{
	"name":"ddr03009",
	"children":[
	{
		"name":"Eukaryotic type",
		"children":[
		{
			"name":"Sno RNPs",
			"children":[
			{
				"name":"Box C\/D snoRNPs"
			},
			{
				"name":"Box H\/ACA snoRNPs"
			}
			]
		},
		{
			"name":"90S particles",
			"children":[
			{
				"name":"U3 small nucleolar RNA-associated proteins"
			},
			{
				"name":"Helicases"
			},
			{
				"name":"GTPase"
			},
			{
				"name":"RNase",
				"children":[
				{
					"name":"Deide_03100 hypothetical protein\tK03685 rnc; ribonuclease III [EC:3.1.26.3]"
				}
				]
			},
			{
				"name":"Kinase"
			},
			{
				"name":"Other 90S particles"
			}
			]
		},
		{
			"name":"Pre-40S particles",
			"children":[
			{
				"name":"Kinases",
				"children":[
				{
					"name":"Deide_19990 putative RIO-like kinase\tK07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]"
				}
				]
			},
			{
				"name":"Export and cytoplasmic maturation factors"
			},
			{
				"name":"Other pre-40S particles"
			}
			]
		},
		{
			"name":"Pre-60S particles",
			"children":[
			{
				"name":"Helicases"
			},
			{
				"name":"GTPases"
			},
			{
				"name":"RNases",
				"children":[
				{
					"name":"RNase MRP"
				}
				]
			},
			{
				"name":"Kinases"
			},
			{
				"name":"Export and cytoplasmic maturation factors"
			},
			{
				"name":"55LCC heterohexameric ATPase complex"
			},
			{
				"name":"5-FMC complex"
			},
			{
				"name":"Ribosome quality control proteins"
			},
			{
				"name":"Other pre-60S particles"
			}
			]
		},
		{
			"name":"Other ribosome biogenesis factors",
			"children":[
			{
				"name":"Deide_18500 putative GTP-binding protein era\tK03595 era; GTPase"
			},
			{
				"name":"Deide_22200 putative GTP-binding protein\tK03979 obgE; GTPase [EC:3.6.5.-]"
			}
			]
		}
		]
	},
	{
		"name":"Prokaryotic type",
		"children":[
		{
			"name":"Sno RNPs",
			"children":[
			{
				"name":"Box C\/D snoRNPs"
			},
			{
				"name":"Box H\/ACA snoRNPs"
			}
			]
		},
		{
			"name":"rRNA transcription factors",
			"children":[
			{
				"name":"Deide_10380 putative Transcription elongation factor NusA\tK02600 nusA; transcription termination\/antitermination protein NusA"
			},
			{
				"name":"Deide_12270 nusB; putative N utilization substance protein B (Protein nusB)(NusB antitermination factor)\tK03625 nusB; transcription antitermination protein NusB"
			},
			{
				"name":"Deide_06090 nusG; putative transcription antitermination protein nusG\tK02601 nusG; transcription termination\/antitermination protein NusG"
			}
			]
		},
		{
			"name":"rRNA modification factors",
			"children":[
			{
				"name":"16S rRNA modification factors",
				"children":[
				{
					"name":"Deide_10490 putative dimethyladenosine transferase\tK02528 ksgA; 16S rRNA (adenine1518-N6\/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]"
				},
				{
					"name":"Deide_09520 putative methyltransferase RsmB, Sun protein\tK03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]"
				},
				{
					"name":"Deide_14390 putative rRNA (guanine-N(2)-)-methyltransferase\tK00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]"
				},
				{
					"name":"Deide_19770 putative methylase\tK08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]"
				},
				{
					"name":"Deide_13800 hypothetical protein\tK09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]"
				},
				{
					"name":"Deide_23400 gidB; putative methyltransferase (Glucose-inhibited division protein B)\tK03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]"
				},
				{
					"name":"Deide_08670 putative Methyltransferase\tK03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]"
				},
				{
					"name":"Deide_14620 putative Tetrapyrrole methylase family protein\tK07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]"
				}
				]
			},
			{
				"name":"23S rRNA modification factors",
				"children":[
				{
					"name":"Deide_04850 putative trmH family tRNA\/rRNA methyltransferase\tK03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]"
				},
				{
					"name":"Deide_14650 hypothetical protein\tK00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]"
				},
				{
					"name":"Deide_12770 hypothetical protein\tK06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]"
				},
				{
					"name":"Deide_14690 putative S-adenosylmethionine-dependent methyltransferase\tK06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]"
				},
				{
					"name":"Deide_17230 hypothetical protein\tK06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]"
				},
				{
					"name":"Deide_14010 hypothetical protein\tK06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]"
				},
				{
					"name":"Deide_04430 putative (Uracil-5)-methyltransferase\tK03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]"
				},
				{
					"name":"Deide_08650 putative RNA pseudouridylate synthase\tK06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]"
				},
				{
					"name":"Deide_09910 putative Ribosomal large subunit pseudouridine synthase, Rlu family\tK06180 rluD; 23S rRNA pseudouridine1911\/1915\/1917 synthase [EC:5.4.99.23]"
				},
				{
					"name":"Deide_16790 rluD; putative ribosomal large subunit pseudouridine synthase D\tK06180 rluD; 23S rRNA pseudouridine1911\/1915\/1917 synthase [EC:5.4.99.23]"
				},
				{
					"name":"Deide_22390 putative RNA pseudouridine synthase\tK06180 rluD; 23S rRNA pseudouridine1911\/1915\/1917 synthase [EC:5.4.99.23]"
				}
				]
			}
			]
		},
		{
			"name":"ribosomal protein modification factors",
			"children":[
			{
				"name":"Deide_10640 putative 16S rRNA-processing protein RimM\tK02860 rimM; 16S rRNA processing protein RimM"
			},
			{
				"name":"Deide_21110 putative 2-methylthioadenine synthetase\tK14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]"
			},
			{
				"name":"Deide_13790 putative Ribosomal protein L11 methyltransferase (L11 Mtase)\tK02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]"
			}
			]
		},
		{
			"name":"rRNA processing factors",
			"children":[
			{
				"name":"Deide_03100 hypothetical protein\tK03685 rnc; ribonuclease III [EC:3.1.26.3]"
			},
			{
				"name":"Deide_04280 putative Holliday junction resolvase YqgF\tK07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]"
			}
			]
		},
		{
			"name":"rRNA helicases",
			"children":[
			{
				"name":"Deide_1p00070 putative ATP-independent RNA helicase\tK05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]"
			}
			]
		},
		{
			"name":"GTPases",
			"children":[
			{
				"name":"Deide_18500 putative GTP-binding protein era\tK03595 era; GTPase"
			},
			{
				"name":"Deide_03610 putative GTPase engC; putative ribosome biogenesis GTPase RsgA\tK06949 rsgA; ribosome biogenesis GTPase \/ thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]"
			},
			{
				"name":"Deide_23290 engA; putative GTP-binding protein\tK03977 engA; GTPase"
			},
			{
				"name":"Deide_22200 putative GTP-binding protein\tK03979 obgE; GTPase [EC:3.6.5.-]"
			},
			{
				"name":"Deide_19040 hflX; putative GTP-binding protein, HflX subfamily\tK03665 hflX; GTPase"
			}
			]
		},
		{
			"name":"Other maturation factors",
			"children":[
			{
				"name":"Deide_08591 putative translation factor (SUA5)\tK07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]"
			},
			{
				"name":"Deide_14760 putative GTP diphosphokinase (ppGpp synthetase I) (RelA\/SpoT) (GTP pyrophosphokinase)\tK01139 spoT; GTP diphosphokinase \/ guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]"
			},
			{
				"name":"Deide_15450 rbfA; putative Ribosome-binding factor A\tK02834 rbfA; ribosome-binding factor A"
			},
			{
				"name":"Deide_10390 hypothetical protein\tK09748 rimP; ribosome maturation factor RimP"
			},
			{
				"name":"Deide_05390 hypothetical protein\tK14761 rlbA; ribosome-associated protein"
			},
			{
				"name":"Deide_19740 putative iojap-related protein\tK09710 ybeB; ribosome-associated protein"
			},
			{
				"name":"Deide_10740 putative metal-dependent hydrolase (metalloprotease)\tK07042 ybeY; probable rRNA maturation factor"
			},
			{
				"name":"Deide_17160 putative sigma 54 modulation protein\/ribosomal protein S30EA\tK05808 hpf; ribosome hibernation promoting factor"
			},
			{
				"name":"Deide_05530 engD; putative GTP-dependent nucleic acid-binding protein\tK06942 ychF; ribosome-binding ATPase"
			},
			{
				"name":"Deide_20550 hypothetical protein\tK07040 yceD; DUF177 domain-containing protein"
			}
			]
		}
		]
	},
	{
		"name":"Related small nucleolar RNAs",
		"children":[
		{
			"name":"Box C\/D snoRNAs",
			"children":[
			{
				"name":"SnoRNAs involved in processing reactions"
			},
			{
				"name":"SnoRNAs act as guides for 2'-O-ribose methylation"
			}
			]
		},
		{
			"name":"Box H\/ACA snoRNAs",
			"children":[
			{
				"name":"SnoRNAs involved in processing reactions"
			},
			{
				"name":"SnoRNAs act as guides for pseudouridynation"
			}
			]
		},
		{
			"name":"Other snoRNA"
		}
		]
	}
	]
}