control protein FliK"
				},
				{
					"name":"CUP3940_0750 flgB; flagellar proximal rod protein FlgB\tK02387 flgB; flagellar basal-body rod protein FlgB"
				},
				{
					"name":"CUP3940_0751 flgC; flagellar proximal rod protein FlgC\tK02388 flgC; flagellar basal-body rod protein FlgC"
				},
				{
					"name":"CUP3940_0132 flgD; flagellar hook assembly protein\tK02389 flgD; flagellar basal-body rod modification protein FlgD"
				},
				{
					"name":"CUP3940_0234 flgF; flagellar distal rod protein FlgF\tK02391 flgF; flagellar basal-body rod protein FlgF"
				},
				{
					"name":"CUP3940_0233 flgG; flagellar distal rod protein FlgG\tK02392 flgG; flagellar basal-body rod protein FlgG"
				},
				{
					"name":"CUP3940_1482 putative flagellar rod assembly protein FlgJ\tK02395 flgJ; peptidoglycan hydrolase FlgJ"
				},
				{
					"name":"CUP3940_0133 flgE; flagellar hook protein\tK02390 flgE; flagellar hook protein FlgE"
				},
				{
					"name":"CUP3940_1635 flgE2; flagellar hook protein, epsilonproteobacterial variant\tK02390 flgE; flagellar hook protein FlgE"
				},
				{
					"name":"CUP3940_1479 flgK; proximal flagellar hook-filament junction protein\tK02396 flgK; flagellar hook-associated protein 1"
				},
				{
					"name":"CUP3940_0685 flgL; distal flagellar hook-filament junction protein\tK02397 flgL; flagellar hook-associated protein 3 FlgL"
				},
				{
					"name":"CUP3940_1149 flgP; basal disk protein FlgP\tK09860 flgP; outer membrane protein FlgP"
				},
				{
					"name":"CUP3940_1148 flgQ; putative basal disk-associated protein FlgQ\tK24346 flgQ; flagellar motility protein FlgQ"
				},
				{
					"name":"CUP3940_0093 flaB; flagellin\tK02406 fliC; flagellin"
				},
				{
					"name":"CUP3940_0652 flaC; flagellar secreted protein\tK02406 fliC; flagellin"
				},
				{
					"name":"CUP3940_1474 flaA; flagellin\tK02406 fliC; flagellin"
				},
				{
					"name":"CUP3940_0451 fliD; flagellar filament cap protein\tK02407 fliD; flagellar hook-associated protein 2"
				},
				{
					"name":"CUP3940_0450 fliS; flagellar chaperone FliS\tK02422 fliS; flagellar secretion chaperone FliS"
				},
				{
					"name":"CUP3940_0638 fliA; RNA polymerase sigma28 factor\tK02405 fliA; RNA polymerase sigma factor FliA"
				},
				{
					"name":"CUP3940_1231 motA; flagellar motor stator protein\tK02556 motA; chemotaxis protein MotA"
				},
				{
					"name":"CUP3940_1232 motB; flagellar motor stator protein\tK02557 motB; chemotaxis protein MotB"
				},
				{
					"name":"CUP3940_0423 fliW; putative flagellin level sensor protein FliW\tK13626 fliW; flagellar assembly factor FliW"
				},
				{
					"name":"CUP3940_0452 flaG; flagellar protein FlaG\tK06603 flaG; flagellar protein FlaG"
				},
				{
					"name":"CUP3940_0635 flhF; polar flagellar biogenesis protein FlhF\tK02404 flhF; flagellar biosynthesis protein FlhF"
				},
				{
					"name":"CUP3940_0636 flhG; polar flagellar biogenesis regulatory protein FlhG\tK04562 flhG; flagellar biosynthesis protein FlhG"
				},
				{
					"name":"CUP3940_0769 peptidase A24 N-terminal domain-containing protein, putative prepilin signal peptidase\tK02654 pilD; leader peptidase (prepilin peptidase) \/ N-methyltransferase [EC:3.4.23.43 2.1.1.-]"
				}
				]
			},
			{
				"name":"03037 Cilium and associated proteins"
			},
			{
				"name":"04812 Cytoskeleton proteins [BR:cux04812]",
				"children":[
				{
					"name":"CUP3940_0218 mrdB; cell wall shape-determining protein\tK03569 mreB; rod shape-determining protein MreB and related proteins"
				},
				{
					"name":"CUP3940_0494 ftsZ; cell division protein FtsZ\tK03531 ftsZ; cell division protein FtsZ"
				},
				{
					"name":"CUP3940_0539 ftsA; cell division protein FtsA\tK03590 ftsA; cell division protein FtsA"
				},
				{
					"name":"CUP3940_1588 parA; chromosome partitioning protein\tK03496 parA; chromosome partitioning protein"
				},
				{
					"name":"CUP3940_1587 parB; chromosome partitioning protein\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein"
				}
				]
			},
			{
				"name":"04147 Exosome [BR:cux04147]",
				"children":[
				{
					"name":"CUP3940_0272 htpG; chaperone protein HtpG\tK04079 HSP90A; molecular chaperone HtpG"
				},
				{
					"name":"CUP3940_1555 eno; enolase\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]"
				},
				{
					"name":"CUP3940_1517 gapA; glyceraldehyde 3-phosphate dehydrogenase A\tK00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]"
				},
				{
					"name":"CUP3940_1518 pgk; phosphoglycerate kinase\tK00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]"
				},
				{
					"name":"CUP3940_1036 pykF; pyruvate kinase I\tK00873 PK; pyruvate kinase [EC:2.7.1.40]"
				},
				{
					"name":"CUP3940_1083 ahpC; alkyl hydroperoxide reductase protein, peroxidase component\tK03386 PRDX2_4; peroxiredoxin 2\/4 [EC:1.11.1.24]"
				},
				{
					"name":"CUP3940_0961 groEL; 60 kD chaperonin (cpn60)\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]"
				},
				{
					"name":"CUP3940_0506 dnaK; DnaK system heat shock chaperone\tK04043 dnaK; molecular chaperone DnaK"
				},
				{
					"name":"CUP3940_0023 pgi; phosphoglucose isomerase\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]"
				},
				{
					"name":"CUP3940_0436 guaB; inosine-5'-monophosphate dehydrogenase\tK00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]"
				},
				{
					"name":"CUP3940_1303 tuf; translation elongation factor Tu\tK02358 tuf; elongation factor Tu"
				},
				{
					"name":"CUP3940_0517 histidine triad nucleotide-binding protein, Hint\/PKCI branch\tK02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]"
				},
				{
					"name":"CUP3940_1064 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]"
				},
				{
					"name":"CUP3940_0844 adk; adenylate kinase\tK00939 adk; adenylate kinase [EC:2.7.4.3]"
				},
				{
					"name":"CUP3940_0645 apt; adenine phosphoribosyltransferase\tK00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]"
				},
				{
					"name":"CUP3940_0518 argH; argininosuccinate lyase\tK01755 argH; argininosuccinate lyase [EC:4.3.2.1]"
				},
				{
					"name":"CUP3940_0845 argG; argininosuccinate synthase\tK01940 argG; argininosuccinate synthase [EC:6.3.4.5]"
				},
				{
					"name":"CUP3940_0781 fbp; fructose-1,6-bisphosphatase I\tK03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]"
				},
				{
					"name":"CUP3940_0958 glnA; glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]"
				},
				{
					"name":"CUP3940_0293 hemB; porphobilinogen synthase\tK01698 hemB; porphobilinogen synthase [EC:4.2.1.24]"
				},
				{
					"name":"CUP3940_0983 serA; alpha-ketoglutarate reductase \/ D-3-phosphoglycerate dehydrogenase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]"
				},
				{
					"name":"CUP3940_0973 purH; AICAR transformylase \/ IMP cyclohydrolase\tK00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase \/ IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]"
				},
				{
					"name":"CUP3940_1519 tpiA; triosephosphate isomerase\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]"
				}
				]
			},
			{
				"name":"02048 Prokaryotic defense system [BR:cux02048]",
				"children":[
				{
					"name":"CUP3940_0296 hsdR1; type I restriction\/modification system, restriction subunit\tK01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]"
				},
				{
					"name":"CUP3940_1051 hsdR3; type I restriction\/modification system, restriction subunit\tK01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]"
				},
				{
					"name":"CUP3940_1575 hsdR4; type I restriction\/modification system, restriction subunit\tK01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]"
				},
				{
					"name":"CUP3940_0300 hsdS1; type I restriction\/modification system, specificity subunit\tK01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]"
				},
				{
					"name":"CUP3940_1053 hsdS3; type I restriction\/modification system, specificity subunit\tK01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]"
				},
				{
					"name":"CUP3940_1576 hsdS4; type I restriction\/modification system, specificity subunit\tK01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]"
				},
				{
					"name":"CUP3940_0297 hsdM1; type I restriction\/modification system, methylation subunit\tK03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1056 hsdM3; type I restriction\/modification system, methylation subunit\tK03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1339 type IIB restriction\/modification system, restriction\/methyltransferase subunit\tK03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1620 type IIG restriction\/modification system\tK03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_0716 type IIP restriction\/modification system, cytosine-specific DNA methyltransferase\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1016 type IIP restriction\/modification system, DNA methyltransferase\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1626 type IIS restriction\/modification system, DNA methyltransferase\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1646 type IIS restriction\/modification system, DNA methyltransferase\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1229 type II restriction\/modification system, DNA methyltransferase\tK07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1269 type II DNA methyltransferase\tK07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1627 type IIS restriction\/modification system, DNA methyltransferase\tK07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1628 type II adenine-specific DNA methyltransferase (EcoRI methylase)\tK07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1645 type IIS restriction\/modification system, DNA methyltransferase\tK07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1363 type II restriction\/modification system, DNA methyltransferase\tK00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_0551 type II cytosine-specific DNA methyltransferase\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]"
				},
				{
					"name":"CUP3940_1467 type IIP restriction\/modification system, cytosine-specific DNA methyltransferase\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]"
				},
				{
					"name":"CUP3940_1640 type IIP restriction\/modification system, cytosine-specific DNA methyltransferase\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]"
				},
				{
					"name":"CUP3940_0071 type III restriction\/modification system, restriction subunit\tK01156 res; type III restriction enzyme [EC:3.1.21.5]"
				},
				{
					"name":"CUP3940_0525 type III restriction\/modification system, restriction subunit\tK01156 res; type III restriction enzyme [EC:3.1.21.5]"
				},
				{
					"name":"CUP3940_0072 type III restriction\/modification system, modification subunit\tK07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_1248 type IIP restriction\/modification system, DNA methyltransferase\tK07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]"
				},
				{
					"name":"CUP3940_0299 toxin-antitoxin system, toxin component, RelE\/ParE family\tK06218 relE; mRNA interferase RelE\/StbE"
				},
				{
					"name":"CUP3940_0935 putative transcriptional regulator\tK18918 relB; RHH-type transcriptional regulator, rel operon repressor \/ antitoxin RelB"
				},
				{
					"name":"CUP3940_1054 Fic domain-containing protein\tK07341 doc; death on curing protein"
				},
				{
					"name":"CUP3940_0494 ftsZ; cell division protein FtsZ\tK03531 ftsZ; cell division protein FtsZ"
				},
				{
					"name":"CUP3940_0218 mrdB; cell wall shape-determining protein\tK03569 mreB; rod shape-determining protein MreB and related proteins"
				},
				{
					"name":"CUP3940_0253 gltX2; glutamyl-tRNA synthetase\tK01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]"
				},
				{
					"name":"CUP3940_0026 iscS; cysteine desulfurase\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]"
				}
				]
			},
			{
				"name":"04030 G protein-coupled receptors"
			},
			{
				"name":"04050 Cytokine receptors"
			},
			{
				"name":"04054 Pattern recognition receptors"
			},
			{
				"name":"03310 Nuclear receptors"
			},
			{
				"name":"04040 Ion channels"
			},
			{
				"name":"04031 GTP-binding proteins"
			},
			{
				"name":"04052 Cytokines and neuropeptides"
			},
			{
				"name":"04515 Cell adhesion molecules"
			},
			{
				"name":"04090 CD molecules"
			},
			{
				"name":"01504 Antimicrobial resistance genes [BR:cux01504]",
				"children":[
				{
					"name":"CUP3940_1335 aminoglycoside N3'-acetyltransferase\tK00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]"
				},
				{
					"name":"CUP3940_0605 cmeE; multidrug efflux system CmeDEF, membrane fusion component CmeE\tK03585 acrA; membrane fusion protein, multidrug efflux system"
				},
				{
					"name":"CUP3940_0919 cmeA; multidrug efflux system CmeABC, periplasmic fusion protein CmeA\tK03585 acrA; membrane fusion protein, multidrug efflux system"
				},
				{
					"name":"CUP3940_0604 cmeF; multidrug efflux system CmeDEF, integral membrane component CmeF\tK18138 acrB; multidrug efflux pump"
				},
				{
					"name":"CUP3940_0920 cmeB; multidrug efflux system CmeABC, inner membrane drug transporter CmeB\tK18138 acrB; multidrug efflux pump"
				},
				{
					"name":"CUP3940_0921 cmeC; multidrug efflux system CmeABC, outer membrane lipoprotein CmeC\tK18139 oprM; outer membrane protein, multidrug efflux system"
				},
				{
					"name":"CUP3940_0606 cmeD; multidrug efflux system CmeDEF, outer membrane component CmeD\tK12340 tolC; outer membrane protein"
				}
				]
			},
			{
				"name":"00535 Proteoglycans"
			},
			{
				"name":"00536 Glycosaminoglycan binding proteins"
			},
			{
				"name":"00537 Glycosylphosphatidylinositol (GPI)-anchored proteins"
			},
			{
				"name":"04091 Lectins"
			},
			{
				"name":"04990 Domain-containing proteins not elsewhere classified"
			}
			]
		},
		{
			"name":"09185 Viral protein families",
			"children":[
			{
				"name":"03200 Viral proteins"
			},
			{
				"name":"03210 Viral fusion proteins"
			}
			]
		},
		{
			"name":"09184 RNA family",
			"children":[
			{
				"name":"03100 Non-coding RNAs [BR:cux03100]",
				"children":[
				{
					"name":"CUP3940_0050 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala"
				},
				{
					"name":"CUP3940_0441 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala"
				},
				{
					"name":"CUP3940_0682 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala"
				},
				{
					"name":"CUP3940_1503 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala"
				},
				{
					"name":"CUP3940_0660 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg"
				},
				{
					"name":"CUP3940_1285 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg"
				},
				{
					"name":"CUP3940_1526 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg"
				},
				{
					"name":"CUP3940_1527 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg"
				},
				{
					"name":"CUP3940_0940 tRNA-Asn\tK14220 tRNA-Asn; tRNA Asn"
				},
				{
					"name":"CUP3940_1316 tRNA-Asp\tK14221 tRNA-Asp; tRNA Asp"
				},
				{
					"name":"CUP3940_1320 tRNA-Asp\tK14221 tRNA-Asp; tRNA Asp"
				},
				{
					"name":"CUP3940_0078 tRNA-Cys\tK14222 tRNA-Cys; tRNA Cys"
				},
				{
					"name":"CUP3940_0415 tRNA-Gln\tK14223 tRNA-Gln; tRNA Gln"
				},
				{
					"name":"CUP3940_1318 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu"
				},
				{
					"name":"CUP3940_1484 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu"
				},
				{
					"name":"CUP3940_0076 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly"
				},
				{
					"name":"CUP3940_0654 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly"
				},
				{
					"name":"CUP3940_1305 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly"
				},
				{
					"name":"CUP3940_1525 tRNA-His\tK14226 tRNA-His; tRNA His"
				},
				{
					"name":"CUP3940_0051 tRNA-Ile\tK14227 tRNA-Ile; tRNA Ile"
				},
				{
					"name":"CUP3940_0442 tRNA-Ile\tK14227 tRNA-Ile; tRNA Ile"
				},
				{
					"name":"CUP3940_0681 tRNA-Ile\tK14227 tRNA-Ile; tRNA Ile"
				},
				{
					"name":"CUP3940_0077 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu"
				},
				{
					"name":"CUP3940_0686 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu"
				},
				{
					"name":"CUP3940_0703 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu"
				},
				{
					"name":"CUP3940_1528 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu"
				},
				{
					"name":"CUP3940_1314 tRNA-Lys\tK14229 tRNA-Lys; tRNA Lys"
				},
				{
					"name":"CUP3940_1317 tRNA-Lys\tK14229 tRNA-Lys; tRNA Lys"
				},
				{
					"name":"CUP3940_0416 tRNA-Met\tK14230 tRNA-Met; tRNA Met"
				},
				{
					"name":"CUP3940_1190 tRNA-Met\tK14230 tRNA-Met; tRNA Met"
				},
				{
					"name":"CUP3940_1476 tRNA-Met\tK14230 tRNA-Met; tRNA Met"
				},
				{
					"name":"CUP3940_0081 tRNA-Phe\tK14231 tRNA-Phe; tRNA Phe"
				},
				{
					"name":"CUP3940_1524 tRNA-Pro\tK14232 tRNA-Pro; tRNA Pro"
				},
				{
					"name":"CUP3940_0079 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser"
				},
				{
					"name":"CUP3940_1057 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser"
				},
				{
					"name":"CUP3940_1475 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser"
				},
				{
					"name":"CUP3940_1304 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr"
				},
				{
					"name":"CUP3940_1307 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr"
				},
				{
					"name":"CUP3940_1301 tRNA-Trp\tK14235 tRNA-Trp; tRNA Trp"
				},
				{
					"name":"CUP3940_1306 tRNA-Tyr\tK14236 tRNA-Tyr; tRNA Tyr"
				},
				{
					"name":"CUP3940_1315 tRNA-Val\tK14237 tRNA-Val; tRNA Val"
				},
				{
					"name":"CUP3940_1319 tRNA-Val\tK14237 tRNA-Val; tRNA Val"
				},
				{
					"name":"CUP3940_1502 tRNA-Val\tK14237 tRNA-Val; tRNA Val"
				},
				{
					"name":"CUP3940_0142 selC; tRNA-Sec\tK14238 tRNA-Sec; tRNA Sec"
				},
				{
					"name":"CUP3940_0049 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA"
				},
				{
					"name":"CUP3940_0440 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA"
				},
				{
					"name":"CUP3940_0683 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA"
				},
				{
					"name":"CUP3940_0055 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA"
				},
				{
					"name":"CUP3940_0413 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA"
				},
				{
					"name":"CUP3940_1027 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA"
				},
				{
					"name":"CUP3940_0056 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA"
				},
				{
					"name":"CUP3940_0412 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA"
				},
				{
					"name":"CUP3940_1026 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA"
				},
				{
					"name":"CUP3940_0448 rnpB; ribonuclease P, RNA component\tK01978 rnpB; RNase P catalytic RNA component"
				},
				{
					"name":"CUP3940_1223 ssrA; 10Sa RNA\tK15035 ssrA; transfer-messenger RNA"
				},
				{
					"name":"CUP3940_1498 srpB; bacterial signal recognition particle RNA (4.5S RNA)\tK01983 ffs; signal recognition particle 4.5S RNA"
				}
				]
			}
			]
		}
		]
	},
	{
		"name":"09190 Not Included in Pathway or Brite",
		"children":[
		{
			"name":"09191 Unclassified: metabolism",
			"children":[
			{
				"name":"99980 Enzymes with EC numbers",
				"children":[
				{
					"name":"CUP3940_1247 solA; N-methyltryptophan oxidase\tK02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-]"
				},
				{
					"name":"CUP3940_0013 flavodoxin-like fold domain-containing protein, putative NAD(P)H (quinone) dehydrogenase\/reductase\tK03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]"
				},
				{
					"name":"CUP3940_1104 msrB; R-isomer-specific methionine sulfoxide reductase\tK07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]"
				},
				{
					"name":"CUP3940_0168 yedY; periplasmic DMSO\/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit\tK07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]"
				},
				{
					"name":"CUP3940_0928 ccpA; periplasmic diheme cytochrome c peroxidase\tK00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]"
				},
				{
					"name":"CUP3940_0212 bcp; thiol peroxidase\tK03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]"
				},
				{
					"name":"CUP3940_1235 tpx; lipid hydroperoxide peroxidase\tK11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]"
				},
				{
					"name":"CUP3940_1174 hydB; [Ni-Fe] hydrogenase, large subunit\tK05922 hydB; quinone-reactive Ni\/Fe-hydrogenase large subunit [EC:1.12.5.1]"
				},
				{
					"name":"CUP3940_1175 hydA; [Ni-Fe] hydrogenase, small subunit\tK05927 hydA; quinone-reactive Ni\/Fe-hydrogenase small subunit [EC:1.12.5.1]"
				},
				{
					"name":"CUP3940_1521 [Ni-Fe] hydrogenase, small subunit\tK05927 hydA; quinone-reactive Ni\/Fe-hydrogenase small subunit [EC:1.12.5.1]"
				},
				{
					"name":"CUP3940_0564 cft; ferritin\tK02217 ftnA; ferritin [EC:1.16.3.2]"
				},
				{
					"name":"CUP3940_0164 pcm; L-isoaspartate protein carboxylmethyltransferase, type II\tK00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]"
				},
				{
					"name":"CUP3940_0923 hemN3; oxygen-independent coproporphyrinogen III oxidase\tK23078 mqnK; menaquinone C8-methyltransferase [EC:2.1.1.350]"
				},
				{
					"name":"CUP3940_0588 lnt; apolipoprotein N-acyltransferase\tK03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]"
				},
				{
					"name":"CUP3940_0509 aat; leucyl, phenylalanyl-tRNA-protein transferase\tK00684 aat; leucyl\/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]"
				},
				{
					"name":"CUP3940_0492 ate; arginyltransferase\tK21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]"
				},
				{
					"name":"CUP3940_1137 pglB; undecaprenyl-diphosphooligosaccharide--protein glycotransferase\tK17251 pglB; undecaprenyl-diphosphooligosaccharide---protein glycotransferase [EC:2.4.99.19]"
				},
				{
					"name":"CUP3940_1034 lgt; phosphatidylglycerol-prolipoprotein diacylglyceryl transferase\tK13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]"
				},
				{
					"name":"CUP3940_1154 cysC; adenylylsulfate kinase\tK23148 E2.7.1.224; cytidine diphosphoramidate kinase [EC:2.7.1.224]"
				},
				{
					"name":"CUP3940_0677 putative phosphoenolpyruvate synthase \/ pyruvate phosphate dikinase\tK22424 E2.7.3.13; glutamine kinase [EC:2.7.3.13]"
				},
				{
					"name":"CUP3940_0679 phosphoramidate cytidylyltransferase\tK01009 E2.7.7.103; L-glutamine-phosphate cytidylyltransferase [EC:2.7.7.103]"
				},
				{
					"name":"CUP3940_1135 pglC; N,N'-diacetylbacilliosaminyl-1-phosphate transferase\tK15915 pglC; undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase [EC:2.7.8.36]"
				},
				{
					"name":"CUP3940_0878 acyl-CoA thioesterase\tK07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]"
				},
				{
					"name":"CUP3940_0602 sixA; phosphohistidine phosphatase\tK08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]"
				},
				{
					"name":"CUP3940_0839 tatD; ssDNA\/RNA exonuclease, 3' - 5' specific\tK03424 tatD; TatD DNase family protein [EC:3.1.21.-]"
				},
				{
					"name":"CUP3940_1351 def; peptide deformylase\tK01462 PDF; peptide deformylase [EC:3.5.1.88]"
				},
				{
					"name":"CUP3940_0808 cfiP; flagella modification protein\tK09022 ridA; 2-iminobutanoate\/2-iminopropanoate deaminase [EC:3.5.99.10]"
				},
				{
					"name":"CUP3940_1348 carbohydrate kinase, YjeF-related protein\tK23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase \/ NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]"
				},
				{
					"name":"CUP3940_1552 lig; DNA ligase\tK26441 lig; DNA ligase [EC:6.5.1.1]"
				},
				{
					"name":"CUP3940_0087 copA; copper-translocating P-type ATPase\tK01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]"
				}
				]
			},
			{
				"name":"99981 Carbohydrate metabolism",
				"children":[
				{
					"name":"CUP3940_0624 lldE; NAD-independent L-lactate dehydrogenase LldEFG, oxidoreductase subunit\tK18928 lldE; L-lactate dehydrogenase complex protein LldE"
				},
				{
					"name":"CUP3940_0625 lldF; NAD-independent L-lactate dehydrogenase LldEFG, iron-sulfur cluster subunit\tK18929 lldF; L-lactate dehydrogenase complex protein LldF"
				},
				{
					"name":"CUP3940_0626 lldG; NAD-independent L-lactate dehydrogenase LldEFG, subunit LldG\tK00782 lldG; L-lactate dehydrogenase complex protein LldG"
				}
				]
			},
			{
				"name":"99982 Energy metabolism",
				"children":[
				{
					"name":"CUP3940_1529 fdhD; formate dehydrogenase accessory protein\tK02379 fdhD; FdhD protein"
				},
				{
					"name":"CUP3940_0025 iscU; [Fe-S] cluster assembly scaffold protein\tK13819 K13819; NifU-like protein"
				},
				{
					"name":"CUP3940_0825 napD; periplasmic nitrate reductase assembly protein\tK02570 napD; periplasmic nitrate reductase NapD"
				},
				{
					"name":"CUP3940_0173 fldA; flavodoxin\tK03839 fldA; flavodoxin I"
				},
				{
					"name":"CUP3940_0829 napG; menaquinol dehydrogenase NapGH, periplasmic component NapG\tK02573 napG; ferredoxin-type protein NapG"
				},
				{
					"name":"CUP3940_0828 napH; menaquinol dehydrogenase NapGH, membrane component NapH\tK02574 napH; ferredoxin-type protein NapH"
				}
				]
			},
			{
				"name":"99983 Lipid metabolism"
			},
			{
				"name":"99984 Nucleotide metabolism"
			},
			{
				"name":"99985 Amino acid metabolism",
				"children":[
				{
					"name":"CUP3940_0653 type III pyridoxal 5-phosphate (PLP)-dependent enzyme, YggS family\tK06997 yggS; PLP dependent protein"
				}
				]
			},
			{
				"name":"99986 Glycan metabolism"
			},
			{
				"name":"99987 Cofactor metabolism",
				"children":[
				{
					"name":"CUP3940_0782 mobB; molybdenum cofactor guanylyltransferase protein B\tK03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein"
				}
				]
			},
			{
				"name":"99988 Secondary metabolism"
			},
			{
				"name":"99999 Others"
			}
			]
		},
		{
			"name":"09192 Unclassified: genetic information processing",
			"children":[
			{
				"name":"99973 Transcription"
			},
			{
				"name":"99974 Translation"
			},
			{
				"name":"99975 Protein processing",
				"children":[
				{
					"name":"CUP3940_0886 clpS; ClpAP chaperone-protease complex specificity factor\tK06891 clpS; ATP-dependent Clp protease adaptor protein ClpS"
				},
				{
					"name":"CUP3940_1353 tig; trigger factor (peptidyl-prolyl cis\/trans isomerase, chaperone)\tK03545 tig; trigger factor"
				},
				{
					"name":"CUP3940_0167 yedZ; periplasmic DMSO\/TMAO reductase YedYZ, heme-binding membrane subunit\tK17247 msrQ; methionine sulfoxide reductase heme-binding subunit"
				},
				{
					"name":"CUP3940_0890 smpB; SsrA-binding protein\tK03664 smpB; SsrA-binding protein"
				},
				{
					"name":"CUP3940_0690 hypC; hydrogenase assembly chaperone HypC\tK04653 hypC; hydrogenase expression\/formation protein HypC"
				},
				{
					"name":"CUP3940_0691 hypD; hydrogenase expression\/formation protein HypD\tK04654 hypD; hydrogenase expression\/formation protein HypD"
				},
				{
					"name":"CUP3940_0688 hypE; hydrogenase expression\/formation protein HypE\tK04655 hypE; hydrogenase expression\/formation protein HypE"
				},
				{
					"name":"CUP3940_0974 hypF; [Ni-Fe] hydrogenase maturation protein HypF\tK04656 hypF; hydrogenase maturation protein HypF"
				},
				{
					"name":"CUP3940_1350 magnesium chelatase-related protein\tK07391 comM; magnesium chelatase family protein"
				},
				{
					"name":"CUP3940_0039 selT\/selW\/selH selenoprotein\tK07401 K07401; selenoprotein W-related protein"
				}
				]
			},
			{
				"name":"99976 Replication and repair",
				"children":[
				{
					"name":"CUP3940_1349 rmuC; DNA recombination protein\tK09760 rmuC; DNA recombination protein RmuC"
				},
				{
					"name":"CUP3940_0599 magIII; 3-methyladenine DNA glycosylase\tK07457 K07457; endonuclease III related protein"
				},
				{
					"name":"CUP3940_0360 UPF0102 domain-containing protein\tK07460 yraN; putative endonuclease"
				},
				{
					"name":"CUP3940_1634 GIY-YIG nuclease superfamily protein\tK07461 K07461; putative endonuclease"
				},
				{
					"name":"CUP3940_0759 dprA; DNA protecting protein DprA\tK04096 smf; DNA processing protein"
				},
				{
					"name":"CUP3940_0320 rarA; recombination factor protein RarA\tK07478 ycaJ; putative ATPase"
				},
				{
					"name":"CUP3940_1143 wlaX; putative polysaccharide biosynthesis protein\tK07501 K07501; 3'-5' exonuclease"
				},
				{
					"name":"CUP3940_0381 site-specific tyrosine recombinase, phage integrase family (INT_ICEBs1_C_like domain)\tK14059 int; integrase"
				}
				]
			},
			{
				"name":"99979 Viral proteins"
			},
			{
				"name":"99998 Others",
				"children":[
				{
					"name":"CUP3940_1408 YbaB\/EbfC DNA-binding family protein\tK09747 ebfC; nucleoid-associated protein EbfC"
				}
				]
			}
			]
		},
		{
			"name":"09193 Unclassified: signaling and cellular processes",
			"children":[
			{
				"name":"99977 Transport",
				"children":[
				{
					"name":"CUP3940_1325 dipeptide\/tripeptide permease\tK03305 TC.POT; proton-dependent oligopeptide transporter, POT family"
				},
				{
					"name":"CUP3940_1216 inorganic phosphate transporter, PitA family\tK03306 TC.PIT; inorganic phosphate transporter, PiT family"
				},
				{
					"name":"CUP3940_0259 sodium-dependent transporter, SNF family\tK03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family"
				},
				{
					"name":"CUP3940_0521 sodium-dependent transporter, SNF family\tK03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family"
				},
				{
					"name":"CUP3940_0985 sodium:alanine symporter family protein\tK03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family"
				},
				{
					"name":"CUP3940_0620 sodium:sulfate symporter family protein\tK03319 TC.DASS; divalent anion:Na+ symporter, DASS family"
				}
				]
			},
			{
				"name":"99978 Cell growth",
				"children":[
				{
					"name":"CUP3940_0870 Jag domain-containing protein\tK06346 jag; spoIIIJ-associated protein"
				}
				]
			},
			{
				"name":"99993 Cell motility",
				"children":[
				{
					"name":"CUP3940_0064 outer membrane lipoprotein, putative peptidoglycan-synthase activator LpoB\tK07337 K07337; penicillin-binding protein activator"
				}
				]
			},
			{
				"name":"99995 Signaling proteins",
				"children":[
				{
					"name":"CUP3940_0129 typA; GTP-binding protein TypA\tK06207 typA; GTP-binding protein"
				},
				{
					"name":"CUP3940_0865 putative YajQ-like nucleotide-binding protein (DUF520 domain)\tK09767 yajQ; cyclic-di-GMP-binding protein"
				}
				]
			},
			{
				"name":"99992 Structural proteins",
				"children":[
				{
					"name":"CUP3940_0548 lolA; periplasmic outer membrane-specific lipoprotein chaperone\tK03634 lolA; outer membrane lipoprotein carrier protein"
				},
				{
					"name":"CUP3940_1277 mlaA; lipid asymmetry ABC transporter MlaABCDEF, lipoprotein MlaA\tK04754 mlaA; phospholipid-binding lipoprotein MlaA"
				},
				{
					"name":"CUP3940_1508 kpsS; capsular assembly complex, KDO transferase KpsS\tK07265 kpsS; capsular polysaccharide export protein"
				},
				{
					"name":"CUP3940_1507 kpsC; capsular assembly complex, KDO transferase KpsC (single domain)\tK07266 kpsC; capsular polysaccharide export protein"
				}
				]
			},
			{
				"name":"99994 Others",
				"children":[
				{
					"name":"CUP3940_0027 hemerythrin\tK07216 hr; hemerythrin"
				},
				{
					"name":"CUP3940_0627 hemerythrin\tK07216 hr; hemerythrin"
				},
				{
					"name":"CUP3940_0628 hemerythrin\tK07216 hr; hemerythrin"
				},
				{
					"name":"CUP3940_0934 hemerythrin\tK07216 hr; hemerythrin"
				}
				]
			}
			]
		},
		{
			"name":"09194 Poorly characterized",
			"children":[
			{
				"name":"99996 General function prediction only",
				"children":[
				{
					"name":"CUP3940_1043 CvpA family membrane protein\tK03558 cvpA; membrane protein required for colicin V production"
				},
				{
					"name":"CUP3940_0200 putative FlgJ-related protein (Bax domain)\tK03796 bax; Bax protein"
				},
				{
					"name":"CUP3940_0692 ctb; group III truncated hemoglobin\tK06886 glbN; hemoglobin"
				},
				{
					"name":"CUP3940_1375 BrkB\/YihY\/UPF0761 family membrane protein, possible virulence factor\tK07058 K07058; membrane protein"
				},
				{
					"name":"CUP3940_1048 SPOR domain-containing protein\tK03749 dedD; DedD protein"
				},
				{
					"name":"CUP3940_0042 PhnA domain-containing protein\tK06193 phnA; protein PhnA"
				}
				]
			},
			{
				"name":"99997 Function unknown",
				"children":[
				{
					"name":"CUP3940_0776 ankyrin domain-containing protein\tK06867 K06867; uncharacterized protein"
				},
				{
					"name":"CUP3940_1187 fibronectin type III domain-containing protein\tK06882 K06882; uncharacterized protein"
				},
				{
					"name":"CUP3940_0020 alpha\/beta hydrolase family protein\tK06889 K06889; uncharacterized protein"
				},
				{
					"name":"CUP3940_0231 DUF234 domain-containing protein\tK06921 K06921; uncharacterized protein"
				},
				{
					"name":"CUP3940_1221 putative [Fe-S] cluster-containing protein\tK06940 K06940; uncharacterized protein"
				},
				{
					"name":"CUP3940_0250 L-cystine uptake protein TcyP\tK06956 K06956; uncharacterized protein"
				},
				{
					"name":"CUP3940_0946 putative RNA-binding protein (KH domain)\tK06960 K06960; uncharacterized protein"
				},
				{
					"name":"CUP3940_0108 peptidase, C39 family\tK06992 K06992; uncharacterized protein"
				},
				{
					"name":"CUP3940_1541 peptidase, C39 family\tK06992 K06992; uncharacterized protein"
				},
				{
					"name":"CUP3940_1275 RND superfamily transporter\tK07003 K07003; uncharacterized protein"
				},
				{
					"name":"CUP3940_1385 nitroimidazol reductase (NimA) family protein\tK07005 K07005; uncharacterized protein"
				},
				{
					"name":"CUP3940_1374 sulfite exporter TauE\/SafE family protein\tK07090 K07090; uncharacterized protein"
				},
				{
					"name":"CUP3940_1477 sulfite exporter TauE\/SafE family protein\tK07090 K07090; uncharacterized protein"
				},
				{
					"name":"CUP3940_0007 phosphatase, PhoX family (DUF839 domain)\tK07093 K07093; uncharacterized protein"
				},
				{
					"name":"CUP3940_0786 membrane-associated metallophosphoesterase (YkuE domain)\tK07098 K07098; uncharacterized protein"
				},
				{
					"name":"CUP3940_0455 fdhT; formate dehydrogenase biogenesis protein FdhT\tK07112 K07112; uncharacterized protein"
				},
				{
					"name":"CUP3940_0017 NAD(P)-dependent oxidoreductase\tK07118 K07118; uncharacterized protein"
				},
				{
					"name":"CUP3940_1028 Sel1 domain-containing protein\tK07126 K07126; uncharacterized protein"
				},
				{
					"name":"CUP3940_0201 ATP-binding protein (AAA, DUF4143 domains)\tK07133 K07133; uncharacterized protein"
				},
				{
					"name":"CUP3940_0951 zinc ribbon domain-containing protein (DUF164 domain)\tK07164 K07164; uncharacterized protein"
				},
				{
					"name":"CUP3940_0872 membrane protein insertion efficiency factor, YidD family\tK08998 K08998; uncharacterized protein"
				},
				{
					"name":"CUP3940_0136 sulfite exporter TauE\/SafE family protein (DsbD_2 domain)\tK09792 K09792; uncharacterized protein"
				},
				{
					"name":"CUP3940_0730 DUF465 domain-containing protein\tK09794 K09794; uncharacterized protein"
				},
				{
					"name":"CUP3940_0566 putative periplasmic SGNH family hydrolase (SGNH_peri2 domain)\tK09795 K09795; uncharacterized protein"
				},
				{
					"name":"CUP3940_0758 divergent polysaccharide deacetylase\tK09798 K09798; uncharacterized protein"
				},
				{
					"name":"CUP3940_0407 toxin-antitoxin system, toxin component, BrnT family\tK09803 K09803; uncharacterized protein"
				},
				{
					"name":"CUP3940_0138 DUF507 domain-containing protein\tK09804 K09804; uncharacterized protein"
				},
				{
					"name":"CUP3940_1360 HARE-HTH domain-containing protein\tK09805 K09805; uncharacterized protein"
				},
				{
					"name":"CUP3940_0066 hypothetical protein\tK09859 K09859; uncharacterized protein"
				},
				{
					"name":"CUP3940_1080 peroxide stress protein YaaA\tK09861 K09861; uncharacterized protein"
				},
				{
					"name":"CUP3940_0658 TrkA domain-containing protein\tK09944 K09944; uncharacterized protein"
				},
				{
					"name":"CUP3940_0667 YhbP domain-containing protein\tK09979 K09979; uncharacterized protein"
				},
				{
					"name":"CUP3940_1198 putative transcriptional regulator (zinc finger domain)\tK09981 K09981; uncharacterized protein"
				},
				{
					"name":"CUP3940_1400 putative RNA-binding protein (DUF448 domain)\tK07742 ylxR; uncharacterized protein"
				}
				]
			}
			]
		}
		]
	}
	]
}