{ "name":"gms00001", "children":[ { "name":"09100 Metabolism", "children":[ { "name":"09101 Carbohydrate metabolism", "children":[ { "name":"00010 Glycolysis \/ Gluconeogenesis [PATH:gms00010]", "children":[ { "name":"SOIL9_18500 Transcriptional regulator\/sugar kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2932 PE=4 SV=1: ROK\tK25026 glk; glucokinase [EC:2.7.1.2]" }, { "name":"SOIL9_18530 ROK family protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2979 PE=4 SV=1: ROK\tK25026 glk; glucokinase [EC:2.7.1.2]" }, { "name":"SOIL9_83660 glucokinase xylose repressor : Transcriptional regulator\/sugar kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6144 PE=4 SV=1: ROK\tK25026 glk; glucokinase [EC:2.7.1.2]" }, { "name":"SOIL9_54790 glucose-6-phosphate isomerase : Glucose-6-phosphate isomerase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_3532 PE=3 SV=1: PGI\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]" }, { "name":"SOIL9_63350 glucose-6-phosphate isomerase : Glucose-6-phosphate isomerase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=pgi PE=3 SV=1: PGI\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]" }, { "name":"SOIL9_10520 6-phosphofructokinase : 6-phosphofructokinase OS=bacterium UASB14 GN=U14_03344 PE=4 SV=1: PFK\tK21071 pfk; ATP-dependent phosphofructokinase \/ diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]" }, { "name":"SOIL9_59720 triosephosphate isomerase : Triosephosphate isomerase OS=Pelotomaculum thermopropionicum (strain DSM 13744 \/ JCM 10971 \/ SI) GN=TpiA PE=3 SV=1: TIM\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]" }, { "name":"SOIL9_11620 glyceraldehyde-3-phosphate dehydrogenase : Glyceraldehyde-3-phosphate dehydrogenase OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_1890 PE=3 SV=1: Gp_dh_N: Gp_dh_C\tK00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]" }, { "name":"SOIL9_11610 phosphoglycerate kinase : Phosphoglycerate kinase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=pgk PE=3 SV=1: PGK\tK00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]" }, { "name":"SOIL9_41790 phosphoglycerate mutase : Fructose-2,6-bisphosphatase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1498 PE=4 SV=1: His_Phos_1\tK15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]" }, { "name":"SOIL9_54780 phosphoglycerate mutase : Phosphoglycerate mutase OS=uncultured planctomycete GN=HGMM_F48A06C17 PE=4 SV=1: Metalloenzyme: PhosphMutase\tK15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]" }, { "name":"SOIL9_73600 phosphoglycerate mutase : Putative homoserine kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5943 PE=4 SV=1: Metalloenzyme: PhosphMutase\tK15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]" }, { "name":"SOIL9_22170 enolase : Enolase OS=Brevibacillus panacihumi W25 GN=eno PE=3 SV=1: Enolase_N: Enolase_C\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]" }, { "name":"SOIL9_58040 pyruvate kinase : Pyruvate kinase OS=Hyalangium minutum GN=DB31_5931 PE=3 SV=1: PK: PK_C\tK00873 PK; pyruvate kinase [EC:2.7.1.40]" }, { "name":"SOIL9_53970 pyruvate phosphate dikinase : Pyruvate, phosphate dikinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6461 PE=4 SV=1: PPDK_N: PEP-utilizers: PEP-utilizers_C\tK01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]" }, { "name":"SOIL9_31720 pyruvate dehydrogenase : Pyruvate dehydrogenase E1 component OS=Rhodopirellula europaea SH398 GN=RESH_06116 PE=4 SV=1: Transketolase_N: Transketolase_N\tK00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]" }, { "name":"SOIL9_31700 dihydrolipoamide acetyltransferase : Pyruvate dehydrogenase E2 component OS=Melioribacter roseus (strain JCM 17771 \/ P3M-2) GN=MROS_0858 PE=3 SV=1: Biotin_lipoyl: Biotin_lipoyl: E3_binding: 2-oxoacid_dh\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"SOIL9_79590 branched-chain alpha-keto acid dehydrogenase subunit e2 : Catalytic domain of components of various dehydrogenase complexes OS=Sulfolobus islandicus (strain Y.N.15.51 \/ Yellowstone #2) GN=YN1551_2054 PE=4 SV=1: Biotin_lipoyl: E3_binding: 2-oxoacid_dh\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"SOIL9_55200 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4534 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_74420 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6538 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_65220 2-oxoglutarate ferredoxin oxidoreductase subunit alpha : 2-oxoglutarate ferredoxin oxidoreductase alpha subunit OS=Planctomyces maris DSM 8797 GN=PM8797T_13373 PE=4 SV=1: POR: POR_N\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SOIL9_65210 2-oxoglutarate ferredoxin oxidoreductase subunit beta : 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate\/2-ketoisovalerate family OS=Chloracidobacterium thermophilum (strain B) GN=Cabther_B0326 PE=4 SV=1: TPP_enzyme_C\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SOIL9_08790 l-lactate dehydrogenase : L-lactate dehydrogenase OS=Caldilinea aerophila (strain DSM 14535 \/ JCM 11387 \/ NBRC 104270 \/ STL-6-O1) GN=ldh PE=3 SV=1: Ldh_1_N: Ldh_1_C\tK00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]" }, { "name":"SOIL9_38310 acetoin dehydrogenase : Alcohol dehydrogenase superfamily, zinc-containing OS=Rhodopseudomonas palustris (strain HaA2) GN=RPB_3806 PE=3 SV=1: ADH_N: ADH_zinc_N\tK00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase \/ alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]" }, { "name":"SOIL9_73480 alcohol dehydrogenase : Zinc-containing alcohol dehydrogenase superfamily protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_08987 PE=3 SV=1: ADH_N: ADH_zinc_N\tK12957 ahr; alcohol\/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]" }, { "name":"SOIL9_45700 zinc-binding dehydrogenase family protein : Alcohol dehydrogenase OS=Opitutaceae bacterium TAV5 GN=OPIT5_29055 PE=3 SV=1: ADH_N: ADH_zinc_N\tK13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]" }, { "name":"SOIL9_59540 betaine-aldehyde dehydrogenase : Aldehyde dehydrogenase (Acceptor) OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_2599 PE=3 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_82990 aldehyde dehydrogenase : Aldehyde dehydrogenase OS=uncultured planctomycete GN=HGMM_F16E03C18 PE=4 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_38680 acetyl-coenzyme a synthetase : Acetyl-coenzyme A synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=acsA PE=3 SV=1: AMP-binding: AMP-binding_C\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]" }, { "name":"SOIL9_27070 aldose 1-epimerase : Aldose 1-epimerase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0702 PE=4 SV=1: Aldose_epim\tK01785 galM; aldose 1-epimerase [EC:5.1.3.3]" }, { "name":"SOIL9_79330 aldose 1-epimerase : Aldose 1-epimerase OS=Sorangium cellulosum So0157-2 GN=SCE1572_08105 PE=3 SV=1: Aldose_epim\tK01785 galM; aldose 1-epimerase [EC:5.1.3.3]" }, { "name":"SOIL9_10290 had-superfamily subfamily variant 3 : Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2313 PE=4 SV=1: HAD_2\tK20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]" }, { "name":"SOIL9_08810 phosphoglucomutase : Phosphoglucomutase OS=Rhodovulum sp. PH10 GN=A33M_3475 PE=3 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III: PGM_PMM_IV\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"SOIL9_23680 phosphoglucomutase : Phosphoglucomutase OS=Rhodovulum sp. PH10 GN=A33M_3475 PE=3 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III: PGM_PMM_IV\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"SOIL9_27840 phosphoglucomutase : Uncharacterized protein OS=Candidatus Entotheonella sp. TSY2 GN=ETSY2_36385 PE=4 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"SOIL9_73360 Uncharacterized protein OS=Mesorhizobium sp. L48C026A00 GN=X737_20295 PE=4 SV=1\tK00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]" }, { "name":"SOIL9_05870 phosphoenolpyruvate carboxykinase : Phosphoenolpyruvate carboxykinase [GTP] OS=Granulicella mallensis (strain ATCC BAA-1857 \/ DSM 23137 \/ MP5ACTX8) GN=pckG PE=3 SV=1: PEPCK\tK01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]" } ] }, { "name":"00020 Citrate cycle (TCA cycle) [PATH:gms00020]", "children":[ { "name":"SOIL9_31440 citrate synthase : Citrate synthase OS=Nodularia spumigena CCY9414 GN=N9414_08180 PE=3 SV=1: Citrate_synt\tK01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]" }, { "name":"SOIL9_51270 citrate synthase : Citrate synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5364 PE=3 SV=1: Citrate_synt\tK01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]" }, { "name":"SOIL9_46590 aconitate hydratase : Aconitate hydratase OS=Candidatus Competibacter denitrificans Run_A_D11 GN=acnA PE=3 SV=1: Aconitase: Aconitase: Aconitase_C\tK27802 acnA; aconitate hydratase A \/ 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]" }, { "name":"SOIL9_79450 isocitrate dehydrogenase : Isocitrate dehydrogenase [NADP] OS=Catenulispora acidiphila (strain DSM 44928 \/ NRRL B-24433 \/ NBRC 102108 \/ JCM 14897) GN=Caci_7976 PE=3 SV=1: Iso_dh\tK00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]" }, { "name":"SOIL9_08550 isocitrate dehydrogenase : 3-isopropylmalate dehydrogenase OS=Halothermothrix orenii (strain H 168 \/ OCM 544 \/ DSM 9562) GN=Hore_08060 PE=3 SV=1: Iso_dh\tK00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]" }, { "name":"SOIL9_08600 isocitrate dehydrogenase : Isocitrate dehydrogenase OS=Hyalangium minutum GN=DB31_3860 PE=3 SV=1: Iso_dh\tK00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]" }, { "name":"SOIL9_74400 mfs transporter : 2-oxoglutarate dehydrogenase, E1 component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6536 PE=4 SV=1: E1_dh: Transket_pyr\tK00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]" }, { "name":"SOIL9_74410 dihydrolipoamide succinyltransferase : Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6537 PE=3 SV=1: Biotin_lipoyl: E3_binding: 2-oxoacid_dh\tK00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]" }, { "name":"SOIL9_55200 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4534 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_74420 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6538 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_65220 2-oxoglutarate ferredoxin oxidoreductase subunit alpha : 2-oxoglutarate ferredoxin oxidoreductase alpha subunit OS=Planctomyces maris DSM 8797 GN=PM8797T_13373 PE=4 SV=1: POR: POR_N\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SOIL9_65210 2-oxoglutarate ferredoxin oxidoreductase subunit beta : 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate\/2-ketoisovalerate family OS=Chloracidobacterium thermophilum (strain B) GN=Cabther_B0326 PE=4 SV=1: TPP_enzyme_C\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SOIL9_67440 succinyl-synthetase subunit alpha : Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Cystobacter fuscus DSM 2262 GN=D187_007618 PE=3 SV=1: CoA_binding: Ligase_CoA\tK01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]" }, { "name":"SOIL9_67470 succinyl-synthetase subunit beta : Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=sucC PE=3 SV=1: ATP-grasp_2: Ligase_CoA\tK01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]" }, { "name":"SOIL9_13680 succinate dehydrogenase : Succinate dehydrogenase subunit A OS=Koribacter versatilis (strain Ellin345) GN=Acid345_1384 PE=4 SV=1: FAD_binding_2: Succ_DH_flav_C\tK00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]" }, { "name":"SOIL9_14190 succinate dehydrogenase or fumarate flavoprotein subunit : Succinate dehydrogenase or fumarate reductase, flavoprotein subunit OS=Leptospira kirschneri serovar Bim str. 1051 GN=sdhA PE=4 SV=1: FAD_binding_2: Succ_DH_flav_C\tK00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]" }, { "name":"SOIL9_13670 fumarate reductase : Fumarate reductase OS=uncultured bacterium lac160 PE=4 SV=1: Fer2_3: Fer4_8\tK00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]" }, { "name":"SOIL9_47000 succinate dehydrogenase : Succinate dehydrogenase and fumarate reductase iron-sulfur protein OS=Leptospira meyeri serovar Semaranga str. Veldrot Semarang 173 GN=LEP1GSC196_3454 PE=4 SV=1: Fer2_3: Fer4_8\tK00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]" }, { "name":"SOIL9_14180 Succinate dehydrogenase cytochrome B subunit, b558 family OS=Leptospira sp. B5-022 GN=sdhC PE=4 SV=1\tK00241 sdhC; succinate dehydrogenase cytochrome b subunit" }, { "name":"SOIL9_04060 fumarate hydratase : Fumarate hydratase class II OS=Chroococcidiopsis thermalis PCC 7203 GN=fumC PE=3 SV=1: Lyase_1: FumaraseC_C\tK01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]" }, { "name":"SOIL9_11650 malate dehydrogenase : Malate dehydrogenase OS=Leptospira borgpetersenii str. UI 09149 GN=mdh PE=3 SV=1: Ldh_1_N: Ldh_1_C\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]" }, { "name":"SOIL9_27740 pyruvate carboxylase : Pyruvate carboxylase OS=Blastopirellula marina DSM 3645 GN=DSM3645_29761 PE=4 SV=1: CPSase_L_chain: CPSase_L_D2: Biotin_carb_C: HMGL-like: PYC_OADA: Biotin_lipoyl\tK01958 PC; pyruvate carboxylase [EC:6.4.1.1]" }, { "name":"SOIL9_05870 phosphoenolpyruvate carboxykinase : Phosphoenolpyruvate carboxykinase [GTP] OS=Granulicella mallensis (strain ATCC BAA-1857 \/ DSM 23137 \/ MP5ACTX8) GN=pckG PE=3 SV=1: PEPCK\tK01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]" }, { "name":"SOIL9_31720 pyruvate dehydrogenase : Pyruvate dehydrogenase E1 component OS=Rhodopirellula europaea SH398 GN=RESH_06116 PE=4 SV=1: Transketolase_N: Transketolase_N\tK00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]" }, { "name":"SOIL9_31700 dihydrolipoamide acetyltransferase : Pyruvate dehydrogenase E2 component OS=Melioribacter roseus (strain JCM 17771 \/ P3M-2) GN=MROS_0858 PE=3 SV=1: Biotin_lipoyl: Biotin_lipoyl: E3_binding: 2-oxoacid_dh\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"SOIL9_79590 branched-chain alpha-keto acid dehydrogenase subunit e2 : Catalytic domain of components of various dehydrogenase complexes OS=Sulfolobus islandicus (strain Y.N.15.51 \/ Yellowstone #2) GN=YN1551_2054 PE=4 SV=1: Biotin_lipoyl: E3_binding: 2-oxoacid_dh\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" } ] }, { "name":"00030 Pentose phosphate pathway [PATH:gms00030]", "children":[ { "name":"SOIL9_54790 glucose-6-phosphate isomerase : Glucose-6-phosphate isomerase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_3532 PE=3 SV=1: PGI\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]" }, { "name":"SOIL9_63350 glucose-6-phosphate isomerase : Glucose-6-phosphate isomerase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=pgi PE=3 SV=1: PGI\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]" }, { "name":"SOIL9_08930 glucose-6-phosphate 1-dehydrogenase : Glucose-6-phosphate 1-dehydrogenase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=zwf PE=3 SV=1: G6PD_N: G6PD_C\tK00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]" }, { "name":"SOIL9_23700 glucose-6-phosphate 1-dehydrogenase : Glucose-6-phosphate 1-dehydrogenase OS=uncultured bacterium GN=zwf PE=3 SV=1: G6PD_N: G6PD_C\tK00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]" }, { "name":"SOIL9_59120 6-phosphogluconolactonase : 6-phosphogluconolactonase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1125 PE=4 SV=1: Lactonase\tK07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]" }, { "name":"SOIL9_83270 6-phosphogluconolactonase : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_27407 PE=4 SV=1: Lactonase\tK07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]" }, { "name":"SOIL9_23710 6-phosphogluconate dehydrogenase : 6-phosphogluconate dehydrogenase, decarboxylating OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0946 PE=4 SV=1: NAD_binding_2: 6PGD: 6PGD\tK00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]" }, { "name":"SOIL9_73980 6-phosphogluconate dehydrogenase : 6-phosphogluconate dehydrogenase, decarboxylating OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1626 PE=3 SV=1: NAD_binding_2: 6PGD\tK00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]" }, { "name":"SOIL9_57690 ribulose-phosphate 3-epimerase : Ribulose-phosphate 3-epimerase OS=sediment metagenome GN=rpe PE=4 SV=1: Ribul_P_3_epim\tK01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]" }, { "name":"SOIL9_74760 transketolase : Transketolase OS=Granulibacter bethesdensis CGDNIH3 GN=GbCGDNIH3_0856 PE=4 SV=1: Transketolase_N: Transket_pyr: Transketolase_C\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"SOIL9_26710 transaldolase : Transaldolase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=tal PE=3 SV=1: Transaldolase\tK00616 TALDO1; transaldolase [EC:2.2.1.2]" }, { "name":"SOIL9_49880 transaldolase : Transaldolase OS=Sorangium cellulosum (strain So ce56) GN=sce3599 PE=3 SV=1: Transaldolase\tK00616 TALDO1; transaldolase [EC:2.2.1.2]" }, { "name":"SOIL9_03540 ribose 5-phosphate isomerase : Ribose-5-phosphate isomerase A OS=Candidatus Methylomirabilis oxyfera GN=rpiA PE=3 SV=1: Rib_5-P_isom_A\tK01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]" }, { "name":"SOIL9_62440 ribose 5-phosphate isomerase : Ribose-5-phosphate isomerase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_1998 PE=4 SV=1: LacAB_rpiB\tK01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]" }, { "name":"SOIL9_07540 phosphoketolase : Probable phosphoketolase OS=Rhizobium fredii (strain HH103) GN=xfp PE=3 SV=1: XFP_N: XFP: XFP_C\tK01621 xfp; xylulose-5-phosphate\/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]" }, { "name":"SOIL9_08780 phosphoketolase : Probable phosphoketolase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2784 PE=3 SV=1: XFP_N: XFP: XFP_C\tK01621 xfp; xylulose-5-phosphate\/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]" }, { "name":"SOIL9_37760 deoxyribose-phosphate aldolase : Deoxyribose-phosphate aldolase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=deoC PE=3 SV=1: DeoC\tK01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]" }, { "name":"SOIL9_53020 ribokinase : Ribokinase OS=Caldilinea aerophila (strain DSM 14535 \/ JCM 11387 \/ NBRC 104270 \/ STL-6-O1) GN=rbsK PE=4 SV=1: PfkB\tK00852 rbsK; ribokinase [EC:2.7.1.15]" }, { "name":"SOIL9_08810 phosphoglucomutase : Phosphoglucomutase OS=Rhodovulum sp. PH10 GN=A33M_3475 PE=3 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III: PGM_PMM_IV\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"SOIL9_23680 phosphoglucomutase : Phosphoglucomutase OS=Rhodovulum sp. PH10 GN=A33M_3475 PE=3 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III: PGM_PMM_IV\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"SOIL9_27840 phosphoglucomutase : Uncharacterized protein OS=Candidatus Entotheonella sp. TSY2 GN=ETSY2_36385 PE=4 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"SOIL9_03320 ribose-phosphate pyrophosphokinase : Ribose-phosphate pyrophosphokinase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=prs PE=3 SV=1: Pribosyltran_N: Pribosyl_synth\tK00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]" }, { "name":"SOIL9_10130 2-dehydro-3-deoxyphosphogluconate aldolase : Entner-Doudoroff aldolase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1080 PE=4 SV=1: Aldolase\tK01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase \/ (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]" }, { "name":"SOIL9_27200 short-chain dehydrogenase reductase sdr : Short-chain dehydrogenase OS=Devosia riboflavina GN=JP75_00820 PE=4 SV=1: adh_short_C2\tK00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]" }, { "name":"SOIL9_22630 heme-binding protein : Membrane-bound dehydrogenase domain protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_0686 PE=4 SV=1: GSDH: HEAT_2: Cytochrom_C\tK00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]" }, { "name":"SOIL9_69730 heme-binding protein : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_19480 PE=4 SV=1: GSDH: HEAT_2: Cytochrom_C\tK00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]" }, { "name":"SOIL9_07210 Gluconolactonase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5868 PE=4 SV=1: SGL\tK01053 gnl; gluconolactonase [EC:3.1.1.17]" }, { "name":"SOIL9_42460 Uncharacterized protein OS=Dysgonomonas gadei ATCC BAA-286 GN=HMPREF9455_03868 PE=4 SV=1: SGL\tK01053 gnl; gluconolactonase [EC:3.1.1.17]" }, { "name":"SOIL9_69090 gluconolactonase : Gluconolactonase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2387 PE=4 SV=1: Esterase: SGL\tK01053 gnl; gluconolactonase [EC:3.1.1.17]" }, { "name":"SOIL9_70870 gluconate kinase : Thermosensitive gluconokinase OS=Stigmatella aurantiaca (strain DW4\/3-1) GN=idnK PE=4 SV=1: SKI\tK00851 idnK; gluconokinase [EC:2.7.1.12]" }, { "name":"SOIL9_10140 Ribokinase-like domain-containing protein OS=uncultured organism GN=FLSS-18_0020 PE=4 SV=1: PfkB\tK00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]" }, { "name":"SOIL9_72970 ribokinase : PfkB domain protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2098 PE=4 SV=1: PfkB\tK00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]" }, { "name":"SOIL9_18080 glycerate kinase : Putative uncharacterized protein OS=uncultured Desulfobacterium sp. GN=N47_E46250 PE=4 SV=1: DUF4147: MOFRL\tK11529 gck; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"SOIL9_10520 6-phosphofructokinase : 6-phosphofructokinase OS=bacterium UASB14 GN=U14_03344 PE=4 SV=1: PFK\tK21071 pfk; ATP-dependent phosphofructokinase \/ diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]" } ] }, { "name":"00040 Pentose and glucuronate interconversions [PATH:gms00040]", "children":[ { "name":"SOIL9_34710 glucuronate isomerase : Uronate isomerase OS=uncultured Acidobacteria bacterium A2 PE=4 SV=1: UxaC\tK01812 uxaC; glucuronate isomerase [EC:5.3.1.12]" }, { "name":"SOIL9_39680 Uncharacterized protein OS=Solibacter usitatus (strain Ellin6076) GN=Acid_7772 PE=4 SV=1\tK21619 uxaE; tagaturonate epimerase [EC:5.1.2.7]" }, { "name":"SOIL9_09510 udp-glucose 6-dehydrogenase : Nucleotide sugar dehydrogenase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0060 PE=3 SV=1: UDPG_MGDP_dh_N: UDPG_MGDP_dh: UDPG_MGDP_dh_C\tK00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]" }, { "name":"SOIL9_49810 udp-glucose 6-dehydrogenase : Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1: UDPG_MGDP_dh_N: UDPG_MGDP_dh: UDPG_MGDP_dh_C\tK00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]" }, { "name":"SOIL9_23940 utp--glucose-1-phosphate uridylyltransferase : Putative UTP--glucose-1-phosphate uridylyltransferase OS=Caldilinea aerophila (strain DSM 14535 \/ JCM 11387 \/ NBRC 104270 \/ STL-6-O1) GN=CLDAP_34490 PE=4 SV=1: NTP_transferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]" }, { "name":"SOIL9_57690 ribulose-phosphate 3-epimerase : Ribulose-phosphate 3-epimerase OS=sediment metagenome GN=rpe PE=4 SV=1: Ribul_P_3_epim\tK01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]" }, { "name":"SOIL9_00720 xylulokinase : Xylulokinase OS=Thermoanaerobacter wiegelii Rt8.B1 GN=Thewi_0221 PE=3 SV=1: FGGY_N: FGGY_C\tK00854 xylB; xylulokinase [EC:2.7.1.17]" }, { "name":"SOIL9_76860 xylose isomerase : Xylose isomerase OS=Blastopirellula marina DSM 3645 GN=xylA PE=3 SV=1: AP_endonuc_2\tK01805 xylA; xylose isomerase [EC:5.3.1.5]" }, { "name":"SOIL9_79320 dehydratase : Putative dehydratase, YjhG\/YagF family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6306 PE=4 SV=1: ILVD_EDD\tK22396 yjhG; xylonate dehydratase [EC:4.2.1.82]" }, { "name":"SOIL9_38880 fumarylacetoacetate hydrolase : Fumarylacetoacetate (FAA) hydrolase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_0388 PE=4 SV=1: FAA_hydrolase\tK14259 kdaD; 2-dehydro-3-deoxy-D-arabinonate dehydratase [EC:4.2.1.141]" }, { "name":"SOIL9_05860 -dioxovalerate dehydrogenase : NADP-dependent fatty aldehyde dehydrogenase OS=Acidobacterium capsulatum (strain ATCC 51196 \/ DSM 11244 \/ JCM 7670) GN=aldH PE=4 SV=1: Aldedh\tK13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]" } ] }, { "name":"00051 Fructose and mannose metabolism [PATH:gms00051]", "children":[ { "name":"SOIL9_58960 carbohydrate family : Kinase, PfkB family OS=Porphyromonas sp. oral taxon 278 str. W7784 GN=HMPREF1556_00125 PE=4 SV=1: PfkB\tK00847 E2.7.1.4; fructokinase [EC:2.7.1.4]" }, { "name":"SOIL9_00430 mannose-6-phosphate isomerase : Phosphomannose isomerase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2015 PE=4 SV=1: PMI_typeI\tK01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]" }, { "name":"SOIL9_17130 phosphomannomutase : Phosphoglucomutase\/phosphomannomutase family protein OS=Rhodopirellula europaea 6C GN=RE6C_01147 PE=3 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III: PGM_PMM_IV\tK01840 manB; phosphomannomutase [EC:5.4.2.8]" }, { "name":"SOIL9_40190 mannose-1-phosphate guanylyltransferase : Mannose-1-phosphate guanylyltransferase OS=Blastopirellula marina DSM 3645 GN=DSM3645_16810 PE=4 SV=1: NTP_transferase: MannoseP_isomer\tK00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]" }, { "name":"SOIL9_38280 mannose-1-phosphate guanyltransferase : Uncharacterized protein OS=uncultured bacterium GN=ACD_20C00350G0017 PE=4 SV=1: NTP_transferase\tK00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]" }, { "name":"SOIL9_61700 gdp-mannose -dehydratase : GDP-mannose 4,6-dehydratase OS=Sphaerobacter thermophilus (strain DSM 20745 \/ S 6022) GN=gmd PE=3 SV=1: Epimerase\tK01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]" }, { "name":"SOIL9_33220 gdp-l-fucose synthase : GDP-L-fucose synthase OS=Anoxybacillus flavithermus AK1 GN=fcl PE=3 SV=1: Epimerase\tK02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]" }, { "name":"SOIL9_46320 nad-dependent dehydratase : GDP-L-fucose synthase OS=Thermosynechococcus sp. NK55a GN=wcaG PE=3 SV=1: Epimerase\tK02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]" }, { "name":"SOIL9_47670 nad-dependent dehydratase : Marine sediment metagenome DNA, contig: S01H1_S31473 (Fragment) OS=marine sediment metagenome GN=S01H1_69638 PE=3 SV=1: Epimerase\tK02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]" }, { "name":"SOIL9_53930 nad-dependent dehydratase : GDP-L-fucose synthase OS=Brevibacillus panacihumi W25 GN=fcl PE=3 SV=1: Epimerase\tK02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]" }, { "name":"SOIL9_18330 3-oxoacyl-acp reductase : Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5872 PE=3 SV=1: adh_short\tK21883 lra5; 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) [EC:1.1.1.401]" }, { "name":"SOIL9_49820 short-chain alcohol dehydrogenase : (S)-1-phenylethanol dehydrogenase Ped OS=Methyloglobulus morosus KoM1 GN=ped PE=3 SV=1: adh_short\tK21883 lra5; 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) [EC:1.1.1.401]" }, { "name":"SOIL9_10520 6-phosphofructokinase : 6-phosphofructokinase OS=bacterium UASB14 GN=U14_03344 PE=4 SV=1: PFK\tK21071 pfk; ATP-dependent phosphofructokinase \/ diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]" }, { "name":"SOIL9_76860 xylose isomerase : Xylose isomerase OS=Blastopirellula marina DSM 3645 GN=xylA PE=3 SV=1: AP_endonuc_2\tK01805 xylA; xylose isomerase [EC:5.3.1.5]" }, { "name":"SOIL9_59720 triosephosphate isomerase : Triosephosphate isomerase OS=Pelotomaculum thermopropionicum (strain DSM 13744 \/ JCM 10971 \/ SI) GN=TpiA PE=3 SV=1: TIM\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]" }, { "name":"SOIL9_64440 glycosyl hydrolase family 32 : Beta-fructosidase, levanase\/invertase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4623 PE=4 SV=1: Glyco_hydro_32N: Glyco_hydro_32C\tK03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]" }, { "name":"SOIL9_61690 Marine sediment metagenome DNA, contig: S03H2_L04007 (Fragment) OS=marine sediment metagenome GN=S03H2_17566 PE=4 SV=1: Epimerase\tK15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]" }, { "name":"SOIL9_62440 ribose 5-phosphate isomerase : Ribose-5-phosphate isomerase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_1998 PE=4 SV=1: LacAB_rpiB\tK01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]" } ] }, { "name":"00052 Galactose metabolism [PATH:gms00052]", "children":[ { "name":"SOIL9_27070 aldose 1-epimerase : Aldose 1-epimerase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0702 PE=4 SV=1: Aldose_epim\tK01785 galM; aldose 1-epimerase [EC:5.1.3.3]" }, { "name":"SOIL9_79330 aldose 1-epimerase : Aldose 1-epimerase OS=Sorangium cellulosum So0157-2 GN=SCE1572_08105 PE=3 SV=1: Aldose_epim\tK01785 galM; aldose 1-epimerase [EC:5.1.3.3]" }, { "name":"SOIL9_17580 galactose-1-phosphate uridylyltransferase : Galactose-1-phosphate uridylyltransferase OS=Leptospirillum ferriphilum YSK GN=Y981_12430 PE=4 SV=1: GalP_UDP_transf\tK00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]" }, { "name":"SOIL9_39640 nad-dependent epimerase dehydratase : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_21943 PE=4 SV=1: Epimerase\tK01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]" }, { "name":"SOIL9_49800 nucleoside-diphosphate sugar epimerase : Nucleoside-diphosphate sugar epimerase OS=Skermanella stibiiresistens SB22 GN=N825_01140 PE=4 SV=1: Epimerase\tK01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]" }, { "name":"SOIL9_84500 udp-glucose 4-epimerase : UDP-glucose 4-epimerase OS=Coraliomargarita akajimensis (strain DSM 45221 \/ IAM 15411 \/ JCM 23193 \/ KCTC 12865) GN=Caka_1849 PE=3 SV=1: Epimerase: Epimerase_Csub\tK01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]" }, { "name":"SOIL9_23940 utp--glucose-1-phosphate uridylyltransferase : Putative UTP--glucose-1-phosphate uridylyltransferase OS=Caldilinea aerophila (strain DSM 14535 \/ JCM 11387 \/ NBRC 104270 \/ STL-6-O1) GN=CLDAP_34490 PE=4 SV=1: NTP_transferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]" }, { "name":"SOIL9_08810 phosphoglucomutase : Phosphoglucomutase OS=Rhodovulum sp. PH10 GN=A33M_3475 PE=3 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III: PGM_PMM_IV\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"SOIL9_23680 phosphoglucomutase : Phosphoglucomutase OS=Rhodovulum sp. PH10 GN=A33M_3475 PE=3 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III: PGM_PMM_IV\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"SOIL9_27840 phosphoglucomutase : Uncharacterized protein OS=Candidatus Entotheonella sp. TSY2 GN=ETSY2_36385 PE=4 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"SOIL9_18500 Transcriptional regulator\/sugar kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2932 PE=4 SV=1: ROK\tK25026 glk; glucokinase [EC:2.7.1.2]" }, { "name":"SOIL9_18530 ROK family protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2979 PE=4 SV=1: ROK\tK25026 glk; glucokinase [EC:2.7.1.2]" }, { "name":"SOIL9_83660 glucokinase xylose repressor : Transcriptional regulator\/sugar kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6144 PE=4 SV=1: ROK\tK25026 glk; glucokinase [EC:2.7.1.2]" }, { "name":"SOIL9_33280 udp-galactopyranose mutase : Udp-galactopyranose mutase, putative OS=Heliobacterium modesticaldum (strain ATCC 51547 \/ Ice1) GN=glf PE=4 SV=1: NAD_binding_8: GLF\tK01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]" }, { "name":"SOIL9_10520 6-phosphofructokinase : 6-phosphofructokinase OS=bacterium UASB14 GN=U14_03344 PE=4 SV=1: PFK\tK21071 pfk; ATP-dependent phosphofructokinase \/ diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]" }, { "name":"SOIL9_39470 tagatose-bisphosphate aldolase : Tagatose-1,6-bisphosphate aldolase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0331 PE=4 SV=1: DeoC\tK01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]" }, { "name":"SOIL9_10770 2-oxo-3-deoxygalactonate 6-phosphate aldolase : Mandelate racemase\/muconate lactonizing protein OS=Rhodopirellula maiorica SM1 GN=RMSM_02062 PE=4 SV=1: MR_MLE_N: MR_MLE_C\tK01684 dgoD; galactonate dehydratase [EC:4.2.1.6]" } ] }, { "name":"00053 Ascorbate and aldarate metabolism [PATH:gms00053]", "children":[ { "name":"SOIL9_09510 udp-glucose 6-dehydrogenase : Nucleotide sugar dehydrogenase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0060 PE=3 SV=1: UDPG_MGDP_dh_N: UDPG_MGDP_dh: UDPG_MGDP_dh_C\tK00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]" }, { "name":"SOIL9_49810 udp-glucose 6-dehydrogenase : Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1: UDPG_MGDP_dh_N: UDPG_MGDP_dh: UDPG_MGDP_dh_C\tK00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]" }, { "name":"SOIL9_07210 Gluconolactonase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5868 PE=4 SV=1: SGL\tK01053 gnl; gluconolactonase [EC:3.1.1.17]" }, { "name":"SOIL9_42460 Uncharacterized protein OS=Dysgonomonas gadei ATCC BAA-286 GN=HMPREF9455_03868 PE=4 SV=1: SGL\tK01053 gnl; gluconolactonase [EC:3.1.1.17]" }, { "name":"SOIL9_69090 gluconolactonase : Gluconolactonase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2387 PE=4 SV=1: Esterase: SGL\tK01053 gnl; gluconolactonase [EC:3.1.1.17]" }, { "name":"SOIL9_59540 betaine-aldehyde dehydrogenase : Aldehyde dehydrogenase (Acceptor) OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_2599 PE=3 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_82990 aldehyde dehydrogenase : Aldehyde dehydrogenase OS=uncultured planctomycete GN=HGMM_F16E03C18 PE=4 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_38880 fumarylacetoacetate hydrolase : Fumarylacetoacetate (FAA) hydrolase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_0388 PE=4 SV=1: FAA_hydrolase\tK14259 kdaD; 2-dehydro-3-deoxy-D-arabinonate dehydratase [EC:4.2.1.141]" }, { "name":"SOIL9_05860 -dioxovalerate dehydrogenase : NADP-dependent fatty aldehyde dehydrogenase OS=Acidobacterium capsulatum (strain ATCC 51196 \/ DSM 11244 \/ JCM 7670) GN=aldH PE=4 SV=1: Aldedh\tK13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]" }, { "name":"SOIL9_21330 nad-dependent dehydratase : Putative oxidoreductase protein OS=Thermomicrobium roseum (strain ATCC 27502 \/ DSM 5159 \/ P-2) GN=trd_1948 PE=4 SV=1: Epimerase\tK18981 udh; uronate dehydrogenase [EC:1.1.1.203]" }, { "name":"SOIL9_12620 mandelate racemase : Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0917 PE=4 SV=1: MR_MLE_N: MR_MLE_C\tK18983 gci; D-galactarolactone cycloisomerase [EC:5.5.1.27]" } ] }, { "name":"00500 Starch and sucrose metabolism [PATH:gms00500]", "children":[ { "name":"SOIL9_23940 utp--glucose-1-phosphate uridylyltransferase : Putative UTP--glucose-1-phosphate uridylyltransferase OS=Caldilinea aerophila (strain DSM 14535 \/ JCM 11387 \/ NBRC 104270 \/ STL-6-O1) GN=CLDAP_34490 PE=4 SV=1: NTP_transferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]" }, { "name":"SOIL9_49940 glucose-1-phosphate cytidylyltransferase : Glucose-1-phosphate cytidylyltransferase OS=Stanieria cyanosphaera (strain ATCC 29371 \/ PCC 7437) GN=Sta7437_1481 PE=4 SV=1: NTP_transferase\tK00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]" }, { "name":"SOIL9_54620 glucose-1-phosphate adenylyltransferase : Glucose-1-phosphate adenylyltransferase OS=Blastopirellula marina DSM 3645 GN=glgC PE=3 SV=1: NTP_transferase\tK00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]" }, { "name":"SOIL9_80220 glucose-1-phosphate adenylyltransferase : Glucose-1-phosphate adenylyltransferase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1974 PE=3 SV=1: NTP_transferase\tK00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]" }, { "name":"SOIL9_42560 glycogen synthase : Glycogen synthase OS=Blastopirellula marina DSM 3645 GN=glgA PE=3 SV=1: Glyco_transf_5: Glycos_transf_1\tK00703 glgA; starch synthase [EC:2.4.1.21]" }, { "name":"SOIL9_06670 glycogen branching protein : 1,4-alpha-glucan branching enzyme GlgB OS=Nitrolancea hollandica Lb GN=glgB PE=3 SV=1: CBM_48: Alpha-amylase: Alpha-amylase: Alpha-amylase_C\tK00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]" }, { "name":"SOIL9_17350 -alpha-glucan branching protein : 1,4-alpha-glucan branching enzyme OS=Candidatus Competibacter denitrificans Run_A_D11 GN=BN873_630010 PE=4 SV=1: CBM_48: Alpha-amylase: Alpha-amylase: Alpha-amylase_C\tK00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]" }, { "name":"SOIL9_33870 -alpha-glucan branching protein : 1,4-alpha-glucan branching enzyme OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7136 PE=4 SV=1: CBM_48: Alpha-amylase: Alpha-amylase_C\tK00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]" }, { "name":"SOIL9_08760 glycogen phosphorylase : Alpha-1,4 glucan phosphorylase OS=Rhodopirellula maiorica SM1 GN=RMSM_03252 PE=3 SV=1: Phosphorylase\tK00688 PYG; glycogen phosphorylase [EC:2.4.1.1]" }, { "name":"SOIL9_23690 maltodextrin phosphorylase : Alpha-1,4 glucan phosphorylase OS=Azospirillum brasilense Sp245 GN=glgP PE=3 SV=1: Phosphorylase\tK00688 PYG; glycogen phosphorylase [EC:2.4.1.1]" }, { "name":"SOIL9_40170 alpha-glucan phosphorylase : Alpha-glucan phosphorylase OS=Geobacter lovleyi (strain ATCC BAA-1151 \/ DSM 17278 \/ SZ) GN=Glov_3322 PE=3 SV=1: DUF3417: Phosphorylase\tK00688 PYG; glycogen phosphorylase [EC:2.4.1.1]" }, { "name":"SOIL9_13030 cytochrome c oxidase subunit ii : Glucan 1,4-alpha-maltohexaosidase OS=Microcoleus vaginatus FGP-2 GN=MicvaDRAFT_1443 PE=4 SV=1: Alpha-amylase\tK01176 AMY; alpha-amylase [EC:3.2.1.1]" }, { "name":"SOIL9_33570 alpha-amylase : Alpha amylase catalytic region OS=Methylobacterium nodulans (strain ORS2060 \/ LMG 21967) GN=Mnod_0201 PE=4 SV=1: Alpha-amylase\tK01176 AMY; alpha-amylase [EC:3.2.1.1]" }, { "name":"SOIL9_43910 alpha amylase : Alpha amylase catalytic region OS=Methylobacterium nodulans (strain ORS2060 \/ LMG 21967) GN=Mnod_0201 PE=4 SV=1: Alpha-amylase\tK01176 AMY; alpha-amylase [EC:3.2.1.1]" }, { "name":"SOIL9_25320 4-alpha-glucanotransferase : 4-alpha-glucanotransferase OS=Roseiflexus castenholzii (strain DSM 13941 \/ HLO8) GN=Rcas_2645 PE=3 SV=1: Glyco_hydro_77\tK00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]" }, { "name":"SOIL9_03610 glycogen debranching enzyme : Isoamylase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0445 PE=4 SV=1: CBM_48: Alpha-amylase\tK01214 ISA; isoamylase [EC:3.2.1.68]" }, { "name":"SOIL9_08660 glycogen debranching protein : Glycogen operon protein GlgX homolog OS=Rhodopirellula maiorica SM1 GN=RMSM_03253 PE=4 SV=1: CBM_48: Alpha-amylase\tK01214 ISA; isoamylase [EC:3.2.1.68]" }, { "name":"SOIL9_82330 glycogen debranching protein : Glycogen operon protein GlgX homolog OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2400 PE=4 SV=1: CBM_48: Alpha-amylase\tK01214 ISA; isoamylase [EC:3.2.1.68]" }, { "name":"SOIL9_42380 malto-oligosyltrehalose synthase : Malto-oligosyltrehalose synthase OS=Oscillochloris trichoides DG-6 GN=OSCT_2032 PE=4 SV=1: Alpha-amylase\tK06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]" }, { "name":"SOIL9_42390 malto-oligosyltrehalose trehalohydrolase : Malto-oligosyltrehalose trehalohydrolase OS=Desulfovibrio sp. FW1012B GN=DFW101_2128 PE=3 SV=1: CBM_48: Alpha-amylase: DUF3459\tK01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]" }, { "name":"SOIL9_80990 malto-oligosyltrehalose trehalohydrolase : Malto-oligosyltrehalose trehalohydrolase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5854 PE=3 SV=1: CBM_48: Alpha-amylase: DUF3459\tK01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]" }, { "name":"SOIL9_81060 malto-oligosyltrehalose trehalohydrolase : Malto-oligosyltrehalose trehalohydrolase OS=Moorella thermoacetica (strain ATCC 39073) GN=Moth_1809 PE=3 SV=1: CBM_48: Alpha-amylase: DUF3459\tK01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]" }, { "name":"SOIL9_82340 trehalase : Alpha,alpha-trehalase OS=Herpetosiphon aurantiacus (strain ATCC 23779 \/ DSM 785) GN=Haur_2832 PE=4 SV=1: Trehalase: Trehalase\tK01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]" }, { "name":"SOIL9_08810 phosphoglucomutase : Phosphoglucomutase OS=Rhodovulum sp. PH10 GN=A33M_3475 PE=3 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III: PGM_PMM_IV\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"SOIL9_23680 phosphoglucomutase : Phosphoglucomutase OS=Rhodovulum sp. PH10 GN=A33M_3475 PE=3 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III: PGM_PMM_IV\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"SOIL9_27840 phosphoglucomutase : Uncharacterized protein OS=Candidatus Entotheonella sp. TSY2 GN=ETSY2_36385 PE=4 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"SOIL9_18500 Transcriptional regulator\/sugar kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2932 PE=4 SV=1: ROK\tK25026 glk; glucokinase [EC:2.7.1.2]" }, { "name":"SOIL9_18530 ROK family protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2979 PE=4 SV=1: ROK\tK25026 glk; glucokinase [EC:2.7.1.2]" }, { "name":"SOIL9_83660 glucokinase xylose repressor : Transcriptional regulator\/sugar kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6144 PE=4 SV=1: ROK\tK25026 glk; glucokinase [EC:2.7.1.2]" }, { "name":"SOIL9_54790 glucose-6-phosphate isomerase : Glucose-6-phosphate isomerase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_3532 PE=3 SV=1: PGI\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]" }, { "name":"SOIL9_63350 glucose-6-phosphate isomerase : Glucose-6-phosphate isomerase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=pgi PE=3 SV=1: PGI\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]" }, { "name":"SOIL9_58960 carbohydrate family : Kinase, PfkB family OS=Porphyromonas sp. oral taxon 278 str. W7784 GN=HMPREF1556_00125 PE=4 SV=1: PfkB\tK00847 E2.7.1.4; fructokinase [EC:2.7.1.4]" } ] }, { "name":"00620 Pyruvate metabolism [PATH:gms00620]", "children":[ { "name":"SOIL9_38680 acetyl-coenzyme a synthetase : Acetyl-coenzyme A synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=acsA PE=3 SV=1: AMP-binding: AMP-binding_C\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]" }, { "name":"SOIL9_65220 2-oxoglutarate ferredoxin oxidoreductase subunit alpha : 2-oxoglutarate ferredoxin oxidoreductase alpha subunit OS=Planctomyces maris DSM 8797 GN=PM8797T_13373 PE=4 SV=1: POR: POR_N\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SOIL9_65210 2-oxoglutarate ferredoxin oxidoreductase subunit beta : 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate\/2-ketoisovalerate family OS=Chloracidobacterium thermophilum (strain B) GN=Cabther_B0326 PE=4 SV=1: TPP_enzyme_C\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SOIL9_31720 pyruvate dehydrogenase : Pyruvate dehydrogenase E1 component OS=Rhodopirellula europaea SH398 GN=RESH_06116 PE=4 SV=1: Transketolase_N: Transketolase_N\tK00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]" }, { "name":"SOIL9_31700 dihydrolipoamide acetyltransferase : Pyruvate dehydrogenase E2 component OS=Melioribacter roseus (strain JCM 17771 \/ P3M-2) GN=MROS_0858 PE=3 SV=1: Biotin_lipoyl: Biotin_lipoyl: E3_binding: 2-oxoacid_dh\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"SOIL9_79590 branched-chain alpha-keto acid dehydrogenase subunit e2 : Catalytic domain of components of various dehydrogenase complexes OS=Sulfolobus islandicus (strain Y.N.15.51 \/ Yellowstone #2) GN=YN1551_2054 PE=4 SV=1: Biotin_lipoyl: E3_binding: 2-oxoacid_dh\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"SOIL9_55200 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4534 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_74420 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6538 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_38310 acetoin dehydrogenase : Alcohol dehydrogenase superfamily, zinc-containing OS=Rhodopseudomonas palustris (strain HaA2) GN=RPB_3806 PE=3 SV=1: ADH_N: ADH_zinc_N\tK00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase \/ alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]" }, { "name":"SOIL9_73480 alcohol dehydrogenase : Zinc-containing alcohol dehydrogenase superfamily protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_08987 PE=3 SV=1: ADH_N: ADH_zinc_N\tK12957 ahr; alcohol\/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]" }, { "name":"SOIL9_45700 zinc-binding dehydrogenase family protein : Alcohol dehydrogenase OS=Opitutaceae bacterium TAV5 GN=OPIT5_29055 PE=3 SV=1: ADH_N: ADH_zinc_N\tK13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]" }, { "name":"SOIL9_07550 acetate kinase : Acetate kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ackA PE=3 SV=1: Acetate_kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]" }, { "name":"SOIL9_58040 pyruvate kinase : Pyruvate kinase OS=Hyalangium minutum GN=DB31_5931 PE=3 SV=1: PK: PK_C\tK00873 PK; pyruvate kinase [EC:2.7.1.40]" }, { "name":"SOIL9_27590 acetyl-carboxylase subunit alpha : Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=accA PE=3 SV=1: ACCA\tK01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]" }, { "name":"SOIL9_72090 acetyl-carboxylase biotin carboxyl carrier protein : Biotin carboxyl carrier protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2167 PE=4 SV=1: Biotin_lipoyl\tK02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein" }, { "name":"SOIL9_72100 acetyl-carboxylase subunit alpha : Acetyl-CoA carboxylase, biotin carboxylase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0063 PE=4 SV=1: CPSase_L_chain: CPSase_L_D2: Biotin_carb_C\tK01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]" }, { "name":"SOIL9_11600 acetyl-carboxyl beta subunit : Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=accD PE=3 SV=1: Carboxyl_trans\tK01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]" }, { "name":"SOIL9_31390 acylphosphatase : Acylphosphatase OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_1202 PE=3 SV=1: Acylphosphatase\tK01512 acyP; acylphosphatase [EC:3.6.1.7]" }, { "name":"SOIL9_59540 betaine-aldehyde dehydrogenase : Aldehyde dehydrogenase (Acceptor) OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_2599 PE=3 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_82990 aldehyde dehydrogenase : Aldehyde dehydrogenase OS=uncultured planctomycete GN=HGMM_F16E03C18 PE=4 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_08790 l-lactate dehydrogenase : L-lactate dehydrogenase OS=Caldilinea aerophila (strain DSM 14535 \/ JCM 11387 \/ NBRC 104270 \/ STL-6-O1) GN=ldh PE=3 SV=1: Ldh_1_N: Ldh_1_C\tK00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]" }, { "name":"SOIL9_01010 Zn-dependent hydrolase, glyoxylase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6729 PE=4 SV=1: Lactamase_B\tK01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]" }, { "name":"SOIL9_83550 unnamed protein product; BLAST_uniprot: no_hits\tK01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]" }, { "name":"SOIL9_27740 pyruvate carboxylase : Pyruvate carboxylase OS=Blastopirellula marina DSM 3645 GN=DSM3645_29761 PE=4 SV=1: CPSase_L_chain: CPSase_L_D2: Biotin_carb_C: HMGL-like: PYC_OADA: Biotin_lipoyl\tK01958 PC; pyruvate carboxylase [EC:6.4.1.1]" }, { "name":"SOIL9_11650 malate dehydrogenase : Malate dehydrogenase OS=Leptospira borgpetersenii str. UI 09149 GN=mdh PE=3 SV=1: Ldh_1_N: Ldh_1_C\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]" }, { "name":"SOIL9_04060 fumarate hydratase : Fumarate hydratase class II OS=Chroococcidiopsis thermalis PCC 7203 GN=fumC PE=3 SV=1: Lyase_1: FumaraseC_C\tK01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]" }, { "name":"SOIL9_05870 phosphoenolpyruvate carboxykinase : Phosphoenolpyruvate carboxykinase [GTP] OS=Granulicella mallensis (strain ATCC BAA-1857 \/ DSM 23137 \/ MP5ACTX8) GN=pckG PE=3 SV=1: PEPCK\tK01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]" }, { "name":"SOIL9_53970 pyruvate phosphate dikinase : Pyruvate, phosphate dikinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6461 PE=4 SV=1: PPDK_N: PEP-utilizers: PEP-utilizers_C\tK01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]" }, { "name":"SOIL9_50660 acetyl-acetyltransferase : Acetyl-CoA acetyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6120 PE=3 SV=1: Thiolase_N: Thiolase_C\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SOIL9_12020 2-isopropylmalate synthase : 2-isopropylmalate synthase\/homocitrate synthase family protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2070 PE=3 SV=1: HMGL-like: LeuA_dimer\tK01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]" }, { "name":"SOIL9_33480 2-isopropylmalate synthase : 2-isopropylmalate synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=leuA PE=3 SV=1: HMGL-like: LeuA_dimer\tK01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]" }, { "name":"SOIL9_10920 l-lactate dehydrogenase : L-lactate dehydrogenase (Cytochrome) OS=Runella slithyformis (strain ATCC 29530 \/ DSM 19594 \/ LMG 11500 \/ NCIMB 11436 \/ LSU 4) GN=Runsl_3317 PE=4 SV=1: FMN_dh" } ] }, { "name":"00630 Glyoxylate and dicarboxylate metabolism [PATH:gms00630]", "children":[ { "name":"SOIL9_11650 malate dehydrogenase : Malate dehydrogenase OS=Leptospira borgpetersenii str. UI 09149 GN=mdh PE=3 SV=1: Ldh_1_N: Ldh_1_C\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]" }, { "name":"SOIL9_31440 citrate synthase : Citrate synthase OS=Nodularia spumigena CCY9414 GN=N9414_08180 PE=3 SV=1: Citrate_synt\tK01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]" }, { "name":"SOIL9_51270 citrate synthase : Citrate synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5364 PE=3 SV=1: Citrate_synt\tK01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]" }, { "name":"SOIL9_46590 aconitate hydratase : Aconitate hydratase OS=Candidatus Competibacter denitrificans Run_A_D11 GN=acnA PE=3 SV=1: Aconitase: Aconitase: Aconitase_C\tK27802 acnA; aconitate hydratase A \/ 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]" }, { "name":"SOIL9_38680 acetyl-coenzyme a synthetase : Acetyl-coenzyme A synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=acsA PE=3 SV=1: AMP-binding: AMP-binding_C\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]" }, { "name":"SOIL9_50660 acetyl-acetyltransferase : Acetyl-CoA acetyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6120 PE=3 SV=1: Thiolase_N: Thiolase_C\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SOIL9_19400 dehydratase : Acyl dehydratase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1850 PE=4 SV=1: MaoC_dehydratas\tK17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]" }, { "name":"SOIL9_63990 Acyl dehydratase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1850 PE=4 SV=1: MaoC_dehydratas\tK17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]" }, { "name":"SOIL9_31140 glycolate oxidase subunit : FAD linked oxidase domain protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2649 PE=4 SV=1: FAD_binding_4: FAD-oxidase_C\tK00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]" }, { "name":"SOIL9_31120 fad linked oxidase domain-containing protein : FAD\/FMN-dependent dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1446 PE=4 SV=1: FAD_binding_4: FAD-oxidase_C\tK11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]" }, { "name":"SOIL9_31110 glycolate oxidase : Fe-S oxidoreductase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1445 PE=4 SV=1: Fer4_17: CCG: CCG\tK11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]" }, { "name":"SOIL9_10180 catalase : Catalase-related peroxidase OS=Acidobacterium capsulatum (strain ATCC 51196 \/ DSM 11244 \/ JCM 7670) GN=ACP_1705 PE=3 SV=1: Catalase\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"SOIL9_10580 catalase : Catalase KatB OS=Corallococcus coralloides (strain ATCC 25202 \/ DSM 2259 \/ NBRC 100086 \/ M2) GN=katB PE=4 SV=1: Catalase: Catalase-rel\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"SOIL9_48460 catalase : Catalase OS=Rhodomicrobium vannielii (strain ATCC 17100 \/ ATH 3.1.1 \/ DSM 162 \/ LMG 4299) GN=Rvan_0122 PE=3 SV=1: Catalase: Catalase-rel\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"SOIL9_81230 catalase : Catalase OS=Rhodomicrobium vannielii (strain ATCC 17100 \/ ATH 3.1.1 \/ DSM 162 \/ LMG 4299) GN=Rvan_0122 PE=3 SV=1: Catalase: Catalase-rel\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"SOIL9_72850 glyoxylate reductase : Glyoxylate reductase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4687 PE=3 SV=1: 2-Hacid_dh: 2-Hacid_dh_C\tK00015 gyaR; glyoxylate reductase [EC:1.1.1.26]" }, { "name":"SOIL9_65650 carotenoid oxygenase : HAD-superfamily hydrolase, subfamily IA, variant 1 OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3364 PE=4 SV=1: HAD_2\tK01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]" }, { "name":"SOIL9_42310 alanine--glyoxylate aminotransferase : Aminotransferase, class V OS=Planctomyces maris DSM 8797 GN=PM8797T_18841 PE=3 SV=1: Aminotran_5\tK00830 AGXT; alanine-glyoxylate transaminase \/ serine-glyoxylate transaminase \/ serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]" }, { "name":"SOIL9_65050 family transcriptional regulator : Transcriptional regulator with HTH domain and aminotransferase domain OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2242 PE=4 SV=1: Aminotran_1_2\tK05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]" }, { "name":"SOIL9_14000 glutamate synthase : Glutamate synthase (Ferredoxin) OS=Truepera radiovictrix (strain DSM 17093 \/ CIP 108686 \/ LMG 22925 \/ RQ-24) GN=Trad_0209 PE=4 SV=1: GATase_2: Glu_syn_central: Glu_synthase: GXGXG\tK00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]" }, { "name":"SOIL9_28990 glutamate synthase : Glutamate synthase (NADH) large subunit OS=Chthonomonas calidirosea (strain DSM 23976 \/ ICMP 18418 \/ T49) GN=CCALI_01654 PE=4 SV=1: GATase_2: Glu_syn_central: Glu_synthase: GXGXG\tK00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]" }, { "name":"SOIL9_63500 glutamine synthetase : Glutamine synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4895 PE=3 SV=1: GSIII_N: Gln-synt_C\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"SOIL9_75110 glutamine synthetase : Glutamine synthetase OS=Blastopirellula marina DSM 3645 GN=DSM3645_13233 PE=3 SV=1: Gln-synt_N: Gln-synt_C\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"SOIL9_10300 serine hydroxymethyltransferase : Serine hydroxymethyltransferase OS=Blastopirellula marina DSM 3645 GN=glyA PE=3 SV=1: SHMT\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" }, { "name":"SOIL9_53380 glycine dehydrogenase subunit 1 : Probable glycine dehydrogenase (decarboxylating) subunit 1 OS=Blastopirellula marina DSM 3645 GN=gcvPA PE=3 SV=1: GDC-P\tK00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]" }, { "name":"SOIL9_53360 glycine dehydrogenase subunit 2 : Probable glycine dehydrogenase (decarboxylating) subunit 2 OS=uncultured planctomycete GN=gcvPB PE=3 SV=1: GDC-P\tK00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]" }, { "name":"SOIL9_53400 glycine cleavage system t protein : Aminomethyltransferase OS=Planctomyces maris DSM 8797 GN=gcvT PE=3 SV=1: GCV_T: GCV_T_C\tK00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]" }, { "name":"SOIL9_55200 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4534 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_74420 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6538 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_29290 Glycine cleavage H-protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4504 PE=4 SV=1: GCV_H\tK02437 gcvH; glycine cleavage system H protein" }, { "name":"SOIL9_53390 glycine cleavage system protein h : Glycine cleavage system H protein OS=Planctomyces maris DSM 8797 GN=gcvH PE=3 SV=1: GCV_H\tK02437 gcvH; glycine cleavage system H protein" }, { "name":"SOIL9_67540 Hydroxypyruvate isomerase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2183 PE=4 SV=1: AP_endonuc_2\tK01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]" }, { "name":"SOIL9_18080 glycerate kinase : Putative uncharacterized protein OS=uncultured Desulfobacterium sp. GN=N47_E46250 PE=4 SV=1: DUF4147: MOFRL\tK11529 gck; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"SOIL9_69980 tartrate dehydrogenase : 3-isopropylmalate dehydrogenase OS=Solibacter usitatus (strain Ellin6076) GN=Acid_1530 PE=3 SV=1: Iso_dh\tK07246 ttuC; tartrate dehydrogenase\/decarboxylase \/ D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]" }, { "name":"SOIL9_10130 2-dehydro-3-deoxyphosphogluconate aldolase : Entner-Doudoroff aldolase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1080 PE=4 SV=1: Aldolase\tK01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase \/ (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]" }, { "name":"SOIL9_39150 oxalate decarboxylase : Bicupin, oxalate decarboxylase family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7471 PE=4 SV=1: Cupin_2: Cupin_1\tK01569 oxdD; oxalate decarboxylase [EC:4.1.1.2]" }, { "name":"SOIL9_54220 nadh dehydrogenase : Respiratory-chain NADH dehydrogenase domain 51 kDa subunit OS=Rhodopirellula sallentina SM41 GN=RSSM_02690 PE=4 SV=1: 2Fe-2S_thioredx: Complex1_51K: SLBB: NADH_4Fe-4S\tK22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9]" }, { "name":"SOIL9_30760 formyltetrahydrofolate deformylase : Formyltetrahydrofolate deformylase OS=Nitrolancea hollandica Lb GN=purU PE=4 SV=1: ACT: Formyl_trans_N\tK01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]" } ] }, { "name":"00640 Propanoate metabolism [PATH:gms00640]", "children":[ { "name":"SOIL9_38680 acetyl-coenzyme a synthetase : Acetyl-coenzyme A synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=acsA PE=3 SV=1: AMP-binding: AMP-binding_C\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]" }, { "name":"SOIL9_07550 acetate kinase : Acetate kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ackA PE=3 SV=1: Acetate_kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]" }, { "name":"SOIL9_79190 3-methyl-2-oxobutanoate dehydrogenase : Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1: E1_dh\tK00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]" }, { "name":"SOIL9_79200 3-methyl-2-oxobutanoate dehydrogenase : Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1: Transket_pyr: Transketolase_C\tK00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]" }, { "name":"SOIL9_79580 dehydrogenase e1 component : 2-oxoisovalerate dehydrogenase E1 OS=Mesorhizobium sp. LSJC280B00 GN=X772_08145 PE=4 SV=1: E1_dh: Transket_pyr: Transketolase_C\tK11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]" }, { "name":"SOIL9_79210 branched-chain alpha-keto acid dehydrogenase subunit e2 : Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1: Biotin_lipoyl: E3_binding: 2-oxoacid_dh\tK09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]" }, { "name":"SOIL9_55200 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4534 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_74420 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6538 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_27590 acetyl-carboxylase subunit alpha : Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=accA PE=3 SV=1: ACCA\tK01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]" }, { "name":"SOIL9_72090 acetyl-carboxylase biotin carboxyl carrier protein : Biotin carboxyl carrier protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2167 PE=4 SV=1: Biotin_lipoyl\tK02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein" }, { "name":"SOIL9_72100 acetyl-carboxylase subunit alpha : Acetyl-CoA carboxylase, biotin carboxylase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0063 PE=4 SV=1: CPSase_L_chain: CPSase_L_D2: Biotin_carb_C\tK01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]" }, { "name":"SOIL9_11600 acetyl-carboxyl beta subunit : Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=accD PE=3 SV=1: Carboxyl_trans\tK01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]" }, { "name":"SOIL9_82970 4-aminobutyrate aminotransferase : Acetylornithine aminotransferase OS=uncultured planctomycete GN=argD PE=3 SV=1: Aminotran_3\tK00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]" }, { "name":"SOIL9_27560 4-aminobutyrate aminotransferase : 4-aminobutyrate aminotransferase OS=Planctomyces maris DSM 8797 GN=PM8797T_18644 PE=3 SV=1: Aminotran_3\tK07250 gabT; 4-aminobutyrate aminotransferase \/ (S)-3-amino-2-methylpropionate transaminase \/ 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]" }, { "name":"SOIL9_67470 succinyl-synthetase subunit beta : Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=sucC PE=3 SV=1: ATP-grasp_2: Ligase_CoA\tK01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]" }, { "name":"SOIL9_67440 succinyl-synthetase subunit alpha : Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Cystobacter fuscus DSM 2262 GN=D187_007618 PE=3 SV=1: CoA_binding: Ligase_CoA\tK01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]" }, { "name":"SOIL9_31440 citrate synthase : Citrate synthase OS=Nodularia spumigena CCY9414 GN=N9414_08180 PE=3 SV=1: Citrate_synt\tK01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]" }, { "name":"SOIL9_51270 citrate synthase : Citrate synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5364 PE=3 SV=1: Citrate_synt\tK01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]" }, { "name":"SOIL9_19840 2-methylcitrate dehydratase : Uncharacterized protein involved in propionate catabolism OS=Chthonomonas calidirosea (strain DSM 23976 \/ ICMP 18418 \/ T49) GN=CCALI_01700 PE=4 SV=1: MmgE_PrpD\tK01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]" }, { "name":"SOIL9_46590 aconitate hydratase : Aconitate hydratase OS=Candidatus Competibacter denitrificans Run_A_D11 GN=acnA PE=3 SV=1: Aconitase: Aconitase: Aconitase_C\tK27802 acnA; aconitate hydratase A \/ 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]" }, { "name":"SOIL9_08410 methylisocitrate lyase : Methylisocitrate lyase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2255 PE=3 SV=1: PEP_mutase\tK03417 prpB; methylisocitrate lyase [EC:4.1.3.30]" }, { "name":"SOIL9_08790 l-lactate dehydrogenase : L-lactate dehydrogenase OS=Caldilinea aerophila (strain DSM 14535 \/ JCM 11387 \/ NBRC 104270 \/ STL-6-O1) GN=ldh PE=3 SV=1: Ldh_1_N: Ldh_1_C\tK00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]" } ] }, { "name":"00650 Butanoate metabolism [PATH:gms00650]", "children":[ { "name":"SOIL9_50660 acetyl-acetyltransferase : Acetyl-CoA acetyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6120 PE=3 SV=1: Thiolase_N: Thiolase_C\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SOIL9_72880 fatty oxidation alpha subunit : Multifunctional fatty acid oxidation complex subunit alpha (Fragment) OS=Escherichia coli ECA-0157 GN=fadJ PE=4 SV=1: ECH\tK01715 crt; short-chain-enoyl-CoA hydratase [EC:4.2.1.150]" }, { "name":"SOIL9_19400 dehydratase : Acyl dehydratase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1850 PE=4 SV=1: MaoC_dehydratas\tK17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]" }, { "name":"SOIL9_63990 Acyl dehydratase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1850 PE=4 SV=1: MaoC_dehydratas\tK17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]" }, { "name":"SOIL9_79780 acyl :acetate 3-ketoacid alpha subunit : AtoD: acyl CoA:acetate\/3-ketoacid CoA transferase, alpha subunit OS=Desulfobacula toluolica (strain DSM 7467 \/ Tol2) GN=atoD PE=4 SV=1: CoA_trans\tK01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]" }, { "name":"SOIL9_71090 3-oxoacid -transferase : 3-oxoacid CoA-transferase OS=Smithella sp. SCADC GN=ER57_16605 PE=4 SV=1: CoA_trans\tK01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]" }, { "name":"SOIL9_69980 tartrate dehydrogenase : 3-isopropylmalate dehydrogenase OS=Solibacter usitatus (strain Ellin6076) GN=Acid_1530 PE=3 SV=1: Iso_dh\tK07246 ttuC; tartrate dehydrogenase\/decarboxylase \/ D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]" }, { "name":"SOIL9_13680 succinate dehydrogenase : Succinate dehydrogenase subunit A OS=Koribacter versatilis (strain Ellin345) GN=Acid345_1384 PE=4 SV=1: FAD_binding_2: Succ_DH_flav_C\tK00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]" }, { "name":"SOIL9_14190 succinate dehydrogenase or fumarate flavoprotein subunit : Succinate dehydrogenase or fumarate reductase, flavoprotein subunit OS=Leptospira kirschneri serovar Bim str. 1051 GN=sdhA PE=4 SV=1: FAD_binding_2: Succ_DH_flav_C\tK00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]" }, { "name":"SOIL9_13670 fumarate reductase : Fumarate reductase OS=uncultured bacterium lac160 PE=4 SV=1: Fer2_3: Fer4_8\tK00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]" }, { "name":"SOIL9_47000 succinate dehydrogenase : Succinate dehydrogenase and fumarate reductase iron-sulfur protein OS=Leptospira meyeri serovar Semaranga str. Veldrot Semarang 173 GN=LEP1GSC196_3454 PE=4 SV=1: Fer2_3: Fer4_8\tK00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]" }, { "name":"SOIL9_14180 Succinate dehydrogenase cytochrome B subunit, b558 family OS=Leptospira sp. B5-022 GN=sdhC PE=4 SV=1\tK00241 sdhC; succinate dehydrogenase cytochrome b subunit" }, { "name":"SOIL9_82970 4-aminobutyrate aminotransferase : Acetylornithine aminotransferase OS=uncultured planctomycete GN=argD PE=3 SV=1: Aminotran_3\tK00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]" }, { "name":"SOIL9_27560 4-aminobutyrate aminotransferase : 4-aminobutyrate aminotransferase OS=Planctomyces maris DSM 8797 GN=PM8797T_18644 PE=3 SV=1: Aminotran_3\tK07250 gabT; 4-aminobutyrate aminotransferase \/ (S)-3-amino-2-methylpropionate transaminase \/ 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]" }, { "name":"SOIL9_29450 succinate-semialdehyde dehydrogenase : NAD-dependent aldehyde dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1922 PE=3 SV=1: Aldedh\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"SOIL9_65220 2-oxoglutarate ferredoxin oxidoreductase subunit alpha : 2-oxoglutarate ferredoxin oxidoreductase alpha subunit OS=Planctomyces maris DSM 8797 GN=PM8797T_13373 PE=4 SV=1: POR: POR_N\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SOIL9_65210 2-oxoglutarate ferredoxin oxidoreductase subunit beta : 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate\/2-ketoisovalerate family OS=Chloracidobacterium thermophilum (strain B) GN=Cabther_B0326 PE=4 SV=1: TPP_enzyme_C\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SOIL9_38330 acetolactate synthase : Uncharacterized protein OS=uncultured bacterium GN=ACD_32C00113G0025 PE=3 SV=1: TPP_enzyme_N: TPP_enzyme_M: TPP_enzyme_C\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SOIL9_62530 acetolactate synthase : Acetolactate synthase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0933 PE=3 SV=1: TPP_enzyme_N: TPP_enzyme_M: TPP_enzyme_C\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SOIL9_82560 thiamine pyrophosphate n-terminal tpp binding domain protein : Thiamine pyrophosphate central domain-containing protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2596 PE=3 SV=1: TPP_enzyme_N: TPP_enzyme_M: TPP_enzyme_C\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SOIL9_82260 acetolactate synthase small subunit : Acetolactate synthase, small subunit OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4688 PE=4 SV=1: ACT: ALS_ss_C\tK01653 E2.2.1.6S; acetolactate synthase I\/III small subunit [EC:2.2.1.6]" } ] }, { "name":"00660 C5-Branched dibasic acid metabolism [PATH:gms00660]", "children":[ { "name":"SOIL9_38330 acetolactate synthase : Uncharacterized protein OS=uncultured bacterium GN=ACD_32C00113G0025 PE=3 SV=1: TPP_enzyme_N: TPP_enzyme_M: TPP_enzyme_C\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SOIL9_62530 acetolactate synthase : Acetolactate synthase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0933 PE=3 SV=1: TPP_enzyme_N: TPP_enzyme_M: TPP_enzyme_C\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SOIL9_82560 thiamine pyrophosphate n-terminal tpp binding domain protein : Thiamine pyrophosphate central domain-containing protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2596 PE=3 SV=1: TPP_enzyme_N: TPP_enzyme_M: TPP_enzyme_C\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SOIL9_82260 acetolactate synthase small subunit : Acetolactate synthase, small subunit OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4688 PE=4 SV=1: ACT: ALS_ss_C\tK01653 E2.2.1.6S; acetolactate synthase I\/III small subunit [EC:2.2.1.6]" }, { "name":"SOIL9_67470 succinyl-synthetase subunit beta : Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=sucC PE=3 SV=1: ATP-grasp_2: Ligase_CoA\tK01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]" }, { "name":"SOIL9_67440 succinyl-synthetase subunit alpha : Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Cystobacter fuscus DSM 2262 GN=D187_007618 PE=3 SV=1: CoA_binding: Ligase_CoA\tK01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]" }, { "name":"SOIL9_82220 homoaconitate hydratase family protein : 3-isopropylmalate dehydratase OS=Nitrospina gracilis (strain 3\/211) GN=IIL PE=4 SV=1: Aconitase: Aconitase\tK01703 leuC; 3-isopropylmalate\/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]" }, { "name":"SOIL9_71840 3-isopropylmalate dehydratase small subunit : 3-isopropylmalate\/(R)-2-methylmalate dehydratase small subunit OS=uncultured planctomycete GN=HGMM_F12C05C17 PE=4 SV=1: Aconitase_C\tK01704 leuD; 3-isopropylmalate\/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]" } ] }, { "name":"00562 Inositol phosphate metabolism [PATH:gms00562]", "children":[ { "name":"SOIL9_66500 inositol-1-monophosphatase : Inositol monophosphatase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4686 PE=4 SV=1: Inositol_P\tK01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]" }, { "name":"SOIL9_73820 3-phytase : 3-phytase (Myo-inositol-hexaphosphate 3-phosphohydrolase) OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3868 PE=4 SV=1: Phytase\tK01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]" }, { "name":"SOIL9_06780 myo-inositol-1-phosphate synthase : Myo-inositol-1-phosphate synthase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3018 PE=4 SV=1: NAD_binding_5: Inos-1-P_synth\tK01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]" }, { "name":"SOIL9_59720 triosephosphate isomerase : Triosephosphate isomerase OS=Pelotomaculum thermopropionicum (strain DSM 13744 \/ JCM 10971 \/ SI) GN=TpiA PE=3 SV=1: TIM\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]" } ] }, { "name":"00566 Sulfoquinovose metabolism", "children":[ { "name":"SOIL9_11650 malate dehydrogenase : Malate dehydrogenase OS=Leptospira borgpetersenii str. UI 09149 GN=mdh PE=3 SV=1: Ldh_1_N: Ldh_1_C\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]" } ] } ] }, { "name":"09102 Energy metabolism", "children":[ { "name":"00190 Oxidative phosphorylation [PATH:gms00190]", "children":[ { "name":"SOIL9_33180 nadh-ubiquinone plastoquinone oxidoreductase chain 3 : NADH-quinone oxidoreductase subunit OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3856 PE=3 SV=1: Oxidored_q4\tK00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]" }, { "name":"SOIL9_63170 nadh dehydrogenase : NADH-quinone oxidoreductase subunit A OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=nuoA PE=3 SV=1: Oxidored_q4\tK00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]" }, { "name":"SOIL9_33170 nadh-quinone oxidoreductase subunit b : NADH-quinone oxidoreductase subunit B OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=nuoB PE=3 SV=1: Oxidored_q6\tK00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]" }, { "name":"SOIL9_63180 nadh-quinone b subunit : NADH-quinone oxidoreductase subunit B OS=uncultured planctomycete GN=nuoB PE=3 SV=1: Oxidored_q6\tK00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]" }, { "name":"SOIL9_33160 nadh dehydrogenase subunit c : NADH-quinone oxidoreductase subunit C OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=nuoC PE=3 SV=1: Complex1_30kDa\tK00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]" }, { "name":"SOIL9_63190 nadh dehydrogenase : NADH-quinone oxidoreductase subunit C OS=uncultured planctomycete GN=nuoC PE=3 SV=1: Complex1_30kDa\tK00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]" }, { "name":"SOIL9_33150 nadh dehydrogenase subunit d : NADH-quinone oxidoreductase subunit D OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=nuoD PE=3 SV=1: Complex1_49kDa\tK00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]" }, { "name":"SOIL9_63220 nadh dehydrogenase subunit d : NADH-quinone oxidoreductase subunit D OS=uncultured planctomycete GN=nuoD PE=3 SV=1: Complex1_49kDa\tK00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]" }, { "name":"SOIL9_33140 nadh dehydrogenase : NADH dehydrogenase (Ubiquinone) 24 kDa subunit OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3860 PE=4 SV=1: 2Fe-2S_thioredx\tK00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]" }, { "name":"SOIL9_33130 nadh dehydrogenase subunit f : NADH-quinone oxidoreductase, F subunit OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3862 PE=4 SV=1: Complex1_51K: SLBB: NADH_4Fe-4S\tK00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]" }, { "name":"SOIL9_33110 nadh dehydrogenase : Ferredoxin OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3863 PE=4 SV=1: Fer2_4: NADH-G_4Fe-4S_3: Molybdopterin\tK00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]" }, { "name":"SOIL9_18320 nadh dehydrogenase : NADH-quinone oxidoreductase subunit H OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=nuoH PE=3 SV=1: NADHdh\tK00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]" }, { "name":"SOIL9_33100 nadh dehydrogenase : NADH-quinone oxidoreductase subunit H OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=nuoH PE=3 SV=1: NADHdh: NADHdh\tK00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]" }, { "name":"SOIL9_33090 nadh-quinone oxidoreductase subunit i : NADH-quinone oxidoreductase subunit I OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=nuoI PE=3 SV=1: Fer4\tK00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]" }, { "name":"SOIL9_63160 nadh dehydrogenase subunit i : 4Fe-4S ferredoxin iron-sulfur binding domain protein OS=uncultured planctomycete GN=HGMM_F16E03C26 PE=4 SV=1: Fer4_7\tK00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]" }, { "name":"SOIL9_18290 nadh-ubiquinone plastoquinone oxidoreductase chain 6 : NADH-ubiquinone\/plastoquinone oxidoreductase chain 6 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0267 PE=3 SV=1: Oxidored_q3\tK00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]" }, { "name":"SOIL9_18280 nadh-ubiquinone oxidoreductase chain 4l : NADH-quinone oxidoreductase subunit K OS=Blastopirellula marina DSM 3645 GN=nuoK PE=3 SV=1: Oxidored_q2\tK00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]" }, { "name":"SOIL9_33070 nadh-quinone oxidoreductase subunit k : NADH-quinone oxidoreductase subunit K OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=nuoK PE=3 SV=1: Oxidored_q2\tK00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]" }, { "name":"SOIL9_18270 proton-translocating nadh-quinone oxidoreductase subunit l : NADH dehydrogenase subunit L OS=Blastopirellula marina DSM 3645 GN=DSM3645_08542 PE=4 SV=1: Oxidored_q1_N: Oxidored_q1: Oxidored_q1\tK00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]" }, { "name":"SOIL9_19630 nadh dehydrogenase : NADH dehydrogenase (Quinone) OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3078 PE=4 SV=1: Oxidored_q1_N: Oxidored_q1\tK00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]" }, { "name":"SOIL9_33060 nadh dehydrogenase subunit l : Proton-translocating NADH-quinone oxidoreductase, chain L OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3868 PE=4 SV=1: Oxidored_q1_N: Oxidored_q1: Oxidored_q1_C\tK00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]" }, { "name":"SOIL9_18260 proton-translocating nadh-quinone oxidoreductase subunit m : Proton-translocating NADH-quinone oxidoreductase, chain M OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1360 PE=4 SV=1: Oxidored_q5_N: Oxidored_q1: Oxidored_q1\tK00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]" }, { "name":"SOIL9_19620 NADH:ubiquinone oxidoreductase subunit 4 (Chain M) OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5057 PE=4 SV=1: Oxidored_q1\tK00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]" }, { "name":"SOIL9_33050 proton-translocating nadh-quinone oxidoreductase subunit m : Proton-translocating NADH-quinone oxidoreductase, chain M OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3869 PE=4 SV=1: Oxidored_q1\tK00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]" }, { "name":"SOIL9_02800 nadh-quinone oxidoreductase subunit n : NADH-quinone oxidoreductase subunit N OS=uncultured planctomycete GN=nuoN PE=3 SV=1: Oxidored_q1\tK00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]" }, { "name":"SOIL9_33040 nadh-quinone oxidoreductase subunit n : NADH-quinone oxidoreductase subunit N OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=nuoN PE=3 SV=1: Oxidored_q1\tK00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]" }, { "name":"SOIL9_54030 fad-dependent pyridine nucleotide-disulfide oxidoreductase : FAD-dependent pyridine nucleotide-disulphide oxidoreductase OS=Solibacter usitatus (strain Ellin6076) GN=Acid_3971 PE=4 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox\tK03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]" }, { "name":"SOIL9_13680 succinate dehydrogenase : Succinate dehydrogenase subunit A OS=Koribacter versatilis (strain Ellin345) GN=Acid345_1384 PE=4 SV=1: FAD_binding_2: Succ_DH_flav_C\tK00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]" }, { "name":"SOIL9_14190 succinate dehydrogenase or fumarate flavoprotein subunit : Succinate dehydrogenase or fumarate reductase, flavoprotein subunit OS=Leptospira kirschneri serovar Bim str. 1051 GN=sdhA PE=4 SV=1: FAD_binding_2: Succ_DH_flav_C\tK00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]" }, { "name":"SOIL9_13670 fumarate reductase : Fumarate reductase OS=uncultured bacterium lac160 PE=4 SV=1: Fer2_3: Fer4_8\tK00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]" }, { "name":"SOIL9_47000 succinate dehydrogenase : Succinate dehydrogenase and fumarate reductase iron-sulfur protein OS=Leptospira meyeri serovar Semaranga str. Veldrot Semarang 173 GN=LEP1GSC196_3454 PE=4 SV=1: Fer2_3: Fer4_8\tK00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]" }, { "name":"SOIL9_14180 Succinate dehydrogenase cytochrome B subunit, b558 family OS=Leptospira sp. B5-022 GN=sdhC PE=4 SV=1\tK00241 sdhC; succinate dehydrogenase cytochrome b subunit" }, { "name":"SOIL9_53560 protoheme ix farnesyltransferase : Protoheme IX farnesyltransferase OS=Solibacter usitatus (strain Ellin6076) GN=ctaB PE=3 SV=1: UbiA\tK02257 COX10; heme o synthase [EC:2.5.1.141]" }, { "name":"SOIL9_53590 caa -type subunit iv : Caa(3)-type oxidase subunit IV OS=Marinobacter nanhaiticus D15-8W GN=J057_16645 PE=4 SV=1: COX4_pro\tK02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]" }, { "name":"SOIL9_53600 cytochrome c oxidase subunit iii : Cytochrome c oxidase subunit III OS=Rhodothermus marinus SG0.5JP17-172 GN=Rhom172_0214 PE=3 SV=1: COX3: COX3\tK02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]" }, { "name":"SOIL9_53610 cytochrome c oxidase subunit i : Cytochrome c oxidase, subunit I OS=Thermobaculum terrenum (strain ATCC BAA-798 \/ YNP1) GN=Tter_1587 PE=3 SV=1: COX1\tK02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]" }, { "name":"SOIL9_30500 cytochrome b561 : Marine sediment metagenome DNA, contig: S01H1_S22417 OS=marine sediment metagenome GN=S01H1_57056 PE=4 SV=1: Cytochrome_CBB3\tK02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]" }, { "name":"SOIL9_53620 cytochrome b561 : Cytochrome c oxidase, subunit II OS=Chloracidobacterium thermophilum (strain B) GN=Cabther_B0234 PE=4 SV=1: COX2: Cytochrom_C\tK02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]" }, { "name":"SOIL9_53570 Cytochrome oxidase assembly OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_2264 PE=4 SV=1: COX15-CtaA: COX15-CtaA\tK02259 COX15; heme a synthase [EC:1.17.99.9]" }, { "name":"SOIL9_65610 membrane protein : Cytochrome-c oxidase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0396 PE=4 SV=1: COX1\tK00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]" }, { "name":"SOIL9_65620 cytochrome c oxidase mono-heme subunit : Cytochrome C oxidase mono-heme subunit\/FixO OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0397 PE=4 SV=1: FixO\tK00405 ccoO; cytochrome c oxidase cbb3-type subunit II" }, { "name":"SOIL9_22960 atp synthase subunit alpha : ATP synthase subunit alpha OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=atpA PE=3 SV=1: ATP-synt_ab_N: ATP-synt_ab: ATP-synt_ab: ATP-synt_ab_C\tK02111 ATPF1A; F-type H+\/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]" }, { "name":"SOIL9_22920 f0f1 atp synthase subunit beta : ATP synthase subunit beta OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=atpD PE=3 SV=1: ATP-synt_ab_N: ATP-synt_ab: ATP-synt_ab_C\tK02112 ATPF1B; F-type H+\/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]" }, { "name":"SOIL9_22940 atp synthase gamma subunit : ATP synthase gamma chain OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=atpG PE=3 SV=1: ATP-synt\tK02115 ATPF1G; F-type H+-transporting ATPase subunit gamma" }, { "name":"SOIL9_22970 atp synthase subunit delta : ATP synthase subunit delta OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=atpH PE=3 SV=1: OSCP\tK02113 ATPF1D; F-type H+-transporting ATPase subunit delta" }, { "name":"SOIL9_22910 atp synthase epsilon subunit : ATP synthase epsilon chain OS=Rhodopirellula maiorica SM1 GN=atpC PE=3 SV=1: ATP-synt_DE_N\tK02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon" }, { "name":"SOIL9_23000 atp synthase subunit a : ATP synthase subunit a OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=atpB PE=3 SV=1: ATP-synt_A\tK02108 ATPF0A; F-type H+-transporting ATPase subunit a" }, { "name":"SOIL9_22980 atp synthase f0 subunit b : ATP synthase subunit b OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=atpF PE=3 SV=1: ATP-synt_B\tK02109 ATPF0B; F-type H+-transporting ATPase subunit b" }, { "name":"SOIL9_22990 atp synthase f0 c subunit : Putative ATP synthase C subunit OS=uncultured bacterium CBNPD1 BAC clone 543 PE=3 SV=1: ATP-synt_C\tK02110 ATPF0C; F-type H+-transporting ATPase subunit c" }, { "name":"SOIL9_10480 inorganic diphosphatase : Inorganic pyrophosphatase OS=Rhodopirellula baltica WH47 GN=ppa PE=3 SV=1: Pyrophosphatase\tK01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]" }, { "name":"SOIL9_58730 polyphosphate kinase : Polyphosphate kinase OS=Methylacidiphilum fumariolicum SolV GN=ppk PE=3 SV=1: PP_kinase_N: PP_kinase: PP_kinase_C\tK00937 ppk1; polyphosphate kinase [EC:2.7.4.1]" } ] }, { "name":"00195 Photosynthesis" }, { "name":"00196 Photosynthesis - antenna proteins" }, { "name":"00710 Carbon fixation by Calvin cycle [PATH:gms00710]", "children":[ { "name":"SOIL9_11610 phosphoglycerate kinase : Phosphoglycerate kinase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=pgk PE=3 SV=1: PGK\tK00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]" }, { "name":"SOIL9_11620 glyceraldehyde-3-phosphate dehydrogenase : Glyceraldehyde-3-phosphate dehydrogenase OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_1890 PE=3 SV=1: Gp_dh_N: Gp_dh_C\tK00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]" }, { "name":"SOIL9_74760 transketolase : Transketolase OS=Granulibacter bethesdensis CGDNIH3 GN=GbCGDNIH3_0856 PE=4 SV=1: Transketolase_N: Transket_pyr: Transketolase_C\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"SOIL9_03540 ribose 5-phosphate isomerase : Ribose-5-phosphate isomerase A OS=Candidatus Methylomirabilis oxyfera GN=rpiA PE=3 SV=1: Rib_5-P_isom_A\tK01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]" }, { "name":"SOIL9_62440 ribose 5-phosphate isomerase : Ribose-5-phosphate isomerase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_1998 PE=4 SV=1: LacAB_rpiB\tK01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]" }, { "name":"SOIL9_59720 triosephosphate isomerase : Triosephosphate isomerase OS=Pelotomaculum thermopropionicum (strain DSM 13744 \/ JCM 10971 \/ SI) GN=TpiA PE=3 SV=1: TIM\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]" }, { "name":"SOIL9_57690 ribulose-phosphate 3-epimerase : Ribulose-phosphate 3-epimerase OS=sediment metagenome GN=rpe PE=4 SV=1: Ribul_P_3_epim\tK01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]" }, { "name":"SOIL9_26710 transaldolase : Transaldolase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=tal PE=3 SV=1: Transaldolase\tK00616 TALDO1; transaldolase [EC:2.2.1.2]" }, { "name":"SOIL9_49880 transaldolase : Transaldolase OS=Sorangium cellulosum (strain So ce56) GN=sce3599 PE=3 SV=1: Transaldolase\tK00616 TALDO1; transaldolase [EC:2.2.1.2]" }, { "name":"SOIL9_53970 pyruvate phosphate dikinase : Pyruvate, phosphate dikinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6461 PE=4 SV=1: PPDK_N: PEP-utilizers: PEP-utilizers_C\tK01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]" }, { "name":"SOIL9_11650 malate dehydrogenase : Malate dehydrogenase OS=Leptospira borgpetersenii str. UI 09149 GN=mdh PE=3 SV=1: Ldh_1_N: Ldh_1_C\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]" } ] }, { "name":"00720 Other carbon fixation pathways [PATH:gms00720]", "children":[ { "name":"SOIL9_53970 pyruvate phosphate dikinase : Pyruvate, phosphate dikinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6461 PE=4 SV=1: PPDK_N: PEP-utilizers: PEP-utilizers_C\tK01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]" }, { "name":"SOIL9_27740 pyruvate carboxylase : Pyruvate carboxylase OS=Blastopirellula marina DSM 3645 GN=DSM3645_29761 PE=4 SV=1: CPSase_L_chain: CPSase_L_D2: Biotin_carb_C: HMGL-like: PYC_OADA: Biotin_lipoyl\tK01958 PC; pyruvate carboxylase [EC:6.4.1.1]" }, { "name":"SOIL9_11650 malate dehydrogenase : Malate dehydrogenase OS=Leptospira borgpetersenii str. UI 09149 GN=mdh PE=3 SV=1: Ldh_1_N: Ldh_1_C\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]" }, { "name":"SOIL9_04060 fumarate hydratase : Fumarate hydratase class II OS=Chroococcidiopsis thermalis PCC 7203 GN=fumC PE=3 SV=1: Lyase_1: FumaraseC_C\tK01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]" }, { "name":"SOIL9_13680 succinate dehydrogenase : Succinate dehydrogenase subunit A OS=Koribacter versatilis (strain Ellin345) GN=Acid345_1384 PE=4 SV=1: FAD_binding_2: Succ_DH_flav_C\tK00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]" }, { "name":"SOIL9_14190 succinate dehydrogenase or fumarate flavoprotein subunit : Succinate dehydrogenase or fumarate reductase, flavoprotein subunit OS=Leptospira kirschneri serovar Bim str. 1051 GN=sdhA PE=4 SV=1: FAD_binding_2: Succ_DH_flav_C\tK00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]" }, { "name":"SOIL9_13670 fumarate reductase : Fumarate reductase OS=uncultured bacterium lac160 PE=4 SV=1: Fer2_3: Fer4_8\tK00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]" }, { "name":"SOIL9_47000 succinate dehydrogenase : Succinate dehydrogenase and fumarate reductase iron-sulfur protein OS=Leptospira meyeri serovar Semaranga str. Veldrot Semarang 173 GN=LEP1GSC196_3454 PE=4 SV=1: Fer2_3: Fer4_8\tK00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]" }, { "name":"SOIL9_14180 Succinate dehydrogenase cytochrome B subunit, b558 family OS=Leptospira sp. B5-022 GN=sdhC PE=4 SV=1\tK00241 sdhC; succinate dehydrogenase cytochrome b subunit" }, { "name":"SOIL9_67440 succinyl-synthetase subunit alpha : Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Cystobacter fuscus DSM 2262 GN=D187_007618 PE=3 SV=1: CoA_binding: Ligase_CoA\tK01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]" }, { "name":"SOIL9_67470 succinyl-synthetase subunit beta : Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=sucC PE=3 SV=1: ATP-grasp_2: Ligase_CoA\tK01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]" }, { "name":"SOIL9_50660 acetyl-acetyltransferase : Acetyl-CoA acetyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6120 PE=3 SV=1: Thiolase_N: Thiolase_C\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SOIL9_65220 2-oxoglutarate ferredoxin oxidoreductase subunit alpha : 2-oxoglutarate ferredoxin oxidoreductase alpha subunit OS=Planctomyces maris DSM 8797 GN=PM8797T_13373 PE=4 SV=1: POR: POR_N\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SOIL9_65210 2-oxoglutarate ferredoxin oxidoreductase subunit beta : 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate\/2-ketoisovalerate family OS=Chloracidobacterium thermophilum (strain B) GN=Cabther_B0326 PE=4 SV=1: TPP_enzyme_C\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SOIL9_79450 isocitrate dehydrogenase : Isocitrate dehydrogenase [NADP] OS=Catenulispora acidiphila (strain DSM 44928 \/ NRRL B-24433 \/ NBRC 102108 \/ JCM 14897) GN=Caci_7976 PE=3 SV=1: Iso_dh\tK00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]" }, { "name":"SOIL9_46590 aconitate hydratase : Aconitate hydratase OS=Candidatus Competibacter denitrificans Run_A_D11 GN=acnA PE=3 SV=1: Aconitase: Aconitase: Aconitase_C\tK27802 acnA; aconitate hydratase A \/ 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]" }, { "name":"SOIL9_27590 acetyl-carboxylase subunit alpha : Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=accA PE=3 SV=1: ACCA\tK01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]" }, { "name":"SOIL9_72090 acetyl-carboxylase biotin carboxyl carrier protein : Biotin carboxyl carrier protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2167 PE=4 SV=1: Biotin_lipoyl\tK02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein" }, { "name":"SOIL9_72100 acetyl-carboxylase subunit alpha : Acetyl-CoA carboxylase, biotin carboxylase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0063 PE=4 SV=1: CPSase_L_chain: CPSase_L_D2: Biotin_carb_C\tK01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]" }, { "name":"SOIL9_11600 acetyl-carboxyl beta subunit : Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=accD PE=3 SV=1: Carboxyl_trans\tK01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]" }, { "name":"SOIL9_16160 -methylene-tetrahydrofolate dehydrogenase : Bifunctional protein FolD OS=Rhodopirellula europaea 6C GN=folD PE=3 SV=1: THF_DHG_CYH: THF_DHG_CYH_C\tK01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) \/ methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]" }, { "name":"SOIL9_32570 -methylenetetrahydrofolate reductase : Methylenetetrahydrofolate reductase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2999 PE=3 SV=1: MTHFR\tK00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]" }, { "name":"SOIL9_07550 acetate kinase : Acetate kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ackA PE=3 SV=1: Acetate_kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]" }, { "name":"SOIL9_38680 acetyl-coenzyme a synthetase : Acetyl-coenzyme A synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=acsA PE=3 SV=1: AMP-binding: AMP-binding_C\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]" } ] }, { "name":"00680 Methane metabolism [PATH:gms00680]", "children":[ { "name":"SOIL9_38310 acetoin dehydrogenase : Alcohol dehydrogenase superfamily, zinc-containing OS=Rhodopseudomonas palustris (strain HaA2) GN=RPB_3806 PE=3 SV=1: ADH_N: ADH_zinc_N\tK00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase \/ alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]" }, { "name":"SOIL9_54220 nadh dehydrogenase : Respiratory-chain NADH dehydrogenase domain 51 kDa subunit OS=Rhodopirellula sallentina SM41 GN=RSSM_02690 PE=4 SV=1: 2Fe-2S_thioredx: Complex1_51K: SLBB: NADH_4Fe-4S\tK22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9]" }, { "name":"SOIL9_10300 serine hydroxymethyltransferase : Serine hydroxymethyltransferase OS=Blastopirellula marina DSM 3645 GN=glyA PE=3 SV=1: SHMT\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" }, { "name":"SOIL9_42310 alanine--glyoxylate aminotransferase : Aminotransferase, class V OS=Planctomyces maris DSM 8797 GN=PM8797T_18841 PE=3 SV=1: Aminotran_5\tK00830 AGXT; alanine-glyoxylate transaminase \/ serine-glyoxylate transaminase \/ serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]" }, { "name":"SOIL9_18080 glycerate kinase : Putative uncharacterized protein OS=uncultured Desulfobacterium sp. GN=N47_E46250 PE=4 SV=1: DUF4147: MOFRL\tK11529 gck; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"SOIL9_22170 enolase : Enolase OS=Brevibacillus panacihumi W25 GN=eno PE=3 SV=1: Enolase_N: Enolase_C\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]" }, { "name":"SOIL9_11650 malate dehydrogenase : Malate dehydrogenase OS=Leptospira borgpetersenii str. UI 09149 GN=mdh PE=3 SV=1: Ldh_1_N: Ldh_1_C\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]" }, { "name":"SOIL9_10520 6-phosphofructokinase : 6-phosphofructokinase OS=bacterium UASB14 GN=U14_03344 PE=4 SV=1: PFK\tK21071 pfk; ATP-dependent phosphofructokinase \/ diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]" }, { "name":"SOIL9_09740 formylmethanofuran dehydrogenase subunit a : Formylmethanofuran dehydrogenase subunit A OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1240 PE=4 SV=1: Amidohydro_3\tK00200 fwdA; formylmethanofuran dehydrogenase subunit A [EC:1.2.7.12]" }, { "name":"SOIL9_85210 formylmethanofuran dehydrogenase subunit b : Formyltransferase\/hydrolase complex subunit B (Fragment) OS=Gemmata sp. Wa1-1 GN=fhcB PE=4 SV=1\tK00201 fwdB; formylmethanofuran dehydrogenase subunit B [EC:1.2.7.12]" }, { "name":"SOIL9_22190 formylmethanofuran dehydrogenase subunit c : Putative GXGXG motif protein OS=uncultured marine microorganism HF4000_APKG8K5 GN=ALOHA_HF4000APKG8K5ctg1g3 PE=4 SV=1: GXGXG\tK00202 fwdC; formylmethanofuran dehydrogenase subunit C [EC:1.2.7.12]" }, { "name":"SOIL9_37840 formyltransferase hydrolase complex subunit d : Formyltransferase\/hydrolase complex subunit D (Fragment) OS=Gemmata sp. Wa1-1 GN=fhcD PE=4 SV=1: FTR: FTR_C\tK00672 ftr; formylmethanofuran--tetrahydromethanopterin N-formyltransferase [EC:2.3.1.101]" }, { "name":"SOIL9_85360 formylmethanofuran--tetrahydromethanopterin formyltransferase : Formyltransferase\/hydrolase complex D subunit (Fragment) OS=uncultured bacterium GN=fhcD PE=4 SV=1: FTR: FTR_C\tK00672 ftr; formylmethanofuran--tetrahydromethanopterin N-formyltransferase [EC:2.3.1.101]" }, { "name":"SOIL9_11460 n -methenyltetrahydromethanopterin cyclohydrolase : Methenyltetrahydromethanopterin cyclohydrolase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1236 PE=4 SV=1: MCH\tK01499 mch; methenyltetrahydromethanopterin cyclohydrolase [EC:3.5.4.27]" }, { "name":"SOIL9_75900 Methylene tetrahydrofolate\/methylene tetrahydromethanopterin dehydrogenase-like protein OS=Gemmata sp. Wa1-1 GN=mtdA PE=4 SV=1: Mpt_N: NAD_binding_10\tK00300 mtdA; methylenetetrahydrofolate\/methylenetetrahydromethanopterin dehydrogenase (NADP+) [EC:1.5.1.5 1.5.1.-]" }, { "name":"SOIL9_33500 aldehyde-activating protein : Formaldehyde-activating enzyme OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4606 PE=4 SV=1: Fae\tK10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147]" }, { "name":"SOIL9_33510 aldehyde-activating protein : Formaldehyde-activating enzyme OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4606 PE=4 SV=1: Fae\tK10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147]" }, { "name":"SOIL9_75910 aldehyde-activating protein : Formaldehyde activating enzyme OS=Gemmata sp. Wa1-1 GN=fae PE=4 SV=1: Fae\tK10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147]" }, { "name":"SOIL9_07550 acetate kinase : Acetate kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ackA PE=3 SV=1: Acetate_kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]" }, { "name":"SOIL9_38680 acetyl-coenzyme a synthetase : Acetyl-coenzyme A synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=acsA PE=3 SV=1: AMP-binding: AMP-binding_C\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]" }, { "name":"SOIL9_41790 phosphoglycerate mutase : Fructose-2,6-bisphosphatase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1498 PE=4 SV=1: His_Phos_1\tK15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]" }, { "name":"SOIL9_54780 phosphoglycerate mutase : Phosphoglycerate mutase OS=uncultured planctomycete GN=HGMM_F48A06C17 PE=4 SV=1: Metalloenzyme: PhosphMutase\tK15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]" }, { "name":"SOIL9_73600 phosphoglycerate mutase : Putative homoserine kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5943 PE=4 SV=1: Metalloenzyme: PhosphMutase\tK15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]" }, { "name":"SOIL9_03290 d-3-phosphoglycerate dehydrogenase : D-3-phosphoglycerate dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6245 PE=3 SV=1: 2-Hacid_dh: 2-Hacid_dh_C\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"SOIL9_06550 phosphoglycerate dehydrogenase : Lactate dehydrogenase-like oxidoreductase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3563 PE=3 SV=1: 2-Hacid_dh: 2-Hacid_dh_C\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"SOIL9_38910 atp-dependent carboxylate-amine ligase : Uncharacterized protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3591 PE=4 SV=1: ATP-grasp_3\tK06914 mfnD; tyramine---L-glutamate ligase [EC:6.3.4.24]" }, { "name":"SOIL9_54320 Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_23711 PE=4 SV=1: DUF556\tK09733 mfnB; (5-formylfuran-3-yl)methyl phosphate synthase [EC:4.2.3.153]" }, { "name":"SOIL9_58910 h4mpt-linked c1 transfer pathway protein : Conserved protein OS=Gemmata sp. Wa1-1 PE=4 SV=1: Hydantoinase_A\tK07072 mfnF; (4-(4-[2-(gamma-L-glutamylamino)ethyl]phenoxymethyl)furan-2-yl)methanamine synthase [EC:2.5.1.131]" } ] }, { "name":"00910 Nitrogen metabolism [PATH:gms00910]", "children":[ { "name":"SOIL9_67690 nitrate nitrite transporter integral membrane protein : Nitrate\/nitrite transporter OS=Thermus oshimai JL-2 GN=Theos_1037 PE=4 SV=1: MFS_1: MFS_1\tK02575 NRT2; MFS transporter, NNP family, nitrate\/nitrite transporter" }, { "name":"SOIL9_67670 nitrite reductase : Nitrite reductase OS=Sorangium cellulosum So0157-2 GN=SCE1572_21180 PE=4 SV=1: Molybdop_Fe4S4: Molybdopterin: Molydop_binding\tK00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]" }, { "name":"SOIL9_67650 nitrite reductase : Nitrite reductase (NAD(P)H), large subunit OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_5852 PE=4 SV=1: Pyr_redox_2: Pyr_redox: Fer2_BFD: NIR_SIR_ferr: NIR_SIR\tK26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]" }, { "name":"SOIL9_67680 nitrite reductase : Nitrite reductase OS=Sorangium cellulosum So0157-2 GN=SCE1572_21175 PE=4 SV=1: Pyr_redox_2: Pyr_redox: Fer2_BFD\tK26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]" }, { "name":"SOIL9_67660 nitrite reductase : Nitrite reductase (NAD(P)H), small subunit OS=Bacillus cellulosilyticus (strain ATCC 21833 \/ DSM 2522 \/ FERM P-1141 \/ JCM 9156 \/ N-4) GN=Bcell_0873 PE=4 SV=1: Rieske_2\tK26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]" }, { "name":"SOIL9_11490 2-nitropropane dioxygenase : 2-nitropropane dioxygenase-like enzyme OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7401 PE=4 SV=1: NMO\tK00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]" }, { "name":"SOIL9_79060 nitrilase : Nitrilase OS=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 GN=ABENE_22140 PE=4 SV=1: CN_hydrolase: ACT_7\tK01501 E3.5.5.1; nitrilase [EC:3.5.5.1]" }, { "name":"SOIL9_23100 glutamate dehydrogenase : Glutamate dehydrogenase OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD2095 PE=3 SV=1: ELFV_dehydrog_N: ELFV_dehydrog\tK00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]" }, { "name":"SOIL9_63500 glutamine synthetase : Glutamine synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4895 PE=3 SV=1: GSIII_N: Gln-synt_C\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"SOIL9_75110 glutamine synthetase : Glutamine synthetase OS=Blastopirellula marina DSM 3645 GN=DSM3645_13233 PE=3 SV=1: Gln-synt_N: Gln-synt_C\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"SOIL9_28980 dihydropyrimidine dehydrogenase subunit a : Glutamate synthase (NADH) small subunit OS=Koribacter versatilis (strain Ellin345) GN=Acid345_3679 PE=4 SV=1: Fer4_20: Pyr_redox_2: Pyr_redox\tK00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]" }, { "name":"SOIL9_14000 glutamate synthase : Glutamate synthase (Ferredoxin) OS=Truepera radiovictrix (strain DSM 17093 \/ CIP 108686 \/ LMG 22925 \/ RQ-24) GN=Trad_0209 PE=4 SV=1: GATase_2: Glu_syn_central: Glu_synthase: GXGXG\tK00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]" }, { "name":"SOIL9_28990 glutamate synthase : Glutamate synthase (NADH) large subunit OS=Chthonomonas calidirosea (strain DSM 23976 \/ ICMP 18418 \/ T49) GN=CCALI_01654 PE=4 SV=1: GATase_2: Glu_syn_central: Glu_synthase: GXGXG\tK00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]" }, { "name":"SOIL9_02390 sulfate transporter : Sulfate permease-like transporter, MFS superfamily OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3353 PE=4 SV=1: Sulfate_tra_GLY: Sulfate_transp: Pro_CA\tK01673 cynT; carbonic anhydrase [EC:4.2.1.1]" }, { "name":"SOIL9_14630 carbonic anhydrase : Carbonic anhydrase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_1495 PE=3 SV=1: Pro_CA\tK01673 cynT; carbonic anhydrase [EC:4.2.1.1]" }, { "name":"SOIL9_49410 carbonic anhydrase : Carbonic anhydrase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_1495 PE=3 SV=1: Pro_CA\tK01673 cynT; carbonic anhydrase [EC:4.2.1.1]" }, { "name":"SOIL9_76970 carbonic anhydrase : Carbonic anhydrase OS=Chondromyces apiculatus DSM 436 GN=CAP_7409 PE=3 SV=1: Pro_CA\tK01673 cynT; carbonic anhydrase [EC:4.2.1.1]" }, { "name":"SOIL9_33860 A-type carbonic anhydrase OS=Blastopirellula marina DSM 3645 GN=DSM3645_10202 PE=4 SV=1: Carb_anhydrase\tK01674 cah; carbonic anhydrase [EC:4.2.1.1]" } ] }, { "name":"00920 Sulfur metabolism [PATH:gms00920]", "children":[ { "name":"SOIL9_18390 abc transporter permease : Sulfate transporter subunit OS=Massilia consociata GN=JN27_15615 PE=4 SV=1: SBP_bac_11\tK23163 sbp; sulfate\/thiosulfate transport system substrate-binding protein" }, { "name":"SOIL9_21560 sulfate thiosulfate transporter subunit : Sulfate\/thiosulfate transporter subunit OS=Mesorhizobium sp. L48C026A00 GN=X737_29710 PE=4 SV=1: BPD_transp_1\tK02046 cysU; sulfate\/thiosulfate transport system permease protein" }, { "name":"SOIL9_21570 sulfate abc permease : Sulfate ABC transporter, permease CysW OS=Acinetobacter nectaris CIP 110549 GN=P256_00304 PE=4 SV=1: BPD_transp_1\tK02047 cysW; sulfate\/thiosulfate transport system permease protein" }, { "name":"SOIL9_21580 sulfate abc transporter : Sulfate\/thiosulfate import ATP-binding protein CysA OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=cysA PE=3 SV=1: ABC_tran: TOBE_3\tK02045 cysA; sulfate\/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]" }, { "name":"SOIL9_20810 NMT1\/THI5 like domain protein OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD2548 PE=4 SV=1: NMT1_2\tK15553 ssuA; sulfonate transport system substrate-binding protein" }, { "name":"SOIL9_20820 abc transporter permease : Binding-protein-dependent transport systems inner membrane component OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD2549 PE=3 SV=1: BPD_transp_1\tK15554 ssuC; sulfonate transport system permease protein" }, { "name":"SOIL9_20830 abc transporter atp-binding protein : ABC transporter related-protein OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD2550 PE=3 SV=1: ABC_tran\tK15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]" }, { "name":"SOIL9_42720 bifunctional sulfate adenylyltransferase subunit 1 adenylylsulfate kinase protein : Sulfate adenylyltransferase subunit 1 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=cysN PE=3 SV=1: GTP_EFTU: GTP_EFTU_D2: APS_kinase\tK00955 cysNC; bifunctional enzyme CysN\/CysC [EC:2.7.7.4 2.7.1.25]" }, { "name":"SOIL9_42740 sulfate adenylyltransferase subunit 2 : Sulfate adenylyltransferase subunit 2 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=cysD PE=3 SV=1: PAPS_reduct\tK00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]" }, { "name":"SOIL9_07280 adenylylsulfate kinase : Adenylyl-sulfate kinase OS=gamma proteobacterium BDW918 GN=cysC PE=3 SV=1: APS_kinase\tK00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]" }, { "name":"SOIL9_16180 inositol monophosphatase : Marine sediment metagenome DNA, contig: S01H1_S20488 (Fragment) OS=marine sediment metagenome GN=S01H1_54351 PE=4 SV=1: Inositol_P\tK01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]" }, { "name":"SOIL9_66330 phosphoesterase domain protein : Exopolyphosphatase-like enzyme OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6677 PE=4 SV=1: DHH: DHHA1\tK06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]" }, { "name":"SOIL9_62470 phosphoadenosine phosphosulfate reductase : Phosphoadenosine phosphosulfate reductase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=cysH PE=3 SV=1: PAPS_reduct\tK00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]" }, { "name":"SOIL9_62710 sulfite reductase : Sulfite reductase, beta subunit (Hemoprotein) OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4901 PE=4 SV=1: NIR_SIR_ferr: NIR_SIR: NIR_SIR_ferr: NIR_SIR\tK00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]" }, { "name":"SOIL9_47510 thiosulfate sulfurtransferase : Sulfurtransferase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2817 PE=4 SV=1: Rhodanese: Rhodanese\tK01011 TST; thiosulfate\/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]" }, { "name":"SOIL9_82380 Marine sediment metagenome DNA, contig: S01H1_S18985 (Fragment) OS=marine sediment metagenome GN=S01H1_52237 PE=4 SV=1: Rhodanese: Rhodanese\tK01011 TST; thiosulfate\/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]" }, { "name":"SOIL9_13760 serine o-acetyltransferase : Serine acetyltransferase OS=Chondromyces apiculatus DSM 436 GN=CAP_8914 PE=3 SV=1: Hexapep\tK00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]" }, { "name":"SOIL9_71120 serine o-acetyltransferase : Serine acetyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6197 PE=4 SV=1: Hexapep: Hexapep_2\tK00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]" }, { "name":"SOIL9_40400 cysteine synthase : Cysteine synthase A OS=Rhodopirellula maiorica SM1 GN=RMSM_00239 PE=4 SV=1: PALP\tK01738 cysK; cysteine synthase [EC:2.5.1.47]" }, { "name":"SOIL9_70840 cysteine synthase : Cysteine synthase A OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2591 PE=4 SV=1: PALP\tK01738 cysK; cysteine synthase [EC:2.5.1.47]" }, { "name":"SOIL9_74610 cysteine synthase : Cysteine synthase OS=Cystobacter violaceus Cb vi76 GN=Q664_19850 PE=4 SV=1: PALP\tK01738 cysK; cysteine synthase [EC:2.5.1.47]" }, { "name":"SOIL9_59250 selenium-binding protein : Selenium-binding protein OS=Chroococcidiopsis thermalis PCC 7203 GN=Chro_2931 PE=4 SV=1: SBP56\tK17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4]" }, { "name":"SOIL9_46010 alkanesulfonate monooxygenase : Gll4257 protein OS=Gloeobacter violaceus (strain PCC 7421) GN=gll4257 PE=4 SV=1: Bac_luciferase\tK17228 sfnG; dimethylsulfone monooxygenase [EC:1.14.14.35]" } ] } ] }, { "name":"09103 Lipid metabolism", "children":[ { "name":"00061 Fatty acid biosynthesis [PATH:gms00061]", "children":[ { "name":"SOIL9_27590 acetyl-carboxylase subunit alpha : Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=accA PE=3 SV=1: ACCA\tK01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]" }, { "name":"SOIL9_72090 acetyl-carboxylase biotin carboxyl carrier protein : Biotin carboxyl carrier protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2167 PE=4 SV=1: Biotin_lipoyl\tK02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein" }, { "name":"SOIL9_72100 acetyl-carboxylase subunit alpha : Acetyl-CoA carboxylase, biotin carboxylase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0063 PE=4 SV=1: CPSase_L_chain: CPSase_L_D2: Biotin_carb_C\tK01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]" }, { "name":"SOIL9_11600 acetyl-carboxyl beta subunit : Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=accD PE=3 SV=1: Carboxyl_trans\tK01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]" }, { "name":"SOIL9_54110 Acyl carrier protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5566 PE=4 SV=1: PP-binding\tK02078 acpP; acyl carrier protein" }, { "name":"SOIL9_62310 acyl carrier protein : Acyl carrier protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=acpP PE=3 SV=1: PP-binding\tK02078 acpP; acyl carrier protein" }, { "name":"SOIL9_72180 acyl carrier protein : Acyl carrier protein OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=acpP PE=3 SV=1: PP-binding\tK02078 acpP; acyl carrier protein" }, { "name":"SOIL9_62320 malonyl -acyl carrier protein transacylase : Malonyl CoA-acyl carrier protein transacylase OS=uncultured Acidobacteria bacterium A2 PE=3 SV=1: Acyl_transf_1\tK00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]" }, { "name":"SOIL9_17540 3-oxoacyl-acp synthase : 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=fabH PE=3 SV=1: ACP_syn_III: ACP_syn_III_C\tK00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]" }, { "name":"SOIL9_75360 3-oxoacyl-acp synthase : 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Clostridium sordellii GN=fabH PE=4 SV=1: ACP_syn_III: ACP_syn_III_C\tK00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]" }, { "name":"SOIL9_83850 3-oxoacyl-acp synthase : 3-oxoacyl-ACP synthase OS=Chlorobium sp. GBChlB GN=HY22_03720 PE=4 SV=1: ACP_syn_III: ACP_syn_III_C\tK00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]" }, { "name":"SOIL9_12770 3-oxoacyl-acp synthase : 3-oxoacyl-(Acyl-carrier-protein) synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1387 PE=3 SV=1: ketoacyl-synt: Ketoacyl-synt_C\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"SOIL9_55330 3-oxoacyl-acp synthase : 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3120 PE=3 SV=1: ketoacyl-synt: Ketoacyl-synt_C\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"SOIL9_55340 3-oxoacyl-acp synthase : 3-oxoacyl-(Acyl carrier protein) synthase OS=Planctomyces maris DSM 8797 GN=PM8797T_28459 PE=3 SV=1: ketoacyl-synt: Ketoacyl-synt_C\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"SOIL9_62300 3-oxoacyl-acp synthase : 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=uncultured Acidobacteria bacterium A2 PE=3 SV=1: ketoacyl-synt: Ketoacyl-synt_C\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"SOIL9_72150 3-oxoacyl-acp synthase : 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3120 PE=3 SV=1: ketoacyl-synt: Ketoacyl-synt_C\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"SOIL9_72160 3-oxoacyl-acp synthase : 3-oxoacyl-(Acyl carrier protein) synthase OS=Planctomyces maris DSM 8797 GN=PM8797T_28459 PE=3 SV=1: ketoacyl-synt: Ketoacyl-synt_C\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"SOIL9_04740 3-ketoacyl-acp reductase : Short-chain dehydrogenase\/reductase SDR OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_5617 PE=3 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_06020 3-oxoacyl-acp reductase : Short-chain dehydrogenase\/reductase SDR OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_6588 PE=3 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_09470 short-chain dehydrogenase reductase sdr : Short-chain dehydrogenase\/reductase SDR OS=Pseudomonas viridiflava UASWS0038 GN=AAI_04629 PE=3 SV=1: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_12530 oxidoreductase : Short-chain dehydrogenase OS=Bradyrhizobium japonicum SEMIA 5079 GN=BJS_02062 PE=4 SV=1: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_12540 oxidoreductase : Oxidoreductase OS=Calothrix sp. 336\/3 GN=IJ00_10970 PE=3 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_24270 3-ketoacyl-acp reductase : 3-oxoacyl-[acyl-carrier-protein] reductase protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_05944 PE=3 SV=1: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_32060 oxidoreductase : 3-oxoacyl-(Acyl-carrier-protein) reductase OS=Granulicella mallensis (strain ATCC BAA-1857 \/ DSM 23137 \/ MP5ACTX8) GN=AciX8_0105 PE=4 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_35470 oxidoreductase : Oxidoreductase OS=Burkholderia grimmiae GN=BG57_27380 PE=4 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_72190 3-oxoacyl-(acyl-carrier-protein) reductase : 3-oxoacyl-(Acyl-carrier protein) reductase OS=Planctomyces maris DSM 8797 GN=PM8797T_12848 PE=3 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_75490 3-oxoacyl-acp reductase : Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1242 PE=4 SV=1: HPPK: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_77780 oxidoreductase : Putative short-chain dehydrogenase OS=Planctomyces maris DSM 8797 GN=PM8797T_09224 PE=3 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_79360 short-chain dehydrogenase : 3-oxoacyl-(Acyl-carrier-protein) reductase OS=Runella slithyformis (strain ATCC 29530 \/ DSM 19594 \/ LMG 11500 \/ NCIMB 11436 \/ LSU 4) GN=Runsl_1409 PE=4 SV=1: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_79600 short-chain dehydrogenase : Short chain dehydrogenase family protein OS=Mesorhizobium huakuii 7653R GN=fabG20 PE=3 SV=1: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_81440 oxidoreductase : Oxidoreductase OS=Burkholderia grimmiae GN=BG57_27380 PE=4 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_24370 Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabA\/FabZ OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0858 PE=4 SV=1: FabA\tK02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]" }, { "name":"SOIL9_72170 Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabA\/FabZ OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3121 PE=4 SV=1: FabA\tK02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]" }, { "name":"SOIL9_72200 hydroxymyristoyl-acp dehydratase : Marine sediment metagenome DNA, contig: S06H3_S02804 OS=marine sediment metagenome GN=S06H3_29562 PE=4 SV=1: FabA\tK02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]" }, { "name":"SOIL9_50820 enoyl-: Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02448 PE=4 SV=1: adh_short_C2\tK00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]" }, { "name":"SOIL9_22420 acyl-acp desaturase : Acyl-ACP desaturase OS=Sorangium cellulosum So0157-2 GN=SCE1572_15120 PE=4 SV=1: FA_desaturase_2\tK03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]" }, { "name":"SOIL9_55350 acyl-acp partial : Fatty acid desaturase, type 2 OS=Cystobacter fuscus DSM 2262 GN=D187_006472 PE=4 SV=1: FA_desaturase_2\tK03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]" } ] }, { "name":"00062 Fatty acid elongation" }, { "name":"00071 Fatty acid degradation [PATH:gms00071]", "children":[ { "name":"SOIL9_50660 acetyl-acetyltransferase : Acetyl-CoA acetyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6120 PE=3 SV=1: Thiolase_N: Thiolase_C\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SOIL9_02200 amp-dependent synthetase and ligase : AMP-dependent synthetase and ligase OS=Geobacter sp. (strain M21) GN=GM21_0285 PE=4 SV=1: Acyltransferase: AMP-binding\tK05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase \/ long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]" }, { "name":"SOIL9_38310 acetoin dehydrogenase : Alcohol dehydrogenase superfamily, zinc-containing OS=Rhodopseudomonas palustris (strain HaA2) GN=RPB_3806 PE=3 SV=1: ADH_N: ADH_zinc_N\tK00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase \/ alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]" }, { "name":"SOIL9_59540 betaine-aldehyde dehydrogenase : Aldehyde dehydrogenase (Acceptor) OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_2599 PE=3 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_82990 aldehyde dehydrogenase : Aldehyde dehydrogenase OS=uncultured planctomycete GN=HGMM_F16E03C18 PE=4 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" } ] }, { "name":"00073 Cutin, suberine and wax biosynthesis" }, { "name":"00074 Mycolic acid biosynthesis [PATH:gms00074]", "children":[ { "name":"SOIL9_07700 acp synthase : Holo-[acyl-carrier-protein] synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=acpS PE=3 SV=1: ACPS\tK00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]" }, { "name":"SOIL9_54110 Acyl carrier protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5566 PE=4 SV=1: PP-binding\tK02078 acpP; acyl carrier protein" }, { "name":"SOIL9_62310 acyl carrier protein : Acyl carrier protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=acpP PE=3 SV=1: PP-binding\tK02078 acpP; acyl carrier protein" }, { "name":"SOIL9_72180 acyl carrier protein : Acyl carrier protein OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=acpP PE=3 SV=1: PP-binding\tK02078 acpP; acyl carrier protein" }, { "name":"SOIL9_62320 malonyl -acyl carrier protein transacylase : Malonyl CoA-acyl carrier protein transacylase OS=uncultured Acidobacteria bacterium A2 PE=3 SV=1: Acyl_transf_1\tK00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]" }, { "name":"SOIL9_22420 acyl-acp desaturase : Acyl-ACP desaturase OS=Sorangium cellulosum So0157-2 GN=SCE1572_15120 PE=4 SV=1: FA_desaturase_2\tK03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]" }, { "name":"SOIL9_55350 acyl-acp partial : Fatty acid desaturase, type 2 OS=Cystobacter fuscus DSM 2262 GN=D187_006472 PE=4 SV=1: FA_desaturase_2\tK03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]" } ] }, { "name":"00100 Steroid biosynthesis", "children":[ { "name":"SOIL9_22870 monooxygenase family protein : Squalene epoxidase OS=Prochloron didemni P2-Fiji GN=terF PE=4 SV=1: SE\tK00511 SQLE; squalene monooxygenase [EC:1.14.14.17]" } ] }, { "name":"00120 Primary bile acid biosynthesis" }, { "name":"00121 Secondary bile acid biosynthesis" }, { "name":"00140 Steroid hormone biosynthesis" }, { "name":"00561 Glycerolipid metabolism [PATH:gms00561]", "children":[ { "name":"SOIL9_18080 glycerate kinase : Putative uncharacterized protein OS=uncultured Desulfobacterium sp. GN=N47_E46250 PE=4 SV=1: DUF4147: MOFRL\tK11529 gck; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"SOIL9_59540 betaine-aldehyde dehydrogenase : Aldehyde dehydrogenase (Acceptor) OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_2599 PE=3 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_82990 aldehyde dehydrogenase : Aldehyde dehydrogenase OS=uncultured planctomycete GN=HGMM_F16E03C18 PE=4 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_45700 zinc-binding dehydrogenase family protein : Alcohol dehydrogenase OS=Opitutaceae bacterium TAV5 GN=OPIT5_29055 PE=3 SV=1: ADH_N: ADH_zinc_N\tK13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]" }, { "name":"SOIL9_82610 glycerol kinase : Glycerol kinase OS=Thermobacillus composti (strain DSM 18247 \/ JCM 13945 \/ KWC4) GN=glpK PE=3 SV=1: FGGY_N: FGGY_C\tK00864 glpK; glycerol kinase [EC:2.7.1.30]" }, { "name":"SOIL9_84190 phosphate acyltransferase : Phosphate acyltransferase OS=uncultured Acidobacteria bacterium A2 GN=plsX PE=3 SV=1: FA_synthesis\tK03621 plsX; phosphate acyltransferase [EC:2.3.1.274]" }, { "name":"SOIL9_07600 glycerol-3-phosphate acyltransferase : Glycerol-3-phosphate acyltransferase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=plsY PE=3 SV=1: G3P_acyltransf: DUF4149\tK08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]" }, { "name":"SOIL9_29830 1-acyl-sn-glycerol-3-phosphate acyltransferase : 1-acyl-sn-glycerol-3-phosphate acyltransferase OS=uncultured planctomycete GN=HGMM_F09D09C25 PE=4 SV=1: Acyltransferase\tK00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]" }, { "name":"SOIL9_12190 diacylglycerol kinase catalytic subunit : Putative uncharacterized protein OS=Anaerolinea thermophila (strain DSM 14523 \/ JCM 11388 \/ NBRC 100420 \/ UNI-1) GN=ANT_25680 PE=4 SV=1: DAGK_cat\tK07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]" }, { "name":"SOIL9_20040 alpha beta-hydrolase : Putative esterase OS=uncultured microorganism PE=4 SV=1: PGAP1\tK01046 lip; triacylglycerol lipase [EC:3.1.1.3]" }, { "name":"SOIL9_56550 Glycosyl transferase, group 1 family protein OS=Rhodospirillum centenum (strain ATCC 51521 \/ SW) GN=RC1_2250 PE=4 SV=1: Glycos_transf_1\tK27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase\/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]" } ] }, { "name":"00564 Glycerophospholipid metabolism [PATH:gms00564]", "children":[ { "name":"SOIL9_83030 glycerol-3-phosphate dehydrogenase : Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Planctomyces maris DSM 8797 GN=gpsA PE=3 SV=1: NAD_Gly3P_dh_N: NAD_Gly3P_dh_C\tK00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]" }, { "name":"SOIL9_38870 glycerol-3-phosphate dehydrogenase : Glycerol-3-phosphate dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1072 PE=3 SV=1: DAO\tK00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]" }, { "name":"SOIL9_07600 glycerol-3-phosphate acyltransferase : Glycerol-3-phosphate acyltransferase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=plsY PE=3 SV=1: G3P_acyltransf: DUF4149\tK08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]" }, { "name":"SOIL9_29830 1-acyl-sn-glycerol-3-phosphate acyltransferase : 1-acyl-sn-glycerol-3-phosphate acyltransferase OS=uncultured planctomycete GN=HGMM_F09D09C25 PE=4 SV=1: Acyltransferase\tK00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]" }, { "name":"SOIL9_12190 diacylglycerol kinase catalytic subunit : Putative uncharacterized protein OS=Anaerolinea thermophila (strain DSM 14523 \/ JCM 11388 \/ NBRC 100420 \/ UNI-1) GN=ANT_25680 PE=4 SV=1: DAGK_cat\tK07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]" }, { "name":"SOIL9_07400 glycerophosphoryl diester phosphodiesterase : Glycerophosphoryl diester phosphodiesterase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5378 PE=4 SV=1: GDPD\tK01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]" }, { "name":"SOIL9_64420 glycerophosphoryl diester phosphodiesterase : Glycerophosphoryl diester phosphodiesterase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4751 PE=4 SV=1: GDPD: GDPD\tK01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]" }, { "name":"SOIL9_71740 glycerophosphoryl diester phosphodiesterase : Glycerophosphoryl diester phosphodiesterase OS=Candidatus Chloracidobacterium thermophilum GN=YS_M60-F11.204 PE=4 SV=1: GDPD\tK01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]" }, { "name":"SOIL9_02200 amp-dependent synthetase and ligase : AMP-dependent synthetase and ligase OS=Geobacter sp. (strain M21) GN=GM21_0285 PE=4 SV=1: Acyltransferase: AMP-binding\tK05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase \/ long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]" }, { "name":"SOIL9_29000 ethanolamine ammonia lyase large subunit : Ethanolamine ammonia-lyase, large subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5210 PE=4 SV=1: EutB\tK03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]" }, { "name":"SOIL9_30870 ethanolamine ammonia-lyase : Ethanolamine ammonia-lyase light chain OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5208 PE=4 SV=1: EutC\tK03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]" }, { "name":"SOIL9_46850 sam-dependent methyltransferase : Ribosomal RNA adenine methylase transferase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2139 PE=4 SV=1: RrnaAD\tK00570 pmtA; phosphatidylethanolamine\/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]" }, { "name":"SOIL9_40780 phosphatidate cytidylyltransferase : CDP-diglyceride synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6806 PE=4 SV=1: CTP_transf_1\tK00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]" }, { "name":"SOIL9_64080 cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase : CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Rhodopirellula baltica (strain SH1) GN=pgsA PE=3 SV=1: CDP-OH_P_transf\tK00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]" }, { "name":"SOIL9_14160 cardiolipin synthetase : Cardiolipin synthetase OS=Paenibacillus dendritiformis C454 GN=cls PE=3 SV=1: PLDc_N: PLDc_2: PLDc_2\tK06131 clsA_B; cardiolipin synthase A\/B [EC:2.7.8.-]" }, { "name":"SOIL9_08720 dehydrogenase : Glycerol dehydrogenase OS=Chondromyces apiculatus DSM 436 GN=CAP_4195 PE=4 SV=1: Fe-ADH_2\tK00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]" } ] }, { "name":"00565 Ether lipid metabolism" }, { "name":"00600 Sphingolipid metabolism [PATH:gms00600]", "children":[ { "name":"SOIL9_64640 arylsulfatase : Uncharacterized protein OS=Bradyrhizobium japonicum SEMIA 5079 GN=BJS_03493 PE=4 SV=1: Sulfatase\tK01130 atsA; arylsulfatase [EC:3.1.6.1]" }, { "name":"SOIL9_64650 arylsulfatase : Arylsulfatase OS=Flavobacterium hydatis GN=IW20_13330 PE=4 SV=1: Sulfatase\tK01130 atsA; arylsulfatase [EC:3.1.6.1]" }, { "name":"SOIL9_46700 exo-alpha-sialidase : Exo-alpha-sialidase OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_3506 PE=4 SV=1: BNR_2\tK01186 NEU1; sialidase-1 [EC:3.2.1.18]" } ] }, { "name":"00590 Arachidonic acid metabolism", "children":[ { "name":"SOIL9_39220 lipoxygenase : Lipoxygenase OS=Pseudanabaena biceps PCC 7429 GN=Pse7429DRAFT_4575 PE=4 SV=1: Lipoxygenase\tK19246 loxA; arachidonate 15-lipoxygenase [EC:1.13.11.33]" } ] }, { "name":"00591 Linoleic acid metabolism" }, { "name":"00592 alpha-Linolenic acid metabolism" }, { "name":"01040 Biosynthesis of unsaturated fatty acids [PATH:gms01040]", "children":[ { "name":"SOIL9_22900 delta 9 acyl-lipid fatty acid desaturase : Fatty acid desaturase OS=Salinisphaera hydrothermalis C41B8 GN=C41B8_13055 PE=4 SV=1: FA_desaturase\tK00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]" }, { "name":"SOIL9_31070 stearoyl-9-desaturase : Stearoyl-CoA 9-desaturase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3878 PE=4 SV=1: FA_desaturase\tK00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]" }, { "name":"SOIL9_81250 stearoyl-9-desaturase : Stearoyl-CoA 9-desaturase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3878 PE=4 SV=1: FA_desaturase\tK00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]" }, { "name":"SOIL9_83110 delta 9 acyl-lipid fatty acid desaturase : Fatty acid desaturase OS=Salinisphaera hydrothermalis C41B8 GN=C41B8_13055 PE=4 SV=1: FA_desaturase\tK00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]" }, { "name":"SOIL9_83800 stearoyl-9-desaturase : Stearoyl-CoA 9-desaturase OS=Leptospira wolbachii serovar Codice str. CDC GN=LEP1GSC195_3118 PE=4 SV=1: FA_desaturase\tK00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]" }, { "name":"SOIL9_22420 acyl-acp desaturase : Acyl-ACP desaturase OS=Sorangium cellulosum So0157-2 GN=SCE1572_15120 PE=4 SV=1: FA_desaturase_2\tK03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]" }, { "name":"SOIL9_55350 acyl-acp partial : Fatty acid desaturase, type 2 OS=Cystobacter fuscus DSM 2262 GN=D187_006472 PE=4 SV=1: FA_desaturase_2\tK03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]" }, { "name":"SOIL9_63980 Thioesterase superfamily protein OS=Rhodopirellula maiorica SM1 GN=RMSM_04703 PE=4 SV=1: 4HBT\tK10806 yciA; acyl-CoA thioesterase [EC:3.1.2.-]" } ] } ] }, { "name":"09104 Nucleotide metabolism", "children":[ { "name":"00230 Purine metabolism [PATH:gms00230]", "children":[ { "name":"SOIL9_54600 adp-ribose pyrophosphatase : NTP pyrophosphohydrolase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5018 PE=3 SV=1: NUDIX\tK01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]" }, { "name":"SOIL9_08810 phosphoglucomutase : Phosphoglucomutase OS=Rhodovulum sp. PH10 GN=A33M_3475 PE=3 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III: PGM_PMM_IV\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"SOIL9_23680 phosphoglucomutase : Phosphoglucomutase OS=Rhodovulum sp. PH10 GN=A33M_3475 PE=3 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III: PGM_PMM_IV\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"SOIL9_27840 phosphoglucomutase : Uncharacterized protein OS=Candidatus Entotheonella sp. TSY2 GN=ETSY2_36385 PE=4 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"SOIL9_03320 ribose-phosphate pyrophosphokinase : Ribose-phosphate pyrophosphokinase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=prs PE=3 SV=1: Pribosyltran_N: Pribosyl_synth\tK00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]" }, { "name":"SOIL9_80440 amidophosphoribosyltransferase : Amidophosphoribosyltransferase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2159 PE=3 SV=1: GATase_6: Pribosyltran\tK00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]" }, { "name":"SOIL9_71990 phosphoribosylamine--glycine ligase : Phosphoribosylamine--glycine ligase OS=Rhodopirellula sp. SWK7 GN=purD PE=3 SV=1: GARS_N: GARS_A: GARS_C\tK01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]" }, { "name":"SOIL9_72000 phosphoribosylglycinamide formyltransferase : Phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1572 PE=4 SV=1: Formyl_trans_N\tK11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]" }, { "name":"SOIL9_22380 phosphoribosylformylglycinamidine synthase i : Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1060 PE=3 SV=1: GATase_5\tK23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ \/ glutaminase [EC:6.3.5.3 3.5.1.2]" }, { "name":"SOIL9_19380 phosphoribosylformylglycinamidine synthase ii : Phosphoribosylformylglycinamidine synthase subunit PurL OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=purL PE=3 SV=1: AIRS: AIRS_C: AIRS: AIRS_C\tK23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3]" }, { "name":"SOIL9_05730 phosphoribosylformylglycinamidine cyclo-ligase : Phosphoribosylformylglycinamidine cyclo-ligase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=purM PE=3 SV=1: AIRS: AIRS_C\tK01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]" }, { "name":"SOIL9_00970 phosphoribosylaminoimidazole carboxylase : N5-carboxyaminoimidazole ribonucleotide synthase OS=Marinithermus hydrothermalis (strain DSM 14884 \/ JCM 11576 \/ T1) GN=Marky_1688 PE=3 SV=1: ATP-grasp\tK01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]" }, { "name":"SOIL9_00960 n5-carboxyaminoimidazole ribonucleotide mutase : N5-carboxyaminoimidazole ribonucleotide mutase OS=Pseudomonas sp. GM21 GN=PMI22_00367 PE=3 SV=1: AIRC\tK01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]" }, { "name":"SOIL9_23150 phosphoribosylaminoimidazole-succinocarboxamide synthase : Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Blastopirellula marina DSM 3645 GN=purC PE=3 SV=1: SAICAR_synt\tK01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]" }, { "name":"SOIL9_34230 adenylosuccinate lyase : Adenylosuccinate lyase OS=uncultured planctomycete GN=HGMM_F33C03C06 PE=3 SV=1: Lyase_1: ADSL_C\tK01756 purB; adenylosuccinate lyase [EC:4.3.2.2]" }, { "name":"SOIL9_54710 purine biosynthesis protein purh : Bifunctional purine biosynthesis protein PurH OS=Desulfotomaculum ruminis (strain ATCC 23193 \/ DSM 2154 \/ NCIB 8452 \/ DL) GN=purH PE=3 SV=1: MGS: AICARFT_IMPCHas\tK00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase \/ IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]" }, { "name":"SOIL9_69450 adenine phosphoribosyltransferase : Adenine phosphoribosyltransferase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=apt PE=3 SV=1: Pribosyltran\tK00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]" }, { "name":"SOIL9_06860 stationary phase survival protein : Stationary-phase survival protein SurE OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_0037 PE=4 SV=1: SurE\tK03787 surE; 5'\/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]" }, { "name":"SOIL9_23500 stationary phase survival protein : 5'-nucleotidase SurE OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=surE PE=3 SV=1: SurE\tK03787 surE; 5'\/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]" }, { "name":"SOIL9_80310 had-superfamily subfamily iia : Putative sugar phosphatase of HAD superfamily OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3472 PE=4 SV=1: Hydrolase_6: Hydrolase_like\tK02566 nagD; 5'-nucleotidase [EC:3.1.3.5]" }, { "name":"SOIL9_37970 purine nucleoside phosphorylase : Purine nucleoside phosphorylase OS=Dorea longicatena CAG:42 GN=BN651_01432 PE=3 SV=1: PNP_UDP_1\tK03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]" }, { "name":"SOIL9_41970 purine nucleoside phosphorylase : Purine nucleoside phosphorylase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1303 PE=3 SV=1: PNP_UDP_1\tK03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]" }, { "name":"SOIL9_72780 hypoxanthine phosphoribosyltransferase : Hypoxanthine phosphoribosyltransferase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1642 PE=4 SV=1: Pribosyltran\tK00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]" }, { "name":"SOIL9_58080 inosine-5 -monophosphate dehydrogenase : Inosine-5'-monophosphate dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=guaB PE=3 SV=1: IMPDH: CBS: CBS\tK00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]" }, { "name":"SOIL9_72600 nucleoside diphosphate kinase : Nucleoside diphosphate kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ndk PE=3 SV=1: NDK\tK00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]" }, { "name":"SOIL9_63290 ntp phosphatase : Non-canonical purine NTP pyrophosphatase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2323 PE=3 SV=1: Ham1p_like\tK01519 rdgB; XTP\/dITP diphosphohydrolase [EC:3.6.1.66]" }, { "name":"SOIL9_60920 aldehyde oxidase : Periplasmic aromatic aldehyde oxidoreductase OS=Hyalangium minutum GN=DB31_7269 PE=4 SV=1: Ald_Xan_dh_C: Ald_Xan_dh_C2\tK11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]" }, { "name":"SOIL9_60930 fad-binding molybdopterin dehydrogenase : Periplasmic aromatic aldehyde oxidoreductase OS=Hyalangium minutum GN=DB31_7270 PE=4 SV=1: FAD_binding_5: CO_deh_flav_C\tK11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]" }, { "name":"SOIL9_60940 xanthine dehydrogenase - iron-sulfur binding subunit : Periplasmic aromatic aldehyde oxidoreductase, iron-sulfur subunit YagT OS=Hyalangium minutum GN=DB31_7271 PE=4 SV=1: Fer2: Fer2_2\tK13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit" }, { "name":"SOIL9_00600 gmp synthase : GMP synthase [glutamine-hydrolyzing] OS=Rhodopirellula baltica (strain SH1) GN=guaA PE=3 SV=1: GATase: NAD_synthase: GMP_synt_C\tK01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]" }, { "name":"SOIL9_59750 guanylate kinase : Guanylate kinase OS=Fusobacterium sp. CAG:439 GN=gmk PE=3 SV=1: Guanylate_kin\tK00942 gmk; guanylate kinase [EC:2.7.4.8]" }, { "name":"SOIL9_40630 ribonucleoside-diphosphate adenosylcobalamin-dependent : Ribonucleoside-diphosphate reductase subunit alpha OS=Melioribacter roseus (strain JCM 17771 \/ P3M-2) GN=MROS_2107 PE=4 SV=1: Ribonuc_red_2_N: Ribonuc_red_lgC: Ribonuc_red_lgC: TSCPD\tK00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]" }, { "name":"SOIL9_40860 ribonucleoside-diphosphate reductase : Ribonucleoside-diphosphate reductase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0900 PE=3 SV=1: ATP-cone: Ribonuc_red_lgN: Ribonuc_red_lgC\tK00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]" }, { "name":"SOIL9_40850 ribonucleoside-diphosphate reductase : Ribonucleoside-diphosphate reductase subunit beta OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0901 PE=3 SV=1: Ribonuc_red_sm\tK00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]" }, { "name":"SOIL9_58280 deoxyguanosinetriphosphate triphosphohydrolase : Deoxyguanosinetriphosphate triphosphohydrolase-like protein OS=planctomycete KSU-1 GN=KSU1_D0957 PE=3 SV=1: HD: HD_assoc\tK01129 dgt; dGTPase [EC:3.1.5.1]" }, { "name":"SOIL9_61630 deoxyguanosinetriphosphate triphosphohydrolase : dGTPase OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_3120 PE=4 SV=1: HD\tK01129 dgt; dGTPase [EC:3.1.5.1]" }, { "name":"SOIL9_18480 Metal dependent phosphohydrolase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0189 PE=4 SV=1: HD_4\tK21138 HDDC3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2]" }, { "name":"SOIL9_18440 adenylate guanylate cyclase : Family 3 adenylate cyclase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4915 PE=4 SV=1: Guanylate_cyc\tK01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]" }, { "name":"SOIL9_18570 adenylate guanylate cyclase : Probable adenylate cyclase OS=Planctomyces maris DSM 8797 GN=PM8797T_31900 PE=4 SV=1: Guanylate_cyc\tK01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]" }, { "name":"SOIL9_83390 adenylate guanylate cyclase : Probable adenylate cyclase OS=Planctomyces maris DSM 8797 GN=PM8797T_31900 PE=4 SV=1: Guanylate_cyc\tK01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]" }, { "name":"SOIL9_56720 Adenylyl cyclase CyaB, putative OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5239 PE=4 SV=1: CYTH\tK05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]" }, { "name":"SOIL9_40810 adenylosuccinate synthetase : Adenylosuccinate synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=purA PE=3 SV=1: Adenylsucc_synt\tK01939 purA; adenylosuccinate synthase [EC:6.3.4.4]" }, { "name":"SOIL9_18630 amp nucleosidase : AMP nucleosidase, putative OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3451 PE=4 SV=1: PNP_UDP_1\tK01241 amn; AMP nucleosidase [EC:3.2.2.4]" }, { "name":"SOIL9_84780 adenylate kinase : Adenylate kinase OS=Streptomyces hygroscopicus subsp. jinggangensis (strain 5008) GN=adk PE=3 SV=1: ADK: ADK_lid\tK00939 adk; adenylate kinase [EC:2.7.4.3]" }, { "name":"SOIL9_09100 metallophosphoesterase : Uncharacterized protein OS=Bradyrhizobium sp. DFCI-1 GN=C207_03227 PE=4 SV=1: Metallophos_2\tK03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]" }, { "name":"SOIL9_12390 metallophosphoesterase : Metallophosphoesterase OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD0431 PE=4 SV=1: Metallophos\tK03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]" }, { "name":"SOIL9_84040 metallophosphoesterase : Tat pathway signal sequence domain protein OS=Sphingobacterium spiritivorum ATCC 33300 GN=HMPREF0765_2449 PE=4 SV=1: Metallophos\tK03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]" }, { "name":"SOIL9_84170 hit family hydrolase : Histidine triad (HIT) protein OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_3829 PE=4 SV=1: HIT\tK19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]" }, { "name":"SOIL9_42720 bifunctional sulfate adenylyltransferase subunit 1 adenylylsulfate kinase protein : Sulfate adenylyltransferase subunit 1 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=cysN PE=3 SV=1: GTP_EFTU: GTP_EFTU_D2: APS_kinase\tK00955 cysNC; bifunctional enzyme CysN\/CysC [EC:2.7.7.4 2.7.1.25]" }, { "name":"SOIL9_07280 adenylylsulfate kinase : Adenylyl-sulfate kinase OS=gamma proteobacterium BDW918 GN=cysC PE=3 SV=1: APS_kinase\tK00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]" }, { "name":"SOIL9_42740 sulfate adenylyltransferase subunit 2 : Sulfate adenylyltransferase subunit 2 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=cysD PE=3 SV=1: PAPS_reduct\tK00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]" } ] }, { "name":"00240 Pyrimidine metabolism [PATH:gms00240]", "children":[ { "name":"SOIL9_22530 carbamoyl phosphate synthase large subunit : Carbamoyl-phosphate synthase (glutamine-hydrolyzing) OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1525 PE=3 SV=1: CPSase_L_chain: CPSase_L_D2: CPSase_L_D3: CPSase_L_chain: CPSase_L_D2: MGS\tK01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]" }, { "name":"SOIL9_68170 carbamoyl phosphate synthase small subunit : Carbamoyl-phosphate synthase small chain OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=carA PE=3 SV=1: CPSase_sm_chain: GATase\tK01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]" }, { "name":"SOIL9_85290 aspartate carbamoyltransferase : Aspartate carbamoyltransferase OS=Planctomyces maris DSM 8797 GN=pyrB PE=3 SV=1: OTCace_N: OTCace\tK00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]" }, { "name":"SOIL9_85320 dihydroorotase : Dihydroorotase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=pyrC PE=3 SV=1: Amidohydro_4\tK01465 URA4; dihydroorotase [EC:3.5.2.3]" }, { "name":"SOIL9_64380 dihydroorotate dehydrogenase family protein : Dihydroorotate dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=pyrD PE=3 SV=1: DHO_dh\tK17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]" }, { "name":"SOIL9_39010 oxidoreductase fad nad -binding domain protein : Dihydroorotate dehydrogenase electron transfer subunit OS=Blastopirellula marina DSM 3645 GN=DSM3645_20317 PE=4 SV=1: FAD_binding_6: NAD_binding_1: DHODB_Fe-S_bind\tK02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit" }, { "name":"SOIL9_76380 orotate phosphoribosyltransferase : Orotate phosphoribosyltransferase OS=Planctomyces maris DSM 8797 GN=pyrE PE=3 SV=1: Pribosyltran\tK00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]" }, { "name":"SOIL9_74030 orotidine 5 -phosphate decarboxylase : Orotidine 5'-phosphate decarboxylase OS=Rhodopirellula baltica (strain SH1) GN=pyrF PE=3 SV=1: OMPdecase\tK01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]" }, { "name":"SOIL9_21400 uridylate kinase : Uridylate kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=pyrH PE=3 SV=1: AA_kinase\tK09903 pyrH; uridylate kinase [EC:2.7.4.22]" }, { "name":"SOIL9_72600 nucleoside diphosphate kinase : Nucleoside diphosphate kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ndk PE=3 SV=1: NDK\tK00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]" }, { "name":"SOIL9_67910 maf protein : Maf-like protein HGMM_F07G10C21 OS=uncultured planctomycete GN=HGMM_F07G10C21 PE=3 SV=1: Maf\tK06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]" }, { "name":"SOIL9_54050 ctp synthase : CTP synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=pyrG PE=3 SV=1: CTP_synth_N: GATase\tK01937 pyrG; CTP synthase [EC:6.3.4.2]" }, { "name":"SOIL9_29840 cytidylate kinase : Cytidylate kinase OS=Planctomyces maris DSM 8797 GN=cmk PE=3 SV=1: Cytidylate_kin\tK00945 cmk; CMP\/dCMP kinase [EC:2.7.4.25]" }, { "name":"SOIL9_06860 stationary phase survival protein : Stationary-phase survival protein SurE OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_0037 PE=4 SV=1: SurE\tK03787 surE; 5'\/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]" }, { "name":"SOIL9_23500 stationary phase survival protein : 5'-nucleotidase SurE OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=surE PE=3 SV=1: SurE\tK03787 surE; 5'\/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]" }, { "name":"SOIL9_80310 had-superfamily subfamily iia : Putative sugar phosphatase of HAD superfamily OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3472 PE=4 SV=1: Hydrolase_6: Hydrolase_like\tK02566 nagD; 5'-nucleotidase [EC:3.1.3.5]" }, { "name":"SOIL9_42400 uracil phosphoribosyltransferase : Uracil phosphoribosyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29364 \/ DSM 637 \/ Y-400-fl) GN=upp PE=3 SV=1: UPRTase\tK00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]" }, { "name":"SOIL9_70320 pseudouridine-5 -phosphate glycosidase : Pseudouridine-5'-phosphate glycosidase OS=Gluconacetobacter rhaeticus AF1 GN=psuG PE=3 SV=1: Indigoidine_A\tK16329 psuG; pseudouridylate synthase [EC:4.2.1.70]" }, { "name":"SOIL9_42420 pyrimidine-nucleoside phosphorylase : Pyrimidine-nucleoside phosphorylase OS=Myxococcus stipitatus (strain DSM 14675 \/ JCM 12634 \/ Mx s8) GN=MYSTI_06301 PE=4 SV=1: Glycos_trans_3N: Glycos_transf_3: PYNP_C\tK00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]" }, { "name":"SOIL9_42410 cytidine deaminase : Cytidine deaminase OS=Solibacter usitatus (strain Ellin6076) GN=Acid_5234 PE=4 SV=1: dCMP_cyt_deam_1\tK01489 cdd; cytidine deaminase [EC:3.5.4.5]" }, { "name":"SOIL9_40650 deoxycytidine triphosphate deaminase : Deoxycytidine triphosphate deaminase OS=Magnetospirillum magneticum (strain AMB-1 \/ ATCC 700264) GN=dcd PE=3 SV=1: dUTPase\tK01494 dcd; dCTP deaminase [EC:3.5.4.13]" }, { "name":"SOIL9_56590 deoxycytidine triphosphate deaminase : dCTP deaminase OS=Bradyrhizobium diazoefficiens (strain JCM 10833 \/ IAM 13628 \/ NBRC 14792 \/ USDA 110) GN=bll5009 PE=4 SV=1\tK01494 dcd; dCTP deaminase [EC:3.5.4.13]" }, { "name":"SOIL9_40630 ribonucleoside-diphosphate adenosylcobalamin-dependent : Ribonucleoside-diphosphate reductase subunit alpha OS=Melioribacter roseus (strain JCM 17771 \/ P3M-2) GN=MROS_2107 PE=4 SV=1: Ribonuc_red_2_N: Ribonuc_red_lgC: Ribonuc_red_lgC: TSCPD\tK00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]" }, { "name":"SOIL9_40860 ribonucleoside-diphosphate reductase : Ribonucleoside-diphosphate reductase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0900 PE=3 SV=1: ATP-cone: Ribonuc_red_lgN: Ribonuc_red_lgC\tK00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]" }, { "name":"SOIL9_40850 ribonucleoside-diphosphate reductase : Ribonucleoside-diphosphate reductase subunit beta OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0901 PE=3 SV=1: Ribonuc_red_sm\tK00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]" }, { "name":"SOIL9_17610 thymidylate kinase : Thymidylate kinase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=tmk PE=3 SV=1: Thymidylate_kin\tK00943 tmk; dTMP kinase [EC:2.7.4.9]" }, { "name":"SOIL9_72500 fad-dependent thymidylate synthase : Thymidylate synthase ThyX OS=Frankia symbiont subsp. Datisca glomerata GN=thyX PE=3 SV=1: Thy1\tK03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]" }, { "name":"SOIL9_61170 alpha beta hydrolase fold protein : Alpha\/beta hydrolase fold protein OS=Chondromyces apiculatus DSM 436 GN=CAP_1545 PE=4 SV=1: Abhydrolase_6\tK09023 rutD; aminoacrylate hydrolase [EC:3.5.1.-]" } ] } ] }, { "name":"09105 Amino acid metabolism", "children":[ { "name":"00250 Alanine, aspartate and glutamate metabolism [PATH:gms00250]", "children":[ { "name":"SOIL9_21630 aspartate aminotransferase : Aspartate aminotransferase OS=uncultured planctomycete GN=HGMM_F11G08C24 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_51030 aspartate aminotransferase : Aspartate\/tyrosine\/aromatic aminotransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3297 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_69580 aspartate aminotransferase : Aminotransferase, class I and II OS=Planctomyces maris DSM 8797 GN=PM8797T_14147 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_12040 l-aspartate oxidase : L-aspartate oxidase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6529 PE=4 SV=1: FAD_binding_2: Succ_DH_flav_C\tK00278 nadB; L-aspartate oxidase [EC:1.4.3.16]" }, { "name":"SOIL9_20890 asparagine synthase : Asparagine synthase OS=Rhodopirellula maiorica SM1 GN=RMSM_02412 PE=4 SV=1: Asn_synthase\tK01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]" }, { "name":"SOIL9_75980 asparagine synthase : Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1: GATase_7: Asn_synthase\tK01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]" }, { "name":"SOIL9_42310 alanine--glyoxylate aminotransferase : Aminotransferase, class V OS=Planctomyces maris DSM 8797 GN=PM8797T_18841 PE=3 SV=1: Aminotran_5\tK00830 AGXT; alanine-glyoxylate transaminase \/ serine-glyoxylate transaminase \/ serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]" }, { "name":"SOIL9_49740 alanine dehydrogenase : Alanine dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5112 PE=3 SV=1: AlaDh_PNT_N: AlaDh_PNT_C\tK00259 ald; alanine dehydrogenase [EC:1.4.1.1]" }, { "name":"SOIL9_53430 argininosuccinate synthase : Argininosuccinate synthase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2909 PE=4 SV=1: Arginosuc_synth\tK01940 argG; argininosuccinate synthase [EC:6.3.4.5]" }, { "name":"SOIL9_06360 argininosuccinate lyase : Argininosuccinate lyase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=argH PE=3 SV=1: Lyase_1: ASL_C2\tK01755 argH; argininosuccinate lyase [EC:4.3.2.1]" }, { "name":"SOIL9_40810 adenylosuccinate synthetase : Adenylosuccinate synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=purA PE=3 SV=1: Adenylsucc_synt\tK01939 purA; adenylosuccinate synthase [EC:6.3.4.4]" }, { "name":"SOIL9_34230 adenylosuccinate lyase : Adenylosuccinate lyase OS=uncultured planctomycete GN=HGMM_F33C03C06 PE=3 SV=1: Lyase_1: ADSL_C\tK01756 purB; adenylosuccinate lyase [EC:4.3.2.2]" }, { "name":"SOIL9_85290 aspartate carbamoyltransferase : Aspartate carbamoyltransferase OS=Planctomyces maris DSM 8797 GN=pyrB PE=3 SV=1: OTCace_N: OTCace\tK00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]" }, { "name":"SOIL9_82970 4-aminobutyrate aminotransferase : Acetylornithine aminotransferase OS=uncultured planctomycete GN=argD PE=3 SV=1: Aminotran_3\tK00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]" }, { "name":"SOIL9_27560 4-aminobutyrate aminotransferase : 4-aminobutyrate aminotransferase OS=Planctomyces maris DSM 8797 GN=PM8797T_18644 PE=3 SV=1: Aminotran_3\tK07250 gabT; 4-aminobutyrate aminotransferase \/ (S)-3-amino-2-methylpropionate transaminase \/ 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]" }, { "name":"SOIL9_29450 succinate-semialdehyde dehydrogenase : NAD-dependent aldehyde dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1922 PE=3 SV=1: Aldedh\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"SOIL9_28980 dihydropyrimidine dehydrogenase subunit a : Glutamate synthase (NADH) small subunit OS=Koribacter versatilis (strain Ellin345) GN=Acid345_3679 PE=4 SV=1: Fer4_20: Pyr_redox_2: Pyr_redox\tK00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]" }, { "name":"SOIL9_23100 glutamate dehydrogenase : Glutamate dehydrogenase OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD2095 PE=3 SV=1: ELFV_dehydrog_N: ELFV_dehydrog\tK00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]" }, { "name":"SOIL9_57740 1-pyrroline-5-carboxylate dehydrogenase : 1-pyrroline-5 carboxylate dehydrogenase OS=Planctomyces maris DSM 8797 GN=PM8797T_17322 PE=3 SV=1: Pro_dh: Aldedh\tK13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor \/ proline dehydrogenase \/ delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]" }, { "name":"SOIL9_63500 glutamine synthetase : Glutamine synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4895 PE=3 SV=1: GSIII_N: Gln-synt_C\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"SOIL9_75110 glutamine synthetase : Glutamine synthetase OS=Blastopirellula marina DSM 3645 GN=DSM3645_13233 PE=3 SV=1: Gln-synt_N: Gln-synt_C\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"SOIL9_22530 carbamoyl phosphate synthase large subunit : Carbamoyl-phosphate synthase (glutamine-hydrolyzing) OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1525 PE=3 SV=1: CPSase_L_chain: CPSase_L_D2: CPSase_L_D3: CPSase_L_chain: CPSase_L_D2: MGS\tK01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]" }, { "name":"SOIL9_68170 carbamoyl phosphate synthase small subunit : Carbamoyl-phosphate synthase small chain OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=carA PE=3 SV=1: CPSase_sm_chain: GATase\tK01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]" }, { "name":"SOIL9_22380 phosphoribosylformylglycinamidine synthase i : Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1060 PE=3 SV=1: GATase_5\tK23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ \/ glutaminase [EC:6.3.5.3 3.5.1.2]" }, { "name":"SOIL9_20360 glutamine amidotransferase : Glutamine--fructose-6-phosphate aminotransferase [isomerizing] OS=uncultured planctomycete GN=glmS PE=3 SV=1: GATase_6: SIS: SIS\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]" }, { "name":"SOIL9_83120 glutamine amidotransferase : Glutamine--fructose-6-phosphate aminotransferase [isomerizing] OS=uncultured planctomycete GN=glmS PE=3 SV=1: GATase_6: SIS: SIS\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]" }, { "name":"SOIL9_80440 amidophosphoribosyltransferase : Amidophosphoribosyltransferase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2159 PE=3 SV=1: GATase_6: Pribosyltran\tK00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]" } ] }, { "name":"00260 Glycine, serine and threonine metabolism [PATH:gms00260]", "children":[ { "name":"SOIL9_30270 aspartate kinase : Aspartokinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5942 PE=3 SV=1: AA_kinase: ACT: ACT_7: ACT\tK00928 lysC; aspartate kinase [EC:2.7.2.4]" }, { "name":"SOIL9_59370 aspartate-semialdehyde dehydrogenase : Aspartate-semialdehyde dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=asd PE=3 SV=1: Semialdhyde_dh: Semialdhyde_dhC\tK00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]" }, { "name":"SOIL9_67150 homoserine dehydrogenase : Homoserine dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5944 PE=3 SV=1: NAD_binding_3: Homoserine_dh: ACT\tK00003 hom; homoserine dehydrogenase [EC:1.1.1.3]" }, { "name":"SOIL9_03030 threonine synthase : Threonine synthase domain protein OS=Rhodopirellula maiorica SM1 GN=RMSM_03648 PE=4 SV=1: PALP\tK01733 thrC; threonine synthase [EC:4.2.3.1]" }, { "name":"SOIL9_38150 threonine synthase : Threonine synthase OS=Candidatus Entotheonella sp. TSY1 GN=ETSY1_27390 PE=4 SV=1: PALP\tK01733 thrC; threonine synthase [EC:4.2.3.1]" }, { "name":"SOIL9_50800 threonine synthase : Threonine synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6665 PE=4 SV=1: PALP\tK01733 thrC; threonine synthase [EC:4.2.3.1]" }, { "name":"SOIL9_46480 threonine aldolase : L-threonine aldolase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_3601 PE=4 SV=1: Beta_elim_lyase\tK01620 ltaE; threonine aldolase [EC:4.1.2.48]" }, { "name":"SOIL9_10300 serine hydroxymethyltransferase : Serine hydroxymethyltransferase OS=Blastopirellula marina DSM 3645 GN=glyA PE=3 SV=1: SHMT\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" }, { "name":"SOIL9_42310 alanine--glyoxylate aminotransferase : Aminotransferase, class V OS=Planctomyces maris DSM 8797 GN=PM8797T_18841 PE=3 SV=1: Aminotran_5\tK00830 AGXT; alanine-glyoxylate transaminase \/ serine-glyoxylate transaminase \/ serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]" }, { "name":"SOIL9_18080 glycerate kinase : Putative uncharacterized protein OS=uncultured Desulfobacterium sp. GN=N47_E46250 PE=4 SV=1: DUF4147: MOFRL\tK11529 gck; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"SOIL9_41790 phosphoglycerate mutase : Fructose-2,6-bisphosphatase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1498 PE=4 SV=1: His_Phos_1\tK15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]" }, { "name":"SOIL9_54780 phosphoglycerate mutase : Phosphoglycerate mutase OS=uncultured planctomycete GN=HGMM_F48A06C17 PE=4 SV=1: Metalloenzyme: PhosphMutase\tK15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]" }, { "name":"SOIL9_73600 phosphoglycerate mutase : Putative homoserine kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5943 PE=4 SV=1: Metalloenzyme: PhosphMutase\tK15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]" }, { "name":"SOIL9_03290 d-3-phosphoglycerate dehydrogenase : D-3-phosphoglycerate dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6245 PE=3 SV=1: 2-Hacid_dh: 2-Hacid_dh_C\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"SOIL9_06550 phosphoglycerate dehydrogenase : Lactate dehydrogenase-like oxidoreductase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3563 PE=3 SV=1: 2-Hacid_dh: 2-Hacid_dh_C\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"SOIL9_62790 2-amino-3-ketobutyrate ligase : 2-amino-3-ketobutyrate coenzyme A ligase OS=Microscilla marina ATCC 23134 GN=M23134_03502 PE=3 SV=1: Aminotran_1_2\tK00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]" }, { "name":"SOIL9_62110 tyramine oxidase : Tyramine oxidase OS=Tolypothrix bouteillei VB521301 GN=tynA PE=4 SV=1: Cu_amine_oxidN2: Cu_amine_oxidN3: Cu_amine_oxid\tK00276 AOC3; primary-amine oxidase [EC:1.4.3.21]" }, { "name":"SOIL9_53380 glycine dehydrogenase subunit 1 : Probable glycine dehydrogenase (decarboxylating) subunit 1 OS=Blastopirellula marina DSM 3645 GN=gcvPA PE=3 SV=1: GDC-P\tK00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]" }, { "name":"SOIL9_53360 glycine dehydrogenase subunit 2 : Probable glycine dehydrogenase (decarboxylating) subunit 2 OS=uncultured planctomycete GN=gcvPB PE=3 SV=1: GDC-P\tK00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]" }, { "name":"SOIL9_53400 glycine cleavage system t protein : Aminomethyltransferase OS=Planctomyces maris DSM 8797 GN=gcvT PE=3 SV=1: GCV_T: GCV_T_C\tK00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]" }, { "name":"SOIL9_55200 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4534 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_74420 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6538 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_29290 Glycine cleavage H-protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4504 PE=4 SV=1: GCV_H\tK02437 gcvH; glycine cleavage system H protein" }, { "name":"SOIL9_53390 glycine cleavage system protein h : Glycine cleavage system H protein OS=Planctomyces maris DSM 8797 GN=gcvH PE=3 SV=1: GCV_H\tK02437 gcvH; glycine cleavage system H protein" }, { "name":"SOIL9_31800 methyltryptophan oxidase : Monomeric sarcosine oxidase OS=Streptomyces sp. (strain KB210-8SY) GN=soxA PE=1 SV=2: DAO\tK00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1]" }, { "name":"SOIL9_00760 cystathionine beta-synthase : Cystathionine beta-synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7195 PE=4 SV=1: PALP: CBS\tK01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]" }, { "name":"SOIL9_23980 cystathionine beta-synthase : Pyridoxal-5'-phosphate-dependent enzyme, beta subunit OS=Plesiocystis pacifica SIR-1 GN=PPSIR1_00752 PE=4 SV=1: PALP\tK01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]" }, { "name":"SOIL9_56280 cystathionine beta-lyase : Cystathionine beta-lyase\/cystathionine gamma-synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7194 PE=3 SV=1: Cys_Met_Meta_PP\tK01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]" }, { "name":"SOIL9_44950 threonine dehydratase : Threonine ammonia-lyase, biosynthetic, long form OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1009 PE=4 SV=1: PALP: Thr_dehydrat_C: Thr_dehydrat_C\tK01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]" }, { "name":"SOIL9_64570 tryptophan synthase subunit alpha : Tryptophan synthase alpha chain OS=Blastopirellula marina DSM 3645 GN=trpA PE=3 SV=1: Trp_syntA\tK01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]" }, { "name":"SOIL9_73220 tryptophan synthase subunit beta : Tryptophan synthase beta chain OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=trpB PE=3 SV=1: PALP\tK01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]" }, { "name":"SOIL9_12590 deacylase : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_16468 PE=4 SV=1: AstE_AspA\tK15784 doeB; N2-acetyl-L-2,4-diaminobutanoate deacetylase [EC:3.5.1.125]" } ] }, { "name":"00270 Cysteine and methionine metabolism [PATH:gms00270]", "children":[ { "name":"SOIL9_13760 serine o-acetyltransferase : Serine acetyltransferase OS=Chondromyces apiculatus DSM 436 GN=CAP_8914 PE=3 SV=1: Hexapep\tK00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]" }, { "name":"SOIL9_71120 serine o-acetyltransferase : Serine acetyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6197 PE=4 SV=1: Hexapep: Hexapep_2\tK00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]" }, { "name":"SOIL9_40400 cysteine synthase : Cysteine synthase A OS=Rhodopirellula maiorica SM1 GN=RMSM_00239 PE=4 SV=1: PALP\tK01738 cysK; cysteine synthase [EC:2.5.1.47]" }, { "name":"SOIL9_70840 cysteine synthase : Cysteine synthase A OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2591 PE=4 SV=1: PALP\tK01738 cysK; cysteine synthase [EC:2.5.1.47]" }, { "name":"SOIL9_74610 cysteine synthase : Cysteine synthase OS=Cystobacter violaceus Cb vi76 GN=Q664_19850 PE=4 SV=1: PALP\tK01738 cysK; cysteine synthase [EC:2.5.1.47]" }, { "name":"SOIL9_56280 cystathionine beta-lyase : Cystathionine beta-lyase\/cystathionine gamma-synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7194 PE=3 SV=1: Cys_Met_Meta_PP\tK01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]" }, { "name":"SOIL9_00760 cystathionine beta-synthase : Cystathionine beta-synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7195 PE=4 SV=1: PALP: CBS\tK01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]" }, { "name":"SOIL9_23980 cystathionine beta-synthase : Pyridoxal-5'-phosphate-dependent enzyme, beta subunit OS=Plesiocystis pacifica SIR-1 GN=PPSIR1_00752 PE=4 SV=1: PALP\tK01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]" }, { "name":"SOIL9_75080 methionine synthase : Methionine synthase OS=Gloeobacter kilaueensis JS1 GN=metH PE=4 SV=1: S-methyl_trans: Pterin_bind: B12-binding_2: B12-binding: Met_synt_B12\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SOIL9_24120 s-adenosylmethionine synthetase : S-adenosylmethionine synthase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=metK PE=3 SV=1: S-AdoMet_synt_N: S-AdoMet_synt_M: S-AdoMet_synt_C\tK00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]" }, { "name":"SOIL9_34650 s-adenosyl-l-homocysteine hydrolase : Adenosylhomocysteinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ahcY PE=3 SV=1: AdoHcyase: AdoHcyase_NAD\tK01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]" }, { "name":"SOIL9_30270 aspartate kinase : Aspartokinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5942 PE=3 SV=1: AA_kinase: ACT: ACT_7: ACT\tK00928 lysC; aspartate kinase [EC:2.7.2.4]" }, { "name":"SOIL9_59370 aspartate-semialdehyde dehydrogenase : Aspartate-semialdehyde dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=asd PE=3 SV=1: Semialdhyde_dh: Semialdhyde_dhC\tK00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]" }, { "name":"SOIL9_67150 homoserine dehydrogenase : Homoserine dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5944 PE=3 SV=1: NAD_binding_3: Homoserine_dh: ACT\tK00003 hom; homoserine dehydrogenase [EC:1.1.1.3]" }, { "name":"SOIL9_54460 branched-chain amino acid aminotransferase : Branched chain amino acid aminotransferase apoenzyme OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_2136 PE=3 SV=1: Aminotran_4\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"SOIL9_68000 branched-chain amino acid aminotransferase : Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase \/ branched chain amino acid aminotransferase OS=Rhodospirillum photometricum DSM 122 GN=RSPPHO_02087 PE=3 SV=1: Aminotran_4\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"SOIL9_11350 glutamate--cysteine ligase : Uncharacterized protein OS=Sorangium cellulosum So0157-2 GN=SCE1572_35165 PE=4 SV=1: GCS2\tK01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2]" }, { "name":"SOIL9_21630 aspartate aminotransferase : Aspartate aminotransferase OS=uncultured planctomycete GN=HGMM_F11G08C24 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_51030 aspartate aminotransferase : Aspartate\/tyrosine\/aromatic aminotransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3297 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_69580 aspartate aminotransferase : Aminotransferase, class I and II OS=Planctomyces maris DSM 8797 GN=PM8797T_14147 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_08790 l-lactate dehydrogenase : L-lactate dehydrogenase OS=Caldilinea aerophila (strain DSM 14535 \/ JCM 11387 \/ NBRC 104270 \/ STL-6-O1) GN=ldh PE=3 SV=1: Ldh_1_N: Ldh_1_C\tK00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]" }, { "name":"SOIL9_47510 thiosulfate sulfurtransferase : Sulfurtransferase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2817 PE=4 SV=1: Rhodanese: Rhodanese\tK01011 TST; thiosulfate\/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]" }, { "name":"SOIL9_82380 Marine sediment metagenome DNA, contig: S01H1_S18985 (Fragment) OS=marine sediment metagenome GN=S01H1_52237 PE=4 SV=1: Rhodanese: Rhodanese\tK01011 TST; thiosulfate\/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]" }, { "name":"SOIL9_11650 malate dehydrogenase : Malate dehydrogenase OS=Leptospira borgpetersenii str. UI 09149 GN=mdh PE=3 SV=1: Ldh_1_N: Ldh_1_C\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]" }, { "name":"SOIL9_30630 cytochrome c biogenesis protein : 1-aminocyclopropane-1-carboxylate deaminase OS=Thermomicrobium roseum (strain ATCC 27502 \/ DSM 5159 \/ P-2) GN=trd_1612 PE=4 SV=1: PALP\tK17950 cuyA; L-cysteate sulfo-lyase [EC:4.4.1.25]" }, { "name":"SOIL9_03290 d-3-phosphoglycerate dehydrogenase : D-3-phosphoglycerate dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6245 PE=3 SV=1: 2-Hacid_dh: 2-Hacid_dh_C\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"SOIL9_06550 phosphoglycerate dehydrogenase : Lactate dehydrogenase-like oxidoreductase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3563 PE=3 SV=1: 2-Hacid_dh: 2-Hacid_dh_C\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" } ] }, { "name":"00280 Valine, leucine and isoleucine degradation [PATH:gms00280]", "children":[ { "name":"SOIL9_54460 branched-chain amino acid aminotransferase : Branched chain amino acid aminotransferase apoenzyme OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_2136 PE=3 SV=1: Aminotran_4\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"SOIL9_68000 branched-chain amino acid aminotransferase : Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase \/ branched chain amino acid aminotransferase OS=Rhodospirillum photometricum DSM 122 GN=RSPPHO_02087 PE=3 SV=1: Aminotran_4\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"SOIL9_79190 3-methyl-2-oxobutanoate dehydrogenase : Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1: E1_dh\tK00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]" }, { "name":"SOIL9_79200 3-methyl-2-oxobutanoate dehydrogenase : Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1: Transket_pyr: Transketolase_C\tK00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]" }, { "name":"SOIL9_79580 dehydrogenase e1 component : 2-oxoisovalerate dehydrogenase E1 OS=Mesorhizobium sp. LSJC280B00 GN=X772_08145 PE=4 SV=1: E1_dh: Transket_pyr: Transketolase_C\tK11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]" }, { "name":"SOIL9_79210 branched-chain alpha-keto acid dehydrogenase subunit e2 : Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1: Biotin_lipoyl: E3_binding: 2-oxoacid_dh\tK09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]" }, { "name":"SOIL9_55200 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4534 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_74420 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6538 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_59540 betaine-aldehyde dehydrogenase : Aldehyde dehydrogenase (Acceptor) OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_2599 PE=3 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_82990 aldehyde dehydrogenase : Aldehyde dehydrogenase OS=uncultured planctomycete GN=HGMM_F16E03C18 PE=4 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_27560 4-aminobutyrate aminotransferase : 4-aminobutyrate aminotransferase OS=Planctomyces maris DSM 8797 GN=PM8797T_18644 PE=3 SV=1: Aminotran_3\tK07250 gabT; 4-aminobutyrate aminotransferase \/ (S)-3-amino-2-methylpropionate transaminase \/ 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]" }, { "name":"SOIL9_28190 methylcrotonoyl-carboxylase : Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6119 PE=4 SV=1: Carboxyl_trans\tK01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]" }, { "name":"SOIL9_58970 enoyl-hydratase : Enoyl-CoA hydratase\/isomerase OS=Caldithrix abyssi DSM 13497 GN=Calab_3476 PE=3 SV=1: ECH\tK13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]" }, { "name":"SOIL9_50660 acetyl-acetyltransferase : Acetyl-CoA acetyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6120 PE=3 SV=1: Thiolase_N: Thiolase_C\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" } ] }, { "name":"00290 Valine, leucine and isoleucine biosynthesis [PATH:gms00290]", "children":[ { "name":"SOIL9_44950 threonine dehydratase : Threonine ammonia-lyase, biosynthetic, long form OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1009 PE=4 SV=1: PALP: Thr_dehydrat_C: Thr_dehydrat_C\tK01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]" }, { "name":"SOIL9_82220 homoaconitate hydratase family protein : 3-isopropylmalate dehydratase OS=Nitrospina gracilis (strain 3\/211) GN=IIL PE=4 SV=1: Aconitase: Aconitase\tK01703 leuC; 3-isopropylmalate\/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]" }, { "name":"SOIL9_71840 3-isopropylmalate dehydratase small subunit : 3-isopropylmalate\/(R)-2-methylmalate dehydratase small subunit OS=uncultured planctomycete GN=HGMM_F12C05C17 PE=4 SV=1: Aconitase_C\tK01704 leuD; 3-isopropylmalate\/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]" }, { "name":"SOIL9_38330 acetolactate synthase : Uncharacterized protein OS=uncultured bacterium GN=ACD_32C00113G0025 PE=3 SV=1: TPP_enzyme_N: TPP_enzyme_M: TPP_enzyme_C\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SOIL9_62530 acetolactate synthase : Acetolactate synthase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0933 PE=3 SV=1: TPP_enzyme_N: TPP_enzyme_M: TPP_enzyme_C\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SOIL9_82560 thiamine pyrophosphate n-terminal tpp binding domain protein : Thiamine pyrophosphate central domain-containing protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2596 PE=3 SV=1: TPP_enzyme_N: TPP_enzyme_M: TPP_enzyme_C\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SOIL9_82260 acetolactate synthase small subunit : Acetolactate synthase, small subunit OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4688 PE=4 SV=1: ACT: ALS_ss_C\tK01653 E2.2.1.6S; acetolactate synthase I\/III small subunit [EC:2.2.1.6]" }, { "name":"SOIL9_27260 ketol-acid reductoisomerase : Ketol-acid reductoisomerase OS=Fulvivirga imtechensis AK7 GN=C900_01877 PE=4 SV=1: IlvN: IlvC\tK00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]" }, { "name":"SOIL9_32440 dihydroxy-acid dehydratase : Dihydroxy-acid dehydratase OS=Chthonomonas calidirosea (strain DSM 23976 \/ ICMP 18418 \/ T49) GN=ilvD PE=3 SV=1: ILVD_EDD\tK01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]" }, { "name":"SOIL9_54460 branched-chain amino acid aminotransferase : Branched chain amino acid aminotransferase apoenzyme OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_2136 PE=3 SV=1: Aminotran_4\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"SOIL9_68000 branched-chain amino acid aminotransferase : Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase \/ branched chain amino acid aminotransferase OS=Rhodospirillum photometricum DSM 122 GN=RSPPHO_02087 PE=3 SV=1: Aminotran_4\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"SOIL9_12020 2-isopropylmalate synthase : 2-isopropylmalate synthase\/homocitrate synthase family protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2070 PE=3 SV=1: HMGL-like: LeuA_dimer\tK01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]" }, { "name":"SOIL9_33480 2-isopropylmalate synthase : 2-isopropylmalate synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=leuA PE=3 SV=1: HMGL-like: LeuA_dimer\tK01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]" } ] }, { "name":"00300 Lysine biosynthesis [PATH:gms00300]", "children":[ { "name":"SOIL9_67150 homoserine dehydrogenase : Homoserine dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5944 PE=3 SV=1: NAD_binding_3: Homoserine_dh: ACT\tK00003 hom; homoserine dehydrogenase [EC:1.1.1.3]" }, { "name":"SOIL9_30270 aspartate kinase : Aspartokinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5942 PE=3 SV=1: AA_kinase: ACT: ACT_7: ACT\tK00928 lysC; aspartate kinase [EC:2.7.2.4]" }, { "name":"SOIL9_59370 aspartate-semialdehyde dehydrogenase : Aspartate-semialdehyde dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=asd PE=3 SV=1: Semialdhyde_dh: Semialdhyde_dhC\tK00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]" }, { "name":"SOIL9_10780 dihydrodipicolinate synthase : Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_14925 PE=3 SV=1: DHDPS\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"SOIL9_54760 dihydrodipicolinate synthase : 4-hydroxy-tetrahydrodipicolinate synthase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=dapA PE=3 SV=1: DHDPS\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"SOIL9_03010 dihydrodipicolinate reductase : 4-hydroxy-tetrahydrodipicolinate reductase OS=Planctomyces maris DSM 8797 GN=dapB PE=3 SV=1: DapB_N: DapB_C\tK00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]" }, { "name":"SOIL9_21890 acetylornithine aminotransferase : Acetylornithine aminotransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=argD PE=3 SV=1: Aminotran_3\tK00821 argD; acetylornithine\/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]" }, { "name":"SOIL9_28600 diaminopimelate epimerase : Diaminopimelate epimerase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=dapF PE=3 SV=1: DAP_epimerase: DAP_epimerase\tK01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]" }, { "name":"SOIL9_66820 aspartate aminotransferase : Aspartate aminotransferase OS=Rhodopirellula maiorica SM1 GN=RMSM_00332 PE=4 SV=1: Aminotran_1_2\tK10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]" }, { "name":"SOIL9_04340 diaminopimelate decarboxylase : Diaminopimelate decarboxylase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=lysA PE=3 SV=1: Orn_Arg_deC_N: Orn_DAP_Arg_deC\tK01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]" }, { "name":"SOIL9_65050 family transcriptional regulator : Transcriptional regulator with HTH domain and aminotransferase domain OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2242 PE=4 SV=1: Aminotran_1_2\tK05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]" } ] }, { "name":"00310 Lysine degradation [PATH:gms00310]", "children":[ { "name":"SOIL9_74410 dihydrolipoamide succinyltransferase : Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6537 PE=3 SV=1: Biotin_lipoyl: E3_binding: 2-oxoacid_dh\tK00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]" }, { "name":"SOIL9_55200 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4534 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_74420 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6538 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_50660 acetyl-acetyltransferase : Acetyl-CoA acetyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6120 PE=3 SV=1: Thiolase_N: Thiolase_C\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SOIL9_27560 4-aminobutyrate aminotransferase : 4-aminobutyrate aminotransferase OS=Planctomyces maris DSM 8797 GN=PM8797T_18644 PE=3 SV=1: Aminotran_3\tK07250 gabT; 4-aminobutyrate aminotransferase \/ (S)-3-amino-2-methylpropionate transaminase \/ 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]" }, { "name":"SOIL9_29450 succinate-semialdehyde dehydrogenase : NAD-dependent aldehyde dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1922 PE=3 SV=1: Aldedh\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"SOIL9_22460 hydroxyglutarate oxidase : Hydroxyglutarate oxidase OS=Candidatus Entotheonella sp. TSY2 GN=ETSY2_39025 PE=4 SV=1: DAO\tK15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]" }, { "name":"SOIL9_21140 lysine -aminomutase : KamA family protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6204 PE=4 SV=1: Radical_SAM: LAM_C\tK01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]" }, { "name":"SOIL9_59540 betaine-aldehyde dehydrogenase : Aldehyde dehydrogenase (Acceptor) OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_2599 PE=3 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_82990 aldehyde dehydrogenase : Aldehyde dehydrogenase OS=uncultured planctomycete GN=HGMM_F16E03C18 PE=4 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" } ] }, { "name":"00220 Arginine biosynthesis [PATH:gms00220]", "children":[ { "name":"SOIL9_21900 ornithine carbamoyltransferase : Ornithine carbamoyltransferase OS=Rhodopirellula sp. SWK7 GN=RRSWK_05436 PE=3 SV=1: OTCace_N: OTCace\tK00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]" }, { "name":"SOIL9_53430 argininosuccinate synthase : Argininosuccinate synthase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2909 PE=4 SV=1: Arginosuc_synth\tK01940 argG; argininosuccinate synthase [EC:6.3.4.5]" }, { "name":"SOIL9_06360 argininosuccinate lyase : Argininosuccinate lyase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=argH PE=3 SV=1: Lyase_1: ASL_C2\tK01755 argH; argininosuccinate lyase [EC:4.3.2.1]" }, { "name":"SOIL9_62010 amidinotransferase : N-dimethylarginine dimethylaminohydrolase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5338 PE=4 SV=1: Amidinotransf\tK27545 argZ; arginine dihydrolase [EC:3.5.3.27]" }, { "name":"SOIL9_22380 phosphoribosylformylglycinamidine synthase i : Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1060 PE=3 SV=1: GATase_5\tK23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ \/ glutaminase [EC:6.3.5.3 3.5.1.2]" }, { "name":"SOIL9_63500 glutamine synthetase : Glutamine synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4895 PE=3 SV=1: GSIII_N: Gln-synt_C\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"SOIL9_75110 glutamine synthetase : Glutamine synthetase OS=Blastopirellula marina DSM 3645 GN=DSM3645_13233 PE=3 SV=1: Gln-synt_N: Gln-synt_C\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"SOIL9_22530 carbamoyl phosphate synthase large subunit : Carbamoyl-phosphate synthase (glutamine-hydrolyzing) OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1525 PE=3 SV=1: CPSase_L_chain: CPSase_L_D2: CPSase_L_D3: CPSase_L_chain: CPSase_L_D2: MGS\tK01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]" }, { "name":"SOIL9_68170 carbamoyl phosphate synthase small subunit : Carbamoyl-phosphate synthase small chain OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=carA PE=3 SV=1: CPSase_sm_chain: GATase\tK01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]" }, { "name":"SOIL9_23100 glutamate dehydrogenase : Glutamate dehydrogenase OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD2095 PE=3 SV=1: ELFV_dehydrog_N: ELFV_dehydrog\tK00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]" }, { "name":"SOIL9_21630 aspartate aminotransferase : Aspartate aminotransferase OS=uncultured planctomycete GN=HGMM_F11G08C24 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_51030 aspartate aminotransferase : Aspartate\/tyrosine\/aromatic aminotransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3297 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_69580 aspartate aminotransferase : Aminotransferase, class I and II OS=Planctomyces maris DSM 8797 GN=PM8797T_14147 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_82900 n-acetylglutamate synthase : Amino-acid N-acetyltransferase OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD4494 PE=3 SV=1: AA_kinase: Acetyltransf_1\tK14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]" }, { "name":"SOIL9_38080 arginine biosynthesis bifunctional protein : Arginine biosynthesis bifunctional protein ArgJ OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=argJ PE=3 SV=1: ArgJ\tK00620 argJ; glutamate N-acetyltransferase \/ amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]" }, { "name":"SOIL9_12200 gcn5 family acetyltransferase : GCN5-related N-acetyltransferase OS=bacterium UASB270 GN=U27_00640 PE=4 SV=1: Acetyltransf_1\tK22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]" }, { "name":"SOIL9_21880 acetylglutamate kinase : Acetylglutamate kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=argB PE=3 SV=1: AA_kinase\tK00930 argB; acetylglutamate kinase [EC:2.7.2.8]" }, { "name":"SOIL9_08490 n-acetyl-gamma-glutamyl-phosphate reductase : N-acetyl-gamma-glutamyl-phosphate reductase OS=Planctomyces maris DSM 8797 GN=argC PE=3 SV=1: Semialdhyde_dh: Semialdhyde_dhC\tK00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]" }, { "name":"SOIL9_21890 acetylornithine aminotransferase : Acetylornithine aminotransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=argD PE=3 SV=1: Aminotran_3\tK00821 argD; acetylornithine\/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]" } ] }, { "name":"00330 Arginine and proline metabolism [PATH:gms00330]", "children":[ { "name":"SOIL9_12610 Creatininase OS=Sphaerobacter thermophilus (strain DSM 20745 \/ S 6022) GN=Sthe_2851 PE=4 SV=1: Creatininase\tK01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]" }, { "name":"SOIL9_52920 Creatininase OS=gamma proteobacterium NOR5-3 GN=NOR53_2354 PE=4 SV=1: Creatininase\tK01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]" }, { "name":"SOIL9_70730 Creatininase OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_3738 PE=4 SV=1: Creatininase\tK01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]" }, { "name":"SOIL9_70770 arginine decarboxylase : Biosynthetic arginine decarboxylase OS=Solibacter usitatus (strain Ellin6076) GN=speA PE=3 SV=1: Orn_Arg_deC_N: Orn_DAP_Arg_deC\tK01585 speA; arginine decarboxylase [EC:4.1.1.19]" }, { "name":"SOIL9_54860 agmatinase : Agmatinase OS=Desulfurococcus fermentans DSM 16532 GN=Desfe_0153 PE=3 SV=1: Arginase\tK01480 speB; agmatinase [EC:3.5.3.11]" }, { "name":"SOIL9_51220 agmatine deiminase : Agmatine deiminase OS=Terriglobus saanensis (strain ATCC BAA-1853 \/ DSM 23119 \/ SP1PR4) GN=AciPR4_1790 PE=4 SV=1: PAD_porph\tK10536 aguA; agmatine deiminase [EC:3.5.3.12]" }, { "name":"SOIL9_03110 amidohydrolase : Putative amidohydrolase OS=Arcticibacter svalbardensis MN12-7 GN=ADIARSV_1439 PE=4 SV=1: CN_hydrolase\tK12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]" }, { "name":"SOIL9_38690 apolipoprotein acyltransferase : Putative amidohydrolase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3542 PE=4 SV=1: CN_hydrolase\tK12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]" }, { "name":"SOIL9_59540 betaine-aldehyde dehydrogenase : Aldehyde dehydrogenase (Acceptor) OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_2599 PE=3 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_82990 aldehyde dehydrogenase : Aldehyde dehydrogenase OS=uncultured planctomycete GN=HGMM_F16E03C18 PE=4 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_62010 amidinotransferase : N-dimethylarginine dimethylaminohydrolase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5338 PE=4 SV=1: Amidinotransf\tK27545 argZ; arginine dihydrolase [EC:3.5.3.27]" }, { "name":"SOIL9_00610 pyrroline-5-carboxylate reductase : Pyrroline-5-carboxylate reductase OS=Acanthamoeba castellanii str. Neff GN=ACA1_116930 PE=3 SV=1: F420_oxidored: P5CR_dimer\tK00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]" }, { "name":"SOIL9_57740 1-pyrroline-5-carboxylate dehydrogenase : 1-pyrroline-5 carboxylate dehydrogenase OS=Planctomyces maris DSM 8797 GN=PM8797T_17322 PE=3 SV=1: Pro_dh: Aldedh\tK13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor \/ proline dehydrogenase \/ delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]" }, { "name":"SOIL9_55930 Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_00277 PE=4 SV=1: Saccharop_dh_N\tK28013 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12]" }, { "name":"SOIL9_34290 glutamate 5-kinase : Glutamate 5-kinase OS=Planctomyces maris DSM 8797 GN=proB PE=3 SV=1: AA_kinase: PUA\tK00931 proB; glutamate 5-kinase [EC:2.7.2.11]" }, { "name":"SOIL9_34390 gamma-glutamyl phosphate reductase : Gamma-glutamyl phosphate reductase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=proA PE=3 SV=1: Aldedh\tK00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]" }, { "name":"SOIL9_21630 aspartate aminotransferase : Aspartate aminotransferase OS=uncultured planctomycete GN=HGMM_F11G08C24 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_51030 aspartate aminotransferase : Aspartate\/tyrosine\/aromatic aminotransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3297 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_69580 aspartate aminotransferase : Aminotransferase, class I and II OS=Planctomyces maris DSM 8797 GN=PM8797T_14147 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_51450 muconate-lactonizing protein : Mandelate racemase\/muconate lactonizing protein OS=Oceanibaculum indicum P24 GN=P24_05304 PE=4 SV=1: MR_MLE_N: MR_MLE: MR_MLE_C\tK21624 c3lhypd; cis-L-3-hydroxyproline dehydratase [EC:4.2.1.171]" } ] }, { "name":"00340 Histidine metabolism [PATH:gms00340]", "children":[ { "name":"SOIL9_59650 atp phosphoribosyltransferase : ATP phosphoribosyltransferase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=hisG PE=3 SV=1: HisG: HisG_C\tK00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]" }, { "name":"SOIL9_69480 phosphoribosyl-amp cyclohydrolase : Phosphoribosyl-AMP cyclohydrolase OS=uncultured planctomycete GN=hisI PE=3 SV=1: PRA-CH\tK01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]" }, { "name":"SOIL9_12230 histidine biosynthesis protein : HisA\/HisF family protein, putative OS=Planctomyces maris DSM 8797 GN=PM8797T_05275 PE=3 SV=1: His_biosynth\tK01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]" }, { "name":"SOIL9_29350 1-(5-phosphoribosyl)-5-: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS=Paenibacillus borealis GN=hisA PE=3 SV=1: His_biosynth\tK01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]" }, { "name":"SOIL9_37680 imidazole glycerol phosphate synthase : Imidazole glycerol phosphate synthase subunit HisH OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=hisH PE=3 SV=1: GATase\tK02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]" }, { "name":"SOIL9_11510 imidazoleglycerol phosphate cyclase subunit : Imidazole glycerol phosphate synthase subunit HisF OS=Blastopirellula marina DSM 3645 GN=hisF PE=3 SV=1: His_biosynth\tK02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]" }, { "name":"SOIL9_37550 imidazoleglycerol-phosphate dehydratase : Imidazoleglycerol-phosphate dehydratase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=hisB PE=3 SV=1: IGPD\tK01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]" }, { "name":"SOIL9_37540 histidinol-phosphate aminotransferase : Histidinol-phosphate aminotransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=hisC PE=3 SV=1: Aminotran_1_2\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"SOIL9_18540 histidinol-phosphate phosphatase : Histidinol-phosphate phosphatase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4004 PE=4 SV=1: Inositol_P\tK05602 hisN; histidinol-phosphatase [EC:3.1.3.15]" }, { "name":"SOIL9_37530 histidinol dehydrogenase : Histidinol dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=hisD PE=3 SV=1: Histidinol_dh\tK00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]" }, { "name":"SOIL9_83430 histidine ammonia-lyase : Histidine ammonia-lyase OS=Rhodothermus marinus SG0.5JP17-172 GN=Rhom172_1197 PE=3 SV=1: Lyase_aromatic\tK01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]" }, { "name":"SOIL9_53520 urocanate hydratase : Urocanate hydratase OS=Aeromonas media WS GN=hutU PE=3 SV=1: Urocanase\tK01712 hutU; urocanate hydratase [EC:4.2.1.49]" }, { "name":"SOIL9_53540 imidazolonepropionase : Imidazolonepropionase OS=Chromobacterium violaceum (strain ATCC 12472 \/ DSM 30191 \/ JCM 1249 \/ NBRC 12614 \/ NCIMB 9131 \/ NCTC 9757) GN=hutI PE=3 SV=1: Amidohydro_4\tK01468 hutI; imidazolonepropionase [EC:3.5.2.7]" }, { "name":"SOIL9_53530 formimidoylglutamase : Formimidoylglutamase OS=Pseudogulbenkiania ferrooxidans EGD-HP2 GN=hutG PE=3 SV=1: Arginase\tK01479 hutG; formiminoglutamase [EC:3.5.3.8]" }, { "name":"SOIL9_59540 betaine-aldehyde dehydrogenase : Aldehyde dehydrogenase (Acceptor) OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_2599 PE=3 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_82990 aldehyde dehydrogenase : Aldehyde dehydrogenase OS=uncultured planctomycete GN=HGMM_F16E03C18 PE=4 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_20670 Uncharacterized protein OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 \/ Py2) GN=Xaut_4562 PE=4 SV=1: Methyltransf_25: Methyltransf_33\tK18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]" }, { "name":"SOIL9_11350 glutamate--cysteine ligase : Uncharacterized protein OS=Sorangium cellulosum So0157-2 GN=SCE1572_35165 PE=4 SV=1: GCS2\tK01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2]" } ] }, { "name":"00350 Tyrosine metabolism [PATH:gms00350]", "children":[ { "name":"SOIL9_21630 aspartate aminotransferase : Aspartate aminotransferase OS=uncultured planctomycete GN=HGMM_F11G08C24 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_51030 aspartate aminotransferase : Aspartate\/tyrosine\/aromatic aminotransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3297 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_69580 aspartate aminotransferase : Aminotransferase, class I and II OS=Planctomyces maris DSM 8797 GN=PM8797T_14147 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_37540 histidinol-phosphate aminotransferase : Histidinol-phosphate aminotransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=hisC PE=3 SV=1: Aminotran_1_2\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"SOIL9_61740 4-hydroxyphenylpyruvate dioxygenase : 4-hydroxyphenylpyruvate dioxygenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1068 PE=3 SV=1: Glyoxalase: Glyoxalase\tK00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]" }, { "name":"SOIL9_61770 homogentisate -dioxygenase : Homogentisate 1,2-dioxygenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1066 PE=4 SV=1: HgmA\tK00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]" }, { "name":"SOIL9_16870 polyphenol oxidase : Tyrosinase, putative OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_B0356 PE=4 SV=1: Tyrosinase: Tyrosinase: PPO1_KFDV\tK00505 TYR; tyrosinase [EC:1.14.18.1]" }, { "name":"SOIL9_38750 amino acid decarboxylase : Aromatic-L-amino-acid decarboxylase OS=Solibacter usitatus (strain Ellin6076) GN=Acid_1182 PE=3 SV=1: Pyridoxal_deC\tK01593 DDC; aromatic-L-amino-acid\/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]" }, { "name":"SOIL9_62110 tyramine oxidase : Tyramine oxidase OS=Tolypothrix bouteillei VB521301 GN=tynA PE=4 SV=1: Cu_amine_oxidN2: Cu_amine_oxidN3: Cu_amine_oxid\tK00276 AOC3; primary-amine oxidase [EC:1.4.3.21]" }, { "name":"SOIL9_38310 acetoin dehydrogenase : Alcohol dehydrogenase superfamily, zinc-containing OS=Rhodopseudomonas palustris (strain HaA2) GN=RPB_3806 PE=3 SV=1: ADH_N: ADH_zinc_N\tK00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase \/ alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]" }, { "name":"SOIL9_66670 2-dehydro-3-deoxyglucarate aldolase : 4-hydroxy-2-oxovalerate aldolase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1054 PE=4 SV=1: HpcH_HpaI\tK02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]" }, { "name":"SOIL9_29450 succinate-semialdehyde dehydrogenase : NAD-dependent aldehyde dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1922 PE=3 SV=1: Aldedh\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" } ] }, { "name":"00360 Phenylalanine metabolism [PATH:gms00360]", "children":[ { "name":"SOIL9_38750 amino acid decarboxylase : Aromatic-L-amino-acid decarboxylase OS=Solibacter usitatus (strain Ellin6076) GN=Acid_1182 PE=3 SV=1: Pyridoxal_deC\tK01593 DDC; aromatic-L-amino-acid\/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]" }, { "name":"SOIL9_62110 tyramine oxidase : Tyramine oxidase OS=Tolypothrix bouteillei VB521301 GN=tynA PE=4 SV=1: Cu_amine_oxidN2: Cu_amine_oxidN3: Cu_amine_oxid\tK00276 AOC3; primary-amine oxidase [EC:1.4.3.21]" }, { "name":"SOIL9_29210 phenylacetate--ligase : Coenzyme F390 synthetase (FtsA-2) OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD1323 PE=4 SV=1: AMP-binding: AMP-binding_C_2\tK01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]" }, { "name":"SOIL9_21630 aspartate aminotransferase : Aspartate aminotransferase OS=uncultured planctomycete GN=HGMM_F11G08C24 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_51030 aspartate aminotransferase : Aspartate\/tyrosine\/aromatic aminotransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3297 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_69580 aspartate aminotransferase : Aminotransferase, class I and II OS=Planctomyces maris DSM 8797 GN=PM8797T_14147 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_37540 histidinol-phosphate aminotransferase : Histidinol-phosphate aminotransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=hisC PE=3 SV=1: Aminotran_1_2\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"SOIL9_61740 4-hydroxyphenylpyruvate dioxygenase : 4-hydroxyphenylpyruvate dioxygenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1068 PE=3 SV=1: Glyoxalase: Glyoxalase\tK00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]" }, { "name":"SOIL9_38710 d-amino acid dehydrogenase small subunit : FAD dependent oxidoreductase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1256 PE=4 SV=1: DAO\tK00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]" } ] }, { "name":"00380 Tryptophan metabolism [PATH:gms00380]", "children":[ { "name":"SOIL9_08590 tryptophan -dioxygenase : Tryptophan 2,3-dioxygenase OS=Gemmata sp. Wa1-1 GN=kynA PE=3 SV=1: Trp_dioxygenase: Trp_dioxygenase\tK00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]" }, { "name":"SOIL9_56680 kynurenine 3-monooxygenase : Kynurenine 3-monooxygenase OS=Gemmata sp. Wa1-1 PE=4 SV=1: FAD_binding_3\tK00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9]" }, { "name":"SOIL9_56670 kynureninase : Kynureninase OS=Nonlabens sediminis GN=kynU PE=3 SV=1: Aminotran_5\tK01556 KYNU; kynureninase [EC:3.7.1.3]" }, { "name":"SOIL9_56640 3-hydroxyanthranilate -dioxygenase : 3-hydroxyanthranilate 3,4 dioxygenase OS=Gemmata sp. Wa1-1 PE=4 SV=1: 3-HAO\tK00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6]" }, { "name":"SOIL9_56650 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase : 3-hydroxyanthranilate 3,4 dioxygenase OS=Gemmata sp. Wa1-1 PE=4 SV=1: Amidohydro_2\tK03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45]" }, { "name":"SOIL9_79350 2-hydroxymuconic semialdehyde dehydrogenase : 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase OS=Fulvivirga imtechensis AK7 GN=C900_03217 PE=3 SV=1: Aldedh\tK10217 dmpC; aminomuconate-semialdehyde\/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]" }, { "name":"SOIL9_56630 2-aminomuconate deaminase : 2-aminomuconate deaminase OS=Pontibacter sp. BAB1700 GN=O71_20332 PE=4 SV=1: Ribonuc_L-PSP\tK15067 amnD; 2-aminomuconate deaminase [EC:3.5.99.5]" }, { "name":"SOIL9_74410 dihydrolipoamide succinyltransferase : Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6537 PE=3 SV=1: Biotin_lipoyl: E3_binding: 2-oxoacid_dh\tK00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]" }, { "name":"SOIL9_55200 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4534 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_74420 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6538 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_50660 acetyl-acetyltransferase : Acetyl-CoA acetyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6120 PE=3 SV=1: Thiolase_N: Thiolase_C\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SOIL9_38750 amino acid decarboxylase : Aromatic-L-amino-acid decarboxylase OS=Solibacter usitatus (strain Ellin6076) GN=Acid_1182 PE=3 SV=1: Pyridoxal_deC\tK01593 DDC; aromatic-L-amino-acid\/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]" }, { "name":"SOIL9_59540 betaine-aldehyde dehydrogenase : Aldehyde dehydrogenase (Acceptor) OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_2599 PE=3 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_82990 aldehyde dehydrogenase : Aldehyde dehydrogenase OS=uncultured planctomycete GN=HGMM_F16E03C18 PE=4 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_79060 nitrilase : Nitrilase OS=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 GN=ABENE_22140 PE=4 SV=1: CN_hydrolase: ACT_7\tK01501 E3.5.5.1; nitrilase [EC:3.5.5.1]" }, { "name":"SOIL9_10180 catalase : Catalase-related peroxidase OS=Acidobacterium capsulatum (strain ATCC 51196 \/ DSM 11244 \/ JCM 7670) GN=ACP_1705 PE=3 SV=1: Catalase\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"SOIL9_10580 catalase : Catalase KatB OS=Corallococcus coralloides (strain ATCC 25202 \/ DSM 2259 \/ NBRC 100086 \/ M2) GN=katB PE=4 SV=1: Catalase: Catalase-rel\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"SOIL9_48460 catalase : Catalase OS=Rhodomicrobium vannielii (strain ATCC 17100 \/ ATH 3.1.1 \/ DSM 162 \/ LMG 4299) GN=Rvan_0122 PE=3 SV=1: Catalase: Catalase-rel\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"SOIL9_81230 catalase : Catalase OS=Rhodomicrobium vannielii (strain ATCC 17100 \/ ATH 3.1.1 \/ DSM 162 \/ LMG 4299) GN=Rvan_0122 PE=3 SV=1: Catalase: Catalase-rel\tK03781 katE; catalase [EC:1.11.1.6]" } ] }, { "name":"00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:gms00400]", "children":[ { "name":"SOIL9_45420 phospho-2-dehydro-3-deoxyheptonate aldolase : Phospho-2-dehydro-3-deoxyheptonate aldolase OS=Aquabacterium sp. NJ1 GN=JY96_12765 PE=4 SV=1: DAHP_synth_1\tK01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]" }, { "name":"SOIL9_59700 3-deoxy-7-phosphoheptulonate synthase : Phospho-2-dehydro-3-deoxyheptonate aldolase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1488 PE=4 SV=1: DAHP_synth_1\tK03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]" }, { "name":"SOIL9_70220 3-deoxy-7-phosphoheptulonate synthase : 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_3453 PE=4 SV=1: DAHP_synth_1\tK03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]" }, { "name":"SOIL9_06800 3-dehydroquinate synthase : 3-dehydroquinate synthase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=aroB PE=3 SV=1: DHQ_synthase\tK01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]" }, { "name":"SOIL9_37640 3-dehydroquinate dehydratase : Shikimate dehydrogenase (NADP(+)) OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4018 PE=3 SV=1: DHquinase_I: Shikimate_dh_N: Shikimate_DH\tK13832 aroDE; 3-dehydroquinate dehydratase \/ shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]" }, { "name":"SOIL9_37650 shikimate kinase : Marine sediment metagenome DNA, contig: S03H2_L00797 OS=marine sediment metagenome GN=S03H2_11483 PE=3 SV=1: SKI\tK00891 aroK; shikimate kinase [EC:2.7.1.71]" }, { "name":"SOIL9_59350 3-phosphoshikimate 1-carboxyvinyltransferase : 3-phosphoshikimate 1-carboxyvinyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=aroA PE=3 SV=1: EPSP_synthase\tK00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]" }, { "name":"SOIL9_46460 chorismate synthase : Chorismate synthase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=aroC PE=3 SV=1: Chorismate_synt\tK01736 aroC; chorismate synthase [EC:4.2.3.5]" }, { "name":"SOIL9_59570 anthranilate synthase component i : Anthranilate synthase component I OS=Planctomyces maris DSM 8797 GN=PM8797T_19864 PE=4 SV=1: Anth_synt_I_N: Chorismate_bind\tK01657 trpE; anthranilate synthase component I [EC:4.1.3.27]" }, { "name":"SOIL9_01750 anthranilate phosphoribosyltransferase : Anthranilate phosphoribosyltransferase OS=Clostridium clariflavum (strain DSM 19732 \/ NBRC 101661 \/ EBR45) GN=trpD PE=3 SV=1: Glycos_trans_3N: Glycos_transf_3\tK00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]" }, { "name":"SOIL9_18520 n-(5 -phosphoribosyl)anthranilate isomerase : N-(5'-phosphoribosyl)anthranilate isomerase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=trpF PE=3 SV=1: PRAI\tK01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]" }, { "name":"SOIL9_28580 indole-3-glycerol phosphate synthase : Indole-3-glycerol phosphate synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=trpC PE=3 SV=1: IGPS\tK01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]" }, { "name":"SOIL9_64570 tryptophan synthase subunit alpha : Tryptophan synthase alpha chain OS=Blastopirellula marina DSM 3645 GN=trpA PE=3 SV=1: Trp_syntA\tK01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]" }, { "name":"SOIL9_73220 tryptophan synthase subunit beta : Tryptophan synthase beta chain OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=trpB PE=3 SV=1: PALP\tK01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]" }, { "name":"SOIL9_59690 prephenate dehydratase : Prephenate dehydratase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1486 PE=4 SV=1: CM_2: PDT: ACT\tK14170 pheA; chorismate mutase \/ prephenate dehydratase [EC:5.4.99.5 4.2.1.51]" }, { "name":"SOIL9_21630 aspartate aminotransferase : Aspartate aminotransferase OS=uncultured planctomycete GN=HGMM_F11G08C24 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_51030 aspartate aminotransferase : Aspartate\/tyrosine\/aromatic aminotransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3297 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_69580 aspartate aminotransferase : Aminotransferase, class I and II OS=Planctomyces maris DSM 8797 GN=PM8797T_14147 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_37540 histidinol-phosphate aminotransferase : Histidinol-phosphate aminotransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=hisC PE=3 SV=1: Aminotran_1_2\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" } ] } ] }, { "name":"09106 Metabolism of other amino acids", "children":[ { "name":"00410 beta-Alanine metabolism [PATH:gms00410]", "children":[ { "name":"SOIL9_79230 aspartate decarboxylase : Aspartate 1-decarboxylase OS=uncultured bacterium GN=panD PE=3 SV=1: Asp_decarbox\tK01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]" }, { "name":"SOIL9_82970 4-aminobutyrate aminotransferase : Acetylornithine aminotransferase OS=uncultured planctomycete GN=argD PE=3 SV=1: Aminotran_3\tK00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]" }, { "name":"SOIL9_27560 4-aminobutyrate aminotransferase : 4-aminobutyrate aminotransferase OS=Planctomyces maris DSM 8797 GN=PM8797T_18644 PE=3 SV=1: Aminotran_3\tK07250 gabT; 4-aminobutyrate aminotransferase \/ (S)-3-amino-2-methylpropionate transaminase \/ 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]" }, { "name":"SOIL9_62110 tyramine oxidase : Tyramine oxidase OS=Tolypothrix bouteillei VB521301 GN=tynA PE=4 SV=1: Cu_amine_oxidN2: Cu_amine_oxidN3: Cu_amine_oxid\tK00276 AOC3; primary-amine oxidase [EC:1.4.3.21]" }, { "name":"SOIL9_59540 betaine-aldehyde dehydrogenase : Aldehyde dehydrogenase (Acceptor) OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_2599 PE=3 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_82990 aldehyde dehydrogenase : Aldehyde dehydrogenase OS=uncultured planctomycete GN=HGMM_F16E03C18 PE=4 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_56730 pantoate--beta-alanine ligase : Pantothenate synthetase OS=Thermotoga maritima (strain ATCC 43589 \/ MSB8 \/ DSM 3109 \/ JCM 10099) GN=panC PE=3 SV=1: Pantoate_ligase\tK01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]" } ] }, { "name":"00430 Taurine and hypotaurine metabolism [PATH:gms00430]", "children":[ { "name":"SOIL9_06720 gamma-glutamyltransferase : Gamma-glutamyltranspeptidase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2586 PE=4 SV=1: G_glu_transpept\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]" }, { "name":"SOIL9_32580 gamma-glutamyltranspeptidase : Gamma-glutamyltranspeptidase OS=Gemmatimonas aurantiaca (strain T-27 \/ DSM 14586 \/ JCM 11422 \/ NBRC 100505) GN=ggt PE=4 SV=1: G_glu_transpept\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]" }, { "name":"SOIL9_49740 alanine dehydrogenase : Alanine dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5112 PE=3 SV=1: AlaDh_PNT_N: AlaDh_PNT_C\tK00259 ald; alanine dehydrogenase [EC:1.4.1.1]" }, { "name":"SOIL9_07550 acetate kinase : Acetate kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ackA PE=3 SV=1: Acetate_kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]" } ] }, { "name":"00440 Phosphonate and phosphinate metabolism [PATH:gms00440]", "children":[ { "name":"SOIL9_67850 phosphonoacetaldehyde hydrolase : Phosphonoacetaldehyde hydrolase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3627 PE=3 SV=1: HAD_2\tK05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]" }, { "name":"SOIL9_67960 phosphonoacetate hydrolase : Phosphonoacetate hydrolase OS=Methylophaga lonarensis MPL GN=MPL1_01971 PE=4 SV=1: Phosphodiest\tK19670 phnA; phosphonoacetate hydrolase [EC:3.11.1.2]" }, { "name":"SOIL9_80290 fad dependent oxidoreductase : FAD dependent oxidoreductase TIGR03364 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0396 PE=4 SV=1: DAO\tK27877 pbfD; 2-(methylaminoethyl)phosphonate oxidase [EC:1.5.3.27]" }, { "name":"SOIL9_40210 Metal-dependent hydrolase, beta-lactamase superfamily I OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5179 PE=4 SV=1: Lactamase_B_2\tK06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]" } ] }, { "name":"00450 Selenocompound metabolism [PATH:gms00450]", "children":[ { "name":"SOIL9_75080 methionine synthase : Methionine synthase OS=Gloeobacter kilaueensis JS1 GN=metH PE=4 SV=1: S-methyl_trans: Pterin_bind: B12-binding_2: B12-binding: Met_synt_B12\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SOIL9_56280 cystathionine beta-lyase : Cystathionine beta-lyase\/cystathionine gamma-synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7194 PE=3 SV=1: Cys_Met_Meta_PP\tK01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]" }, { "name":"SOIL9_39320 class v : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_21763 PE=3 SV=1: Aminotran_5\tK11717 sufS; cysteine desulfurase \/ selenocysteine lyase [EC:2.8.1.7 4.4.1.16]" }, { "name":"SOIL9_50740 cysteine desulfurase : Cysteine desulfurase family protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6669 PE=3 SV=1: Aminotran_5\tK11717 sufS; cysteine desulfurase \/ selenocysteine lyase [EC:2.8.1.7 4.4.1.16]" }, { "name":"SOIL9_45980 thioredoxin reductase : Response regulator receiver modulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase OS=Rhodopirellula europaea SH398 GN=RESH_01920 PE=4 SV=1: cNMP_binding: Pyr_redox_2\tK00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]" }, { "name":"SOIL9_82910 thioredoxin reductase : Thioredoxin reductase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3153 PE=3 SV=1: Pyr_redox_2: Pyr_redox\tK00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]" }, { "name":"SOIL9_42720 bifunctional sulfate adenylyltransferase subunit 1 adenylylsulfate kinase protein : Sulfate adenylyltransferase subunit 1 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=cysN PE=3 SV=1: GTP_EFTU: GTP_EFTU_D2: APS_kinase\tK00955 cysNC; bifunctional enzyme CysN\/CysC [EC:2.7.7.4 2.7.1.25]" }, { "name":"SOIL9_42740 sulfate adenylyltransferase subunit 2 : Sulfate adenylyltransferase subunit 2 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=cysD PE=3 SV=1: PAPS_reduct\tK00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]" }, { "name":"SOIL9_23470 segregation protein b : Selenide, water dikinase OS=Chloracidobacterium thermophilum (strain B) GN=selD PE=3 SV=1: AIRS: AIRS_C\tK01008 selD; selenide, water dikinase [EC:2.7.9.3]" }, { "name":"SOIL9_54530 selenocysteine synthase : L-seryl-tRNA(Sec) selenium transferase OS=uncultured planctomycete GN=selA PE=3 SV=1: SelA\tK01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]" }, { "name":"SOIL9_46920 methionyl-trna synthetase : Methionine--tRNA ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=metG PE=3 SV=1: tRNA-synt_1g: Anticodon_1\tK01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]" } ] }, { "name":"00460 Cyanoamino acid metabolism [PATH:gms00460]", "children":[ { "name":"SOIL9_79060 nitrilase : Nitrilase OS=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 GN=ABENE_22140 PE=4 SV=1: CN_hydrolase: ACT_7\tK01501 E3.5.5.1; nitrilase [EC:3.5.5.1]" }, { "name":"SOIL9_06720 gamma-glutamyltransferase : Gamma-glutamyltranspeptidase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2586 PE=4 SV=1: G_glu_transpept\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]" }, { "name":"SOIL9_32580 gamma-glutamyltranspeptidase : Gamma-glutamyltranspeptidase OS=Gemmatimonas aurantiaca (strain T-27 \/ DSM 14586 \/ JCM 11422 \/ NBRC 100505) GN=ggt PE=4 SV=1: G_glu_transpept\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]" }, { "name":"SOIL9_10300 serine hydroxymethyltransferase : Serine hydroxymethyltransferase OS=Blastopirellula marina DSM 3645 GN=glyA PE=3 SV=1: SHMT\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" } ] }, { "name":"00470 D-Amino acid metabolism [PATH:gms00470]", "children":[ { "name":"SOIL9_21150 d-alanine--d-alanine ligase : D-alanine--D-alanine ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6203 PE=4 SV=1: Dala_Dala_lig_C\tK01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]" }, { "name":"SOIL9_31470 d-alanine--d-alanine ligase : D-alanine--D-alanine ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6202 PE=4 SV=1: Dala_Dala_lig_C\tK01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]" }, { "name":"SOIL9_22380 phosphoribosylformylglycinamidine synthase i : Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1060 PE=3 SV=1: GATase_5\tK23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ \/ glutaminase [EC:6.3.5.3 3.5.1.2]" }, { "name":"SOIL9_30440 mandelate racemase muconate lactonizing enzyme family protein : Mandelate racemase\/muconate lactonizing enzyme family protein OS=Rhodopirellula europaea 6C GN=RE6C_00503 PE=4 SV=1: MR_MLE_N: MR_MLE_C\tK19802 ycjG; L-Ala-D\/L-Glu epimerase \/ N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]" }, { "name":"SOIL9_28600 diaminopimelate epimerase : Diaminopimelate epimerase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=dapF PE=3 SV=1: DAP_epimerase: DAP_epimerase\tK01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]" }, { "name":"SOIL9_04340 diaminopimelate decarboxylase : Diaminopimelate decarboxylase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=lysA PE=3 SV=1: Orn_Arg_deC_N: Orn_DAP_Arg_deC\tK01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]" }, { "name":"SOIL9_37420 hydroxyproline-2-epimerase : Hydroxyproline-2-epimerase OS=Burkholderia sacchari GN=NH14_07565 PE=4 SV=1: Pro_racemase\tK12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]" }, { "name":"SOIL9_05890 dihydrodipicolinate synthase : Dihydrodipicolinate synthetase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1258 PE=3 SV=1: DHDPS\tK21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]" }, { "name":"SOIL9_37410 dihydrodipicolinate synthase : Dihydrodipicolinate synthetase family protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_02128 PE=3 SV=1: DHDPS\tK21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]" }, { "name":"SOIL9_05860 -dioxovalerate dehydrogenase : NADP-dependent fatty aldehyde dehydrogenase OS=Acidobacterium capsulatum (strain ATCC 51196 \/ DSM 11244 \/ JCM 7670) GN=aldH PE=4 SV=1: Aldedh\tK13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]" }, { "name":"SOIL9_38710 d-amino acid dehydrogenase small subunit : FAD dependent oxidoreductase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1256 PE=4 SV=1: DAO\tK00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]" } ] }, { "name":"00480 Glutathione metabolism [PATH:gms00480]", "children":[ { "name":"SOIL9_06720 gamma-glutamyltransferase : Gamma-glutamyltranspeptidase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2586 PE=4 SV=1: G_glu_transpept\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]" }, { "name":"SOIL9_32580 gamma-glutamyltranspeptidase : Gamma-glutamyltranspeptidase OS=Gemmatimonas aurantiaca (strain T-27 \/ DSM 14586 \/ JCM 11422 \/ NBRC 100505) GN=ggt PE=4 SV=1: G_glu_transpept\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]" }, { "name":"SOIL9_69390 family protein : Putative lactam utilization protein B-like protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2580 PE=4 SV=1: LamB_YcsF\tK07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]" }, { "name":"SOIL9_69380 urea amidolyase related protein : Urea amidolyase related protein OS=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 \/ DSM 446 \/ 104-1A) GN=Aaci_2789 PE=4 SV=1: AHS2\tK23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]" }, { "name":"SOIL9_84320 carboxylate-amine ligase : Putative glutamate--cysteine ligase 2 OS=Gemmatimonas aurantiaca (strain T-27 \/ DSM 14586 \/ JCM 11422 \/ NBRC 100505) GN=GAU_1362 PE=3 SV=1: GCS2\tK06048 gshA; glutamate---cysteine ligase \/ carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]" }, { "name":"SOIL9_11350 glutamate--cysteine ligase : Uncharacterized protein OS=Sorangium cellulosum So0157-2 GN=SCE1572_35165 PE=4 SV=1: GCS2\tK01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2]" }, { "name":"SOIL9_18450 leucyl aminopeptidase : Probable cytosol aminopeptidase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=pepA PE=3 SV=1: Peptidase_M17_N: Peptidase_M17\tK01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]" }, { "name":"SOIL9_79450 isocitrate dehydrogenase : Isocitrate dehydrogenase [NADP] OS=Catenulispora acidiphila (strain DSM 44928 \/ NRRL B-24433 \/ NBRC 102108 \/ JCM 14897) GN=Caci_7976 PE=3 SV=1: Iso_dh\tK00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]" }, { "name":"SOIL9_23710 6-phosphogluconate dehydrogenase : 6-phosphogluconate dehydrogenase, decarboxylating OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0946 PE=4 SV=1: NAD_binding_2: 6PGD: 6PGD\tK00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]" }, { "name":"SOIL9_73980 6-phosphogluconate dehydrogenase : 6-phosphogluconate dehydrogenase, decarboxylating OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1626 PE=3 SV=1: NAD_binding_2: 6PGD\tK00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]" }, { "name":"SOIL9_08930 glucose-6-phosphate 1-dehydrogenase : Glucose-6-phosphate 1-dehydrogenase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=zwf PE=3 SV=1: G6PD_N: G6PD_C\tK00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]" }, { "name":"SOIL9_23700 glucose-6-phosphate 1-dehydrogenase : Glucose-6-phosphate 1-dehydrogenase OS=uncultured bacterium GN=zwf PE=3 SV=1: G6PD_N: G6PD_C\tK00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]" }, { "name":"SOIL9_34370 glutathione peroxidase : Glutathione peroxidase OS=Rhodopirellula maiorica SM1 GN=RMSM_07161 PE=3 SV=1: GSHPx\tK00432 gpx; glutathione peroxidase [EC:1.11.1.9]" }, { "name":"SOIL9_50900 glutathione peroxidase : Glutathione peroxidase OS=Sulfurospirillum barnesii (strain ATCC 700032 \/ DSM 10660 \/ SES-3) GN=Sulba_2121 PE=3 SV=1: GSHPx\tK00432 gpx; glutathione peroxidase [EC:1.11.1.9]" } ] } ] }, { "name":"09107 Glycan biosynthesis and metabolism", "children":[ { "name":"00520 Amino sugar and nucleotide sugar metabolism [PATH:gms00520]", "children":[ { "name":"SOIL9_75130 anhydro-n-acetylmuramic acid kinase : Anhydro-N-acetylmuramic acid kinase OS=Clostridiaceae bacterium L21-TH-D2 GN=anmK PE=3 SV=1: UPF0075\tK09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]" }, { "name":"SOIL9_66990 phosphoglycolate phosphatase : Phosphoglycolate phosphatase OS=Vibrio nigripulchritudo Pon4 GN=VIBNIPon4_10101 PE=4 SV=1: HAD_2\tK22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]" }, { "name":"SOIL9_49850 nucleotidyl transferase : Putative nucleotidyl transferase OS=Leptospirillum rubarum GN=UBAL2_80490282 PE=4 SV=1: NTP_transf_3\tK00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]" }, { "name":"SOIL9_32010 n-acetylmuramic acid-6-phosphate etherase : N-acetylmuramic acid 6-phosphate etherase OS=Rhodopirellula baltica (strain SH1) GN=murQ PE=3 SV=1: SIS_2: BcrAD_BadFG\tK07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]" }, { "name":"SOIL9_40200 udp-n-acetylhexosamine pyrophosphorylase : UDP-N-acetylglucosamine pyrophosphorylase OS=Rhodopirellula europaea 6C GN=RE6C_04949 PE=4 SV=1: UDPGP\tK00972 UAP1; UDP-N-acetylglucosamine\/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83]" }, { "name":"SOIL9_21820 udp-n-acetylenolpyruvoylglucosamine reductase : UDP-N-acetylenolpyruvoylglucosamine reductase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=murB PE=3 SV=1: FAD_binding_4: MurB_C\tK00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]" }, { "name":"SOIL9_03840 n-acetylglucosamine-6-phosphate deacetylase : N-acetylglucosamine-6-phosphate deacetylase OS=Rhodopirellula europaea SH398 GN=RESH_05545 PE=3 SV=1: Amidohydro_5: Amidohydro_1\tK01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]" }, { "name":"SOIL9_75830 n-acetylglucosamine-6-phosphate deacetylase : N-acetylglucosamine-6-phosphate deacetylase OS=Planctomyces maris DSM 8797 GN=PM8797T_21563 PE=3 SV=1: Amidohydro_4\tK01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]" }, { "name":"SOIL9_68670 glucosamine-6-phosphate deaminase : Glucosamine-6-phosphate deaminase-like protein OS=Planctomyces maris DSM 8797 GN=PM8797T_00694 PE=4 SV=1: Glucosamine_iso: PIG-L\tK02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]" }, { "name":"SOIL9_20360 glutamine amidotransferase : Glutamine--fructose-6-phosphate aminotransferase [isomerizing] OS=uncultured planctomycete GN=glmS PE=3 SV=1: GATase_6: SIS: SIS\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]" }, { "name":"SOIL9_83120 glutamine amidotransferase : Glutamine--fructose-6-phosphate aminotransferase [isomerizing] OS=uncultured planctomycete GN=glmS PE=3 SV=1: GATase_6: SIS: SIS\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]" }, { "name":"SOIL9_58960 carbohydrate family : Kinase, PfkB family OS=Porphyromonas sp. oral taxon 278 str. W7784 GN=HMPREF1556_00125 PE=4 SV=1: PfkB\tK00847 E2.7.1.4; fructokinase [EC:2.7.1.4]" }, { "name":"SOIL9_54790 glucose-6-phosphate isomerase : Glucose-6-phosphate isomerase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_3532 PE=3 SV=1: PGI\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]" }, { "name":"SOIL9_63350 glucose-6-phosphate isomerase : Glucose-6-phosphate isomerase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=pgi PE=3 SV=1: PGI\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]" }, { "name":"SOIL9_00430 mannose-6-phosphate isomerase : Phosphomannose isomerase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2015 PE=4 SV=1: PMI_typeI\tK01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]" }, { "name":"SOIL9_77920 glycoside hydrolase family 39 : Glycoside hydrolase family 39 OS=Firmicutes bacterium CAG:272 GN=BN580_00073 PE=4 SV=1: Glyco_hydro_39\tK01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]" }, { "name":"SOIL9_18500 Transcriptional regulator\/sugar kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2932 PE=4 SV=1: ROK\tK25026 glk; glucokinase [EC:2.7.1.2]" }, { "name":"SOIL9_18530 ROK family protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2979 PE=4 SV=1: ROK\tK25026 glk; glucokinase [EC:2.7.1.2]" }, { "name":"SOIL9_83660 glucokinase xylose repressor : Transcriptional regulator\/sugar kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6144 PE=4 SV=1: ROK\tK25026 glk; glucokinase [EC:2.7.1.2]" }, { "name":"SOIL9_73360 Uncharacterized protein OS=Mesorhizobium sp. L48C026A00 GN=X737_20295 PE=4 SV=1\tK00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]" }, { "name":"SOIL9_08810 phosphoglucomutase : Phosphoglucomutase OS=Rhodovulum sp. PH10 GN=A33M_3475 PE=3 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III: PGM_PMM_IV\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"SOIL9_23680 phosphoglucomutase : Phosphoglucomutase OS=Rhodovulum sp. PH10 GN=A33M_3475 PE=3 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III: PGM_PMM_IV\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"SOIL9_27840 phosphoglucomutase : Uncharacterized protein OS=Candidatus Entotheonella sp. TSY2 GN=ETSY2_36385 PE=4 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"SOIL9_23940 utp--glucose-1-phosphate uridylyltransferase : Putative UTP--glucose-1-phosphate uridylyltransferase OS=Caldilinea aerophila (strain DSM 14535 \/ JCM 11387 \/ NBRC 104270 \/ STL-6-O1) GN=CLDAP_34490 PE=4 SV=1: NTP_transferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]" }, { "name":"SOIL9_09510 udp-glucose 6-dehydrogenase : Nucleotide sugar dehydrogenase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0060 PE=3 SV=1: UDPG_MGDP_dh_N: UDPG_MGDP_dh: UDPG_MGDP_dh_C\tK00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]" }, { "name":"SOIL9_49810 udp-glucose 6-dehydrogenase : Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1: UDPG_MGDP_dh_N: UDPG_MGDP_dh: UDPG_MGDP_dh_C\tK00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]" }, { "name":"SOIL9_17580 galactose-1-phosphate uridylyltransferase : Galactose-1-phosphate uridylyltransferase OS=Leptospirillum ferriphilum YSK GN=Y981_12430 PE=4 SV=1: GalP_UDP_transf\tK00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]" }, { "name":"SOIL9_39640 nad-dependent epimerase dehydratase : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_21943 PE=4 SV=1: Epimerase\tK01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]" }, { "name":"SOIL9_49800 nucleoside-diphosphate sugar epimerase : Nucleoside-diphosphate sugar epimerase OS=Skermanella stibiiresistens SB22 GN=N825_01140 PE=4 SV=1: Epimerase\tK01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]" }, { "name":"SOIL9_84500 udp-glucose 4-epimerase : UDP-glucose 4-epimerase OS=Coraliomargarita akajimensis (strain DSM 45221 \/ IAM 15411 \/ JCM 23193 \/ KCTC 12865) GN=Caka_1849 PE=3 SV=1: Epimerase: Epimerase_Csub\tK01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]" }, { "name":"SOIL9_33280 udp-galactopyranose mutase : Udp-galactopyranose mutase, putative OS=Heliobacterium modesticaldum (strain ATCC 51547 \/ Ice1) GN=glf PE=4 SV=1: NAD_binding_8: GLF\tK01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]" }, { "name":"SOIL9_17130 phosphomannomutase : Phosphoglucomutase\/phosphomannomutase family protein OS=Rhodopirellula europaea 6C GN=RE6C_01147 PE=3 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III: PGM_PMM_IV\tK01840 manB; phosphomannomutase [EC:5.4.2.8]" }, { "name":"SOIL9_38280 mannose-1-phosphate guanyltransferase : Uncharacterized protein OS=uncultured bacterium GN=ACD_20C00350G0017 PE=4 SV=1: NTP_transferase\tK00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]" }, { "name":"SOIL9_40190 mannose-1-phosphate guanylyltransferase : Mannose-1-phosphate guanylyltransferase OS=Blastopirellula marina DSM 3645 GN=DSM3645_16810 PE=4 SV=1: NTP_transferase: MannoseP_isomer\tK00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]" }, { "name":"SOIL9_49940 glucose-1-phosphate cytidylyltransferase : Glucose-1-phosphate cytidylyltransferase OS=Stanieria cyanosphaera (strain ATCC 29371 \/ PCC 7437) GN=Sta7437_1481 PE=4 SV=1: NTP_transferase\tK00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]" }, { "name":"SOIL9_54620 glucose-1-phosphate adenylyltransferase : Glucose-1-phosphate adenylyltransferase OS=Blastopirellula marina DSM 3645 GN=glgC PE=3 SV=1: NTP_transferase\tK00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]" }, { "name":"SOIL9_80220 glucose-1-phosphate adenylyltransferase : Glucose-1-phosphate adenylyltransferase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1974 PE=3 SV=1: NTP_transferase\tK00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]" }, { "name":"SOIL9_82930 spore coat protein : Marine sediment metagenome DNA, contig: S06H3_S06419 OS=marine sediment metagenome GN=S06H3_34823 PE=4 SV=1: NTP_transferase\tK00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]" } ] }, { "name":"00541 Biosynthesis of various nucleotide sugars [PATH:gms00541]", "children":[ { "name":"SOIL9_40200 udp-n-acetylhexosamine pyrophosphorylase : UDP-N-acetylglucosamine pyrophosphorylase OS=Rhodopirellula europaea 6C GN=RE6C_04949 PE=4 SV=1: UDPGP\tK00972 UAP1; UDP-N-acetylglucosamine\/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83]" }, { "name":"SOIL9_13750 udp-n-acetyl-d-glucosamine dehydrogenase : Nucleotide sugar dehydrogenase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_4103 PE=3 SV=1: UDPG_MGDP_dh_N: UDPG_MGDP_dh: UDPG_MGDP_dh_C\tK13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]" }, { "name":"SOIL9_74650 oxidoreductase domain-containing protein : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_06432 PE=4 SV=1: GFO_IDH_MocA: GFO_IDH_MocA_C\tK13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]" }, { "name":"SOIL9_51370 family protein : KpsF\/GutQ family protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0131 PE=4 SV=1: SIS: CBS: CBS\tK06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]" }, { "name":"SOIL9_38930 2-dehydro-3-deoxyphosphooctonate aldolase : 2-dehydro-3-deoxyphosphooctonate aldolase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=kdsA PE=3 SV=1: DAHP_synth_1\tK01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]" }, { "name":"SOIL9_51360 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase : 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0333 PE=4 SV=1: Hydrolase_3\tK03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]" }, { "name":"SOIL9_54060 3-deoxy-manno-octulosonate cytidylyltransferase : 3-deoxy-manno-octulosonate cytidylyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=kdsB PE=3 SV=1: CTP_transf_3\tK00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]" }, { "name":"SOIL9_46870 dihydrodipicolinate synthetase family protein : Dihydrodipicolinate synthase\/N-acetylneuraminate lyase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2107 PE=3 SV=1: DHDPS\tK01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]" }, { "name":"SOIL9_27020 phosphoheptose isomerase : Sugar isomerase (SIS) OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1528 PE=4 SV=1: SIS_2\tK03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]" }, { "name":"SOIL9_49860 sugar isomerase : Sugar isomerase family protein OS=Candidatus Methylomirabilis oxyfera GN=DAMO_0940 PE=4 SV=1: SIS_2\tK03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]" }, { "name":"SOIL9_33210 kinase : GHMP kinase, N-terminal domain protein OS=delta proteobacterium NaphS2 GN=NPH_0756 PE=4 SV=1: GHMP_kinases_N: GHMP_kinases_C\tK07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]" }, { "name":"SOIL9_49840 galactokinase : GHMP kinase OS=Candidatus Methylomirabilis oxyfera GN=DAMO_0938 PE=4 SV=1: GHMP_kinases_N: GHMP_kinases_C\tK07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]" }, { "name":"SOIL9_38290 -heptose -bisphosphate phosphatase : D,D-heptose 1,7-bisphosphate phosphatase OS=uncultured bacterium GN=ACD_47C00467G0003 PE=3 SV=1: Hydrolase_like\tK03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]" }, { "name":"SOIL9_45920 -heptose -bisphosphate phosphatase : D,D-heptose 1,7-bisphosphate phosphatase OS=Geobacter metallireducens (strain GS-15 \/ ATCC 53774 \/ DSM 7210) GN=gmhB PE=3 SV=1: Hydrolase_6: Hydrolase_like\tK03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]" }, { "name":"SOIL9_49870 d--d-heptose -bisphosphate phosphatase : D,D-heptose 1,7-bisphosphate phosphatase OS=Skermanella stibiiresistens SB22 GN=N825_01220 PE=3 SV=1: Hydrolase_like\tK03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]" }, { "name":"SOIL9_08160 adp-heptose synthase : Bifunctional protein HldE OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=hldE PE=3 SV=1: PfkB: CTP_transf_2\tK03272 gmhC; D-beta-D-heptose 7-phosphate kinase \/ D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]" }, { "name":"SOIL9_08050 adp-l-glycero-d-manno-heptose-6-epimerase : ADP-L-glycero-D-manno-heptose-6-epimerase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4927 PE=4 SV=1: Epimerase\tK03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]" }, { "name":"SOIL9_23940 utp--glucose-1-phosphate uridylyltransferase : Putative UTP--glucose-1-phosphate uridylyltransferase OS=Caldilinea aerophila (strain DSM 14535 \/ JCM 11387 \/ NBRC 104270 \/ STL-6-O1) GN=CLDAP_34490 PE=4 SV=1: NTP_transferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]" }, { "name":"SOIL9_09510 udp-glucose 6-dehydrogenase : Nucleotide sugar dehydrogenase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0060 PE=3 SV=1: UDPG_MGDP_dh_N: UDPG_MGDP_dh: UDPG_MGDP_dh_C\tK00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]" }, { "name":"SOIL9_49810 udp-glucose 6-dehydrogenase : Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1: UDPG_MGDP_dh_N: UDPG_MGDP_dh: UDPG_MGDP_dh_C\tK00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]" }, { "name":"SOIL9_49940 glucose-1-phosphate cytidylyltransferase : Glucose-1-phosphate cytidylyltransferase OS=Stanieria cyanosphaera (strain ATCC 29371 \/ PCC 7437) GN=Sta7437_1481 PE=4 SV=1: NTP_transferase\tK00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]" }, { "name":"SOIL9_33250 cdp-4-keto-6-deoxy-d-glucose-3-dehydrase : DegT\/DnrJ\/EryC1\/StrS aminotransferase family protein OS=Nitrospina gracilis (strain 3\/211) GN=NITGR_170046 PE=3 SV=1: DegT_DnrJ_EryC1\tK12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]" }, { "name":"SOIL9_82930 spore coat protein : Marine sediment metagenome DNA, contig: S06H3_S06419 OS=marine sediment metagenome GN=S06H3_34823 PE=4 SV=1: NTP_transferase\tK00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]" }, { "name":"SOIL9_38270 dtdp-glucose -dehydratase : Marine sediment metagenome DNA, contig: S01H1_L05958 OS=marine sediment metagenome GN=S01H1_14926 PE=4 SV=1: Epimerase\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"SOIL9_72580 nad-dependent dehydratase : NAD-dependent epimerase\/dehydratase OS=Rhodothermus marinus (strain ATCC 43812 \/ DSM 4252 \/ R-10) GN=Rmar_1858 PE=4 SV=1: Epimerase\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"SOIL9_82940 spore coat protein : dTDP-glucose 4,6-dehydratase OS=Planctomyces maris DSM 8797 GN=PM8797T_31915 PE=3 SV=1: Epimerase\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"SOIL9_26660 dtdp-4-dehydrorhamnose -epimerase : dTDP-4-dehydrorhamnose 35-epimerase related protein OS=Geobacter sp. (strain M18) GN=GM18_2321 PE=4 SV=1: dTDP_sugar_isom\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]" }, { "name":"SOIL9_49970 dtdp-4-dehydrorhamnose -epimerase : dTDP-4-dehydrorhamnose 3,5-epimerase OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3401 PE=4 SV=1: dTDP_sugar_isom\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]" }, { "name":"SOIL9_41760 dTDP-4-dehydrorhamnose reductase OS=uncultured planctomycete GN=HGMM_F01A04C04 PE=4 SV=1: RmlD_sub_bind\tK00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]" }, { "name":"SOIL9_38280 mannose-1-phosphate guanyltransferase : Uncharacterized protein OS=uncultured bacterium GN=ACD_20C00350G0017 PE=4 SV=1: NTP_transferase\tK00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]" }, { "name":"SOIL9_40190 mannose-1-phosphate guanylyltransferase : Mannose-1-phosphate guanylyltransferase OS=Blastopirellula marina DSM 3645 GN=DSM3645_16810 PE=4 SV=1: NTP_transferase: MannoseP_isomer\tK00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]" }, { "name":"SOIL9_61700 gdp-mannose -dehydratase : GDP-mannose 4,6-dehydratase OS=Sphaerobacter thermophilus (strain DSM 20745 \/ S 6022) GN=gmd PE=3 SV=1: Epimerase\tK01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]" }, { "name":"SOIL9_33220 gdp-l-fucose synthase : GDP-L-fucose synthase OS=Anoxybacillus flavithermus AK1 GN=fcl PE=3 SV=1: Epimerase\tK02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]" }, { "name":"SOIL9_46320 nad-dependent dehydratase : GDP-L-fucose synthase OS=Thermosynechococcus sp. NK55a GN=wcaG PE=3 SV=1: Epimerase\tK02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]" }, { "name":"SOIL9_47670 nad-dependent dehydratase : Marine sediment metagenome DNA, contig: S01H1_S31473 (Fragment) OS=marine sediment metagenome GN=S01H1_69638 PE=3 SV=1: Epimerase\tK02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]" }, { "name":"SOIL9_53930 nad-dependent dehydratase : GDP-L-fucose synthase OS=Brevibacillus panacihumi W25 GN=fcl PE=3 SV=1: Epimerase\tK02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]" }, { "name":"SOIL9_61690 Marine sediment metagenome DNA, contig: S03H2_L04007 (Fragment) OS=marine sediment metagenome GN=S03H2_17566 PE=4 SV=1: Epimerase\tK15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]" } ] }, { "name":"00510 N-Glycan biosynthesis" }, { "name":"00513 Various types of N-glycan biosynthesis" }, { "name":"00512 Mucin type O-glycan biosynthesis" }, { "name":"00515 Mannose type O-glycan biosynthesis" }, { "name":"00514 Other types of O-glycan biosynthesis", "children":[ { "name":"SOIL9_69120 tpr repeat-containing protein : TPR repeat-containing protein OS=Thioploca ingrica GN=THII_3940 PE=4 SV=1: TPR_11: TPR_11: TPR_2: TPR_11: TPR_1: Glyco_transf_41: Glyco_transf_41\tK09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]" } ] }, { "name":"00532 Glycosaminoglycan biosynthesis - chondroitin sulfate \/ dermatan sulfate" }, { "name":"00534 Glycosaminoglycan biosynthesis - heparan sulfate \/ heparin" }, { "name":"00533 Glycosaminoglycan biosynthesis - keratan sulfate" }, { "name":"00531 Glycosaminoglycan degradation" }, { "name":"00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis" }, { "name":"00601 Glycosphingolipid biosynthesis - lacto and neolacto series" }, { "name":"00603 Glycosphingolipid biosynthesis - globo and isoglobo series" }, { "name":"00604 Glycosphingolipid biosynthesis - ganglio series" }, { "name":"00511 Other glycan degradation [PATH:gms00511]", "children":[ { "name":"SOIL9_46700 exo-alpha-sialidase : Exo-alpha-sialidase OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_3506 PE=4 SV=1: BNR_2\tK01186 NEU1; sialidase-1 [EC:3.2.1.18]" }, { "name":"SOIL9_63650 glycosylasparaginase : N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase OS=Elizabethkingia miricola PE=1 SV=1: Asparaginase_2\tK01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]" } ] }, { "name":"00540 Lipopolysaccharide biosynthesis [PATH:gms00540]", "children":[ { "name":"SOIL9_64970 udp-n-acetylglucosamine acyltransferase : Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3720 PE=4 SV=1: Hexapep: Hexapep: Acetyltransf_11\tK00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]" }, { "name":"SOIL9_10000 udp-3-o-: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5597 PE=3 SV=1: LpxC\tK02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]" }, { "name":"SOIL9_27460 udp-3-o-(r-3-hydroxymyristoyl)-glucosamine n-acyltransferase : UDP-3-O-acylglucosamine N-acyltransferase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=lpxD PE=3 SV=1: LpxD: Hexapep: Hexapep: Hexapep\tK02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]" }, { "name":"SOIL9_27470 Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5300 PE=4 SV=1: DUF1009\tK09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]" }, { "name":"SOIL9_18770 lipid-a-disaccharide synthase : Lipid-A-disaccharide synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5294 PE=4 SV=1: LpxB\tK00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]" }, { "name":"SOIL9_08170 tetraacyldisaccharide 4 -kinase : Tetraacyldisaccharide 4'-kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=lpxK PE=3 SV=1: LpxK\tK00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]" }, { "name":"SOIL9_72390 Three-deoxy-D-manno-octulosonic-acid transferase domain protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4166 PE=4 SV=1: Glycos_transf_N\tK02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]" }, { "name":"SOIL9_74630 lipid a biosynthesis acyltransferase : Lauroyl\/myristoyl acyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5778 PE=4 SV=1: Lip_A_acyltrans\tK02517 lpxL; Kdo2-lipid IVA lauroyltransferase\/acyltransferase [EC:2.3.1.241 2.3.1.-]" }, { "name":"SOIL9_53860 chromosome segregation protein : Uncharacterized protein OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_0196 PE=4 SV=1: PSCyt2\tK12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]" }, { "name":"SOIL9_67920 lipopolysaccharide heptosyltransferase ii : ADP-heptose:LPS heptosyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1554 PE=4 SV=1: Glyco_transf_9\tK02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]" }, { "name":"SOIL9_08150 lipopolysaccharide heptosyltransferase ii : Lipopolysaccharide heptosyltransferase II OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3093 PE=4 SV=1: Glyco_transf_9\tK02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]" }, { "name":"SOIL9_08120 Glycosyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3097 PE=4 SV=1: Glyco_transf_4: Glycos_transf_1\tK02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]" } ] }, { "name":"00542 O-Antigen repeat unit biosynthesis" }, { "name":"00550 Peptidoglycan biosynthesis [PATH:gms00550]", "children":[ { "name":"SOIL9_21820 udp-n-acetylenolpyruvoylglucosamine reductase : UDP-N-acetylenolpyruvoylglucosamine reductase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=murB PE=3 SV=1: FAD_binding_4: MurB_C\tK00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]" }, { "name":"SOIL9_21150 d-alanine--d-alanine ligase : D-alanine--D-alanine ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6203 PE=4 SV=1: Dala_Dala_lig_C\tK01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]" }, { "name":"SOIL9_31470 d-alanine--d-alanine ligase : D-alanine--D-alanine ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6202 PE=4 SV=1: Dala_Dala_lig_C\tK01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]" }, { "name":"SOIL9_40790 udp pyrophosphate synthase : Isoprenyl transferase OS=Blastopirellula marina DSM 3645 GN=DSM3645_07730 PE=3 SV=1: Prenyltransf\tK00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]" }, { "name":"SOIL9_69400 udp pyrophosphate phosphatase : Undecaprenyl-diphosphatase OS=Chlorobium phaeobacteroides (strain BS1) GN=uppP PE=3 SV=1: BacA\tK06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]" }, { "name":"SOIL9_10270 d-alanyl-d-alanine carboxypeptidase : D-alanyl-D-alanine carboxypeptidase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2801 PE=3 SV=1: Peptidase_S11\tK07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5\/6) [EC:3.4.16.4]" }, { "name":"SOIL9_40820 d-ala-d-ala carboxypeptidase : D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6651 PE=4 SV=1: Peptidase_S13\tK07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase\/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]" }, { "name":"SOIL9_63270 Beta-lactamase OS=Rhodopirellula europaea SH398 GN=RESH_01866 PE=4 SV=1: Beta-lactamase\tK21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]" } ] }, { "name":"00552 Teichoic acid biosynthesis [PATH:gms00552]", "children":[ { "name":"SOIL9_69400 udp pyrophosphate phosphatase : Undecaprenyl-diphosphatase OS=Chlorobium phaeobacteroides (strain BS1) GN=uppP PE=3 SV=1: BacA\tK06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]" } ] }, { "name":"00571 Lipoarabinomannan (LAM) biosynthesis" }, { "name":"00572 Arabinogalactan biosynthesis - Mycobacterium" }, { "name":"00543 Exopolysaccharide biosynthesis [PATH:gms00543]", "children":[ { "name":"SOIL9_05740 membrane-bound o-acyltransferase family mboat : Putative membrane protein involved in D-alanine export OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5818 PE=4 SV=1: MBOAT\tK19294 algI; alginate O-acetyltransferase complex protein AlgI" }, { "name":"SOIL9_38000 alginate o-acetyltransferase : Membrane bound O-acyl transferase MBOAT family protein OS=Syntrophothermus lipocalidus (strain DSM 12680 \/ TGB-C1) GN=Slip_0153 PE=4 SV=1: MBOAT\tK19294 algI; alginate O-acetyltransferase complex protein AlgI" }, { "name":"SOIL9_13760 serine o-acetyltransferase : Serine acetyltransferase OS=Chondromyces apiculatus DSM 436 GN=CAP_8914 PE=3 SV=1: Hexapep\tK00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]" }, { "name":"SOIL9_71120 serine o-acetyltransferase : Serine acetyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6197 PE=4 SV=1: Hexapep: Hexapep_2\tK00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]" }, { "name":"SOIL9_63410 Marine sediment metagenome DNA, contig: S01H1_L00235 OS=marine sediment metagenome GN=S01H1_03843 PE=4 SV=1: Glyco_tranf_2_3\tK16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]" } ] } ] }, { "name":"09108 Metabolism of cofactors and vitamins", "children":[ { "name":"00730 Thiamine metabolism [PATH:gms00730]", "children":[ { "name":"SOIL9_16230 thiamine biosynthesis protein : Phosphomethylpyrimidine synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=thiC PE=3 SV=1: ThiC\tK03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]" }, { "name":"SOIL9_00460 cysteine desulfurase : Cysteine desulfurase family protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0245 PE=4 SV=1: Aminotran_5: Aminotran_5\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]" }, { "name":"SOIL9_25240 cysteine desulfurase : Cysteine desulfurase IscS OS=Acidobacterium capsulatum (strain ATCC 51196 \/ DSM 11244 \/ JCM 7670) GN=icsS2 PE=3 SV=1: Aminotran_5\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]" }, { "name":"SOIL9_07620 fad dependent oxidoreductase : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_23936 PE=4 SV=1: DAO\tK03153 thiO; glycine oxidase [EC:1.4.3.19]" }, { "name":"SOIL9_17680 fad dependent oxidoreductase : Glycine oxidase ThiO OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5203 PE=4 SV=1: DAO\tK03153 thiO; glycine oxidase [EC:1.4.3.19]" }, { "name":"SOIL9_66120 1-deoxy-d-xylulose-5-phosphate synthase : 1-deoxy-D-xylulose-5-phosphate synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=dxs PE=3 SV=1: DXP_synthase_N: Transket_pyr: Transketolase_C\tK01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]" }, { "name":"SOIL9_37390 thiazole synthase : Thiazole synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=thiG PE=3 SV=1: ThiS: ThiG\tK03149 thiG; thiazole synthase [EC:2.8.1.10]" }, { "name":"SOIL9_30720 thiamine-phosphate pyrophosphorylase : Thiamine-phosphate synthase OS=Blastopirellula marina DSM 3645 GN=thiE PE=3 SV=1: Clp_N: TMP-TENI\tK00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]" }, { "name":"SOIL9_42500 thiamine-monophosphate kinase : Thiamine-monophosphate kinase OS=Planctomyces maris DSM 8797 GN=thiL PE=3 SV=1: AIRS: AIRS_C\tK00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]" }, { "name":"SOIL9_68200 ribosome small subunit-dependent gtpase a : Putative ribosome biogenesis GTPase RsgA OS=uncultured planctomycete GN=rsgA PE=3 SV=1: DUF258\tK06949 rsgA; ribosome biogenesis GTPase \/ thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]" }, { "name":"SOIL9_84780 adenylate kinase : Adenylate kinase OS=Streptomyces hygroscopicus subsp. jinggangensis (strain 5008) GN=adk PE=3 SV=1: ADK: ADK_lid\tK00939 adk; adenylate kinase [EC:2.7.4.3]" } ] }, { "name":"00740 Riboflavin metabolism [PATH:gms00740]", "children":[ { "name":"SOIL9_53990 -dihydroxy-2-butanone 4-phosphate synthase : Riboflavin biosynthesis protein RibBA OS=Thermodesulfobacterium commune DSM 2178 GN=ribBA PE=3 SV=1: DHBP_synthase: GTP_cyclohydro2\tK14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase \/ GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]" }, { "name":"SOIL9_85160 riboflavin biosynthesis protein : Riboflavin biosynthesis protein RibD OS=Planctomyces maris DSM 8797 GN=PM8797T_10129 PE=3 SV=1: dCMP_cyt_deam_1: RibD_C\tK11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase \/ 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]" }, { "name":"SOIL9_21550 -dimethyl-8-ribityllumazine synthase : 6,7-dimethyl-8-ribityllumazine synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ribH PE=3 SV=1: DMRL_synthase\tK00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]" }, { "name":"SOIL9_19910 riboflavin synthase subunit alpha : Riboflavin synthase subunit alpha OS=Rhodopirellula europaea 6C GN=RE6C_04406 PE=4 SV=1: Lum_binding: Lum_binding\tK00793 ribE; riboflavin synthase [EC:2.5.1.9]" }, { "name":"SOIL9_73340 riboflavin biosynthesis protein : Riboflavin biosynthesis protein OS=Gemmata sp. Wa1-1 PE=3 SV=1: FAD_syn: Flavokinase\tK11753 ribF; riboflavin kinase \/ FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]" }, { "name":"SOIL9_54600 adp-ribose pyrophosphatase : NTP pyrophosphohydrolase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5018 PE=3 SV=1: NUDIX\tK01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]" }, { "name":"SOIL9_29930 3-octaprenyl-4-hydroxybenzoate carboxy-lyase : 3-octaprenyl-4-hydroxybenzoate carboxy-lyase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1506 PE=4 SV=1: Flavoprotein\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]" } ] }, { "name":"00750 Vitamin B6 metabolism [PATH:gms00750]", "children":[ { "name":"SOIL9_17740 pyridoxine pyridoxamine 5 -phosphate oxidase : Pyridoxine\/pyridoxamine 5'-phosphate oxidase OS=Pseudomonas aeruginosa LESlike4 GN=pdxH PE=3 SV=1: Pyridox_oxidase: PNPOx_C\tK00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]" }, { "name":"SOIL9_57560 4-hydroxythreonine-4-phosphate dehydrogenase : 4-hydroxythreonine-4-phosphate dehydrogenase OS=uncultured Verrucomicrobia bacterium GN=pdxA PE=3 SV=1: PdxA\tK00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]" }, { "name":"SOIL9_56490 pyridoxine 5 -phosphate synthase : Pyridoxine 5'-phosphate synthase OS=Halothece sp. (strain PCC 7418) GN=pdxJ PE=3 SV=1: PdxJ\tK03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]" }, { "name":"SOIL9_03030 threonine synthase : Threonine synthase domain protein OS=Rhodopirellula maiorica SM1 GN=RMSM_03648 PE=4 SV=1: PALP\tK01733 thrC; threonine synthase [EC:4.2.3.1]" }, { "name":"SOIL9_38150 threonine synthase : Threonine synthase OS=Candidatus Entotheonella sp. TSY1 GN=ETSY1_27390 PE=4 SV=1: PALP\tK01733 thrC; threonine synthase [EC:4.2.3.1]" }, { "name":"SOIL9_50800 threonine synthase : Threonine synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6665 PE=4 SV=1: PALP\tK01733 thrC; threonine synthase [EC:4.2.3.1]" } ] }, { "name":"00760 Nicotinate and nicotinamide metabolism [PATH:gms00760]", "children":[ { "name":"SOIL9_12040 l-aspartate oxidase : L-aspartate oxidase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6529 PE=4 SV=1: FAD_binding_2: Succ_DH_flav_C\tK00278 nadB; L-aspartate oxidase [EC:1.4.3.16]" }, { "name":"SOIL9_70050 quinolinate synthetase : Quinolinate synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2813 PE=4 SV=1: NadA\tK03517 nadA; quinolinate synthase [EC:2.5.1.72]" }, { "name":"SOIL9_29190 nicotinate-nucleotide pyrophosphorylase : Quinolinate phosphoribosyl transferase OS=Gemmata sp. Wa1-1 GN=nadC PE=3 SV=1: QRPTase_N: QRPTase_C\tK00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]" }, { "name":"SOIL9_84360 nicotinate phosphoribosyltransferase : Nicotinate phosphoribosyltransferase OS=uncultured bacterium (gcode 4) GN=ACD_80C00167G0018 PE=4 SV=1\tK00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]" }, { "name":"SOIL9_37970 purine nucleoside phosphorylase : Purine nucleoside phosphorylase OS=Dorea longicatena CAG:42 GN=BN651_01432 PE=3 SV=1: PNP_UDP_1\tK03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]" }, { "name":"SOIL9_41970 purine nucleoside phosphorylase : Purine nucleoside phosphorylase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1303 PE=3 SV=1: PNP_UDP_1\tK03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]" }, { "name":"SOIL9_06860 stationary phase survival protein : Stationary-phase survival protein SurE OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_0037 PE=4 SV=1: SurE\tK03787 surE; 5'\/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]" }, { "name":"SOIL9_23500 stationary phase survival protein : 5'-nucleotidase SurE OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=surE PE=3 SV=1: SurE\tK03787 surE; 5'\/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]" }, { "name":"SOIL9_80310 had-superfamily subfamily iia : Putative sugar phosphatase of HAD superfamily OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3472 PE=4 SV=1: Hydrolase_6: Hydrolase_like\tK02566 nagD; 5'-nucleotidase [EC:3.1.3.5]" }, { "name":"SOIL9_17590 nicotinate-nucleotide adenylyltransferase : Probable nicotinate-nucleotide adenylyltransferase OS=Gemmata sp. Wa1-1 GN=nadD PE=3 SV=1: CTP_transf_2\tK00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]" }, { "name":"SOIL9_84380 nad synthetase : NAD+ synthetase OS=Clostridium thermocellum (strain DSM 1313 \/ LMG 6656 \/ LQ8) GN=Clo1313_1901 PE=3 SV=1: CN_hydrolase: NAD_synthase\tK01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]" }, { "name":"SOIL9_85700 nicotinamidase : Nicotinamidase OS=Winogradskyella psychrotolerans RS-3 GN=ADIWIN_0909 PE=4 SV=1: Isochorismatase\tK08281 pncA; nicotinamidase\/pyrazinamidase [EC:3.5.1.19 3.5.1.-]" }, { "name":"SOIL9_16170 nad-dependent protein deacylase : NAD-dependent protein deacylase OS=Syntrophobacter fumaroxidans (strain DSM 10017 \/ MPOB) GN=cobB PE=3 SV=1: SIR2\tK12410 cobB; NAD-dependent protein deacetylase\/lipoamidase [EC:2.3.1.286 2.3.1.313]" }, { "name":"SOIL9_70070 soluble pyridine nucleotide transhydrogenase : Soluble pyridine nucleotide transhydrogenase OS=Corallococcus coralloides (strain ATCC 25202 \/ DSM 2259 \/ NBRC 100086 \/ M2) GN=sthA PE=4 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]" }, { "name":"SOIL9_29450 succinate-semialdehyde dehydrogenase : NAD-dependent aldehyde dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1922 PE=3 SV=1: Aldedh\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" } ] }, { "name":"00770 Pantothenate and CoA biosynthesis [PATH:gms00770]", "children":[ { "name":"SOIL9_38330 acetolactate synthase : Uncharacterized protein OS=uncultured bacterium GN=ACD_32C00113G0025 PE=3 SV=1: TPP_enzyme_N: TPP_enzyme_M: TPP_enzyme_C\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SOIL9_62530 acetolactate synthase : Acetolactate synthase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0933 PE=3 SV=1: TPP_enzyme_N: TPP_enzyme_M: TPP_enzyme_C\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SOIL9_82560 thiamine pyrophosphate n-terminal tpp binding domain protein : Thiamine pyrophosphate central domain-containing protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2596 PE=3 SV=1: TPP_enzyme_N: TPP_enzyme_M: TPP_enzyme_C\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SOIL9_82260 acetolactate synthase small subunit : Acetolactate synthase, small subunit OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4688 PE=4 SV=1: ACT: ALS_ss_C\tK01653 E2.2.1.6S; acetolactate synthase I\/III small subunit [EC:2.2.1.6]" }, { "name":"SOIL9_27260 ketol-acid reductoisomerase : Ketol-acid reductoisomerase OS=Fulvivirga imtechensis AK7 GN=C900_01877 PE=4 SV=1: IlvN: IlvC\tK00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]" }, { "name":"SOIL9_32440 dihydroxy-acid dehydratase : Dihydroxy-acid dehydratase OS=Chthonomonas calidirosea (strain DSM 23976 \/ ICMP 18418 \/ T49) GN=ilvD PE=3 SV=1: ILVD_EDD\tK01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]" }, { "name":"SOIL9_74080 3-methyl-2-oxobutanoate hydroxymethyltransferase : 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Desulfobacter postgatei 2ac9 GN=panB PE=3 SV=1: Pantoate_transf\tK00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]" }, { "name":"SOIL9_02890 2-dehydropantoate 2-reductase : 2-dehydropantoate 2-reductase OS=Variovorax paradoxus (strain EPS) GN=Varpa_2689 PE=3 SV=1: ApbA: ApbA_C\tK00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]" }, { "name":"SOIL9_56730 pantoate--beta-alanine ligase : Pantothenate synthetase OS=Thermotoga maritima (strain ATCC 43589 \/ MSB8 \/ DSM 3109 \/ JCM 10099) GN=panC PE=3 SV=1: Pantoate_ligase\tK01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]" }, { "name":"SOIL9_06510 transcriptional baf family : Type III pantothenate kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=coaX PE=3 SV=1: Pan_kinase\tK03525 coaX; type III pantothenate kinase [EC:2.7.1.33]" }, { "name":"SOIL9_08040 Phosphopantothenate-cysteine ligase OS=Enterococcus moraviensis ATCC BAA-383 GN=I586_01697 PE=4 SV=1: DFP: DFP\tK21977 coaB; phosphopantothenate---cysteine ligase (CTP) [EC:6.3.2.5]" }, { "name":"SOIL9_40330 phosphopantothenate--cysteine ligase : Phosphopantothenoylcysteine synthetase OS=Catellicoccus marimammalium M35\/04\/3 GN=C683_0479 PE=4 SV=1: DFP\tK21977 coaB; phosphopantothenate---cysteine ligase (CTP) [EC:6.3.2.5]" }, { "name":"SOIL9_47980 Phosphopantothenoylcysteine synthase\/decarboxylase OS=Lentisphaera araneosa HTCC2155 GN=LNTAR_19847 PE=4 SV=1: DFP\tK21977 coaB; phosphopantothenate---cysteine ligase (CTP) [EC:6.3.2.5]" }, { "name":"SOIL9_55360 Phosphopantothenoylcysteine synthase\/decarboxylase OS=Lentisphaera araneosa HTCC2155 GN=LNTAR_19847 PE=4 SV=1: DFP\tK21977 coaB; phosphopantothenate---cysteine ligase (CTP) [EC:6.3.2.5]" }, { "name":"SOIL9_08030 phosphopantothenoylcysteine decarboxylase : Phosphopantothenoylcysteine synthetase\/decarboxylase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4866 PE=4 SV=1: Flavoprotein\tK01598 PPCDC; phosphopantothenoylcysteine decarboxylase [EC:4.1.1.36]" }, { "name":"SOIL9_03690 phosphopantetheine adenylyltransferase : Phosphopantetheine adenylyltransferase OS=Rhodopirellula baltica WH47 GN=coaD PE=3 SV=1: CTP_transf_2\tK00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]" }, { "name":"SOIL9_21520 dephospho-kinase : Dephospho-CoA kinase OS=Planctomyces maris DSM 8797 GN=coaE PE=3 SV=1: CoaE\tK00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]" }, { "name":"SOIL9_07700 acp synthase : Holo-[acyl-carrier-protein] synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=acpS PE=3 SV=1: ACPS\tK00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]" }, { "name":"SOIL9_21490 4 -phosphopantetheinyl transferase : Phosphopantetheinyl transferase OS=Oscillatoria acuminata PCC 6304 GN=Oscil6304_3459 PE=4 SV=1: ACPS\tK06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]" }, { "name":"SOIL9_37490 acp phosphodiesterase : Uncharacterized protein OS=Cyanothece sp. (strain PCC 7822) GN=Cyan7822_3479 PE=4 SV=1: DUF479\tK08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]" }, { "name":"SOIL9_54460 branched-chain amino acid aminotransferase : Branched chain amino acid aminotransferase apoenzyme OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_2136 PE=3 SV=1: Aminotran_4\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"SOIL9_68000 branched-chain amino acid aminotransferase : Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase \/ branched chain amino acid aminotransferase OS=Rhodospirillum photometricum DSM 122 GN=RSPPHO_02087 PE=3 SV=1: Aminotran_4\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"SOIL9_79230 aspartate decarboxylase : Aspartate 1-decarboxylase OS=uncultured bacterium GN=panD PE=3 SV=1: Asp_decarbox\tK01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]" }, { "name":"SOIL9_59540 betaine-aldehyde dehydrogenase : Aldehyde dehydrogenase (Acceptor) OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_2599 PE=3 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_82990 aldehyde dehydrogenase : Aldehyde dehydrogenase OS=uncultured planctomycete GN=HGMM_F16E03C18 PE=4 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" } ] }, { "name":"00780 Biotin metabolism [PATH:gms00780]", "children":[ { "name":"SOIL9_12770 3-oxoacyl-acp synthase : 3-oxoacyl-(Acyl-carrier-protein) synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1387 PE=3 SV=1: ketoacyl-synt: Ketoacyl-synt_C\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"SOIL9_55330 3-oxoacyl-acp synthase : 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3120 PE=3 SV=1: ketoacyl-synt: Ketoacyl-synt_C\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"SOIL9_55340 3-oxoacyl-acp synthase : 3-oxoacyl-(Acyl carrier protein) synthase OS=Planctomyces maris DSM 8797 GN=PM8797T_28459 PE=3 SV=1: ketoacyl-synt: Ketoacyl-synt_C\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"SOIL9_62300 3-oxoacyl-acp synthase : 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=uncultured Acidobacteria bacterium A2 PE=3 SV=1: ketoacyl-synt: Ketoacyl-synt_C\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"SOIL9_72150 3-oxoacyl-acp synthase : 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3120 PE=3 SV=1: ketoacyl-synt: Ketoacyl-synt_C\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"SOIL9_72160 3-oxoacyl-acp synthase : 3-oxoacyl-(Acyl carrier protein) synthase OS=Planctomyces maris DSM 8797 GN=PM8797T_28459 PE=3 SV=1: ketoacyl-synt: Ketoacyl-synt_C\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"SOIL9_04740 3-ketoacyl-acp reductase : Short-chain dehydrogenase\/reductase SDR OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_5617 PE=3 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_06020 3-oxoacyl-acp reductase : Short-chain dehydrogenase\/reductase SDR OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_6588 PE=3 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_09470 short-chain dehydrogenase reductase sdr : Short-chain dehydrogenase\/reductase SDR OS=Pseudomonas viridiflava UASWS0038 GN=AAI_04629 PE=3 SV=1: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_12530 oxidoreductase : Short-chain dehydrogenase OS=Bradyrhizobium japonicum SEMIA 5079 GN=BJS_02062 PE=4 SV=1: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_12540 oxidoreductase : Oxidoreductase OS=Calothrix sp. 336\/3 GN=IJ00_10970 PE=3 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_24270 3-ketoacyl-acp reductase : 3-oxoacyl-[acyl-carrier-protein] reductase protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_05944 PE=3 SV=1: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_32060 oxidoreductase : 3-oxoacyl-(Acyl-carrier-protein) reductase OS=Granulicella mallensis (strain ATCC BAA-1857 \/ DSM 23137 \/ MP5ACTX8) GN=AciX8_0105 PE=4 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_35470 oxidoreductase : Oxidoreductase OS=Burkholderia grimmiae GN=BG57_27380 PE=4 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_72190 3-oxoacyl-(acyl-carrier-protein) reductase : 3-oxoacyl-(Acyl-carrier protein) reductase OS=Planctomyces maris DSM 8797 GN=PM8797T_12848 PE=3 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_75490 3-oxoacyl-acp reductase : Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1242 PE=4 SV=1: HPPK: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_77780 oxidoreductase : Putative short-chain dehydrogenase OS=Planctomyces maris DSM 8797 GN=PM8797T_09224 PE=3 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_79360 short-chain dehydrogenase : 3-oxoacyl-(Acyl-carrier-protein) reductase OS=Runella slithyformis (strain ATCC 29530 \/ DSM 19594 \/ LMG 11500 \/ NCIMB 11436 \/ LSU 4) GN=Runsl_1409 PE=4 SV=1: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_79600 short-chain dehydrogenase : Short chain dehydrogenase family protein OS=Mesorhizobium huakuii 7653R GN=fabG20 PE=3 SV=1: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_81440 oxidoreductase : Oxidoreductase OS=Burkholderia grimmiae GN=BG57_27380 PE=4 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_24370 Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabA\/FabZ OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0858 PE=4 SV=1: FabA\tK02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]" }, { "name":"SOIL9_72170 Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabA\/FabZ OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3121 PE=4 SV=1: FabA\tK02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]" }, { "name":"SOIL9_72200 hydroxymyristoyl-acp dehydratase : Marine sediment metagenome DNA, contig: S06H3_S02804 OS=marine sediment metagenome GN=S06H3_29562 PE=4 SV=1: FabA\tK02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]" }, { "name":"SOIL9_50820 enoyl-: Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02448 PE=4 SV=1: adh_short_C2\tK00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]" }, { "name":"SOIL9_29200 biotin--acetyl--carboxylase ligase : Biotin--acetyl-CoA-carboxylase ligase OS=Listeriaceae bacterium FSL A5-0281 GN=EP57_08620 PE=4 SV=1: BPL_LplA_LipB\tK03524 birA; BirA family transcriptional regulator, biotin operon repressor \/ biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]" } ] }, { "name":"00785 Lipoic acid metabolism [PATH:gms00785]", "children":[ { "name":"SOIL9_17640 lipoate-protein ligase b : Lipoate-protein ligase B OS=Planctomyces maris DSM 8797 GN=PM8797T_22213 PE=4 SV=1\tK03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]" }, { "name":"SOIL9_07040 biotin lipoate a b protein ligase : Biotin\/lipoate A\/B protein ligase OS=Rhodopirellula maiorica SM1 GN=RMSM_03244 PE=4 SV=1: BPL_LplA_LipB\tK23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]" }, { "name":"SOIL9_17630 lipoyl synthase : Lipoyl synthase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=lipA PE=3 SV=1: Radical_SAM\tK03644 lipA; lipoyl synthase [EC:2.8.1.8]" }, { "name":"SOIL9_73120 biotin lipoate a b protein ligase : Biotin\/lipoate A\/B protein ligase OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD1935 PE=4 SV=1: BPL_LplA_LipB\tK03800 lplA; lipoate---protein ligase [EC:6.3.1.20]" }, { "name":"SOIL9_55200 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4534 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_74420 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6538 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_31720 pyruvate dehydrogenase : Pyruvate dehydrogenase E1 component OS=Rhodopirellula europaea SH398 GN=RESH_06116 PE=4 SV=1: Transketolase_N: Transketolase_N\tK00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]" }, { "name":"SOIL9_31700 dihydrolipoamide acetyltransferase : Pyruvate dehydrogenase E2 component OS=Melioribacter roseus (strain JCM 17771 \/ P3M-2) GN=MROS_0858 PE=3 SV=1: Biotin_lipoyl: Biotin_lipoyl: E3_binding: 2-oxoacid_dh\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"SOIL9_79590 branched-chain alpha-keto acid dehydrogenase subunit e2 : Catalytic domain of components of various dehydrogenase complexes OS=Sulfolobus islandicus (strain Y.N.15.51 \/ Yellowstone #2) GN=YN1551_2054 PE=4 SV=1: Biotin_lipoyl: E3_binding: 2-oxoacid_dh\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"SOIL9_74400 mfs transporter : 2-oxoglutarate dehydrogenase, E1 component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6536 PE=4 SV=1: E1_dh: Transket_pyr\tK00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]" }, { "name":"SOIL9_74410 dihydrolipoamide succinyltransferase : Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6537 PE=3 SV=1: Biotin_lipoyl: E3_binding: 2-oxoacid_dh\tK00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]" }, { "name":"SOIL9_79190 3-methyl-2-oxobutanoate dehydrogenase : Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1: E1_dh\tK00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]" }, { "name":"SOIL9_79200 3-methyl-2-oxobutanoate dehydrogenase : Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1: Transket_pyr: Transketolase_C\tK00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]" }, { "name":"SOIL9_79580 dehydrogenase e1 component : 2-oxoisovalerate dehydrogenase E1 OS=Mesorhizobium sp. LSJC280B00 GN=X772_08145 PE=4 SV=1: E1_dh: Transket_pyr: Transketolase_C\tK11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]" }, { "name":"SOIL9_79210 branched-chain alpha-keto acid dehydrogenase subunit e2 : Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1: Biotin_lipoyl: E3_binding: 2-oxoacid_dh\tK09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]" }, { "name":"SOIL9_53380 glycine dehydrogenase subunit 1 : Probable glycine dehydrogenase (decarboxylating) subunit 1 OS=Blastopirellula marina DSM 3645 GN=gcvPA PE=3 SV=1: GDC-P\tK00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]" }, { "name":"SOIL9_53360 glycine dehydrogenase subunit 2 : Probable glycine dehydrogenase (decarboxylating) subunit 2 OS=uncultured planctomycete GN=gcvPB PE=3 SV=1: GDC-P\tK00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]" }, { "name":"SOIL9_53400 glycine cleavage system t protein : Aminomethyltransferase OS=Planctomyces maris DSM 8797 GN=gcvT PE=3 SV=1: GCV_T: GCV_T_C\tK00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]" }, { "name":"SOIL9_29290 Glycine cleavage H-protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4504 PE=4 SV=1: GCV_H\tK02437 gcvH; glycine cleavage system H protein" }, { "name":"SOIL9_53390 glycine cleavage system protein h : Glycine cleavage system H protein OS=Planctomyces maris DSM 8797 GN=gcvH PE=3 SV=1: GCV_H\tK02437 gcvH; glycine cleavage system H protein" } ] }, { "name":"00790 Folate biosynthesis [PATH:gms00790]", "children":[ { "name":"SOIL9_69780 gtp cyclohydrolase i : GTP cyclohydrolase 1 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=folE PE=3 SV=1: GTP_cyclohydroI\tK01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]" }, { "name":"SOIL9_22500 alkaline phosphatase : Phosphodiesterase\/alkaline phosphatase D OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7244 PE=4 SV=1: PhoD\tK01113 phoD; alkaline phosphatase D [EC:3.1.3.1]" }, { "name":"SOIL9_34920 alkaline phosphatase : Phosphodiesterase\/alkaline phosphatase D OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7244 PE=4 SV=1: PhoD\tK01113 phoD; alkaline phosphatase D [EC:3.1.3.1]" }, { "name":"SOIL9_34380 dihydropteroate synthase : Dihydropteroate synthase OS=uncultured planctomycete GN=HGMM_F11F07C23 PE=3 SV=1: Pterin_bind\tK00796 folP; dihydropteroate synthase [EC:2.5.1.15]" }, { "name":"SOIL9_61920 bifunctional folylpolyglutamate synthase dihydrofolate synthase : Folylpolyglutamate synthase\/dihydrofolate synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5224 PE=4 SV=1: Mur_ligase_M: Mur_ligase_C\tK11754 folC; dihydrofolate synthase \/ folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]" }, { "name":"SOIL9_53990 -dihydroxy-2-butanone 4-phosphate synthase : Riboflavin biosynthesis protein RibBA OS=Thermodesulfobacterium commune DSM 2178 GN=ribBA PE=3 SV=1: DHBP_synthase: GTP_cyclohydro2\tK14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase \/ GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]" }, { "name":"SOIL9_19960 para-aminobenzoate synthase : Para-aminobenzoate synthase component I OS=Planctomyces maris DSM 8797 GN=PM8797T_00312 PE=4 SV=1: Anth_synt_I_N: Chorismate_bind\tK01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]" }, { "name":"SOIL9_11430 6-pyruvoyl-tetrahydropterin synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1233 PE=4 SV=1: PTPS\tK01737 queD; 6-pyruvoyltetrahydropterin\/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]" }, { "name":"SOIL9_67890 6-pyruvoyl-tetrahydropterin synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5864 PE=4 SV=1: PTPS\tK01737 queD; 6-pyruvoyltetrahydropterin\/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]" }, { "name":"SOIL9_76370 pterin-4-alpha-carbinolamine dehydratase : 4a-hydroxytetrahydrobiopterin dehydratase OS=Rhodopirellula maiorica SM1 GN=RMSM_03401 PE=4 SV=1: Pterin_4a\tK01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]" }, { "name":"SOIL9_48040 short-chain dehydrogenase reductase sdr : Short-chain dehydrogenase\/reductase SDR OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1052 PE=4 SV=1: adh_short\tK03793 PTR1; pteridine reductase [EC:1.5.1.33]" }, { "name":"SOIL9_83010 short-chain dehydrogenase reductase sdr : Short-chain dehydrogenase\/reductase SDR OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1052 PE=4 SV=1: adh_short\tK03793 PTR1; pteridine reductase [EC:1.5.1.33]" }, { "name":"SOIL9_34730 7-carboxy-7-deazaguanine synthase : 7-carboxy-7-deazaguanine synthase OS=Sorangium cellulosum (strain So ce56) GN=queE PE=3 SV=1: Fer4_14: Radical_SAM\tK10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]" }, { "name":"SOIL9_67880 7-cyano-7-deazaguanine synthase : 7-cyano-7-deazaguanine synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5863 PE=4 SV=1: QueC\tK06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]" }, { "name":"SOIL9_73510 7-cyano-7-deazaguanine synthase : 7-cyano-7-deazaguanine synthase OS=Myxococcus fulvus (strain ATCC BAA-855 \/ HW-1) GN=queC PE=3 SV=1: QueC\tK06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]" }, { "name":"SOIL9_73520 7-cyano-7-deazaguanine reductase : NADPH-dependent 7-cyano-7-deazaguanine reductase OS=Rhodopirellula sallentina SM41 GN=queF PE=3 SV=1: QueF\tK09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]" }, { "name":"SOIL9_19980 Beta-ribofuranosylaminobenzene 5'-phosphate synthase OS=Gemmata sp. Wa1-1 GN=mptG PE=4 SV=1: GHMP_kinases_C\tK06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54]" }, { "name":"SOIL9_69830 molybdenum cofactor biosynthesis protein : Cyclic pyranopterin monophosphate synthase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=moaA PE=3 SV=1: Radical_SAM: Mob_synth_C\tK03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]" }, { "name":"SOIL9_55010 molybdenum cofactor biosynthesis protein : Cyclic pyranopterin monophosphate synthase accessory protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=moaC PE=3 SV=1: MoaC\tK03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]" }, { "name":"SOIL9_69810 molybdopterin converting factor : Molybdopterin converting factor, large subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3710 PE=4 SV=1: MoaE\tK03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]" }, { "name":"SOIL9_49690 molybdopterin adenylyltransferase : Molybdopterin adenylyltransferase OS=Sulfurospirillum multivorans DSM 12446 GN=SMUL_1916 PE=4 SV=1: MoCF_biosynth\tK03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]" }, { "name":"SOIL9_66060 molybdenum cofactor synthesis domain protein : Molybdopterin biosynthesis protein MoeA OS=Blastopirellula marina DSM 3645 GN=DSM3645_09592 PE=4 SV=1: MoeA_N: MoCF_biosynth: MoeA_C\tK03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]" }, { "name":"SOIL9_71030 molybdenum cofactor biosynthesis protein : Uncharacterized protein OS=Sorangium cellulosum So0157-2 GN=SCE1572_52485 PE=4 SV=1: MoeA_N: MoCF_biosynth: MoeA_C\tK03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]" }, { "name":"SOIL9_60900 4-diphosphocytidyl-2C-methyl-D-erythritol synthase OS=Cystobacter violaceus Cb vi76 GN=Q664_46390 PE=4 SV=1: NTP_transf_3\tK07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]" }, { "name":"SOIL9_46670 molybdopterin-guanine dinucleotide biosynthesis protein a : Probable molybdenum cofactor guanylyltransferase OS=uncultured planctomycete GN=mobA PE=3 SV=1: NTP_transf_3\tK03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]" } ] }, { "name":"00670 One carbon pool by folate [PATH:gms00670]", "children":[ { "name":"SOIL9_16160 -methylene-tetrahydrofolate dehydrogenase : Bifunctional protein FolD OS=Rhodopirellula europaea 6C GN=folD PE=3 SV=1: THF_DHG_CYH: THF_DHG_CYH_C\tK01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) \/ methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]" }, { "name":"SOIL9_75900 Methylene tetrahydrofolate\/methylene tetrahydromethanopterin dehydrogenase-like protein OS=Gemmata sp. Wa1-1 GN=mtdA PE=4 SV=1: Mpt_N: NAD_binding_10\tK00300 mtdA; methylenetetrahydrofolate\/methylenetetrahydromethanopterin dehydrogenase (NADP+) [EC:1.5.1.5 1.5.1.-]" }, { "name":"SOIL9_10300 serine hydroxymethyltransferase : Serine hydroxymethyltransferase OS=Blastopirellula marina DSM 3645 GN=glyA PE=3 SV=1: SHMT\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" }, { "name":"SOIL9_72000 phosphoribosylglycinamide formyltransferase : Phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1572 PE=4 SV=1: Formyl_trans_N\tK11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]" }, { "name":"SOIL9_54710 purine biosynthesis protein purh : Bifunctional purine biosynthesis protein PurH OS=Desulfotomaculum ruminis (strain ATCC 23193 \/ DSM 2154 \/ NCIB 8452 \/ DL) GN=purH PE=3 SV=1: MGS: AICARFT_IMPCHas\tK00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase \/ IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]" }, { "name":"SOIL9_53400 glycine cleavage system t protein : Aminomethyltransferase OS=Planctomyces maris DSM 8797 GN=gcvT PE=3 SV=1: GCV_T: GCV_T_C\tK00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]" }, { "name":"SOIL9_75080 methionine synthase : Methionine synthase OS=Gloeobacter kilaueensis JS1 GN=metH PE=4 SV=1: S-methyl_trans: Pterin_bind: B12-binding_2: B12-binding: Met_synt_B12\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SOIL9_72500 fad-dependent thymidylate synthase : Thymidylate synthase ThyX OS=Frankia symbiont subsp. Datisca glomerata GN=thyX PE=3 SV=1: Thy1\tK03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]" }, { "name":"SOIL9_30760 formyltetrahydrofolate deformylase : Formyltetrahydrofolate deformylase OS=Nitrolancea hollandica Lb GN=purU PE=4 SV=1: ACT: Formyl_trans_N\tK01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]" }, { "name":"SOIL9_32570 -methylenetetrahydrofolate reductase : Methylenetetrahydrofolate reductase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2999 PE=3 SV=1: MTHFR\tK00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]" }, { "name":"SOIL9_22550 5-formyltetrahydrofolate cyclo-ligase : 5-formyltetrahydrofolate cyclo-ligase OS=Rhodopirellula europaea SH398 GN=RESH_04932 PE=3 SV=1: 5-FTHF_cyc-lig\tK01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]" }, { "name":"SOIL9_24120 s-adenosylmethionine synthetase : S-adenosylmethionine synthase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=metK PE=3 SV=1: S-AdoMet_synt_N: S-AdoMet_synt_M: S-AdoMet_synt_C\tK00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]" }, { "name":"SOIL9_34650 s-adenosyl-l-homocysteine hydrolase : Adenosylhomocysteinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ahcY PE=3 SV=1: AdoHcyase: AdoHcyase_NAD\tK01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]" }, { "name":"SOIL9_53380 glycine dehydrogenase subunit 1 : Probable glycine dehydrogenase (decarboxylating) subunit 1 OS=Blastopirellula marina DSM 3645 GN=gcvPA PE=3 SV=1: GDC-P\tK00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]" }, { "name":"SOIL9_53360 glycine dehydrogenase subunit 2 : Probable glycine dehydrogenase (decarboxylating) subunit 2 OS=uncultured planctomycete GN=gcvPB PE=3 SV=1: GDC-P\tK00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]" }, { "name":"SOIL9_55200 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4534 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_74420 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6538 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_29290 Glycine cleavage H-protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4504 PE=4 SV=1: GCV_H\tK02437 gcvH; glycine cleavage system H protein" }, { "name":"SOIL9_53390 glycine cleavage system protein h : Glycine cleavage system H protein OS=Planctomyces maris DSM 8797 GN=gcvH PE=3 SV=1: GCV_H\tK02437 gcvH; glycine cleavage system H protein" }, { "name":"SOIL9_00760 cystathionine beta-synthase : Cystathionine beta-synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7195 PE=4 SV=1: PALP: CBS\tK01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]" }, { "name":"SOIL9_23980 cystathionine beta-synthase : Pyridoxal-5'-phosphate-dependent enzyme, beta subunit OS=Plesiocystis pacifica SIR-1 GN=PPSIR1_00752 PE=4 SV=1: PALP\tK01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]" }, { "name":"SOIL9_56280 cystathionine beta-lyase : Cystathionine beta-lyase\/cystathionine gamma-synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7194 PE=3 SV=1: Cys_Met_Meta_PP\tK01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]" } ] }, { "name":"00830 Retinol metabolism" }, { "name":"00860 Porphyrin metabolism [PATH:gms00860]", "children":[ { "name":"SOIL9_05650 glutamyl-q trna ligase : Glutamyl-or glutaminyl-tRNA synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1159 PE=3 SV=1: tRNA-synt_1c\tK01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]" }, { "name":"SOIL9_07070 glutamyl-trna reductase : Glutamyl-tRNA reductase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=hemA PE=3 SV=1: GlutR_N: Shikimate_DH: GlutR_dimer\tK02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]" }, { "name":"SOIL9_17110 glutamate-1-semialdehyde aminotransferase : Glutamate-1-semialdehyde 2,1-aminomutase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=hemL PE=3 SV=1: Aminotran_3\tK01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]" }, { "name":"SOIL9_31160 glutamate-1-semialdehyde -aminomutase : Glutamate-1-semialdehyde 2,1-aminomutase, putative OS=Planctomyces maris DSM 8797 GN=PM8797T_22388 PE=3 SV=1: Aminotran_3\tK01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]" }, { "name":"SOIL9_11820 delta-aminolevulinic acid dehydratase : Delta-aminolevulinic acid dehydratase OS=uncultured planctomycete GN=HGMM_F13D05C09 PE=3 SV=1: ALAD\tK01698 hemB; porphobilinogen synthase [EC:4.2.1.24]" }, { "name":"SOIL9_16080 porphobilinogen deaminase : Porphobilinogen deaminase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=hemC PE=3 SV=1: Porphobil_deam: Porphobil_deamC\tK01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]" }, { "name":"SOIL9_19310 uroporphyrinogen decarboxylase : Uroporphyrinogen decarboxylase OS=Halovivax ruber (strain DSM 18193 \/ JCM 13892 \/ XH-70) GN=hemE PE=3 SV=1: URO-D\tK01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]" }, { "name":"SOIL9_72270 coproporphyrinogen iii oxidase : Coproporphyrinogen oxidase OS=Myxococcus sp. (contaminant ex DSM 436) GN=A176_01879 PE=4 SV=1: Coprogen_oxidas\tK00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]" }, { "name":"SOIL9_80400 protoporphyrinogen oxidase : Protoporphyrinogen oxidase OS=Geobacter metallireducens (strain GS-15 \/ ATCC 53774 \/ DSM 7210) GN=hemY PE=4 SV=2: Amino_oxidase\tK00231 PPOX; protoporphyrinogen\/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]" }, { "name":"SOIL9_50650 ferrochelatase : Ferrochelatase OS=Mesorhizobium sp. L2C084A000 GN=hemH PE=3 SV=1: Ferrochelatase\tK01772 hemH; protoporphyrin\/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]" }, { "name":"SOIL9_34110 uroporphyrin-iii c-methyltransferase : Uroporphyrin-III C-methyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6071 PE=3 SV=1: TP_methylase: HEM4\tK13542 cobA-hemD; uroporphyrinogen III methyltransferase \/ synthase [EC:2.1.1.107 4.2.1.75]" }, { "name":"SOIL9_67640 uroporphyrinogen-iii c-methyltransferase : Uroporphyrinogen-III C-methyltransferase OS=Bacillus cereus BAG1X1-1 GN=ICC_04124 PE=3 SV=1: TP_methylase\tK02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]" }, { "name":"SOIL9_64490 siroheme synthase : Siroheme synthase OS=Thermincola potens (strain JR) GN=TherJR_1133 PE=4 SV=1: NAD_binding_7: Sirohm_synth_M\tK24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]" }, { "name":"SOIL9_75870 cobalamin (vitamin b12) biosynthesis protein : Cobalamin (Vitamin B12) biosynthesis CbiX protein OS=Planctomyces maris DSM 8797 GN=PM8797T_06782 PE=4 SV=1: CbiX\tK03794 sirB; sirohydrochlorin ferrochelatase [EC:4.99.1.4]" }, { "name":"SOIL9_53560 protoheme ix farnesyltransferase : Protoheme IX farnesyltransferase OS=Solibacter usitatus (strain Ellin6076) GN=ctaB PE=3 SV=1: UbiA\tK02257 COX10; heme o synthase [EC:2.5.1.141]" }, { "name":"SOIL9_53570 Cytochrome oxidase assembly OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_2264 PE=4 SV=1: COX15-CtaA: COX15-CtaA\tK02259 COX15; heme a synthase [EC:1.17.99.9]" }, { "name":"SOIL9_11050 protoporphyrin ix magnesium chelatase : Cobaltochelatase OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_2831 PE=4 SV=1: CobN-Mg_chel\tK02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]" }, { "name":"SOIL9_62490 cob yrinic acid -diamide adenosyltransferase : ATP--cobalamin adenosyltransferase OS=Nitrospirillum amazonense Y2 GN=AZA_43864 PE=4 SV=1: Cob_adeno_trans\tK00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]" }, { "name":"SOIL9_48980 Uncharacterized protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2429 PE=4 SV=1\tK02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]" }, { "name":"SOIL9_31170 Magnesium protoporphyrin chelatase, putative OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_1905 PE=4 SV=1\tK03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]" }, { "name":"SOIL9_31930 bacterioferritin : Bacterioferritin OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3758 PE=3 SV=1: Ferritin\tK03594 bfr; bacterioferritin [EC:1.16.3.1]" }, { "name":"SOIL9_18380 unnamed protein product; BLAST_uniprot: no_hits\tK22336 bfrB; bacterioferritin B [EC:1.16.3.1]" } ] }, { "name":"00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:gms00130]", "children":[ { "name":"SOIL9_65410 4-hydroxybenzoate polyprenyltransferase : 4-hydroxybenzoate octaprenyltransferase OS=Blastopirellula marina DSM 3645 GN=DSM3645_22029 PE=4 SV=1: UbiA\tK03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]" }, { "name":"SOIL9_12790 3-octaprenyl-4-hydroxybenzoate carboxy-lyase : 3-polyprenyl-4-hydroxybenzoate decarboxylase-like protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1695 PE=4 SV=1: UbiD: UbiD\tK03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]" }, { "name":"SOIL9_29930 3-octaprenyl-4-hydroxybenzoate carboxy-lyase : 3-octaprenyl-4-hydroxybenzoate carboxy-lyase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1506 PE=4 SV=1: Flavoprotein\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]" }, { "name":"SOIL9_19320 ubiquinone menaquinone biosynthesis methyltransferase : Demethylmenaquinone methyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=menG PE=3 SV=1: Ubie_methyltran\tK03183 ubiE; demethylmenaquinone methyltransferase \/ 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]" }, { "name":"SOIL9_68400 protein containing duf178 : Hypothetical conserved protein OS=uncultured planctomycete GN=HGMM_F11G08C18 PE=4 SV=1: VitK2_biosynth\tK11782 mqnA; chorismate dehydratase [EC:4.2.1.151]" }, { "name":"SOIL9_76670 radical sam domain-containing protein : Putative menaquinone biosynthesis protein, SCO4494 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1135 PE=4 SV=1: Radical_SAM\tK18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]" }, { "name":"SOIL9_00390 amidohydrolase : Amidohydrolase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1172 PE=4 SV=1: Amidohydro_1\tK20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40]" }, { "name":"SOIL9_68390 radical sam domain-containing protein : Hypothetical conserved protein OS=uncultured planctomycete GN=HGMM_F11G08C19 PE=4 SV=1: Radical_SAM\tK11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]" }, { "name":"SOIL9_58230 abc transporter substrate-binding protein : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_12568 PE=4 SV=1: VitK2_biosynth\tK11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29]" }, { "name":"SOIL9_73470 nadph-dependent fmn reductase : NADPH-dependent FMN reductase OS=Tolypothrix bouteillei VB521301 GN=DA73_11640 PE=4 SV=1: FMN_red\tK03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]" }, { "name":"SOIL9_85540 nadph-dependent fmn reductase : Uncharacterized protein OS=Sorangium cellulosum So0157-2 GN=SCE1572_04965 PE=4 SV=1: FMN_red\tK03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]" }, { "name":"SOIL9_61740 4-hydroxyphenylpyruvate dioxygenase : 4-hydroxyphenylpyruvate dioxygenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1068 PE=3 SV=1: Glyoxalase: Glyoxalase\tK00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]" } ] } ] }, { "name":"09109 Metabolism of terpenoids and polyketides", "children":[ { "name":"00900 Terpenoid backbone biosynthesis [PATH:gms00900]", "children":[ { "name":"SOIL9_66120 1-deoxy-d-xylulose-5-phosphate synthase : 1-deoxy-D-xylulose-5-phosphate synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=dxs PE=3 SV=1: DXP_synthase_N: Transket_pyr: Transketolase_C\tK01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]" }, { "name":"SOIL9_72900 1-deoxy-d-xylulose 5-phosphate reductoisomerase : 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Planctomyces maris DSM 8797 GN=dxr PE=3 SV=1: DXP_reductoisom: DXP_redisom_C: DXPR_C\tK00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]" }, { "name":"SOIL9_22430 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase : 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ispD PE=3 SV=1: IspD\tK00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]" }, { "name":"SOIL9_77020 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase : 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ispE PE=3 SV=1: GHMP_kinases_N: GHMP_kinases_C\tK00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]" }, { "name":"SOIL9_69850 2-c-methyl-d-erythritol -cyclodiphosphate synthase : 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Neisseria sicca ATCC 29256 GN=ispF PE=3 SV=1: YgbB\tK01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]" }, { "name":"SOIL9_07800 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase : 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ispG PE=3 SV=1: GcpE\tK03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]" }, { "name":"SOIL9_21760 4-hydroxy-3-methylbut-2-enyl diphosphate reductase : 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=ispH PE=3 SV=1: LYTB\tK03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]" }, { "name":"SOIL9_50660 acetyl-acetyltransferase : Acetyl-CoA acetyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6120 PE=3 SV=1: Thiolase_N: Thiolase_C\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SOIL9_33620 mevalonate kinase : Marine sediment metagenome DNA, contig: S01H1_S08262 (Fragment) OS=marine sediment metagenome GN=S01H1_36735 PE=4 SV=1: GHMP_kinases_N: GHMP_kinases_C\tK00869 MVK; mevalonate kinase [EC:2.7.1.36]" }, { "name":"SOIL9_29930 3-octaprenyl-4-hydroxybenzoate carboxy-lyase : 3-octaprenyl-4-hydroxybenzoate carboxy-lyase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1506 PE=4 SV=1: Flavoprotein\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]" }, { "name":"SOIL9_66110 farnesyl-diphosphate synthase : Polyprenyl synthetase OS=Planctomyces maris DSM 8797 GN=PM8797T_17514 PE=3 SV=1: polyprenyl_synt\tK13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]" }, { "name":"SOIL9_55000 polyprenyl synthetase : Polyprenyl synthetase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3133 PE=3 SV=1: polyprenyl_synt\tK02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]" }, { "name":"SOIL9_40790 udp pyrophosphate synthase : Isoprenyl transferase OS=Blastopirellula marina DSM 3645 GN=DSM3645_07730 PE=3 SV=1: Prenyltransf\tK00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]" }, { "name":"SOIL9_75310 peptidase m48 ste24p : Tetratricopeptide repeat domain protein OS=uncultured planctomycete GN=HGMM_F01A04C25 PE=4 SV=1: Peptidase_M48\tK06013 STE24; STE24 endopeptidase [EC:3.4.24.84]" } ] }, { "name":"00902 Monoterpenoid biosynthesis" }, { "name":"00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:gms00909]", "children":[ { "name":"SOIL9_22870 monooxygenase family protein : Squalene epoxidase OS=Prochloron didemni P2-Fiji GN=terF PE=4 SV=1: SE\tK00511 SQLE; squalene monooxygenase [EC:1.14.14.17]" }, { "name":"SOIL9_23180 Squalene-hopene cyclase OS=Chthonomonas calidirosea (strain DSM 23976 \/ ICMP 18418 \/ T49) GN=CCALI_01615 PE=4 SV=1: Prenyltrans_1: Prenyltrans_2\tK06045 shc; squalene-hopene\/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129]" }, { "name":"SOIL9_23870 squalene-hopene cyclase : Probable squalene-hopene cyclase OS=Planctomyces maris DSM 8797 GN=PM8797T_19949 PE=4 SV=1: Prenyltrans_1: Prenyltrans_1\tK06045 shc; squalene-hopene\/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129]" } ] }, { "name":"00904 Diterpenoid biosynthesis" }, { "name":"00906 Carotenoid biosynthesis [PATH:gms00906]", "children":[ { "name":"SOIL9_76020 phytoene synthase : Phytoene\/squalene synthetase OS=Chthonomonas calidirosea (strain DSM 23976 \/ ICMP 18418 \/ T49) GN=CCALI_01286 PE=4 SV=1: SQS_PSY\tK02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]" }, { "name":"SOIL9_30640 phytoene desaturase : Phytoene desaturase OS=Candidatus Entotheonella sp. TSY1 GN=ETSY1_19775 PE=4 SV=1: Amino_oxidase\tK10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]" }, { "name":"SOIL9_50460 mgt family : Glycosyltransferase, MGT family OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_2505 PE=4 SV=1: UDPGT\tK14596 crtX; zeaxanthin glucosyltransferase [EC:2.4.1.276]" }, { "name":"SOIL9_30650 phytoene desaturase : Putative phytoene desaturase OS=Azospirillum lipoferum (strain 4B) GN=AZOLI_p10672 PE=4 SV=1: Amino_oxidase\tK10210 crtP; diapolycopene oxygenase [EC:1.14.99.44]" } ] }, { "name":"00905 Brassinosteroid biosynthesis" }, { "name":"00981 Insect hormone biosynthesis" }, { "name":"00908 Zeatin biosynthesis" }, { "name":"00903 Limonene degradation", "children":[ { "name":"SOIL9_59540 betaine-aldehyde dehydrogenase : Aldehyde dehydrogenase (Acceptor) OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_2599 PE=3 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_82990 aldehyde dehydrogenase : Aldehyde dehydrogenase OS=uncultured planctomycete GN=HGMM_F16E03C18 PE=4 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" } ] }, { "name":"00907 Pinene, camphor and geraniol degradation [PATH:gms00907]", "children":[ { "name":"SOIL9_73480 alcohol dehydrogenase : Zinc-containing alcohol dehydrogenase superfamily protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_08987 PE=3 SV=1: ADH_N: ADH_zinc_N\tK12957 ahr; alcohol\/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]" } ] }, { "name":"01052 Type I polyketide structures" }, { "name":"00522 Biosynthesis of 12-, 14- and 16-membered macrolides" }, { "name":"01051 Biosynthesis of ansamycins", "children":[ { "name":"SOIL9_74760 transketolase : Transketolase OS=Granulibacter bethesdensis CGDNIH3 GN=GbCGDNIH3_0856 PE=4 SV=1: Transketolase_N: Transket_pyr: Transketolase_C\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" } ] }, { "name":"01059 Biosynthesis of enediyne antibiotics [PATH:gms01059]", "children":[ { "name":"SOIL9_13590 Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_22088 PE=4 SV=1: VCBS: VCBS: UnbV_ASPIC\tK21162 sgcE4; enediyne biosynthesis protein E4" }, { "name":"SOIL9_20850 ASPIC and UnbV.\/Family description OS=Chthonomonas calidirosea (strain DSM 23976 \/ ICMP 18418 \/ T49) GN=CCALI_01314 PE=4 SV=1: VCBS: VCBS: UnbV_ASPIC\tK21162 sgcE4; enediyne biosynthesis protein E4" }, { "name":"SOIL9_20840 Uncharacterized protein OS=Chthonomonas calidirosea (strain DSM 23976 \/ ICMP 18418 \/ T49) GN=CCALI_01313 PE=4 SV=1: NQR2_RnfD_RnfE\tK21163 sgcE5; enediyne biosynthesis protein E5" } ] }, { "name":"01056 Biosynthesis of type II polyketide backbone" }, { "name":"01057 Biosynthesis of type II polyketide products", "children":[ { "name":"SOIL9_20870 Putative halogenase OS=Planctomyces maris DSM 8797 GN=PM8797T_27025 PE=4 SV=1\tK14257 ctcP; tetracycline 7-halogenase \/ FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-]" } ] }, { "name":"00253 Tetracycline biosynthesis", "children":[ { "name":"SOIL9_20870 Putative halogenase OS=Planctomyces maris DSM 8797 GN=PM8797T_27025 PE=4 SV=1\tK14257 ctcP; tetracycline 7-halogenase \/ FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-]" } ] }, { "name":"00523 Polyketide sugar unit biosynthesis [PATH:gms00523]", "children":[ { "name":"SOIL9_82930 spore coat protein : Marine sediment metagenome DNA, contig: S06H3_S06419 OS=marine sediment metagenome GN=S06H3_34823 PE=4 SV=1: NTP_transferase\tK00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]" }, { "name":"SOIL9_38270 dtdp-glucose -dehydratase : Marine sediment metagenome DNA, contig: S01H1_L05958 OS=marine sediment metagenome GN=S01H1_14926 PE=4 SV=1: Epimerase\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"SOIL9_72580 nad-dependent dehydratase : NAD-dependent epimerase\/dehydratase OS=Rhodothermus marinus (strain ATCC 43812 \/ DSM 4252 \/ R-10) GN=Rmar_1858 PE=4 SV=1: Epimerase\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"SOIL9_82940 spore coat protein : dTDP-glucose 4,6-dehydratase OS=Planctomyces maris DSM 8797 GN=PM8797T_31915 PE=3 SV=1: Epimerase\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"SOIL9_26660 dtdp-4-dehydrorhamnose -epimerase : dTDP-4-dehydrorhamnose 35-epimerase related protein OS=Geobacter sp. (strain M18) GN=GM18_2321 PE=4 SV=1: dTDP_sugar_isom\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]" }, { "name":"SOIL9_49970 dtdp-4-dehydrorhamnose -epimerase : dTDP-4-dehydrorhamnose 3,5-epimerase OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3401 PE=4 SV=1: dTDP_sugar_isom\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]" }, { "name":"SOIL9_41760 dTDP-4-dehydrorhamnose reductase OS=uncultured planctomycete GN=HGMM_F01A04C04 PE=4 SV=1: RmlD_sub_bind\tK00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]" } ] }, { "name":"01054 Nonribosomal peptide structures" }, { "name":"01053 Biosynthesis of siderophore group nonribosomal peptides" }, { "name":"01055 Biosynthesis of vancomycin group antibiotics", "children":[ { "name":"SOIL9_38270 dtdp-glucose -dehydratase : Marine sediment metagenome DNA, contig: S01H1_L05958 OS=marine sediment metagenome GN=S01H1_14926 PE=4 SV=1: Epimerase\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"SOIL9_72580 nad-dependent dehydratase : NAD-dependent epimerase\/dehydratase OS=Rhodothermus marinus (strain ATCC 43812 \/ DSM 4252 \/ R-10) GN=Rmar_1858 PE=4 SV=1: Epimerase\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"SOIL9_82940 spore coat protein : dTDP-glucose 4,6-dehydratase OS=Planctomyces maris DSM 8797 GN=PM8797T_31915 PE=3 SV=1: Epimerase\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" } ] } ] }, { "name":"09110 Biosynthesis of other secondary metabolites", "children":[ { "name":"00940 Phenylpropanoid biosynthesis" }, { "name":"00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis" }, { "name":"00941 Flavonoid biosynthesis" }, { "name":"00944 Flavone and flavonol biosynthesis" }, { "name":"00942 Anthocyanin biosynthesis" }, { "name":"00943 Isoflavonoid biosynthesis" }, { "name":"00946 Degradation of flavonoids" }, { "name":"00901 Indole alkaloid biosynthesis" }, { "name":"00403 Indole diterpene alkaloid biosynthesis" }, { "name":"00950 Isoquinoline alkaloid biosynthesis" }, { "name":"00960 Tropane, piperidine and pyridine alkaloid biosynthesis" }, { "name":"00996 Biosynthesis of various alkaloids" }, { "name":"00232 Caffeine metabolism" }, { "name":"00965 Betalain biosynthesis" }, { "name":"00966 Glucosinolate biosynthesis" }, { "name":"00402 Benzoxazinoid biosynthesis" }, { "name":"00311 Penicillin and cephalosporin biosynthesis [PATH:gms00311]", "children":[ { "name":"SOIL9_20600 aminotransferase class v : Isopenicillin N epimerase OS=Amycolatopsis lactamdurans GN=cefD PE=3 SV=1: Aminotran_5: Aminotran_5\tK04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17]" }, { "name":"SOIL9_57180 peptidase s45 penicillin amidase : Penicillin acylase II OS=Thermomicrobium roseum (strain ATCC 27502 \/ DSM 5159 \/ P-2) GN=trd_1119 PE=4 SV=1: Penicil_amidase\tK01434 pac; penicillin G amidase [EC:3.5.1.11]" } ] }, { "name":"00332 Carbapenem biosynthesis [PATH:gms00332]", "children":[ { "name":"SOIL9_34290 glutamate 5-kinase : Glutamate 5-kinase OS=Planctomyces maris DSM 8797 GN=proB PE=3 SV=1: AA_kinase: PUA\tK00931 proB; glutamate 5-kinase [EC:2.7.2.11]" }, { "name":"SOIL9_34390 gamma-glutamyl phosphate reductase : Gamma-glutamyl phosphate reductase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=proA PE=3 SV=1: Aldedh\tK00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]" } ] }, { "name":"00261 Monobactam biosynthesis [PATH:gms00261]", "children":[ { "name":"SOIL9_42720 bifunctional sulfate adenylyltransferase subunit 1 adenylylsulfate kinase protein : Sulfate adenylyltransferase subunit 1 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=cysN PE=3 SV=1: GTP_EFTU: GTP_EFTU_D2: APS_kinase\tK00955 cysNC; bifunctional enzyme CysN\/CysC [EC:2.7.7.4 2.7.1.25]" }, { "name":"SOIL9_42740 sulfate adenylyltransferase subunit 2 : Sulfate adenylyltransferase subunit 2 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=cysD PE=3 SV=1: PAPS_reduct\tK00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]" }, { "name":"SOIL9_30270 aspartate kinase : Aspartokinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5942 PE=3 SV=1: AA_kinase: ACT: ACT_7: ACT\tK00928 lysC; aspartate kinase [EC:2.7.2.4]" }, { "name":"SOIL9_59370 aspartate-semialdehyde dehydrogenase : Aspartate-semialdehyde dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=asd PE=3 SV=1: Semialdhyde_dh: Semialdhyde_dhC\tK00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]" }, { "name":"SOIL9_10780 dihydrodipicolinate synthase : Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_14925 PE=3 SV=1: DHDPS\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"SOIL9_54760 dihydrodipicolinate synthase : 4-hydroxy-tetrahydrodipicolinate synthase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=dapA PE=3 SV=1: DHDPS\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"SOIL9_03010 dihydrodipicolinate reductase : 4-hydroxy-tetrahydrodipicolinate reductase OS=Planctomyces maris DSM 8797 GN=dapB PE=3 SV=1: DapB_N: DapB_C\tK00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]" } ] }, { "name":"00331 Clavulanic acid biosynthesis" }, { "name":"00521 Streptomycin biosynthesis [PATH:gms00521]", "children":[ { "name":"SOIL9_18500 Transcriptional regulator\/sugar kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2932 PE=4 SV=1: ROK\tK25026 glk; glucokinase [EC:2.7.1.2]" }, { "name":"SOIL9_18530 ROK family protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2979 PE=4 SV=1: ROK\tK25026 glk; glucokinase [EC:2.7.1.2]" }, { "name":"SOIL9_83660 glucokinase xylose repressor : Transcriptional regulator\/sugar kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6144 PE=4 SV=1: ROK\tK25026 glk; glucokinase [EC:2.7.1.2]" }, { "name":"SOIL9_08810 phosphoglucomutase : Phosphoglucomutase OS=Rhodovulum sp. PH10 GN=A33M_3475 PE=3 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III: PGM_PMM_IV\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"SOIL9_23680 phosphoglucomutase : Phosphoglucomutase OS=Rhodovulum sp. PH10 GN=A33M_3475 PE=3 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III: PGM_PMM_IV\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"SOIL9_27840 phosphoglucomutase : Uncharacterized protein OS=Candidatus Entotheonella sp. TSY2 GN=ETSY2_36385 PE=4 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"SOIL9_06780 myo-inositol-1-phosphate synthase : Myo-inositol-1-phosphate synthase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3018 PE=4 SV=1: NAD_binding_5: Inos-1-P_synth\tK01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]" }, { "name":"SOIL9_66500 inositol-1-monophosphatase : Inositol monophosphatase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4686 PE=4 SV=1: Inositol_P\tK01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]" }, { "name":"SOIL9_82930 spore coat protein : Marine sediment metagenome DNA, contig: S06H3_S06419 OS=marine sediment metagenome GN=S06H3_34823 PE=4 SV=1: NTP_transferase\tK00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]" }, { "name":"SOIL9_38270 dtdp-glucose -dehydratase : Marine sediment metagenome DNA, contig: S01H1_L05958 OS=marine sediment metagenome GN=S01H1_14926 PE=4 SV=1: Epimerase\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"SOIL9_72580 nad-dependent dehydratase : NAD-dependent epimerase\/dehydratase OS=Rhodothermus marinus (strain ATCC 43812 \/ DSM 4252 \/ R-10) GN=Rmar_1858 PE=4 SV=1: Epimerase\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"SOIL9_82940 spore coat protein : dTDP-glucose 4,6-dehydratase OS=Planctomyces maris DSM 8797 GN=PM8797T_31915 PE=3 SV=1: Epimerase\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"SOIL9_26660 dtdp-4-dehydrorhamnose -epimerase : dTDP-4-dehydrorhamnose 35-epimerase related protein OS=Geobacter sp. (strain M18) GN=GM18_2321 PE=4 SV=1: dTDP_sugar_isom\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]" }, { "name":"SOIL9_49970 dtdp-4-dehydrorhamnose -epimerase : dTDP-4-dehydrorhamnose 3,5-epimerase OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3401 PE=4 SV=1: dTDP_sugar_isom\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]" }, { "name":"SOIL9_41760 dTDP-4-dehydrorhamnose reductase OS=uncultured planctomycete GN=HGMM_F01A04C04 PE=4 SV=1: RmlD_sub_bind\tK00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]" } ] }, { "name":"00524 Neomycin, kanamycin and gentamicin biosynthesis", "children":[ { "name":"SOIL9_18500 Transcriptional regulator\/sugar kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2932 PE=4 SV=1: ROK\tK25026 glk; glucokinase [EC:2.7.1.2]" }, { "name":"SOIL9_18530 ROK family protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2979 PE=4 SV=1: ROK\tK25026 glk; glucokinase [EC:2.7.1.2]" }, { "name":"SOIL9_83660 glucokinase xylose repressor : Transcriptional regulator\/sugar kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6144 PE=4 SV=1: ROK\tK25026 glk; glucokinase [EC:2.7.1.2]" } ] }, { "name":"00525 Acarbose and validamycin biosynthesis [PATH:gms00525]", "children":[ { "name":"SOIL9_82930 spore coat protein : Marine sediment metagenome DNA, contig: S06H3_S06419 OS=marine sediment metagenome GN=S06H3_34823 PE=4 SV=1: NTP_transferase\tK00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]" }, { "name":"SOIL9_38270 dtdp-glucose -dehydratase : Marine sediment metagenome DNA, contig: S01H1_L05958 OS=marine sediment metagenome GN=S01H1_14926 PE=4 SV=1: Epimerase\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"SOIL9_72580 nad-dependent dehydratase : NAD-dependent epimerase\/dehydratase OS=Rhodothermus marinus (strain ATCC 43812 \/ DSM 4252 \/ R-10) GN=Rmar_1858 PE=4 SV=1: Epimerase\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"SOIL9_82940 spore coat protein : dTDP-glucose 4,6-dehydratase OS=Planctomyces maris DSM 8797 GN=PM8797T_31915 PE=3 SV=1: Epimerase\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" } ] }, { "name":"00401 Novobiocin biosynthesis [PATH:gms00401]", "children":[ { "name":"SOIL9_21630 aspartate aminotransferase : Aspartate aminotransferase OS=uncultured planctomycete GN=HGMM_F11G08C24 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_51030 aspartate aminotransferase : Aspartate\/tyrosine\/aromatic aminotransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3297 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_69580 aspartate aminotransferase : Aminotransferase, class I and II OS=Planctomyces maris DSM 8797 GN=PM8797T_14147 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_37540 histidinol-phosphate aminotransferase : Histidinol-phosphate aminotransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=hisC PE=3 SV=1: Aminotran_1_2\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" } ] }, { "name":"00404 Staurosporine biosynthesis", "children":[ { "name":"SOIL9_20870 Putative halogenase OS=Planctomyces maris DSM 8797 GN=PM8797T_27025 PE=4 SV=1\tK14257 ctcP; tetracycline 7-halogenase \/ FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-]" } ] }, { "name":"00405 Phenazine biosynthesis", "children":[ { "name":"SOIL9_59570 anthranilate synthase component i : Anthranilate synthase component I OS=Planctomyces maris DSM 8797 GN=PM8797T_19864 PE=4 SV=1: Anth_synt_I_N: Chorismate_bind\tK01657 trpE; anthranilate synthase component I [EC:4.1.3.27]" } ] }, { "name":"00333 Prodigiosin biosynthesis", "children":[ { "name":"SOIL9_62320 malonyl -acyl carrier protein transacylase : Malonyl CoA-acyl carrier protein transacylase OS=uncultured Acidobacteria bacterium A2 PE=3 SV=1: Acyl_transf_1\tK00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]" }, { "name":"SOIL9_04740 3-ketoacyl-acp reductase : Short-chain dehydrogenase\/reductase SDR OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_5617 PE=3 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_06020 3-oxoacyl-acp reductase : Short-chain dehydrogenase\/reductase SDR OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_6588 PE=3 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_09470 short-chain dehydrogenase reductase sdr : Short-chain dehydrogenase\/reductase SDR OS=Pseudomonas viridiflava UASWS0038 GN=AAI_04629 PE=3 SV=1: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_12530 oxidoreductase : Short-chain dehydrogenase OS=Bradyrhizobium japonicum SEMIA 5079 GN=BJS_02062 PE=4 SV=1: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_12540 oxidoreductase : Oxidoreductase OS=Calothrix sp. 336\/3 GN=IJ00_10970 PE=3 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_24270 3-ketoacyl-acp reductase : 3-oxoacyl-[acyl-carrier-protein] reductase protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_05944 PE=3 SV=1: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_32060 oxidoreductase : 3-oxoacyl-(Acyl-carrier-protein) reductase OS=Granulicella mallensis (strain ATCC BAA-1857 \/ DSM 23137 \/ MP5ACTX8) GN=AciX8_0105 PE=4 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_35470 oxidoreductase : Oxidoreductase OS=Burkholderia grimmiae GN=BG57_27380 PE=4 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_72190 3-oxoacyl-(acyl-carrier-protein) reductase : 3-oxoacyl-(Acyl-carrier protein) reductase OS=Planctomyces maris DSM 8797 GN=PM8797T_12848 PE=3 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_75490 3-oxoacyl-acp reductase : Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1242 PE=4 SV=1: HPPK: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_77780 oxidoreductase : Putative short-chain dehydrogenase OS=Planctomyces maris DSM 8797 GN=PM8797T_09224 PE=3 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_79360 short-chain dehydrogenase : 3-oxoacyl-(Acyl-carrier-protein) reductase OS=Runella slithyformis (strain ATCC 29530 \/ DSM 19594 \/ LMG 11500 \/ NCIMB 11436 \/ LSU 4) GN=Runsl_1409 PE=4 SV=1: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_79600 short-chain dehydrogenase : Short chain dehydrogenase family protein OS=Mesorhizobium huakuii 7653R GN=fabG20 PE=3 SV=1: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_81440 oxidoreductase : Oxidoreductase OS=Burkholderia grimmiae GN=BG57_27380 PE=4 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_50820 enoyl-: Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02448 PE=4 SV=1: adh_short_C2\tK00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]" } ] }, { "name":"00254 Aflatoxin biosynthesis" }, { "name":"00975 Biosynthesis of various siderophores" }, { "name":"00998 Biosynthesis of various antibiotics", "children":[ { "name":"SOIL9_54110 Acyl carrier protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5566 PE=4 SV=1: PP-binding\tK02078 acpP; acyl carrier protein" }, { "name":"SOIL9_62310 acyl carrier protein : Acyl carrier protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=acpP PE=3 SV=1: PP-binding\tK02078 acpP; acyl carrier protein" }, { "name":"SOIL9_72180 acyl carrier protein : Acyl carrier protein OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=acpP PE=3 SV=1: PP-binding\tK02078 acpP; acyl carrier protein" } ] }, { "name":"00999 Biosynthesis of various plant secondary metabolites [PATH:gms00999]", "children":[ { "name":"SOIL9_24120 s-adenosylmethionine synthetase : S-adenosylmethionine synthase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=metK PE=3 SV=1: S-AdoMet_synt_N: S-AdoMet_synt_M: S-AdoMet_synt_C\tK00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]" }, { "name":"SOIL9_37640 3-dehydroquinate dehydratase : Shikimate dehydrogenase (NADP(+)) OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4018 PE=3 SV=1: DHquinase_I: Shikimate_dh_N: Shikimate_DH\tK13832 aroDE; 3-dehydroquinate dehydratase \/ shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]" } ] }, { "name":"00997 Biosynthesis of various other secondary metabolites" } ] }, { "name":"09111 Xenobiotics biodegradation and metabolism", "children":[ { "name":"00362 Benzoate degradation [PATH:gms00362]", "children":[ { "name":"SOIL9_38760 mandelate racemase muconate lactonizing protein : Mandelate racemase\/muconate lactonizing protein OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD4472 PE=4 SV=1: MR_MLE_N: MR_MLE_C\tK01856 catB; muconate cycloisomerase [EC:5.5.1.1]" }, { "name":"SOIL9_79350 2-hydroxymuconic semialdehyde dehydrogenase : 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase OS=Fulvivirga imtechensis AK7 GN=C900_03217 PE=3 SV=1: Aldedh\tK10217 dmpC; aminomuconate-semialdehyde\/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]" }, { "name":"SOIL9_72730 4-oxalocrotonate tautomerase : 4-oxalocrotonate tautomerase family enzyme OS=Pseudomonas sp. GM49 GN=PMI29_05548 PE=4 SV=1: Tautomerase\tK01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]" }, { "name":"SOIL9_66480 intradiol ring-cleavage dioxygenase : Intradiol ring-cleavage dioxygenase OS=Rhodopirellula baltica WH47 GN=RBWH47_04345 PE=4 SV=1: Dioxygenase_C\tK00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]" }, { "name":"SOIL9_77080 intradiol ring-cleavage dioxygenase : Protocatechuate 3,4-dioxygenase beta subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5427 PE=4 SV=1: Dioxygenase_C\tK00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]" }, { "name":"SOIL9_68300 2fe-2s ferredoxin : 2Fe-2S ferredoxin OS=Candidatus Nitrospira defluvii GN=fdxB PE=4 SV=1: Fer2\tK04755 fdx; ferredoxin, 2Fe-2S" }, { "name":"SOIL9_50660 acetyl-acetyltransferase : Acetyl-CoA acetyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6120 PE=3 SV=1: Thiolase_N: Thiolase_C\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" } ] }, { "name":"00627 Aminobenzoate degradation [PATH:gms00627]", "children":[ { "name":"SOIL9_79060 nitrilase : Nitrilase OS=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 GN=ABENE_22140 PE=4 SV=1: CN_hydrolase: ACT_7\tK01501 E3.5.5.1; nitrilase [EC:3.5.5.1]" }, { "name":"SOIL9_31390 acylphosphatase : Acylphosphatase OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_1202 PE=3 SV=1: Acylphosphatase\tK01512 acyP; acylphosphatase [EC:3.6.1.7]" }, { "name":"SOIL9_29930 3-octaprenyl-4-hydroxybenzoate carboxy-lyase : 3-octaprenyl-4-hydroxybenzoate carboxy-lyase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1506 PE=4 SV=1: Flavoprotein\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]" } ] }, { "name":"00364 Fluorobenzoate degradation [PATH:gms00364]", "children":[ { "name":"SOIL9_03620 dienelactone hydrolase : Dienelactone hydrolase OS=Granulicella mallensis (strain ATCC BAA-1857 \/ DSM 23137 \/ MP5ACTX8) GN=AciX8_2614 PE=4 SV=1: DLH\tK01061 clcD; carboxymethylenebutenolidase [EC:3.1.1.45]" }, { "name":"SOIL9_56170 carboxymethylenebutenolidase : Dienelactone hydrolase-like enzyme OS=Microcoleus sp. PCC 7113 GN=Mic7113_4358 PE=4 SV=1: DLH\tK01061 clcD; carboxymethylenebutenolidase [EC:3.1.1.45]" }, { "name":"SOIL9_60580 dienelactone hydrolase : Putative uncharacterized protein OS=Rhodopirellula baltica (strain SH1) GN=RB4286 PE=4 SV=1: DLH\tK01061 clcD; carboxymethylenebutenolidase [EC:3.1.1.45]" }, { "name":"SOIL9_38760 mandelate racemase muconate lactonizing protein : Mandelate racemase\/muconate lactonizing protein OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD4472 PE=4 SV=1: MR_MLE_N: MR_MLE_C\tK01856 catB; muconate cycloisomerase [EC:5.5.1.1]" } ] }, { "name":"00625 Chloroalkane and chloroalkene degradation [PATH:gms00625]", "children":[ { "name":"SOIL9_38310 acetoin dehydrogenase : Alcohol dehydrogenase superfamily, zinc-containing OS=Rhodopseudomonas palustris (strain HaA2) GN=RPB_3806 PE=3 SV=1: ADH_N: ADH_zinc_N\tK00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase \/ alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]" }, { "name":"SOIL9_59540 betaine-aldehyde dehydrogenase : Aldehyde dehydrogenase (Acceptor) OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_2599 PE=3 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_82990 aldehyde dehydrogenase : Aldehyde dehydrogenase OS=uncultured planctomycete GN=HGMM_F16E03C18 PE=4 SV=1: Aldedh\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"SOIL9_14270 haloacid dehalogenase : Haloacetate dehalogenase OS=Sorangium cellulosum (strain So ce56) GN=had PE=4 SV=1: HAD_2\tK01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]" } ] }, { "name":"00361 Chlorocyclohexane and chlorobenzene degradation [PATH:gms00361]", "children":[ { "name":"SOIL9_03620 dienelactone hydrolase : Dienelactone hydrolase OS=Granulicella mallensis (strain ATCC BAA-1857 \/ DSM 23137 \/ MP5ACTX8) GN=AciX8_2614 PE=4 SV=1: DLH\tK01061 clcD; carboxymethylenebutenolidase [EC:3.1.1.45]" }, { "name":"SOIL9_56170 carboxymethylenebutenolidase : Dienelactone hydrolase-like enzyme OS=Microcoleus sp. PCC 7113 GN=Mic7113_4358 PE=4 SV=1: DLH\tK01061 clcD; carboxymethylenebutenolidase [EC:3.1.1.45]" }, { "name":"SOIL9_60580 dienelactone hydrolase : Putative uncharacterized protein OS=Rhodopirellula baltica (strain SH1) GN=RB4286 PE=4 SV=1: DLH\tK01061 clcD; carboxymethylenebutenolidase [EC:3.1.1.45]" }, { "name":"SOIL9_38760 mandelate racemase muconate lactonizing protein : Mandelate racemase\/muconate lactonizing protein OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD4472 PE=4 SV=1: MR_MLE_N: MR_MLE_C\tK01856 catB; muconate cycloisomerase [EC:5.5.1.1]" }, { "name":"SOIL9_14270 haloacid dehalogenase : Haloacetate dehalogenase OS=Sorangium cellulosum (strain So ce56) GN=had PE=4 SV=1: HAD_2\tK01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]" } ] }, { "name":"00623 Toluene degradation [PATH:gms00623]", "children":[ { "name":"SOIL9_38760 mandelate racemase muconate lactonizing protein : Mandelate racemase\/muconate lactonizing protein OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD4472 PE=4 SV=1: MR_MLE_N: MR_MLE_C\tK01856 catB; muconate cycloisomerase [EC:5.5.1.1]" }, { "name":"SOIL9_03620 dienelactone hydrolase : Dienelactone hydrolase OS=Granulicella mallensis (strain ATCC BAA-1857 \/ DSM 23137 \/ MP5ACTX8) GN=AciX8_2614 PE=4 SV=1: DLH\tK01061 clcD; carboxymethylenebutenolidase [EC:3.1.1.45]" }, { "name":"SOIL9_56170 carboxymethylenebutenolidase : Dienelactone hydrolase-like enzyme OS=Microcoleus sp. PCC 7113 GN=Mic7113_4358 PE=4 SV=1: DLH\tK01061 clcD; carboxymethylenebutenolidase [EC:3.1.1.45]" }, { "name":"SOIL9_60580 dienelactone hydrolase : Putative uncharacterized protein OS=Rhodopirellula baltica (strain SH1) GN=RB4286 PE=4 SV=1: DLH\tK01061 clcD; carboxymethylenebutenolidase [EC:3.1.1.45]" } ] }, { "name":"00622 Xylene degradation [PATH:gms00622]", "children":[ { "name":"SOIL9_79350 2-hydroxymuconic semialdehyde dehydrogenase : 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase OS=Fulvivirga imtechensis AK7 GN=C900_03217 PE=3 SV=1: Aldedh\tK10217 dmpC; aminomuconate-semialdehyde\/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]" }, { "name":"SOIL9_72730 4-oxalocrotonate tautomerase : 4-oxalocrotonate tautomerase family enzyme OS=Pseudomonas sp. GM49 GN=PMI29_05548 PE=4 SV=1: Tautomerase\tK01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]" } ] }, { "name":"00633 Nitrotoluene degradation" }, { "name":"00642 Ethylbenzene degradation" }, { "name":"00643 Styrene degradation [PATH:gms00643]", "children":[ { "name":"SOIL9_61770 homogentisate -dioxygenase : Homogentisate 1,2-dioxygenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1066 PE=4 SV=1: HgmA\tK00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]" }, { "name":"SOIL9_79060 nitrilase : Nitrilase OS=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 GN=ABENE_22140 PE=4 SV=1: CN_hydrolase: ACT_7\tK01501 E3.5.5.1; nitrilase [EC:3.5.5.1]" }, { "name":"SOIL9_79780 acyl :acetate 3-ketoacid alpha subunit : AtoD: acyl CoA:acetate\/3-ketoacid CoA transferase, alpha subunit OS=Desulfobacula toluolica (strain DSM 7467 \/ Tol2) GN=atoD PE=4 SV=1: CoA_trans\tK01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]" }, { "name":"SOIL9_71090 3-oxoacid -transferase : 3-oxoacid CoA-transferase OS=Smithella sp. SCADC GN=ER57_16605 PE=4 SV=1: CoA_trans\tK01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]" } ] }, { "name":"00791 Atrazine degradation" }, { "name":"00930 Caprolactam degradation [PATH:gms00930]", "children":[ { "name":"SOIL9_31660 family transcriptional regulator : ABC transporter subfamily C PrsD OS=Bradyrhizobium sp. DFCI-1 GN=C207_04323 PE=4 SV=1: DUF4066\tK18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]" }, { "name":"SOIL9_07210 Gluconolactonase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5868 PE=4 SV=1: SGL\tK01053 gnl; gluconolactonase [EC:3.1.1.17]" }, { "name":"SOIL9_42460 Uncharacterized protein OS=Dysgonomonas gadei ATCC BAA-286 GN=HMPREF9455_03868 PE=4 SV=1: SGL\tK01053 gnl; gluconolactonase [EC:3.1.1.17]" }, { "name":"SOIL9_69090 gluconolactonase : Gluconolactonase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2387 PE=4 SV=1: Esterase: SGL\tK01053 gnl; gluconolactonase [EC:3.1.1.17]" } ] }, { "name":"00363 Bisphenol degradation" }, { "name":"00621 Dioxin degradation", "children":[ { "name":"SOIL9_72730 4-oxalocrotonate tautomerase : 4-oxalocrotonate tautomerase family enzyme OS=Pseudomonas sp. GM49 GN=PMI29_05548 PE=4 SV=1: Tautomerase\tK01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]" } ] }, { "name":"00626 Naphthalene degradation [PATH:gms00626]", "children":[ { "name":"SOIL9_38310 acetoin dehydrogenase : Alcohol dehydrogenase superfamily, zinc-containing OS=Rhodopseudomonas palustris (strain HaA2) GN=RPB_3806 PE=3 SV=1: ADH_N: ADH_zinc_N\tK00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase \/ alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]" } ] }, { "name":"00624 Polycyclic aromatic hydrocarbon degradation", "children":[ { "name":"SOIL9_66480 intradiol ring-cleavage dioxygenase : Intradiol ring-cleavage dioxygenase OS=Rhodopirellula baltica WH47 GN=RBWH47_04345 PE=4 SV=1: Dioxygenase_C\tK00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]" }, { "name":"SOIL9_77080 intradiol ring-cleavage dioxygenase : Protocatechuate 3,4-dioxygenase beta subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5427 PE=4 SV=1: Dioxygenase_C\tK00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]" } ] }, { "name":"00365 Furfural degradation" }, { "name":"00984 Steroid degradation" }, { "name":"00980 Metabolism of xenobiotics by cytochrome P450" }, { "name":"00982 Drug metabolism - cytochrome P450" }, { "name":"00983 Drug metabolism - other enzymes" } ] }, { "name":"09112 Not included in regular maps", "children":[ { "name":"09113 Global maps only" } ] } ] }, { "name":"09120 Genetic Information Processing", "children":[ { "name":"09121 Transcription", "children":[ { "name":"03020 RNA polymerase [PATH:gms03020]", "children":[ { "name":"SOIL9_11240 dna-directed rna polymerase subunit beta : DNA-directed RNA polymerase subunit beta OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rpoB PE=3 SV=1: RNA_pol_Rpb2_1: RNA_pol_Rpb2_2: RNA_pol_Rpb2_3: RNA_pol_Rpb2_45: RNA_pol_Rpb2_6: RNA_pol_Rpb2_7\tK03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]" }, { "name":"SOIL9_11250 dna-directed rna polymerase subunit beta : DNA-directed RNA polymerase subunit beta' OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rpoC PE=3 SV=1: RNA_pol_Rpb1_1: RNA_pol_Rpb1_2: RNA_pol_Rpb1_3: RNA_pol_Rpb1_4: RNA_pol_Rpb1_5\tK03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]" }, { "name":"SOIL9_50350 rna polymerase alpha subunit domain protein : DNA-directed RNA polymerase subunit alpha (Fragment) OS=uncultured planctomycete GN=HGMM_F13D05C26 PE=4 SV=1: TPR_11: TPR_2: RNA_pol_A_CTD: RNA_pol_A_CTD\tK03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]" }, { "name":"SOIL9_84830 dna-directed rna polymerase subunit alpha : DNA-directed RNA polymerase subunit alpha OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rpoA PE=3 SV=1: RNA_pol_L: RNA_pol_A_bac: RNA_pol_A_CTD\tK03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]" }, { "name":"SOIL9_59760 dna-directed rna polymerase subunit omega : DNA-directed RNA polymerase subunit omega OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rpoZ PE=3 SV=1: RNA_pol_Rpb6\tK03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]" } ] }, { "name":"03022 Basal transcription factors", "children":[ { "name":"SOIL9_63810 type iii restriction protein res subunit : DNA\/RNA helicase, superfamily II OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6347 PE=4 SV=1: Helicase_C_3: ResIII: Helicase_C\tK10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]" } ] }, { "name":"03040 Spliceosome" } ] }, { "name":"09122 Translation", "children":[ { "name":"03010 Ribosome [PATH:gms03010]", "children":[ { "name":"SOIL9__R70 score=1415.6; score=1415.6; frame=.\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SOIL9__R80 score=1415.6; score=1415.6; frame=.\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SOIL9__R90 score=1415.6; score=1415.6; frame=.\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SOIL9__R40 score=2588.1; score=2588.1; frame=.\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SOIL9__R50 score=2588.1; score=2588.1; frame=.\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SOIL9__R60 score=2588.1; score=2588.1; frame=.\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SOIL9__R10 score=75.6; score=75.6; frame=.\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SOIL9__R20 score=75.6; score=75.6; frame=.\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SOIL9__R30 score=75.6; score=75.6; frame=.\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SOIL9_42260 30s ribosomal protein s1 : Ribosomal protein S1 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5356 PE=4 SV=1: S1: S1: S1\tK02945 RP-S1; small subunit ribosomal protein S1" }, { "name":"SOIL9_50420 30s ribosomal protein s1 : 30S ribosomal protein S1 OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1182 PE=3 SV=1: S1: S1: S1: S1: S1: S1\tK02945 RP-S1; small subunit ribosomal protein S1" }, { "name":"SOIL9_12240 30s ribosomal protein s2 : 30S ribosomal protein S2 OS=Rhodopirellula maiorica SM1 GN=rpsB PE=3 SV=1: Ribosomal_S2\tK02967 RP-S2; small subunit ribosomal protein S2" }, { "name":"SOIL9_84640 30s ribosomal protein s3 : 30S ribosomal protein S3 OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=rpsC PE=3 SV=1: KH_2: Ribosomal_S3_C\tK02982 RP-S3; small subunit ribosomal protein S3" }, { "name":"SOIL9_41000 30s ribosomal protein s4 : 30S ribosomal protein S4 OS=Planctomyces maris DSM 8797 GN=rpsD PE=3 SV=1: Ribosomal_S4: S4\tK02986 RP-S4; small subunit ribosomal protein S4" }, { "name":"SOIL9_84820 30s ribosomal protein s4 : 30S ribosomal protein S4 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rpsD PE=3 SV=1: Ribosomal_S4: S4\tK02986 RP-S4; small subunit ribosomal protein S4" }, { "name":"SOIL9_84750 30s ribosomal protein s5 : 30S ribosomal protein S5 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rpsE PE=3 SV=1: Ribosomal_S5: Ribosomal_S5_C\tK02988 RP-S5; small subunit ribosomal protein S5" }, { "name":"SOIL9_64930 30s ribosomal protein s6 : 30S ribosomal protein S6 OS=Rhodopirellula baltica SWK14 GN=rpsF PE=3 SV=1: Ribosomal_S6\tK02990 RP-S6; small subunit ribosomal protein S6" }, { "name":"SOIL9_11270 30s ribosomal protein s7 : 30S ribosomal protein S7 OS=Blastopirellula marina DSM 3645 GN=rpsG PE=3 SV=1: Ribosomal_S7\tK02992 RP-S7; small subunit ribosomal protein S7" }, { "name":"SOIL9_84720 30s ribosomal protein s8 : 30S ribosomal protein S8 OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=rpsH PE=3 SV=1: Ribosomal_S8\tK02994 RP-S8; small subunit ribosomal protein S8" }, { "name":"SOIL9_06190 30s ribosomal protein s9 : 30S ribosomal protein S9 OS=planctomycete KSU-1 GN=rpsI PE=3 SV=1: Ribosomal_S9\tK02996 RP-S9; small subunit ribosomal protein S9" }, { "name":"SOIL9_84580 30s ribosomal protein s10 : 30S ribosomal protein S10 OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=rpsJ PE=3 SV=1: Ribosomal_S10\tK02946 RP-S10; small subunit ribosomal protein S10" }, { "name":"SOIL9_84810 30s ribosomal protein s11 : 30S ribosomal protein S11 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=rpsK PE=3 SV=1: Ribosomal_S11\tK02948 RP-S11; small subunit ribosomal protein S11" }, { "name":"SOIL9_11260 30s ribosomal protein s12 : 30S ribosomal protein S12 OS=Candidatus Arthromitus sp. SFB-mouse-NL GN=rpsL PE=3 SV=1: Ribosom_S12_S23\tK02950 RP-S12; small subunit ribosomal protein S12" }, { "name":"SOIL9_84800 30s ribosomal protein s13 : 30S ribosomal protein S13 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=rpsM PE=3 SV=1: Ribosomal_S13\tK02952 RP-S13; small subunit ribosomal protein S13" }, { "name":"SOIL9_84710 30s ribosomal protein s14 : 30S ribosomal protein S14 type Z OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=rpsZ PE=3 SV=1: Ribosomal_S14\tK02954 RP-S14; small subunit ribosomal protein S14" }, { "name":"SOIL9_56400 30s ribosomal protein s15 : 30S ribosomal protein S15 OS=uncultured planctomycete GN=rpsO PE=3 SV=1: Ribosomal_S15\tK02956 RP-S15; small subunit ribosomal protein S15" }, { "name":"SOIL9_40140 30s ribosomal protein s16 : 30S ribosomal protein S16 OS=Rhodopirellula baltica (strain SH1) GN=rpsP PE=3 SV=1: Ribosomal_S16\tK02959 RP-S16; small subunit ribosomal protein S16" }, { "name":"SOIL9_84670 30s ribosomal protein s17 : 30S ribosomal protein S17 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rpsQ PE=3 SV=1: Ribosomal_S17\tK02961 RP-S17; small subunit ribosomal protein S17" }, { "name":"SOIL9_40990 30s ribosomal protein s18 : 30S ribosomal protein S18 OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=rpsR PE=3 SV=1: Ribosomal_S18\tK02963 RP-S18; small subunit ribosomal protein S18" }, { "name":"SOIL9_69130 30s ribosomal protein s18 : 30S ribosomal protein S18 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rpsR PE=3 SV=1: Ribosomal_S18\tK02963 RP-S18; small subunit ribosomal protein S18" }, { "name":"SOIL9_84620 30s ribosomal protein s19 : 30S ribosomal protein S19 OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=rpsS PE=3 SV=1: Ribosomal_S19\tK02965 RP-S19; small subunit ribosomal protein S19" }, { "name":"SOIL9_12260 30s ribosomal protein s20 : 30S ribosomal protein S20 OS=Rhodopirellula baltica SWK14 GN=rpsT PE=3 SV=1: Ribosomal_S20p\tK02968 RP-S20; small subunit ribosomal protein S20" }, { "name":"SOIL9_11940 30s ribosomal protein s21 : 30S ribosomal protein S21 OS=Methylophilaceae bacterium 11 GN=rpsU PE=3 SV=1: Ribosomal_S21\tK02970 RP-S21; small subunit ribosomal protein S21" }, { "name":"SOIL9_40450 30s ribosomal protein s21 : 30S ribosomal protein S21 OS=Burkholderia phytofirmans (strain DSM 17436 \/ PsJN) GN=rpsU PE=3 SV=1: Ribosomal_S21\tK02970 RP-S21; small subunit ribosomal protein S21" }, { "name":"SOIL9_11210 50s ribosomal protein l1 : 50S ribosomal protein L1 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rplA PE=3 SV=1: Ribosomal_L1\tK02863 RP-L1; large subunit ribosomal protein L1" }, { "name":"SOIL9_84610 50s ribosomal protein l2 : 50S ribosomal protein L2 OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=rplB PE=3 SV=1: Ribosomal_L2: Ribosomal_L2_C\tK02886 RP-L2; large subunit ribosomal protein L2" }, { "name":"SOIL9_10620 50s ribosomal protein l3 : 50S ribosomal protein L3 OS=Rhodopirellula sallentina SM41 GN=rplC PE=3 SV=1: Ribosomal_L3\tK02906 RP-L3; large subunit ribosomal protein L3" }, { "name":"SOIL9_84590 50s ribosomal protein l4 : 50S ribosomal protein L4 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rplD PE=3 SV=1: Ribosomal_L4\tK02926 RP-L4; large subunit ribosomal protein L4" }, { "name":"SOIL9_84700 50s ribosomal protein l5 : 50S ribosomal protein L5 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=rplE PE=3 SV=1: Ribosomal_L5: Ribosomal_L5_C\tK02931 RP-L5; large subunit ribosomal protein L5" }, { "name":"SOIL9_84730 50s ribosomal protein l6 : 50S ribosomal protein L6 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=rplF PE=3 SV=1: Ribosomal_L6: Ribosomal_L6\tK02933 RP-L6; large subunit ribosomal protein L6" }, { "name":"SOIL9_64910 50s ribosomal protein l9 : 50S ribosomal protein L9 OS=Blastopirellula marina DSM 3645 GN=rplI PE=3 SV=1: Ribosomal_L9_N: Ribosomal_L9_C\tK02939 RP-L9; large subunit ribosomal protein L9" }, { "name":"SOIL9_11220 50s ribosomal protein l10 : 50S ribosomal protein L10 OS=Rhodopirellula maiorica SM1 GN=RMSM_03399 PE=3 SV=1: Ribosomal_L10\tK02864 RP-L10; large subunit ribosomal protein L10" }, { "name":"SOIL9_11200 50s ribosomal protein l11 : 50S ribosomal protein L11 OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=rplK PE=3 SV=1: Ribosomal_L11_N: Ribosomal_L11\tK02867 RP-L11; large subunit ribosomal protein L11" }, { "name":"SOIL9_11230 50s ribosomal protein l7 l12 : 50S ribosomal protein L7\/L12 OS=Salipiger mucosus DSM 16094 GN=rplL PE=3 SV=1: Ribosomal_L12\tK02935 RP-L7; large subunit ribosomal protein L7\/L12" }, { "name":"SOIL9_32600 unnamed protein product; BLAST_uniprot: no_hits\tK02935 RP-L7; large subunit ribosomal protein L7\/L12" }, { "name":"SOIL9_06200 50s ribosomal protein l13 : 50S ribosomal protein L13 OS=Clostridium sp. CAG:590 GN=rplM PE=3 SV=1: Ribosomal_L13\tK02871 RP-L13; large subunit ribosomal protein L13" }, { "name":"SOIL9_84680 50s ribosomal protein l14 : 50S ribosomal protein L14 OS=Anaerotruncus sp. G3(2012) GN=rplN PE=3 SV=1: Ribosomal_L14\tK02874 RP-L14; large subunit ribosomal protein L14" }, { "name":"SOIL9_84760 50s ribosomal protein l15 : 50S ribosomal protein L15 OS=Clostridiales bacterium S7-1-4 GN=rplO PE=3 SV=1: Ribosomal_L18e\tK02876 RP-L15; large subunit ribosomal protein L15" }, { "name":"SOIL9_84650 50s ribosomal protein l16 : 50S ribosomal protein L16 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rplP PE=3 SV=1: Ribosomal_L16\tK02878 RP-L16; large subunit ribosomal protein L16" }, { "name":"SOIL9_84840 50s ribosomal protein l17 : 50S ribosomal protein L17 OS=Ahrensia sp. R2A130 GN=rplQ PE=3 SV=1: Ribosomal_L17\tK02879 RP-L17; large subunit ribosomal protein L17" }, { "name":"SOIL9_84740 50s ribosomal protein l18 : 50S ribosomal protein L18 OS=Paenibacillus curdlanolyticus YK9 GN=rplR PE=3 SV=1: Ribosomal_L18p\tK02881 RP-L18; large subunit ribosomal protein L18" }, { "name":"SOIL9_40120 50s ribosomal protein l19 : 50S ribosomal protein L19 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=rplS PE=3 SV=1: Ribosomal_L19\tK02884 RP-L19; large subunit ribosomal protein L19" }, { "name":"SOIL9_65290 50s ribosomal protein l20 : 50S ribosomal protein L20 OS=Rhodopirellula sallentina SM41 GN=rplT PE=3 SV=1: Ribosomal_L20\tK02887 RP-L20; large subunit ribosomal protein L20" }, { "name":"SOIL9_17560 ribosomal protein l21 : 50S ribosomal protein L21 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=rplU PE=3 SV=1: Ribosomal_L21p\tK02888 RP-L21; large subunit ribosomal protein L21" }, { "name":"SOIL9_84630 50s ribosomal protein l22 : Marine sediment metagenome DNA, contig: S01H1_L00396 OS=marine sediment metagenome GN=S01H1_04180 PE=3 SV=1: Ribosomal_L22\tK02890 RP-L22; large subunit ribosomal protein L22" }, { "name":"SOIL9_84600 50s ribosomal protein l23 : 50S ribosomal protein L23 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rplW PE=3 SV=1: Ribosomal_L23\tK02892 RP-L23; large subunit ribosomal protein L23" }, { "name":"SOIL9_84690 50s ribosomal protein l24 : 50S ribosomal protein L24 OS=Rhodopirellula maiorica SM1 GN=rplX PE=3 SV=1: KOW\tK02895 RP-L24; large subunit ribosomal protein L24" }, { "name":"SOIL9_64950 50s ribosomal protein l25 : 50S ribosomal protein L25 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rplY PE=3 SV=1: Ribosomal_L25p: Ribosomal_TL5_C\tK02897 RP-L25; large subunit ribosomal protein L25" }, { "name":"SOIL9_83600 50s ribosomal protein l27 : 50S ribosomal protein L27 OS=Planctomyces maris DSM 8797 GN=rpmA PE=3 SV=1: Ribosomal_L27\tK02899 RP-L27; large subunit ribosomal protein L27" }, { "name":"SOIL9_82810 50s ribosomal protein l28 : Marine sediment metagenome DNA, contig: S01H4_C04838 OS=marine sediment metagenome GN=S01H4_11764 PE=3 SV=1: Ribosomal_L28\tK02902 RP-L28; large subunit ribosomal protein L28" }, { "name":"SOIL9_84660 50s ribosomal protein l29 : 50S ribosomal protein L29 OS=Planctomyces maris DSM 8797 GN=rpmC PE=3 SV=1: Ribosomal_L29\tK02904 RP-L29; large subunit ribosomal protein L29" }, { "name":"SOIL9_17810 50s ribosomal protein l31 : 50S ribosomal protein L31 type B OS=Ignavibacterium album (strain DSM 19864 \/ JCM 16511 \/ NBRC 101810 \/ Mat9-16) GN=rpmE PE=3 SV=1: Ribosomal_L31\tK02909 RP-L31; large subunit ribosomal protein L31" }, { "name":"SOIL9_84180 50s ribosomal protein l32 : 50S ribosomal protein L32 OS=Thermodesulfobacterium geofontis (strain OPB45) GN=rpmF PE=3 SV=1: Ribosomal_L32p\tK02911 RP-L32; large subunit ribosomal protein L32" }, { "name":"SOIL9_37630 50s ribosomal protein l33 : 50S ribosomal protein L33 OS=Chloracidobacterium thermophilum (strain B) GN=rpmG PE=3 SV=1: Ribosomal_L33\tK02913 RP-L33; large subunit ribosomal protein L33" }, { "name":"SOIL9_65280 50s ribosomal protein l35 : : Ribosomal_L35p\tK02916 RP-L35; large subunit ribosomal protein L35" } ] }, { "name":"00970 Aminoacyl-tRNA biosynthesis [PATH:gms00970]", "children":[ { "name":"SOIL9__T250 score=79.65; score=79.65\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"SOIL9__T40 score=87.04; score=87.04\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"SOIL9__T460 score=83.68; score=83.68\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"SOIL9__T110 score=70.30; score=70.30\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SOIL9__T150 score=67.05; score=67.05\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SOIL9__T160 score=73.40; score=73.40\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SOIL9__T230 score=76.39; score=76.39\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SOIL9__T390 score=46.59; score=46.59\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SOIL9__T450 score=40.33; score=40.33\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SOIL9__T470 score=81.80; score=81.80\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SOIL9__T50 score=65.06; score=65.06\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SOIL9__T650 score=73.66; score=73.66\tK14220 tRNA-Asn; tRNA Asn" }, { "name":"SOIL9__T660 score=58.50; score=58.50\tK14220 tRNA-Asn; tRNA Asn" }, { "name":"SOIL9__T430 score=82.68; score=82.68\tK14221 tRNA-Asp; tRNA Asp" }, { "name":"SOIL9__T190 score=53.53; score=53.53\tK14223 tRNA-Gln; tRNA Gln" }, { "name":"SOIL9__T630 score=56.95; score=56.95\tK14223 tRNA-Gln; tRNA Gln" }, { "name":"SOIL9__T350 score=57.16; score=57.16\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"SOIL9__T500 score=56.01; score=56.01\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"SOIL9__T590 score=51.78; score=51.78\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"SOIL9__T310 score=45.19; score=45.19\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SOIL9__T540 score=77.25; score=77.25\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SOIL9__T680 score=47.76; score=47.76\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SOIL9__T530 score=80.21; score=80.21\tK14226 tRNA-His; tRNA His" }, { "name":"SOIL9__T30 score=80.27; score=80.27\tK14227 tRNA-Ile; tRNA Ile" }, { "name":"SOIL9__T130 score=66.05; score=66.05\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SOIL9__T330 score=37.33; score=37.33\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SOIL9__T360 score=48.51; score=48.51\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SOIL9__T370 score=43.33; score=43.33\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SOIL9__T510 score=66.02; score=66.02\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SOIL9__T620 score=67.36; score=67.36\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SOIL9__T210 score=84.77; score=84.77\tK14229 tRNA-Lys; tRNA Lys" }, { "name":"SOIL9__T420 score=90.89; score=90.89\tK14229 tRNA-Lys; tRNA Lys" }, { "name":"SOIL9__T20 score=81.52; score=81.52\tK14230 tRNA-Met; tRNA Met" }, { "name":"SOIL9__T270 score=41.76; score=41.76\tK14230 tRNA-Met; tRNA Met" }, { "name":"SOIL9__T520 score=75.88; score=75.88\tK14230 tRNA-Met; tRNA Met" }, { "name":"SOIL9__T560 score=44.67; score=44.67\tK14230 tRNA-Met; tRNA Met" }, { "name":"SOIL9__T640 score=44.67; score=44.67\tK14230 tRNA-Met; tRNA Met" }, { "name":"SOIL9__T720 score=41.99; score=41.99\tK14230 tRNA-Met; tRNA Met" }, { "name":"SOIL9__T140 score=80.81; score=80.81\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"SOIL9__T240 score=79.99; score=79.99\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"SOIL9__T550 score=83.14; score=83.14\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"SOIL9__T700 score=49.30; score=49.30\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"SOIL9__T220 score=73.94; score=73.94\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"SOIL9__T260 score=59.92; score=59.92\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"SOIL9__T290 score=58.56; score=58.56\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"SOIL9__T610 score=66.56; score=66.56\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"SOIL9__T580 score=77.70; score=77.70\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"SOIL9__T60 score=75.23; score=75.23\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"SOIL9__T90 score=89.18; score=89.18\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"SOIL9__T100 score=73.68; score=73.68\tK14235 tRNA-Trp; tRNA Trp" }, { "name":"SOIL9__T170 score=84.09; score=84.09\tK14237 tRNA-Val; tRNA Val" }, { "name":"SOIL9__T180 score=69.11; score=69.11\tK14237 tRNA-Val; tRNA Val" }, { "name":"SOIL9__T200 score=82.20; score=82.20\tK14237 tRNA-Val; tRNA Val" }, { "name":"SOIL9__T400 score=56.36; score=56.36\tK14237 tRNA-Val; tRNA Val" }, { "name":"SOIL9__T490 score=49.61; score=49.61\tK14237 tRNA-Val; tRNA Val" }, { "name":"SOIL9_05650 glutamyl-q trna ligase : Glutamyl-or glutaminyl-tRNA synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1159 PE=3 SV=1: tRNA-synt_1c\tK01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]" }, { "name":"SOIL9_66140 glutamyl-trna amidotransferase : Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=gatA PE=3 SV=1: Amidase\tK02433 gatA; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]" }, { "name":"SOIL9_70290 aspartyl glutamyl-trna amidotransferase subunit b : Aspartyl\/glutamyl-tRNA(Asn\/Gln) amidotransferase subunit B OS=Blastopirellula marina DSM 3645 GN=gatB PE=3 SV=1: GatB_N: GatB_Yqey\tK02434 gatB; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]" }, { "name":"SOIL9_66130 glutamyl-trna amidotransferase subunit c : Aspartyl\/glutamyl-tRNA(Asn\/Gln) amidotransferase subunit C OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=gatC PE=3 SV=1: Glu-tRNAGln\tK02435 gatC; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]" }, { "name":"SOIL9_62840 alanyl-trna synthetase : Alanine--tRNA ligase OS=Malassezia globosa (strain ATCC MYA-4612 \/ CBS 7966) GN=ALA1 PE=3 SV=1: tRNA-synt_2c: tRNA_SAD: DHHA1\tK01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]" }, { "name":"SOIL9_17020 aspartyl-trna synthetase : Aspartate--tRNA(Asp\/Asn) ligase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=aspS PE=3 SV=1: tRNA_anti-codon: tRNA-synt_2: GAD\tK01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]" }, { "name":"SOIL9_23590 asparaginyl-trna synthetase : Asparagine--tRNA ligase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=asnS PE=3 SV=1: tRNA_anti-codon: tRNA-synt_2\tK01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]" }, { "name":"SOIL9_46420 glycyl-trna synthetase : Glycine--tRNA ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=glyQS PE=3 SV=1: tRNA-synt_2b: HGTP_anticodon\tK01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]" }, { "name":"SOIL9_29120 threonyl-trna synthetase : Threonine--tRNA ligase OS=Herpetosiphon aurantiacus (strain ATCC 23779 \/ DSM 785) GN=thrS PE=3 SV=1: tRNA_SAD: tRNA-synt_2b: HGTP_anticodon\tK01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]" }, { "name":"SOIL9_31460 seryl-trna synthetase : Serine--tRNA ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=serS PE=3 SV=1: Seryl_tRNA_N: tRNA-synt_2b\tK01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]" }, { "name":"SOIL9_54530 selenocysteine synthase : L-seryl-tRNA(Sec) selenium transferase OS=uncultured planctomycete GN=selA PE=3 SV=1: SelA\tK01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]" }, { "name":"SOIL9_69860 cysteinyl-trna synthetase : Cysteine--tRNA ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=cysS PE=3 SV=1: tRNA-synt_1e: DALR_2\tK01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]" }, { "name":"SOIL9_46920 methionyl-trna synthetase : Methionine--tRNA ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=metG PE=3 SV=1: tRNA-synt_1g: Anticodon_1\tK01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]" }, { "name":"SOIL9_74300 methionyl-trna formyltransferase : Methionyl-tRNA formyltransferase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=fmt PE=3 SV=1: Formyl_trans_N: Formyl_trans_C\tK00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]" }, { "name":"SOIL9_12010 valyl-trna synthetase : Valine--tRNA ligase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=valS PE=3 SV=1: tRNA-synt_1: Anticodon_1: Val_tRNA-synt_C\tK01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]" }, { "name":"SOIL9_23170 leucyl-trna synthetase : Leucine--tRNA ligase OS=uncultured planctomycete GN=leuS PE=3 SV=1: tRNA-synt_1: tRNA-synt_1_2: tRNA-synt_1: Anticodon_1\tK01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]" }, { "name":"SOIL9_76630 isoleucyl-trna synthetase : Isoleucine--tRNA ligase OS=uncultured Acidobacteria bacterium A2 PE=4 SV=1: tRNA-synt_1: tRNA-synt_1: Anticodon_1\tK01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]" }, { "name":"SOIL9_07220 lysyl-trna synthetase : Lysine--tRNA ligase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=lysS PE=3 SV=1: tRNA_anti-codon: tRNA-synt_2\tK04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]" }, { "name":"SOIL9_06530 arginyl-trna synthetase : Arginine--tRNA ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=argS PE=3 SV=1: Arg_tRNA_synt_N: tRNA-synt_1d: DALR_1\tK01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]" }, { "name":"SOIL9_83590 prolyl-trna synthetase : Proline--tRNA ligase OS=Dysgonomonas gadei ATCC BAA-286 GN=proS PE=3 SV=1: tRNA-synt_2b: HGTP_anticodon: ProRS-C_1\tK01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]" }, { "name":"SOIL9_54580 histidyl-trna synthetase : Histidine--tRNA ligase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=hisS PE=3 SV=1: tRNA-synt_His: HGTP_anticodon\tK01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]" }, { "name":"SOIL9_67900 phenylalanyl-trna synthetase subunit alpha : Phenylalanine--tRNA ligase alpha subunit OS=Roseiflexus sp. (strain RS-1) GN=pheS PE=3 SV=1: Phe_tRNA-synt_N: tRNA-synt_2d\tK01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]" }, { "name":"SOIL9_42840 phenylalanyl-trna synthetase subunit beta : Phenylalanine--tRNA ligase beta subunit OS=Anaerolinea thermophila (strain DSM 14523 \/ JCM 11388 \/ NBRC 100420 \/ UNI-1) GN=pheT PE=3 SV=1: tRNA_bind: B3_4: B5: FDX-ACB\tK01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]" }, { "name":"SOIL9_40100 tyrosyl-trna synthetase : Tyrosine--tRNA ligase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_2772 PE=4 SV=1: tRNA-synt_1b\tK01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]" }, { "name":"SOIL9_20440 tryptophanyl-trna synthetase : Tryptophan--tRNA ligase OS=Ilyobacter polytropus (strain DSM 2926 \/ CuHBu1) GN=trpS PE=3 SV=1: tRNA-synt_1b\tK01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]" } ] }, { "name":"03013 Nucleocytoplasmic transport" }, { "name":"03015 mRNA surveillance pathway" }, { "name":"03008 Ribosome biogenesis in eukaryotes", "children":[ { "name":"SOIL9_07640 ribonuclease iii : Ribonuclease 3 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rnc PE=3 SV=1: Ribonucleas_3_3: dsrm\tK03685 rnc; ribonuclease III [EC:3.1.26.3]" } ] } ] }, { "name":"09123 Folding, sorting and degradation", "children":[ { "name":"03060 Protein export [PATH:gms03060]", "children":[ { "name":"SOIL9_84770 preprotein translocase subunit : Protein translocase subunit SecY OS=Planctomyces maris DSM 8797 GN=secY PE=3 SV=1: SecY\tK03076 secY; preprotein translocase subunit SecY" }, { "name":"SOIL9_84220 unnamed protein product; BLAST_uniprot: no_hits\tK03073 secE; preprotein translocase subunit SecE" }, { "name":"SOIL9_59730 preprotein translocase subunit : : SecG\tK03075 secG; preprotein translocase subunit SecG" }, { "name":"SOIL9_50320 protein-export membrane protein secd : Protein-export membrane protein SecD OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1349 PE=3 SV=1: SecD_SecF: SecD_SecF\tK12257 secDF; SecD\/SecF fusion protein" }, { "name":"SOIL9_50330 Preprotein translocase subunit YajC OS=Hyphomonas johnsonii MHS-2 GN=HJO_05365 PE=4 SV=1: YajC\tK03210 yajC; preprotein translocase subunit YajC" }, { "name":"SOIL9_46890 60 kda inner membrane insertion protein : Membrane protein insertase YidC OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=yidC PE=3 SV=1: YidC_periplas: 60KD_IMP\tK03217 yidC; YidC\/Oxa1 family membrane protein insertase" }, { "name":"SOIL9_72400 preprotein translocase subunit : Protein translocase subunit SecA OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=secA PE=3 SV=1: SecA_DEAD: SecA_PP_bind: SecA_SW: SecA_SW: SEC-C\tK03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]" }, { "name":"SOIL9_76520 preprotein translocase subunit : Protein translocase subunit SecA OS=uncultured planctomycete GN=secA PE=3 SV=1: SecA_DEAD: SecA_PP_bind\tK03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]" }, { "name":"SOIL9_40150 signal recognition particle protein : Signal recognition particle protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=ffh PE=3 SV=1: SRP54_N: SRP54: SRP_SPB\tK03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]" }, { "name":"SOIL9_22370 cell division protein : Signal recognition particle receptor FtsY OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ftsY PE=3 SV=1: SRP54_N: SRP54\tK03110 ftsY; fused signal recognition particle receptor" }, { "name":"SOIL9_25690 twin-arginine translocation e family subunit : Sec-independent protein translocase protein TatA OS=Phycisphaera mikurensis (strain NBRC 102666 \/ KCTC 22515 \/ FYK2301M01) GN=tatA PE=3 SV=1: MttA_Hcf106\tK03116 tatA; sec-independent protein translocase protein TatA" }, { "name":"SOIL9_00100 unnamed protein product; BLAST_uniprot: no_hits\tK03117 tatB; sec-independent protein translocase protein TatB" }, { "name":"SOIL9_34100 sec-independent protein subunit : Sec-independent protein translocase protein TatC OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=tatC PE=3 SV=1: TatC\tK03118 tatC; sec-independent protein translocase protein TatC" }, { "name":"SOIL9_10530 lipoprotein signal peptidase : Lipoprotein signal peptidase OS=Cellvibrio sp. BR GN=lspA PE=3 SV=1: Peptidase_A8\tK03101 lspA; signal peptidase II [EC:3.4.23.36]" } ] }, { "name":"04141 Protein processing in endoplasmic reticulum [PATH:gms04141]", "children":[ { "name":"SOIL9_59030 heat shock protein 90 : Chaperone protein HtpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1: HATPase_c_3: HSP90\tK04079 HSP90A; molecular chaperone HtpG" }, { "name":"SOIL9_10500 Heat shock protein, HSP20 OS=Rhodopirellula maiorica SM1 GN=RMSM_05792 PE=3 SV=1: HSP20\tK13993 HSP20; HSP20 family protein" }, { "name":"SOIL9_49370 Heat shock protein, HSP20 OS=Rhodopirellula maiorica SM1 GN=RMSM_05792 PE=3 SV=1: HSP20\tK13993 HSP20; HSP20 family protein" }, { "name":"SOIL9_49380 Heat shock protein Hsp20 OS=Rhodopirellula maiorica SM1 GN=RMSM_05793 PE=3 SV=1: HSP20\tK13993 HSP20; HSP20 family protein" }, { "name":"SOIL9_49390 Heat shock protein OS=planctomycete KSU-1 GN=KSU1_D0143 PE=3 SV=1: HSP20\tK13993 HSP20; HSP20 family protein" }, { "name":"SOIL9_60760 Small heat shock protein OS=Planctomyces maris DSM 8797 GN=PM8797T_27704 PE=3 SV=1: HSP20\tK13993 HSP20; HSP20 family protein" }, { "name":"SOIL9_60770 Heat shock protein Hsp20 OS=Rhodopirellula europaea SH398 GN=RESH_01705 PE=3 SV=1: HSP20\tK13993 HSP20; HSP20 family protein" }, { "name":"SOIL9_60780 Heat shock protein, HSP20 OS=Rhodopirellula maiorica SM1 GN=RMSM_05792 PE=3 SV=1: HSP20\tK13993 HSP20; HSP20 family protein" }, { "name":"SOIL9_60850 Heat shock protein, HSP20 OS=Rhodopirellula maiorica SM1 GN=RMSM_05792 PE=3 SV=1: HSP20\tK13993 HSP20; HSP20 family protein" }, { "name":"SOIL9_60860 Hsp20\/alpha crystallin family protein OS=delta proteobacterium NaphS2 GN=NPH_7165 PE=3 SV=1: HSP20\tK13993 HSP20; HSP20 family protein" } ] }, { "name":"04130 SNARE interactions in vesicular transport" }, { "name":"04120 Ubiquitin mediated proteolysis" }, { "name":"04122 Sulfur relay system [PATH:gms04122]", "children":[ { "name":"SOIL9_00460 cysteine desulfurase : Cysteine desulfurase family protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0245 PE=4 SV=1: Aminotran_5: Aminotran_5\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]" }, { "name":"SOIL9_25240 cysteine desulfurase : Cysteine desulfurase IscS OS=Acidobacterium capsulatum (strain ATCC 51196 \/ DSM 11244 \/ JCM 7670) GN=icsS2 PE=3 SV=1: Aminotran_5\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]" }, { "name":"SOIL9_47510 thiosulfate sulfurtransferase : Sulfurtransferase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2817 PE=4 SV=1: Rhodanese: Rhodanese\tK01011 TST; thiosulfate\/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]" }, { "name":"SOIL9_82380 Marine sediment metagenome DNA, contig: S01H1_S18985 (Fragment) OS=marine sediment metagenome GN=S01H1_52237 PE=4 SV=1: Rhodanese: Rhodanese\tK01011 TST; thiosulfate\/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]" }, { "name":"SOIL9_74620 trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase : tRNA-specific 2-thiouridylase MnmA OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=mnmA PE=3 SV=1: tRNA_Me_trans\tK00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]" }, { "name":"SOIL9_69810 molybdopterin converting factor : Molybdopterin converting factor, large subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3710 PE=4 SV=1: MoaE\tK03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]" }, { "name":"SOIL9_69830 molybdenum cofactor biosynthesis protein : Cyclic pyranopterin monophosphate synthase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=moaA PE=3 SV=1: Radical_SAM: Mob_synth_C\tK03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]" }, { "name":"SOIL9_50780 Molybdenum cofactor biosynthesis protein MoaD OS=Cystobacter violaceus Cb vi76 GN=Q664_16405 PE=4 SV=1: ThiS\tK03636 moaD; sulfur-carrier protein" }, { "name":"SOIL9_69800 molybdopterin converting factor : ThiamineS protein OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_3958 PE=4 SV=1: ThiS\tK03636 moaD; sulfur-carrier protein" }, { "name":"SOIL9_50750 thiamine biosynthesis protein : Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6668 PE=4 SV=1: ThiF: MoeZ_MoeB\tK21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]" }, { "name":"SOIL9_62290 molybdenum cofactor biosynthesis protein : UBA\/THIF-type NAD\/FAD binding protein OS=Chloroflexus aurantiacus (strain ATCC 29364 \/ DSM 637 \/ Y-400-fl) GN=Chy400_3762 PE=4 SV=1: ThiF: MoeZ_MoeB: Rhodanese\tK21147 moeZR; sulfur-carrier protein adenylyltransferase\/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]" }, { "name":"SOIL9_55010 molybdenum cofactor biosynthesis protein : Cyclic pyranopterin monophosphate synthase accessory protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=moaC PE=3 SV=1: MoaC\tK03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]" }, { "name":"SOIL9_49690 molybdopterin adenylyltransferase : Molybdopterin adenylyltransferase OS=Sulfurospirillum multivorans DSM 12446 GN=SMUL_1916 PE=4 SV=1: MoCF_biosynth\tK03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]" }, { "name":"SOIL9_53420 mov34 mpn pad-1 family protein : Putative metal-dependent protease of the PAD1\/JAB1 superfamily OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2590 PE=4 SV=1: Prok-JAB\tK21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6]" } ] }, { "name":"03050 Proteasome" }, { "name":"03018 RNA degradation [PATH:gms03018]", "children":[ { "name":"SOIL9_23450 rne rng family : Hypothetical conserved protein OS=uncultured planctomycete GN=HGMM_F07G10C15 PE=4 SV=1: S1: RNase_E_G\tK08300 rne; ribonuclease E [EC:3.1.26.12]" }, { "name":"SOIL9_22170 enolase : Enolase OS=Brevibacillus panacihumi W25 GN=eno PE=3 SV=1: Enolase_N: Enolase_C\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]" }, { "name":"SOIL9_56410 polynucleotide phosphorylase : Polyribonucleotide nucleotidyltransferase OS=uncultured planctomycete GN=pnp PE=3 SV=1: RNase_PH: RNase_PH_C: PNPase: RNase_PH: RNase_PH_C: KH_1: S1\tK00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]" }, { "name":"SOIL9_23530 rna helicase : ATP-dependent RNA helicase RhlE OS=Gemmatimonas aurantiaca (strain T-27 \/ DSM 14586 \/ JCM 11422 \/ NBRC 100505) GN=rhlE PE=3 SV=1: DEAD: Helicase_C\tK11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]" }, { "name":"SOIL9_74050 ribonuclease r : Ribonuclease R OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rnr PE=3 SV=1: OB_RNB: RNB: S1\tK12573 rnr; ribonuclease R [EC:3.1.13.1]" }, { "name":"SOIL9_30800 heavy metal transporter : DEAD\/DEAH box helicase domain protein OS=Actinosynnema mirum (strain ATCC 29888 \/ DSM 43827 \/ NBRC 14064 \/ IMRU 3971) GN=Amir_2267 PE=3 SV=1: DEAD: Helicase_C: DbpA\tK05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]" }, { "name":"SOIL9_34260 dead deah box helicase : DEAD\/DEAH box helicase domain protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1620 PE=3 SV=1: DEAD: Helicase_C\tK05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]" }, { "name":"SOIL9_51150 atp-dependent dna helicase : ATP-dependent DNA helicase RecQ OS=Rhodopirellula baltica SH28 GN=RBSH_06099 PE=4 SV=1: DEAD: Helicase_C: RQC: HRDC: HTH_40\tK03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]" }, { "name":"SOIL9_81000 atp-dependent dna helicase : ATP-dependent DNA helicase, RecQ family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1452 PE=4 SV=1: DEAD: Helicase_C\tK03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]" }, { "name":"SOIL9_21530 transcription termination factor rho : Transcription termination factor Rho OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rho PE=3 SV=1: Rho_N: Rho_RNA_bind: ATP-synt_ab\tK03628 rho; transcription termination factor Rho" }, { "name":"SOIL9_47090 transcription termination factor rho : Transcription termination factor Rho OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rho PE=3 SV=1: Rho_RNA_bind: ATP-synt_ab\tK03628 rho; transcription termination factor Rho" }, { "name":"SOIL9_72430 transcription termination factor rho : Transcription termination factor Rho OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rho PE=3 SV=1: Rho_RNA_bind: ATP-synt_ab\tK03628 rho; transcription termination factor Rho" }, { "name":"SOIL9_17400 ribonuclease : Ribonuclease Y OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=rny PE=3 SV=1: DUF3552: KH_1: HD\tK18682 rny; ribonucrease Y [EC:3.1.-.-]" }, { "name":"SOIL9_25310 molecular chaperone : Chaperone protein HscA OS=Terriglobus roseus (strain DSM 18391 \/ NRRL B-41598 \/ KBS 63) GN=Terro_4169 PE=3 SV=1: HSP70: Fe-S_assembly\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SOIL9_54850 Heat shock protein 70 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3585 PE=3 SV=1: HSP70: HSP70\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SOIL9_59680 chaperone protein : Chaperone protein DnaK OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=dnaK PE=2 SV=1: HSP70\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SOIL9_50210 chaperonin : 60 kDa chaperonin OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=groL PE=3 SV=1: Cpn60_TCP1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SOIL9_50230 chaperonin : 60 kDa chaperonin OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=groL PE=3 SV=1: Cpn60_TCP1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SOIL9_50690 chaperonin : 60 kDa chaperonin OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=groL PE=3 SV=1: Cpn60_TCP1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SOIL9_58730 polyphosphate kinase : Polyphosphate kinase OS=Methylacidiphilum fumariolicum SolV GN=ppk PE=3 SV=1: PP_kinase_N: PP_kinase: PP_kinase_C\tK00937 ppk1; polyphosphate kinase [EC:2.7.4.1]" }, { "name":"SOIL9_25210 metal dependent phosphohydrolase : tRNA nucleotidyltransferase\/poly(A) polymerase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5938 PE=3 SV=1: PolyA_pol: PolyA_pol_RNAbd: tRNA_NucTran2_2\tK00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]" } ] } ] }, { "name":"09124 Replication and repair", "children":[ { "name":"03030 DNA replication [PATH:gms03030]", "children":[ { "name":"SOIL9_06100 exonuclease : Exonuclease OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_2401 PE=4 SV=1: RNase_T\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]" }, { "name":"SOIL9_64040 dna polymerase iii subunit alpha : DNA-directed DNA polymerase OS=Rhodopirellula baltica (strain SH1) GN=dnaE PE=4 SV=1: PHP: DNA_pol3_alpha: HHH_6: tRNA_anti-codon\tK02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]" }, { "name":"SOIL9_28290 dna polymerase iii subunit gamma tau : DNA polymerase III gamma and tau subunits OS=Blastopirellula marina DSM 3645 GN=DSM3645_28667 PE=4 SV=1: DNA_pol3_delta2: DNA_pol3_gamma3\tK02343 dnaX; DNA polymerase III subunit gamma\/tau [EC:2.7.7.7]" }, { "name":"SOIL9_17600 dna polymerase iii subunit delta : DNA polymerase III, delta'' subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4806 PE=4 SV=1: DNA_pol3_delta2\tK02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]" }, { "name":"SOIL9_47050 dna polymerase iii subunit delta : DNA polymerase III, delta subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2977 PE=4 SV=1: DNA_pol3_delta\tK02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]" }, { "name":"SOIL9_70130 dna polymerase iii subunit beta : DNA polymerase III subunit beta OS=Rhodopirellula baltica SWK14 GN=RBSWK_02256 PE=4 SV=1: DNA_pol3_beta: DNA_pol3_beta_2: DNA_pol3_beta_3\tK02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]" }, { "name":"SOIL9_36090 replicative dna helicase : Replicative DNA helicase OS=Thermanaerovibrio velox DSM 12556 GN=TheveDRAFT_1143 PE=4 SV=1: DnaB: DnaB_C\tK02314 dnaB; replicative DNA helicase [EC:5.6.2.3]" }, { "name":"SOIL9_40730 replicative dna helicase : Replicative DNA helicase OS=Rhodopirellula europaea 6C GN=RE6C_00217 PE=4 SV=1: DnaB: DnaB_C\tK02314 dnaB; replicative DNA helicase [EC:5.6.2.3]" }, { "name":"SOIL9_49610 replicative dna helicase : Probable replicative DNA helicase OS=Rhodopirellula baltica (strain SH1) GN=dnaB PE=4 SV=1: DnaB_C\tK02314 dnaB; replicative DNA helicase [EC:5.6.2.3]" }, { "name":"SOIL9_55530 replicative dna helicase : Replicative DNA helicase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0836 PE=4 SV=1: DnaB: DnaB_C\tK02314 dnaB; replicative DNA helicase [EC:5.6.2.3]" }, { "name":"SOIL9_58610 replicative dna helicase : Replicative DNA helicase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0836 PE=4 SV=1: DnaB: DnaB_C\tK02314 dnaB; replicative DNA helicase [EC:5.6.2.3]" }, { "name":"SOIL9_03960 dna primase : DNA primase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0213 PE=3 SV=1: zf-CHC2: Toprim_N: Toprim_4\tK02316 dnaG; DNA primase [EC:2.7.7.101]" }, { "name":"SOIL9_64920 single-stranded dna-binding protein : Single-stranded DNA-binding protein OS=Phycisphaera mikurensis (strain NBRC 102666 \/ KCTC 22515 \/ FYK2301M01) GN=ssb PE=4 SV=1: SSB\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SOIL9_00270 ribonuclease h : Ribonuclease HI OS=Thermoproteus tenax (strain ATCC 35583 \/ NBRC 100435 \/ JCM 9277 \/ Kra 1) GN=rnhA PE=4 SV=1: RVT_3\tK03469 rnhA; ribonuclease HI [EC:3.1.26.4]" }, { "name":"SOIL9_25960 ribonuclease h : Ribonuclease H OS=Pseudonocardia dioxanivorans (strain ATCC 55486 \/ DSM 44775 \/ JCM 13855 \/ CB1190) GN=Psed_2488 PE=4 SV=1: RNase_H\tK03469 rnhA; ribonuclease HI [EC:3.1.26.4]" }, { "name":"SOIL9_77480 ribonuclease h : Ribonuclease HI OS=Thermoproteus tenax (strain ATCC 35583 \/ NBRC 100435 \/ JCM 9277 \/ Kra 1) GN=rnhA PE=4 SV=1: RVT_3\tK03469 rnhA; ribonuclease HI [EC:3.1.26.4]" }, { "name":"SOIL9_80170 unnamed protein product; BLAST_uniprot: no_hits\tK03469 rnhA; ribonuclease HI [EC:3.1.26.4]" }, { "name":"SOIL9_21510 dna polymerase i : DNA polymerase I OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3785 PE=3 SV=1: 5_3_exonuc_N: 5_3_exonuc: DNA_pol_A_exo1: DNA_pol_A\tK02335 polA; DNA polymerase I [EC:2.7.7.7]" }, { "name":"SOIL9_72640 nad-dependent dna ligase : DNA ligase OS=uncultured bacterium GN=ligA PE=3 SV=1: DNA_ligase_aden: DNA_ligase_OB: HHH_2: BRCT\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]" } ] }, { "name":"03410 Base excision repair [PATH:gms03410]", "children":[ { "name":"SOIL9_59400 dna lyase : Endonuclease III OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD0258 PE=3 SV=1: HhH-GPD\tK10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]" }, { "name":"SOIL9_79690 endonuclease iii : Endonuclease III OS=Synechococcus sp. (strain JA-3-3Ab) GN=nth PE=3 SV=1: HhH-GPD: HHH: EndIII_4Fe-2S\tK10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]" }, { "name":"SOIL9_41720 uracil-dna glycosylase : Uracil-DNA glycosylase OS=Deinococcus deserti (strain VCD115 \/ DSM 17065 \/ LMG 22923) GN=ung PE=3 SV=1: UDG\tK03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]" }, { "name":"SOIL9_79480 a g-specific adenine glycosylase : A\/G-specific adenine glycosylase OS=Blastopirellula marina DSM 3645 GN=DSM3645_11537 PE=4 SV=1: HhH-GPD: NUDIX_4\tK03575 mutY; A\/G-specific adenine glycosylase [EC:3.2.2.31]" }, { "name":"SOIL9_73210 formamidopyrimidine-dna glycosylase : Formamidopyrimidine-DNA glycosylase OS=Pseudogulbenkiania ferrooxidans 2002 GN=mutM PE=3 SV=1: Fapy_DNA_glyco: H2TH: zf-FPG_IleRS\tK10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]" }, { "name":"SOIL9_23130 dna-3-methyladenine glycosylase : 3-methyladenine DNA glycosylase\/8-oxoguanine DNA glycosylase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2693 PE=4 SV=1: AlkA_N: HhH-GPD\tK01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]" }, { "name":"SOIL9_73570 dna-3-methyladenine glycosylase ii : HhH-GPD superfamily base excision DNA repair protein OS=Candidatus Nitrososphaera evergladensis SR1 GN=NTE_03049 PE=4 SV=1: HhH-GPD\tK01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]" }, { "name":"SOIL9_16430 dna glycosylase : TDG\/mug DNA glycosylase family protein OS=Amycolatopsis methanolica 239 GN=mug PE=4 SV=1: UDG\tK03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]" }, { "name":"SOIL9_59510 uracil-dna glycosylase : DNA polymerase, bacteriophage-type OS=Blastopirellula marina DSM 3645 GN=DSM3645_10402 PE=4 SV=1: UDG\tK21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]" }, { "name":"SOIL9_22160 apurinic endonuclease apn1 : Probable endonuclease 4 OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=nfo PE=3 SV=1: AP_endonuc_2\tK01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]" }, { "name":"SOIL9_21510 dna polymerase i : DNA polymerase I OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3785 PE=3 SV=1: 5_3_exonuc_N: 5_3_exonuc: DNA_pol_A_exo1: DNA_pol_A\tK02335 polA; DNA polymerase I [EC:2.7.7.7]" }, { "name":"SOIL9_31620 single-stranded-dna-specific exonuclease : Exonuclease RecJ OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4350 PE=4 SV=1: DHH: DHHA1\tK07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]" }, { "name":"SOIL9_72640 nad-dependent dna ligase : DNA ligase OS=uncultured bacterium GN=ligA PE=3 SV=1: DNA_ligase_aden: DNA_ligase_OB: HHH_2: BRCT\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]" } ] }, { "name":"03420 Nucleotide excision repair [PATH:gms03420]", "children":[ { "name":"SOIL9_82110 transcription-repair coupling factor : Transcription-repair-coupling factor OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=mfd PE=3 SV=1: CarD_CdnL_TRCF: DEAD: Helicase_C: TRCF\tK03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]" }, { "name":"SOIL9_27680 excinuclease abc subunit a : Exinuclease ABC subunit A OS=Blastopirellula marina DSM 3645 GN=DSM3645_11691 PE=3 SV=1: ABC_tran: ABC_tran\tK03701 uvrA; excinuclease ABC subunit A" }, { "name":"SOIL9_48650 excinuclease abc subunit a : Excinuclease ABC, A subunit OS=Microvirga lotononidis GN=MicloDRAFT_00060470 PE=4 SV=1: ABC_tran\tK03701 uvrA; excinuclease ABC subunit A" }, { "name":"SOIL9_67580 excinuclease abc subunit b : UvrABC system protein B OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=uvrB PE=3 SV=1: ResIII: Helicase_C: UvrB: UVR\tK03702 uvrB; excinuclease ABC subunit B" }, { "name":"SOIL9_20530 excinuclease abc subunit c : Excinuclease ABC subunit C OS=Rhodopirellula maiorica SM1 GN=RMSM_06429 PE=4 SV=1: GIY-YIG: UVR\tK03703 uvrC; excinuclease ABC subunit C" }, { "name":"SOIL9_30550 excinuclease abc subunit c : UvrABC system protein C OS=Blastopirellula marina DSM 3645 GN=DSM3645_06771 PE=4 SV=1: GIY-YIG: UVR: UvrC_HhH_N\tK03703 uvrC; excinuclease ABC subunit C" }, { "name":"SOIL9_07710 atp-dependent dna helicase : DNA helicase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5592 PE=4 SV=1: UvrD-helicase: UvrD_C\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]" }, { "name":"SOIL9_21510 dna polymerase i : DNA polymerase I OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3785 PE=3 SV=1: 5_3_exonuc_N: 5_3_exonuc: DNA_pol_A_exo1: DNA_pol_A\tK02335 polA; DNA polymerase I [EC:2.7.7.7]" }, { "name":"SOIL9_72640 nad-dependent dna ligase : DNA ligase OS=uncultured bacterium GN=ligA PE=3 SV=1: DNA_ligase_aden: DNA_ligase_OB: HHH_2: BRCT\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]" }, { "name":"SOIL9_63810 type iii restriction protein res subunit : DNA\/RNA helicase, superfamily II OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6347 PE=4 SV=1: Helicase_C_3: ResIII: Helicase_C\tK10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]" } ] }, { "name":"03430 Mismatch repair [PATH:gms03430]", "children":[ { "name":"SOIL9_31790 dna mismatch repair protein : DNA mismatch repair protein MutS OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=mutS PE=3 SV=1: MutS_I: MutS_II: MutS_III: MutS_IV: MutS_V\tK03555 mutS; DNA mismatch repair protein MutS" }, { "name":"SOIL9_17030 2 family protein : Mismatch repair ATPase (MutS family) OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2874 PE=3 SV=1: MutS_III: MutS_V\tK07456 mutS2; DNA mismatch repair protein MutS2" }, { "name":"SOIL9_65160 dna mismatch repair protein : DNA mismatch repair protein MutL OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=mutL PE=3 SV=1: HATPase_c_3: DNA_mis_repair: MutL_C\tK03572 mutL; DNA mismatch repair protein MutL" }, { "name":"SOIL9_07710 atp-dependent dna helicase : DNA helicase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5592 PE=4 SV=1: UvrD-helicase: UvrD_C\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]" }, { "name":"SOIL9_66090 exodeoxyribonuclease vii large subunit : Exodeoxyribonuclease 7 large subunit OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=xseA PE=3 SV=1: tRNA_anti_2: Exonuc_VII_L: Exonuc_VII_L\tK03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]" }, { "name":"SOIL9_66100 exodeoxyribonuclease vii small subunit : Exodeoxyribonuclease 7 small subunit OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=xseB PE=3 SV=1: Exonuc_VII_S\tK03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]" }, { "name":"SOIL9_31620 single-stranded-dna-specific exonuclease : Exonuclease RecJ OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4350 PE=4 SV=1: DHH: DHHA1\tK07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]" }, { "name":"SOIL9_64920 single-stranded dna-binding protein : Single-stranded DNA-binding protein OS=Phycisphaera mikurensis (strain NBRC 102666 \/ KCTC 22515 \/ FYK2301M01) GN=ssb PE=4 SV=1: SSB\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SOIL9_64040 dna polymerase iii subunit alpha : DNA-directed DNA polymerase OS=Rhodopirellula baltica (strain SH1) GN=dnaE PE=4 SV=1: PHP: DNA_pol3_alpha: HHH_6: tRNA_anti-codon\tK02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]" }, { "name":"SOIL9_70130 dna polymerase iii subunit beta : DNA polymerase III subunit beta OS=Rhodopirellula baltica SWK14 GN=RBSWK_02256 PE=4 SV=1: DNA_pol3_beta: DNA_pol3_beta_2: DNA_pol3_beta_3\tK02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]" }, { "name":"SOIL9_28290 dna polymerase iii subunit gamma tau : DNA polymerase III gamma and tau subunits OS=Blastopirellula marina DSM 3645 GN=DSM3645_28667 PE=4 SV=1: DNA_pol3_delta2: DNA_pol3_gamma3\tK02343 dnaX; DNA polymerase III subunit gamma\/tau [EC:2.7.7.7]" }, { "name":"SOIL9_47050 dna polymerase iii subunit delta : DNA polymerase III, delta subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2977 PE=4 SV=1: DNA_pol3_delta\tK02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]" }, { "name":"SOIL9_17600 dna polymerase iii subunit delta : DNA polymerase III, delta'' subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4806 PE=4 SV=1: DNA_pol3_delta2\tK02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]" }, { "name":"SOIL9_06100 exonuclease : Exonuclease OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_2401 PE=4 SV=1: RNase_T\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]" }, { "name":"SOIL9_72640 nad-dependent dna ligase : DNA ligase OS=uncultured bacterium GN=ligA PE=3 SV=1: DNA_ligase_aden: DNA_ligase_OB: HHH_2: BRCT\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]" }, { "name":"SOIL9_25770 d12 class n6 adenine-specific dna methyltransferase : D12 class N6 adenine-specific DNA methyltransferase OS=Rhodopirellula sallentina SM41 GN=RSSM_03350 PE=4 SV=1: MethyltransfD12\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]" }, { "name":"SOIL9_25780 d12 class n6 adenine-specific dna methyltransferase : D12 class N6 adenine-specific DNA methyltransferase OS=Rhodopirellula sallentina SM41 GN=RSSM_03350 PE=4 SV=1: MethyltransfD12\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]" }, { "name":"SOIL9_78330 d12 class n6 adenine-specific dna methyltransferase : D12 class N6 adenine-specific DNA methyltransferase OS=Rhodopirellula sallentina SM41 GN=RSSM_03350 PE=4 SV=1: MethyltransfD12: MethyltransfD12\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]" } ] }, { "name":"03440 Homologous recombination [PATH:gms03440]", "children":[ { "name":"SOIL9_31620 single-stranded-dna-specific exonuclease : Exonuclease RecJ OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4350 PE=4 SV=1: DHH: DHHA1\tK07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]" }, { "name":"SOIL9_64920 single-stranded dna-binding protein : Single-stranded DNA-binding protein OS=Phycisphaera mikurensis (strain NBRC 102666 \/ KCTC 22515 \/ FYK2301M01) GN=ssb PE=4 SV=1: SSB\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SOIL9_31030 dna repair protein : DNA repair protein RecO OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=recO PE=3 SV=1: RecO_N: RecO_C\tK03584 recO; DNA repair protein RecO (recombination protein O)" }, { "name":"SOIL9_28260 recombination protein : Recombination protein RecR OS=Planctomyces maris DSM 8797 GN=recR PE=3 SV=1: HHH: RecR: Toprim_4\tK06187 recR; recombination protein RecR" }, { "name":"SOIL9_65450 recombinase : Protein RecA OS=uncultured planctomycete GN=recA PE=3 SV=1: RecA\tK03553 recA; recombination protein RecA" }, { "name":"SOIL9_21510 dna polymerase i : DNA polymerase I OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3785 PE=3 SV=1: 5_3_exonuc_N: 5_3_exonuc: DNA_pol_A_exo1: DNA_pol_A\tK02335 polA; DNA polymerase I [EC:2.7.7.7]" }, { "name":"SOIL9_69880 holliday junction dna helicase ruva : Holliday junction ATP-dependent DNA helicase RuvA OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=ruvA PE=3 SV=1\tK03550 ruvA; holliday junction DNA helicase RuvA" }, { "name":"SOIL9_75800 dna polymerase iii : DNA polymerase beta family protein OS=Planctomyces maris DSM 8797 GN=PM8797T_21363 PE=4 SV=1: HHH_8\tK03550 ruvA; holliday junction DNA helicase RuvA" }, { "name":"SOIL9_69900 holliday junction dna helicase : Holliday junction ATP-dependent DNA helicase RuvB OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ruvB PE=3 SV=1: RuvB_N: RuvB_C\tK03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]" }, { "name":"SOIL9_69870 crossover junction endodeoxyribonuclease : Crossover junction endodeoxyribonuclease RuvC OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=ruvC PE=3 SV=1: RuvC\tK01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]" }, { "name":"SOIL9_34340 dna helicase : RecD\/TraA-family helicase OS=Octadecabacter antarcticus 307 GN=OAN307_c08020 PE=4 SV=1: HHH_4: AAA_30: UvrD_C_2\tK03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]" }, { "name":"SOIL9_64040 dna polymerase iii subunit alpha : DNA-directed DNA polymerase OS=Rhodopirellula baltica (strain SH1) GN=dnaE PE=4 SV=1: PHP: DNA_pol3_alpha: HHH_6: tRNA_anti-codon\tK02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]" }, { "name":"SOIL9_70130 dna polymerase iii subunit beta : DNA polymerase III subunit beta OS=Rhodopirellula baltica SWK14 GN=RBSWK_02256 PE=4 SV=1: DNA_pol3_beta: DNA_pol3_beta_2: DNA_pol3_beta_3\tK02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]" }, { "name":"SOIL9_28290 dna polymerase iii subunit gamma tau : DNA polymerase III gamma and tau subunits OS=Blastopirellula marina DSM 3645 GN=DSM3645_28667 PE=4 SV=1: DNA_pol3_delta2: DNA_pol3_gamma3\tK02343 dnaX; DNA polymerase III subunit gamma\/tau [EC:2.7.7.7]" }, { "name":"SOIL9_47050 dna polymerase iii subunit delta : DNA polymerase III, delta subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2977 PE=4 SV=1: DNA_pol3_delta\tK02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]" }, { "name":"SOIL9_17600 dna polymerase iii subunit delta : DNA polymerase III, delta'' subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4806 PE=4 SV=1: DNA_pol3_delta2\tK02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]" }, { "name":"SOIL9_06100 exonuclease : Exonuclease OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_2401 PE=4 SV=1: RNase_T\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]" }, { "name":"SOIL9_50540 primosomal protein n : Primosomal protein N OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2695 PE=4 SV=1: DEAD: Helicase_C\tK04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]" } ] }, { "name":"03450 Non-homologous end-joining" }, { "name":"03460 Fanconi anemia pathway" } ] }, { "name":"09126 Chromosome", "children":[ { "name":"03082 ATP-dependent chromatin remodeling" }, { "name":"03083 Polycomb repressive complex", "children":[ { "name":"SOIL9_69120 tpr repeat-containing protein : TPR repeat-containing protein OS=Thioploca ingrica GN=THII_3940 PE=4 SV=1: TPR_11: TPR_11: TPR_2: TPR_11: TPR_1: Glyco_transf_41: Glyco_transf_41\tK09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]" } ] } ] }, { "name":"09125 Information processing in viruses", "children":[ { "name":"03230 Viral genome structure" }, { "name":"03240 Viral replication" }, { "name":"03250 Viral life cycle - HIV-1 [PATH:gms03250]", "children":[ { "name":"SOIL9_12550 peptidyl-prolyl cis-trans isomerase : Peptidyl-prolyl cis-trans isomerase, cyclophilin type OS=Fimbriimonas ginsengisoli Gsoil 348 GN=OP10G_4301 PE=3 SV=1: Pro_isomerase\tK03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]" } ] }, { "name":"03260 Virion - Human immunodeficiency virus" }, { "name":"03271 Virion - Rotavirus" }, { "name":"03262 Virion - Coronavirus" }, { "name":"03261 Virion - Influenza virus" }, { "name":"03263 Virion - Enterovirus" }, { "name":"03264 Virion - Flavivirus and Alphavirus" }, { "name":"03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus" }, { "name":"03273 Virion - Lassa virus and SFTS virus" }, { "name":"03272 Virion - Hepatitis viruses", "children":[ { "name":"SOIL9_39700 peptidase s9 : Peptidase S9B dipeptidylpeptidase IV domain protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1654 PE=4 SV=1: Peptidase_M14: DPPIV_N: Peptidase_S9\tK01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]" }, { "name":"SOIL9_47500 peptidase s9 : Peptidase S9B dipeptidylpeptidase IV domain protein OS=Gemmatimonadetes bacterium KBS708 GN=J421_1372 PE=4 SV=1: DPPIV_N: Peptidase_S9\tK01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]" }, { "name":"SOIL9_59980 peptidase s9 : Dipeptidyl aminopeptidase OS=Microscilla marina ATCC 23134 GN=M23134_06058 PE=4 SV=1: DPPIV_N: Peptidase_S9\tK01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]" }, { "name":"SOIL9_73160 dipeptidyl peptidase iv : Gll3871 protein OS=Gloeobacter violaceus (strain PCC 7421) GN=gll3871 PE=4 SV=1: DPPIV_N: Peptidase_S9\tK01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]" } ] }, { "name":"03266 Virion - Herpesvirus" }, { "name":"03268 Virion - Orthopoxvirus" }, { "name":"03267 Virion - Adenovirus" }, { "name":"03259 Virion - Bacteriophages T4 and T7" }, { "name":"03258 Virion - Bacteriophage lambda" } ] } ] }, { "name":"09130 Environmental Information Processing", "children":[ { "name":"09131 Membrane transport", "children":[ { "name":"02010 ABC transporters [PATH:gms02010]", "children":[ { "name":"SOIL9_18390 abc transporter permease : Sulfate transporter subunit OS=Massilia consociata GN=JN27_15615 PE=4 SV=1: SBP_bac_11\tK23163 sbp; sulfate\/thiosulfate transport system substrate-binding protein" }, { "name":"SOIL9_21560 sulfate thiosulfate transporter subunit : Sulfate\/thiosulfate transporter subunit OS=Mesorhizobium sp. L48C026A00 GN=X737_29710 PE=4 SV=1: BPD_transp_1\tK02046 cysU; sulfate\/thiosulfate transport system permease protein" }, { "name":"SOIL9_21570 sulfate abc permease : Sulfate ABC transporter, permease CysW OS=Acinetobacter nectaris CIP 110549 GN=P256_00304 PE=4 SV=1: BPD_transp_1\tK02047 cysW; sulfate\/thiosulfate transport system permease protein" }, { "name":"SOIL9_21580 sulfate abc transporter : Sulfate\/thiosulfate import ATP-binding protein CysA OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=cysA PE=3 SV=1: ABC_tran: TOBE_3\tK02045 cysA; sulfate\/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]" }, { "name":"SOIL9_20810 NMT1\/THI5 like domain protein OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD2548 PE=4 SV=1: NMT1_2\tK15553 ssuA; sulfonate transport system substrate-binding protein" }, { "name":"SOIL9_20820 abc transporter permease : Binding-protein-dependent transport systems inner membrane component OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD2549 PE=3 SV=1: BPD_transp_1\tK15554 ssuC; sulfonate transport system permease protein" }, { "name":"SOIL9_20830 abc transporter atp-binding protein : ABC transporter related-protein OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD2550 PE=3 SV=1: ABC_tran\tK15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]" }, { "name":"SOIL9_04110 molybdenum abc periplasmic molybdate-binding protein : Molybdenum ABC transporter, periplasmic molybdate-binding protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_03582 PE=4 SV=1: SBP_bac_11\tK02020 modA; molybdate transport system substrate-binding protein" }, { "name":"SOIL9_04100 -like abc-type porter : ABC-type molybdate transport system, permease component OS=Planctomyces maris DSM 8797 GN=PM8797T_31633 PE=3 SV=1: BPD_transp_1\tK02018 modB; molybdate transport system permease protein" }, { "name":"SOIL9_68630 sulfate abc transporter atpase : ABC-type sulfate transport system, ATPase component OS=Planctomyces maris DSM 8797 GN=PM8797T_31628 PE=4 SV=1: ABC_tran\tK02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]" }, { "name":"SOIL9_42640 abc transporter : Uncharacterized protein OS=Mucor circinelloides f. circinelloides (strain 1006PhL) GN=HMPREF1544_02450 PE=4 SV=1: ABC_tran: ABC_tran\tK05776 modF; molybdate transport system ATP-binding protein" }, { "name":"SOIL9_20640 amino acid abc transporter permease : Glycine betaine\/L-proline ABC transporter permease and substrate-binding protein OS=Myxococcus fulvus (strain ATCC BAA-855 \/ HW-1) GN=LILAB_05845 PE=3 SV=1: OpuAC: BPD_transp_1\tK05845 opuC; osmoprotectant transport system substrate-binding protein" }, { "name":"SOIL9_20650 abc transporter atp-binding protein : ABC transporter ATP-binding protein OS=Cystobacter violaceus Cb vi76 GN=Q664_24865 PE=4 SV=1: ABC_tran\tK05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]" }, { "name":"SOIL9_39900 Hypothetical conserved protein OS=uncultured planctomycete GN=HGMM_F09D09C20 PE=4 SV=1: MCE\tK02067 mlaD; phospholipid\/cholesterol\/gamma-HCH transport system substrate-binding protein" }, { "name":"SOIL9_72670 ABC-type transport system involved in resistance to organic solvents, periplasmic component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1321 PE=4 SV=1: MCE: OmpA\tK02067 mlaD; phospholipid\/cholesterol\/gamma-HCH transport system substrate-binding protein" }, { "name":"SOIL9_27240 abc transporter permease : ABC-type transport system involved in resistance to organic solvents, permease component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1322 PE=4 SV=1: Permease\tK02066 mlaE; phospholipid\/cholesterol\/gamma-HCH transport system permease protein" }, { "name":"SOIL9_51280 abc transporter permease : Conserved hypothetical integral membrane protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1531 PE=4 SV=1: Permease\tK02066 mlaE; phospholipid\/cholesterol\/gamma-HCH transport system permease protein" }, { "name":"SOIL9_08400 abc atp-binding protein : ABC transporter related protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1751 PE=3 SV=1: ABC_tran\tK02065 mlaF; phospholipid\/cholesterol\/gamma-HCH transport system ATP-binding protein" }, { "name":"SOIL9_18680 Periplasmic binding protein domain protein OS=Gemmatimonadetes bacterium KBS708 GN=J421_5609 PE=4 SV=1: Peripla_BP_4\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"SOIL9_47440 Monosaccharide ABC transporter substrate-binding protein, CUT2 family OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_3304 PE=4 SV=1: Peripla_BP_4\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"SOIL9_18710 ribose abc transporter permease : Monosaccharide-transporting ATPase OS=Opitutus terrae (strain DSM 11246 \/ PB90-1) GN=Oter_3322 PE=4 SV=1: BPD_transp_2\tK10440 rbsC; ribose transport system permease protein" }, { "name":"SOIL9_47420 sugar abc transporter permease : Inner-membrane translocator OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0780 PE=4 SV=1: BPD_transp_2\tK10440 rbsC; ribose transport system permease protein" }, { "name":"SOIL9_18700 sugar abc transporter : ABC-type sugar transport system, ATPase component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2682 PE=3 SV=1: ABC_tran: ABC_tran\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"SOIL9_47430 d-ribose transporter atp binding protein : Ribose import ATP-binding protein RbsA OS=Blastopirellula marina DSM 3645 GN=rbsA PE=3 SV=1: ABC_tran: ABC_tran\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"SOIL9_32740 phosphate abc transporter substrate-binding protein : Phosphate-binding protein OS=Desulfosporosinus meridiei (strain ATCC BAA-275 \/ DSM 13257 \/ NCIMB 13706 \/ S10) GN=Desmer_2752 PE=3 SV=1: PBP_like_2\tK02040 pstS; phosphate transport system substrate-binding protein" }, { "name":"SOIL9_32750 phosphate abc transporter permease : Phosphate ABC transporter, permease protein PstC \/ phosphate ABC transporter, permease protein PstA multi-domain protein OS=Bordetella holmesii CDC-H635-BH GN=L499_A0942 PE=3 SV=1: BPD_transp_1: BPD_transp_1\tK02037 pstC; phosphate transport system permease protein" }, { "name":"SOIL9_73270 phosphate abc transporter atp-binding protein : Phosphate import ATP-binding protein PstB OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=pstB PE=3 SV=1: ABC_tran\tK02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]" }, { "name":"SOIL9_34300 extracellular ligand-binding receptor : Uncharacterized protein OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 \/ DSM 11347 \/ YP87) GN=THEYE_A0613 PE=4 SV=1: Peripla_BP_6\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SOIL9_56310 Extracellular ligand-binding receptor OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4547 PE=4 SV=1: Peripla_BP_6\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SOIL9_56320 Extracellular ligand-binding receptor OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4547 PE=4 SV=1: Peripla_BP_6\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SOIL9_56330 abc transporter permease : Inner-membrane translocator OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4548 PE=4 SV=1: BPD_transp_2\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"SOIL9_56340 inner-membrane translocator : Inner-membrane translocator OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4549 PE=4 SV=1: BPD_transp_2\tK01998 livM; branched-chain amino acid transport system permease protein" }, { "name":"SOIL9_56350 branched-chain amino acid abc transporter atp-binding protein : ABC transporter related protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4550 PE=4 SV=1: ABC_tran: ABC_tran: BCA_ABC_TP_C\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"SOIL9_56360 amino acid abc transporter atpase : ABC transporter related protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4551 PE=3 SV=1: ABC_tran\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"SOIL9_40060 metal abc transporter substrate-binding protein : Periplasmic solute binding protein OS=Cyanothece sp. (strain PCC 7425 \/ ATCC 29141) GN=Cyan7425_1915 PE=3 SV=1: TroA\tK09815 znuA; zinc transport system substrate-binding protein" }, { "name":"SOIL9_27550 zinc abc transporter permease : Zinc transport system permease OS=Bilophila wadsworthia 3_1_6 GN=HMPREF0179_01000 PE=3 SV=1: ABC-3\tK09816 znuB; zinc transport system permease protein" }, { "name":"SOIL9_40070 abc transporter atp-binding protein : Zinc transport system ATP-binding protein OS=uncultured planctomycete GN=HGMM_F33C03C09 PE=3 SV=1: ABC_tran\tK09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]" }, { "name":"SOIL9_17040 cobalamin (vitamin b12) biosynthesis protein : Cobalamin (Vitamin B12) biosynthesis CbiM protein OS=Methanosaeta harundinacea (strain 6Ac) GN=Mhar_2290 PE=4 SV=1: CbiM\tK02007 cbiM; cobalt\/nickel transport system permease protein" }, { "name":"SOIL9_05680 cobalt abc transporter permease : Putative cobalt transport protein, cbiQ family OS=uncultured archaeon GN=cbiQ PE=4 SV=1: CbiQ\tK02008 cbiQ; cobalt\/nickel transport system permease protein" }, { "name":"SOIL9_05690 cobalt abc transporter atp-binding protein : ABC-type cobalt transport system, ATPase component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0844 PE=3 SV=1: ABC_tran\tK02006 cbiO; cobalt\/nickel transport system ATP-binding protein" }, { "name":"SOIL9_69410 Uncharacterized protein OS=Thermovibrio ammonificans (strain DSM 15698 \/ JCM 12110 \/ HB-1) GN=Theam_1524 PE=4 SV=1: CarboxypepD_reg\tK16915 cbiL; nickel transport protein" }, { "name":"SOIL9_68580 unnamed protein product; BLAST_uniprot: no_hits\tK16785 ecfT; energy-coupling factor transport system permease protein" }, { "name":"SOIL9_26590 abc-2 type transporter family protein : Transport permease protein OS=Delftia acidovorans CCUG 274B GN=HMPREF9701_00582 PE=3 SV=1: ABC2_membrane\tK09690 wzm; homopolymeric O-antigen transport system permease protein" }, { "name":"SOIL9_39260 abc transporter permease : ABC-2 type transporter family protein OS=Vibrio cholerae GN=DN34_2545 PE=4 SV=1: ABC2_membrane\tK09690 wzm; homopolymeric O-antigen transport system permease protein" }, { "name":"SOIL9_83920 phosphate abc transporter permease : Transport permease protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2461 PE=3 SV=1: ABC2_membrane\tK09690 wzm; homopolymeric O-antigen transport system permease protein" }, { "name":"SOIL9_26580 sugar abc transporter : Sugar ABC transporter OS=Clostridium butyricum GN=OA81_18585 PE=4 SV=1: ABC_tran\tK09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]" }, { "name":"SOIL9_83930 abc transporter : ABC transporter, ATP-binding protein OS=Geobacter sulfurreducens (strain ATCC 51573 \/ DSM 12127 \/ PCA) GN=xapH PE=4 SV=1: ABC_tran: Wzt_C\tK09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]" }, { "name":"SOIL9_67790 ABC-type Na+ efflux pump, permease component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6077 PE=4 SV=1: ABC2_membrane_2\tK09696 natB; sodium transport system permease protein" }, { "name":"SOIL9_68370 abc transporter atp-binding protein : Sulfate-transporting ATPase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_1301 PE=4 SV=1: ABC_tran\tK09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]" }, { "name":"SOIL9_54440 membrane protein : ABC-type transport system, involved in lipoprotein release, permease component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5022 PE=4 SV=1: FtsX\tK09808 lolC_E_F; lipoprotein-releasing system permease protein" }, { "name":"SOIL9_10450 lipoprotein releasing system atp-binding protein lold : Lipoprotein-releasing system ATP-binding protein LolD OS=Planctomyces maris DSM 8797 GN=lolD PE=3 SV=1: ABC_tran\tK09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]" }, { "name":"SOIL9_54450 lipoprotein releasing system atp-binding protein : Lipoprotein-releasing system ATP-binding protein LolD OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=lolD PE=3 SV=1: ABC_tran\tK09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]" }, { "name":"SOIL9_82130 permease family protein : Putative permease OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2241 PE=4 SV=1: YjgP_YjgQ\tK07091 lptF; lipopolysaccharide export system permease protein" }, { "name":"SOIL9_17080 permease family protein : Putative permease OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2240 PE=4 SV=1: YjgP_YjgQ\tK11720 lptG; lipopolysaccharide export system permease protein" }, { "name":"SOIL9_67990 abc transporter : ABC-type (Unclassified) transport system, ATPase component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1883 PE=3 SV=1: ABC_tran\tK06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]" }, { "name":"SOIL9_09550 lipid a export atp-binding permease protein : ABC-type multidrug transport system, ATPase and permease component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2921 PE=3 SV=1: ABC_membrane: ABC_tran\tK11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]" } ] }, { "name":"02060 Phosphotransferase system (PTS) [PATH:gms02060]", "children":[ { "name":"SOIL9_23430 phosphoenolpyruvate-protein phosphotransferase : Phosphoenolpyruvate-protein phosphotransferase OS=uncultured planctomycete GN=HGMM_F07G10C17 PE=3 SV=1: PEP-utilisers_N: PEP-utilizers: PEP-utilizers_C\tK08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]" }, { "name":"SOIL9_23420 phosphotransferase hpr-related protein : Phosphocarrier protein HPr OS=Neisseria weaveri LMG 5135 GN=l11_01330 PE=4 SV=1: PTS-HPr\tK02784 ptsH; phosphocarrier protein HPr" }, { "name":"SOIL9_23410 pts iia-like nitrogen-regulatory protein : PTS system, fructose-specific IIA component OS=uncultured planctomycete GN=HGMM_F07G10C19 PE=4 SV=1: PTS_EIIA_2\tK02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]" } ] }, { "name":"03070 Bacterial secretion system [PATH:gms03070]", "children":[ { "name":"SOIL9_07680 outer membrane efflux protein : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_09634 PE=4 SV=1: OEP\tK12340 tolC; outer membrane protein" }, { "name":"SOIL9_58850 type iv pilus biogenesis protein : Type II secretion system F domain protein OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_3183 PE=3 SV=1: T2SF: T2SF\tK02455 gspF; general secretion pathway protein F" }, { "name":"SOIL9_58840 general secretion pathway protein g : General secretion pathway protein G OS=Sphingobium yanoikuyae ATCC 51230 GN=HMPREF9718_03863 PE=4 SV=1: N_methyl_2: T2SG\tK02456 gspG; general secretion pathway protein G" }, { "name":"SOIL9_58830 tfp pilus assembly protein : Uncharacterized protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3670 PE=4 SV=1: N_methyl\tK02457 gspH; general secretion pathway protein H" }, { "name":"SOIL9_58820 Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_14304 PE=4 SV=1\tK02458 gspI; general secretion pathway protein I" }, { "name":"SOIL9_58860 general secretion pathway protein e : General secretion pathway protein E OS=Blastopirellula marina DSM 3645 GN=DSM3645_27388 PE=4 SV=1: T2SE_Nter: T2SE\tK02454 gspE; general secretion pathway protein E [EC:7.4.2.8]" }, { "name":"SOIL9_50320 protein-export membrane protein secd : Protein-export membrane protein SecD OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1349 PE=3 SV=1: SecD_SecF: SecD_SecF\tK12257 secDF; SecD\/SecF fusion protein" }, { "name":"SOIL9_84220 unnamed protein product; BLAST_uniprot: no_hits\tK03073 secE; preprotein translocase subunit SecE" }, { "name":"SOIL9_59730 preprotein translocase subunit : : SecG\tK03075 secG; preprotein translocase subunit SecG" }, { "name":"SOIL9_84770 preprotein translocase subunit : Protein translocase subunit SecY OS=Planctomyces maris DSM 8797 GN=secY PE=3 SV=1: SecY\tK03076 secY; preprotein translocase subunit SecY" }, { "name":"SOIL9_50330 Preprotein translocase subunit YajC OS=Hyphomonas johnsonii MHS-2 GN=HJO_05365 PE=4 SV=1: YajC\tK03210 yajC; preprotein translocase subunit YajC" }, { "name":"SOIL9_46890 60 kda inner membrane insertion protein : Membrane protein insertase YidC OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=yidC PE=3 SV=1: YidC_periplas: 60KD_IMP\tK03217 yidC; YidC\/Oxa1 family membrane protein insertase" }, { "name":"SOIL9_72400 preprotein translocase subunit : Protein translocase subunit SecA OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=secA PE=3 SV=1: SecA_DEAD: SecA_PP_bind: SecA_SW: SecA_SW: SEC-C\tK03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]" }, { "name":"SOIL9_76520 preprotein translocase subunit : Protein translocase subunit SecA OS=uncultured planctomycete GN=secA PE=3 SV=1: SecA_DEAD: SecA_PP_bind\tK03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]" }, { "name":"SOIL9_22370 cell division protein : Signal recognition particle receptor FtsY OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ftsY PE=3 SV=1: SRP54_N: SRP54\tK03110 ftsY; fused signal recognition particle receptor" }, { "name":"SOIL9_40150 signal recognition particle protein : Signal recognition particle protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=ffh PE=3 SV=1: SRP54_N: SRP54: SRP_SPB\tK03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]" }, { "name":"SOIL9_25690 twin-arginine translocation e family subunit : Sec-independent protein translocase protein TatA OS=Phycisphaera mikurensis (strain NBRC 102666 \/ KCTC 22515 \/ FYK2301M01) GN=tatA PE=3 SV=1: MttA_Hcf106\tK03116 tatA; sec-independent protein translocase protein TatA" }, { "name":"SOIL9_00100 unnamed protein product; BLAST_uniprot: no_hits\tK03117 tatB; sec-independent protein translocase protein TatB" }, { "name":"SOIL9_34100 sec-independent protein subunit : Sec-independent protein translocase protein TatC OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=tatC PE=3 SV=1: TatC\tK03118 tatC; sec-independent protein translocase protein TatC" }, { "name":"SOIL9_79160 Uncharacterized protein OS=Azorhizobium caulinodans (strain ATCC 43989 \/ DSM 5975 \/ ORS 571) GN=AZC_2592 PE=4 SV=1: Phage_GPD: Phage_base_V\tK11904 vgrG; type VI secretion system secreted protein VgrG" }, { "name":"SOIL9_79170 Uncharacterized protein OS=Azospirillum lipoferum (strain 4B) GN=AZOLI_1016 PE=4 SV=1: DUF796\tK11903 hcp; type VI secretion system secreted protein Hcp" }, { "name":"SOIL9_85180 Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_11302 PE=4 SV=1: DUF2077\tK11892 impK; type VI secretion system protein ImpK" }, { "name":"SOIL9_67410 atpase aaa : Type VI secretion system family protein OS=Acidocella sp. MX-AZ02 GN=MXAZACID_08861 PE=4 SV=1: Clp_N: AAA: AAA_2: ClpB_D2-small\tK11907 vasG; type VI secretion system protein VasG" }, { "name":"SOIL9_31690 serine threonine protein kinase : Putative serine\/threonine protein kinase OS=Gemmata sp. Wa1-1 PE=4 SV=1: Pkinase\tK11912 ppkA; serine\/threonine-protein kinase PpkA [EC:2.7.11.1]" } ] } ] }, { "name":"09132 Signal transduction", "children":[ { "name":"02020 Two-component system [PATH:gms02020]", "children":[ { "name":"SOIL9_03140 family transcriptional regulator : Two component transcriptional regulator, winged helix family OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0022 PE=4 SV=1: Response_reg: Trans_reg_C\tK07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB" }, { "name":"SOIL9_22500 alkaline phosphatase : Phosphodiesterase\/alkaline phosphatase D OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7244 PE=4 SV=1: PhoD\tK01113 phoD; alkaline phosphatase D [EC:3.1.3.1]" }, { "name":"SOIL9_34920 alkaline phosphatase : Phosphodiesterase\/alkaline phosphatase D OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7244 PE=4 SV=1: PhoD\tK01113 phoD; alkaline phosphatase D [EC:3.1.3.1]" }, { "name":"SOIL9_32740 phosphate abc transporter substrate-binding protein : Phosphate-binding protein OS=Desulfosporosinus meridiei (strain ATCC BAA-275 \/ DSM 13257 \/ NCIMB 13706 \/ S10) GN=Desmer_2752 PE=3 SV=1: PBP_like_2\tK02040 pstS; phosphate transport system substrate-binding protein" }, { "name":"SOIL9_10890 pdz dhr glgf domain protein : PDZ\/DHR\/GLGF domain protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3926 PE=4 SV=1: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_14020 peptidase s1 and s6 chymotrypsin hap : Peptidase S1 and S6 chymotrypsin\/Hap OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1379 PE=4 SV=1: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_19300 pdz dhr glgf domain-containing protein : Trypsin-like serine protease with C-terminal PDZ domain OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5148 PE=4 SV=1: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_24480 serine protease : Serine protease OS=Azospirillum brasilense GN=ABAZ39_16055 PE=4 SV=1: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_27940 protease do : Serine protease, trypsin family OS=uncultured planctomycete GN=HGMM_F01A04C13 PE=4 SV=1: Trypsin_2: PDZ_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_42480 protease do : Protease Do OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1472 PE=4 SV=1: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_48370 peptidase s1 and s6 chymotrypsin hap : Peptidase S1 and S6 chymotrypsin\/Hap OS=Akkermansia muciniphila CAG:154 GN=BN502_00546 PE=4 SV=1: Trypsin_2: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_63250 serine protease : HtrA2 peptidase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1243 PE=4 SV=1: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_78250 unnamed protein product; BLAST_uniprot: no_hits\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_82080 serine protease : Putative periplasmic serine endoprotease DegP-like OS=alpha proteobacterium Q-1 GN=htrA PE=4 SV=1: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_34570 rnd transporter : Efflux transporter, RND family, MFP subunit OS=Desulfobacca acetoxidans (strain ATCC 700848 \/ DSM 11109 \/ ASRB2) GN=Desac_1403 PE=4 SV=1: HlyD\tK07799 mdtA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_34580 acriflavin resistance protein : Acriflavin resistance protein OS=Geobacter uraniireducens (strain Rf4) GN=Gura_2371 PE=4 SV=1: ACR_tran\tK07788 mdtB; multidrug efflux pump" }, { "name":"SOIL9_78390 histidine kinase : Histidine kinase OS=Hyphomicrobium denitrificans 1NES1 GN=HYPDE_40403 PE=4 SV=1: 2CSK_N: HAMP: HisKA: HATPase_c\tK07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]" }, { "name":"SOIL9_24510 transcriptional regulator : Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0888 PE=4 SV=1: Response_reg: Trans_reg_C\tK07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR" }, { "name":"SOIL9_78400 transcriptional regulator : DNA-binding heavy metal response regulator (Fragment) OS=mine drainage metagenome GN=B2A_07583 PE=4 SV=1: Response_reg: Trans_reg_C\tK07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR" }, { "name":"SOIL9_13110 protein containing flagellin : Flagellar protein OS=Geobacillus sp. A8 GN=GA8_04200 PE=4 SV=1: Flagellin_N: Flagellin_C\tK02406 fliC; flagellin" }, { "name":"SOIL9_13380 rna sigma 28 : RNA polymerase sigma factor for flagellar operon FliA OS=uncultured planctomycete GN=HGMM_F11F07C13 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2\tK02405 fliA; RNA polymerase sigma factor FliA" }, { "name":"SOIL9_67350 rna polymerase sigma70 : RNA polymerase sigma factor OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7408 PE=3 SV=1: Sigma70_r2: Sigma70_r3: Sigma70_r4\tK02405 fliA; RNA polymerase sigma factor FliA" }, { "name":"SOIL9_13360 flagellar motor protein : MotA\/TolQ\/ExbB proton channel OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2583 PE=4 SV=1: MotA_ExbB\tK02556 motA; chemotaxis protein MotA" }, { "name":"SOIL9_02650 histidine kinase : Osmosensitive K+ channel His kinase sensor OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5539 PE=4 SV=1: KdpD: Usp\tK07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]" }, { "name":"SOIL9_02690 potassium-transporting atpase subunit a : Potassium-transporting ATPase A chain OS=Burkholderia sp. MSh2 GN=kdpA PE=3 SV=1: KdpA\tK01546 kdpA; potassium-transporting ATPase potassium-binding subunit" }, { "name":"SOIL9_02700 potassium-transporting atpase subunit b : Potassium-transporting ATPase B chain OS=Burkholderia sp. MSh2 GN=kdpB PE=3 SV=1: E1-E2_ATPase: Hydrolase\tK01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]" }, { "name":"SOIL9_02710 potassium transporter : K transporting ATPase KdpC subunit OS=Burkholderia sp. H160 GN=BH160DRAFT_1372 PE=4 SV=1: KdpC: KdpC\tK01548 kdpC; potassium-transporting ATPase KdpC subunit" }, { "name":"SOIL9_53570 Cytochrome oxidase assembly OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_2264 PE=4 SV=1: COX15-CtaA: COX15-CtaA\tK02259 COX15; heme a synthase [EC:1.17.99.9]" }, { "name":"SOIL9_70140 chromosomal replication initiator protein : Chromosomal replication initiator protein dnaA (Fragment) OS=Micromonospora sp. M42 GN=MCBG_03933 PE=3 SV=1: Bac_DnaA: Bac_DnaA_C\tK02313 dnaA; chromosomal replication initiator protein" }, { "name":"SOIL9_72520 chromosomal replication initiator protein : Chromosomal replication initiator protein dnaA OS=uncultured Acidobacteria bacterium A2 PE=3 SV=1: Bac_DnaA: Bac_DnaA_C\tK02313 dnaA; chromosomal replication initiator protein" }, { "name":"SOIL9_84570 response regulator : Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7219 PE=4 SV=1: Response_reg: Trans_reg_C\tK11329 rpaB; two-component system, OmpR family, response regulator RpaB" }, { "name":"SOIL9_09490 Endonuclease\/exonuclease\/phosphatase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_3201 PE=4 SV=1: Exo_endo_phos\tK18353 vanJ; vancomycin resistance protein VanJ" }, { "name":"SOIL9_11440 triphosphoribosyl-dephospho-protein : Triphosphoribosyl-dephospho-CoA synthase OS=Gemmata sp. Wa1-1 PE=4 SV=1: CitG\tK05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]" }, { "name":"SOIL9_68370 abc transporter atp-binding protein : Sulfate-transporting ATPase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_1301 PE=4 SV=1: ABC_tran\tK09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]" }, { "name":"SOIL9_67790 ABC-type Na+ efflux pump, permease component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6077 PE=4 SV=1: ABC2_membrane_2\tK09696 natB; sodium transport system permease protein" }, { "name":"SOIL9_82430 transporter : Nitrate\/nitrite transporter OS=Desulfomonile tiedjei (strain ATCC 49306 \/ DSM 6799 \/ DCB-1) GN=Desti_1770 PE=4 SV=1: MFS_1\tK08177 oxlT; MFS transporter, OFA family, oxalate\/formate antiporter" }, { "name":"SOIL9_50980 carbon storage regulator : Carbon storage regulator homolog OS=Rhodopirellula sp. SWK7 GN=csrA PE=3 SV=1: CsrA\tK03563 csrA; carbon storage regulator" }, { "name":"SOIL9_63680 carbon storage regulator : Carbon storage regulator CsrA OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6732 PE=4 SV=1: CsrA\tK03563 csrA; carbon storage regulator" }, { "name":"SOIL9_75660 carbon storage regulator : Carbon storage regulator homolog OS=Caloranaerobacter azorensis H53214 GN=csrA PE=3 SV=1: CsrA\tK03563 csrA; carbon storage regulator" }, { "name":"SOIL9_26350 Flp\/Fap pilin component OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0134 PE=4 SV=1: Flp_Fap\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"SOIL9_32450 Flp\/Fap pilin component OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0134 PE=4 SV=1: Flp_Fap\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"SOIL9_32460 Flp\/Fap pilin component OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0134 PE=4 SV=1: Flp_Fap\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"SOIL9_59840 Flp\/Fap pilin component OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0134 PE=4 SV=1: Flp_Fap\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"SOIL9_59850 Flp\/Fap pilin component OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0134 PE=4 SV=1: Flp_Fap\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"SOIL9_59880 Flp pilus assembly protein CpaB OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_1524 PE=4 SV=1: SAF_2: SAF\tK02279 cpaB; pilus assembly protein CpaB" }, { "name":"SOIL9_59890 type ii and iii secretion system protein : Type II and III secretion system protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2076 PE=4 SV=1: Secretin\tK02280 cpaC; pilus assembly protein CpaC" }, { "name":"SOIL9_59900 response regulator receiver protein : Response regulator receiver protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2077 PE=4 SV=1: Response_reg: AAA_31\tK02282 cpaE; pilus assembly protein CpaE" }, { "name":"SOIL9_63820 Uncharacterized protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_3714 PE=4 SV=1: AAA_31\tK02282 cpaE; pilus assembly protein CpaE" }, { "name":"SOIL9_59910 type ii secretion system protein e : Type II secretion system protein E OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1434 PE=4 SV=1: T2SE\tK02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]" }, { "name":"SOIL9_63830 type ii secretion system protein e : Type II secretion system protein E OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1434 PE=4 SV=1: T2SE\tK02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]" }, { "name":"SOIL9_77010 Type II\/IV secretion system protein, TadA subfamily protein OS=Rhodopirellula maiorica SM1 GN=RMSM_05347 PE=4 SV=1\tK02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]" }, { "name":"SOIL9_59920 Type II secretion system protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1433 PE=4 SV=1: T2SF\tK12510 tadB; tight adherence protein B" }, { "name":"SOIL9_59930 Type II secretion system F domain protein OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_2386 PE=4 SV=1: T2SF\tK12511 tadC; tight adherence protein C" }, { "name":"SOIL9_21440 response regulator with -like aaa-type and dna-binding domains : Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1278 PE=4 SV=1: Response_reg: Sigma54_activat: HTH_8\tK07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG" }, { "name":"SOIL9_63500 glutamine synthetase : Glutamine synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4895 PE=3 SV=1: GSIII_N: Gln-synt_C\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"SOIL9_75110 glutamine synthetase : Glutamine synthetase OS=Blastopirellula marina DSM 3645 GN=DSM3645_13233 PE=3 SV=1: Gln-synt_N: Gln-synt_C\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"SOIL9_09120 sensor protein : Histidine kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2375 PE=4 SV=1: HisKA: HATPase_c\tK07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]" }, { "name":"SOIL9_10510 histidine kinase : Histidine kinase OS=uncultured planctomycete GN=HGMM_F12C05C13 PE=4 SV=1: HisKA: HATPase_c\tK07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]" }, { "name":"SOIL9_40710 histidine kinase : Histidine kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1279 PE=4 SV=1: HisKA: HATPase_c\tK07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]" }, { "name":"SOIL9_50140 two sigma54 transcriptional fis family : Two component, sigma54 specific, transcriptional regulator, Fis family OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_3482 PE=4 SV=1: Response_reg: Sigma54_activat: HTH_8\tK07713 zraR; two-component system, NtrC family, response regulator HydG" }, { "name":"SOIL9_71850 two sigma54 fis family transcriptional regulator : Sigma54 specific transcriptional regulator, Fis family OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4161 PE=4 SV=1: FHA: GAF_2: Sigma54_activat: HTH_8\tK07713 zraR; two-component system, NtrC family, response regulator HydG" }, { "name":"SOIL9_83140 fis family transcriptional regulator : Sigma-54 factor interaction domain-containing protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0139 PE=4 SV=1: Sigma54_activat: HTH_8\tK07713 zraR; two-component system, NtrC family, response regulator HydG" }, { "name":"SOIL9_09130 two sigma54 transcriptional fis family : Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2376 PE=4 SV=1: Response_reg: Sigma54_activat: HTH_8\tK07714 atoC; two-component system, NtrC family, response regulator AtoC" }, { "name":"SOIL9_19650 response regulator with -like aaa-type and dna-binding domains : Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1278 PE=4 SV=1: Response_reg: Sigma54_activat: HTH_8\tK07714 atoC; two-component system, NtrC family, response regulator AtoC" }, { "name":"SOIL9_39120 response regulator with -like aaa-type and dna-binding domains : Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7189 PE=4 SV=1: Response_reg: Sigma54_activat: HTH_8\tK07714 atoC; two-component system, NtrC family, response regulator AtoC" }, { "name":"SOIL9_72060 response regulator with -like aaa-type and dna-binding domains : Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7189 PE=4 SV=1: Response_reg: Sigma54_activat: HTH_8\tK07714 atoC; two-component system, NtrC family, response regulator AtoC" }, { "name":"SOIL9_50660 acetyl-acetyltransferase : Acetyl-CoA acetyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6120 PE=3 SV=1: Thiolase_N: Thiolase_C\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SOIL9_61990 fis family transcriptional regulator : Sigma54 specific transcriptional regulator, Fis family OS=Anaeromyxobacter sp. (strain Fw109-5) GN=Anae109_1061 PE=4 SV=1: Sigma54_activat: HTH_8\tK10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD" }, { "name":"SOIL9_28250 rna sigma 54 : RNA polymerase sigma-54 factor OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1313 PE=4 SV=1: Sigma54_AID: Sigma54_CBD: Sigma54_DBD\tK03092 rpoN; RNA polymerase sigma-54 factor" }, { "name":"SOIL9_02660 multi-sensor signal transduction histidine kinase : Histidine kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5540 PE=4 SV=1: HAMP: PAS_4: HisKA: HATPase_c\tK11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]" }, { "name":"SOIL9_77180 multi-sensor signal transduction histidine kinase : Histidine kinase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2815 PE=4 SV=1: HAMP: HisKA: HATPase_c\tK11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]" }, { "name":"SOIL9_02670 chemotaxis protein : Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4685 PE=4 SV=1: Response_reg: Sigma54_activat: HTH_8\tK11384 algB; two-component system, NtrC family, response regulator AlgB" }, { "name":"SOIL9_77170 chemotaxis protein : Two component, sigma54 specific, transcriptional regulator, Fis family OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2814 PE=4 SV=1: Response_reg: Sigma54_activat: HTH_8\tK11384 algB; two-component system, NtrC family, response regulator AlgB" }, { "name":"SOIL9_09860 chemotaxis protein : Chemotaxis protein methyltransferase OS=Candidatus Methylomirabilis oxyfera GN=cheR PE=4 SV=1: CheR_N: CheR: CheD\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"SOIL9_19450 chemotaxis protein : MCP methyltransferase, CheR-type OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3069 PE=4 SV=1: CheR_N: CheR\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"SOIL9_24190 chemotaxis protein : Methylase of chemotaxis methyl-accepting protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0284 PE=4 SV=1: CheR_N: CheR\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"SOIL9_36670 chemotaxis protein : CheR Chemotaxis protein methyltransferase, MCP methyltransferase, Protein-glutamate O-methyltransferase_ OS=Arthrospira sp. PCC 8005 GN=cheR1 PE=4 SV=1: CheR_N: CheR\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"SOIL9_51560 protein-glutamate o-methyltransferase : Protein-glutamate O-methyltransferase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=Anae109_2370 PE=4 SV=1: CheR\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"SOIL9_48580 signal transduction histidine kinase with and activity : Protein-glutamate methylesterase OS=Anabaena variabilis (strain ATCC 29413 \/ PCC 7937) GN=Ava_0314 PE=4 SV=1: CheB_methylest: CheR_N: CheR: PAS_10\tK13924 cheBR; two-component system, chemotaxis family, CheB\/CheR fusion protein [EC:2.1.1.80 3.1.1.61]" }, { "name":"SOIL9_06130 chemotaxis protein : Methyl-accepting chemotaxis sensory transducer OS=Rhodothermus marinus (strain ATCC 43812 \/ DSM 4252 \/ R-10) GN=Rmar_2782 PE=4 SV=1: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_06150 chemotaxis partial : Chemotaxis protein OS=Burkholderia sp. MP-1 GN=BG58_15470 PE=4 SV=1: 4HB_MCP_1: HAMP: PAS_9: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_06160 chemotaxis protein : Methyl-accepting chemotaxis sensory transducer OS=Thiorhodospira sibirica ATCC 700588 GN=ThisiDRAFT_1409 PE=4 SV=1: 4HB_MCP_1: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_09180 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_09810 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_09820 chemotaxis protein : Chemotaxis protein OS=Listonella anguillarum M3 GN=N175_16910 PE=4 SV=1: DUF3365: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_09830 chemotaxis protein : Methyl-accepting chemotaxis protein OS=Desulfovibrio africanus PCS GN=PCS_01416 PE=4 SV=1: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_15130 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_19480 methyl-accepting chemotaxis sensory transducer with pas pac sensor : Methyl-accepting chemotaxis sensory transducer with Pas\/Pac sensor OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3072 PE=4 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_21450 chemotaxis protein : Histidine kinase, HAMP region:chemotaxis sensory transducer OS=Candidatus Methylomirabilis oxyfera GN=DAMO_1725 PE=4 SV=1: 4HB_MCP_1: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_32910 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_36680 methyl-accepting chemotaxis protein : Methyl-accepting chemotaxis sensory transducer OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3524 PE=4 SV=1: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_45440 chemotaxis protein : Methyl-accepting chemotaxis (MCP) signaling domain protein OS=Vibrio cholerae CP1047(20) GN=VCCP1047_2988 PE=4 SV=1: 4HB_MCP_1: HAMP: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_47160 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_57150 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_60830 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_70440 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_71690 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_74490 chemotaxis protein : Histidine kinase, HAMP region:chemotaxis sensory transducer OS=Candidatus Methylomirabilis oxyfera GN=DAMO_1725 PE=4 SV=1: 4HB_MCP_1: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_77260 chemotaxis partial : Putative methyl-accepting chemotaxis protein (MCP) with multiple PAS domains OS=Bradyrhizobium sp. ORS 375 GN=BRAO375_800034 PE=4 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_85740 chemotaxis protein : Histidine kinase, HAMP region:chemotaxis sensory transducer OS=Candidatus Methylomirabilis oxyfera GN=DAMO_1725 PE=4 SV=1: 4HB_MCP_1: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_09170 chemotaxis protein : Chemotaxis signal transduction protein CheW OS=Candidatus Nitrospira defluvii GN=cheW PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_09800 chemotaxis protein : Chemotaxis signal transduction protein CheW OS=Candidatus Nitrospira defluvii GN=cheW PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_14590 chemotaxis protein : Chemotaxis signal transduction protein CheW OS=Candidatus Nitrospira defluvii GN=cheW PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_19490 chemotaxis protein : CheW protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3073 PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_21460 chemotaxis protein : Chemotaxis signal transduction protein CheW OS=Candidatus Nitrospira defluvii GN=cheW PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_36690 chemotaxis protein : CheW protein OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3523 PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_47150 chemotaxis protein : Chemotaxis signal transduction protein CheW OS=Candidatus Nitrospira defluvii GN=cheW PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_51550 chemotaxis protein : Putative chemotaxis signal transduction protein CheW OS=Actinoplanes friuliensis DSM 7358 GN=AFR_25675 PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_51570 chemotaxis protein : Uncharacterized protein OS=Pseudogulbenkiania ferrooxidans EGD-HP2 GN=O166_02540 PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_71720 chemotaxis protein : Chemotaxis signal transduction protein CheW OS=Candidatus Nitrospira defluvii GN=cheW PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_74480 chemotaxis protein : Chemotaxis signal transduction protein CheW OS=Candidatus Nitrospira defluvii GN=cheW PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_05810 signal transduction histidine kinase : Histidine kinase OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3522 PE=4 SV=1: Hpt: H-kinase_dim\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_09790 chemotaxis protein : Histidine kinase OS=Desulfohalobium retbaense (strain DSM 5692) GN=Dret_0656 PE=4 SV=1: Hpt: Hpt: H-kinase_dim: HATPase_c: CheW\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_19500 chemotaxis protein : Histidine kinase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3074 PE=4 SV=1: Hpt: H-kinase_dim: HATPase_c: CheW: CheW\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_36700 chemotaxis protein : Histidine kinase OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3522 PE=4 SV=1: Hpt: H-kinase_dim: HATPase_c: CheW\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_51530 signal transduction histidine kinase : CheA signal transduction histidine kinase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=Anae109_2367 PE=4 SV=1: Hpt: HATPase_c: CheW: Response_reg\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_09780 fis family transcriptional regulator : Response regulator receiver protein OS=Gallionella capsiferriformans (strain ES-2) GN=Galf_1020 PE=4 SV=1: Response_reg\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SOIL9_09880 chemotaxis protein : Response regulator receiver protein OS=Arcobacter nitrofigilis (strain ATCC 33309 \/ DSM 7299 \/ LMG 7604 \/ NCTC 12251 \/ CI) GN=Arnit_0721 PE=4 SV=1: Response_reg\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SOIL9_19470 histidine kinase : Response regulator containing a CheY-like receiver domain and a GGDEF domain OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3686 PE=4 SV=1: Response_reg\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SOIL9_36650 response regulator receiver protein : Response regulator receiver protein OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3528 PE=4 SV=1: Response_reg\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SOIL9_09870 chemotaxis response regulator protein-glutamate methylesterase : Chemotaxis response regulator protein-glutamate methylesterase OS=Candidatus Methylomirabilis oxyfera GN=cheB PE=3 SV=1: Response_reg: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_19460 response regulator receiver modulated methylesterase : Chemotaxis response regulator protein-glutamate methylesterase OS=Candidatus Contendobacter odensis Run_B_J11 GN=cheB PE=3 SV=1: Response_reg: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_24180 chemotaxis protein : Uncharacterized protein OS=Asticcacaulis sp. AC466 GN=AEAC466_07295 PE=4 SV=1: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_36660 chemotaxis response regulator protein-glutamate methylesterase : Chemotaxis response regulator protein-glutamate methylesterase OS=Crinalium epipsammum PCC 9333 GN=cheB PE=3 SV=1: Response_reg: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_48600 chemotaxis protein : Chemotaxis protein CheB OS=Tolypothrix bouteillei VB521301 GN=DA73_11040 PE=4 SV=1: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_51520 chemotaxis protein : Chemotaxis response regulator protein-glutamate methylesterase OS=Herbaspirillum sp. CF444 GN=cheB PE=3 SV=1: Response_reg: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_06410 chemotaxis protein : Chemotaxis protein CheW OS=Ralstonia pickettii DTP0602 GN=N234_31910 PE=4 SV=1: CheR: TPR_16\tK13486 wspC; chemotaxis protein methyltransferase WspC" }, { "name":"SOIL9_06430 chemotaxis protein : Uncharacterized protein OS=Arenimonas composti TR7-09 = DSM 18010 GN=P873_14335 PE=4 SV=1: HAMP: MCPsignal\tK13487 wspA; methyl-accepting chemotaxis protein WspA" }, { "name":"SOIL9_06420 chemotaxis protein : CheW protein OS=Nostoc sp. PCC 7107 GN=Nos7107_1450 PE=4 SV=1: CheW\tK13488 wspB; chemotaxis-related protein WspB" }, { "name":"SOIL9_06400 protein : Chemotaxis signal transduction protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4832 PE=4 SV=1: CheW\tK13489 wspD; chemotaxis-related protein WspD" }, { "name":"SOIL9_06390 signal transduction histidine kinase : Response regulator receiver domain protein OS=bacterium UASB270 GN=U27_04003 PE=4 SV=1: Hpt: HATPase_c: CheW: Response_reg\tK13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE" }, { "name":"SOIL9_06380 chemotaxis protein : Chemotaxis response regulator protein-glutamate methylesterase OS=Cyanothece sp. (strain PCC 8802) GN=cheB PE=3 SV=1: Response_reg: CheB_methylest\tK13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61]" }, { "name":"SOIL9_18220 sensor histidine kinase : ATPase OS=Microvirga aerilata GN=JH26_25195 PE=4 SV=1: PAS_2: GAF: PHY: HisKA: HATPase_c\tK11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]" }, { "name":"SOIL9_12780 pas domain s-box : Uncharacterized protein OS=uncultured bacterium GN=ACD_75C00961G0003 PE=4 SV=1: PAS_9: PAS_4: PAS_8: PAS_9: HisKA: HATPase_c: Response_reg\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"SOIL9_13580 pas pac sensor hybrid histidine kinase : PAS\/PAC sensor hybrid histidine kinase OS=Haliangium ochraceum (strain DSM 14365 \/ JCM 11303 \/ SMP-2) GN=Hoch_2685 PE=4 SV=1: PAS_8: PAS_4: HisKA: HATPase_c: Response_reg\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"SOIL9_15640 multi-sensor hybrid histidine kinase : PAS\/PAC sensor hybrid histidine kinase OS=uncultured bacterium GN=ACD_75C00374G0005 PE=4 SV=1: PAS_4: PAS_3: PAS_8: PAS_3: HisKA: HATPase_c: Response_reg\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"SOIL9_18140 pas pac sensor hybrid histidine kinase : Histidine kinase OS=uncultured planctomycete GN=HGMM_F01A04C16 PE=4 SV=1: PAS_4: HisKA: HATPase_c: Response_reg\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"SOIL9_40410 pas pac sensor hybrid histidine kinase : Sensor histidine kinase response regulator, PAS and PAS domain-containing OS=Geobacter bemidjiensis (strain Bem \/ ATCC BAA-1014 \/ DSM 16622) GN=Gbem_3878 PE=4 SV=1: PAS_9: PAS_8: PAS_4: HisKA: HATPase_c: Response_reg\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"SOIL9_47350 multi-sensor hybrid histidine kinase : Multi-sensor hybrid histidine kinase OS=Spirochaeta smaragdinae (strain DSM 11293 \/ JCM 15392 \/ SEBR 4228) GN=Spirs_1827 PE=4 SV=1: Response_reg: PAS_4: HisKA: HATPase_c: Response_reg\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"SOIL9_80180 pas pac sensor hybrid histidine kinase : PAS\/PAC sensor hybrid histidine kinase OS=Caldithrix abyssi DSM 13497 GN=Calab_2608 PE=4 SV=1: PAS: PAS: PAS_3: HisKA: HATPase_c: Response_reg\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"SOIL9_25920 fis family transcriptional regulator : Marine sediment metagenome DNA, contig: S01H1_S18739 (Fragment) OS=marine sediment metagenome GN=S01H1_51886 PE=4 SV=1: Response_reg\tK13041 ttrR; two-component system, LuxR family, response regulator TtrR" }, { "name":"SOIL9_28340 histidine kinase : Signal transduction histidine kinase, nitrogen specific, NtrB OS=uncultured bacterium GN=ACD_75C00451G0002 PE=4 SV=1: PAS_9: HisKA: HATPase_c\tK14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]" }, { "name":"SOIL9_65610 membrane protein : Cytochrome-c oxidase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0396 PE=4 SV=1: COX1\tK00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]" }, { "name":"SOIL9_65620 cytochrome c oxidase mono-heme subunit : Cytochrome C oxidase mono-heme subunit\/FixO OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0397 PE=4 SV=1: FixO\tK00405 ccoO; cytochrome c oxidase cbb3-type subunit II" }, { "name":"SOIL9_07680 outer membrane efflux protein : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_09634 PE=4 SV=1: OEP\tK12340 tolC; outer membrane protein" }, { "name":"SOIL9_09710 polysaccharide export protein : Wza OS=Blastopirellula marina DSM 3645 GN=DSM3645_28367 PE=4 SV=1: Poly_export\tK01991 wza; polysaccharide biosynthesis\/export protein" }, { "name":"SOIL9_28910 Polysaccharide export protein OS=Rhodopirellula maiorica SM1 GN=RMSM_06388 PE=4 SV=1: SLBB\tK01991 wza; polysaccharide biosynthesis\/export protein" }, { "name":"SOIL9_83070 polysaccharide export protein wza : Polysaccharide export protein Wza OS=Haematobacter missouriensis GN=CG51_11265 PE=4 SV=1: Poly_export\tK01991 wza; polysaccharide biosynthesis\/export protein" }, { "name":"SOIL9_83210 polysaccharide export protein : Polysaccharide export protein OS=Rhodopirellula maiorica SM1 GN=RMSM_04496 PE=4 SV=1: Poly_export: Poly_export\tK01991 wza; polysaccharide biosynthesis\/export protein" }, { "name":"SOIL9_66740 unnamed protein product; BLAST_uniprot: no_hits\tK02398 flgM; negative regulator of flagellin synthesis FlgM" } ] }, { "name":"04010 MAPK signaling pathway" }, { "name":"04013 MAPK signaling pathway - fly" }, { "name":"04016 MAPK signaling pathway - plant" }, { "name":"04011 MAPK signaling pathway - yeast" }, { "name":"04012 ErbB signaling pathway" }, { "name":"04014 Ras signaling pathway" }, { "name":"04015 Rap1 signaling pathway" }, { "name":"04310 Wnt signaling pathway" }, { "name":"04330 Notch signaling pathway" }, { "name":"04340 Hedgehog signaling pathway" }, { "name":"04341 Hedgehog signaling pathway - fly" }, { "name":"04350 TGF-beta signaling pathway" }, { "name":"04390 Hippo signaling pathway" }, { "name":"04391 Hippo signaling pathway - fly" }, { "name":"04392 Hippo signaling pathway - multiple species" }, { "name":"04370 VEGF signaling pathway" }, { "name":"04371 Apelin signaling pathway" }, { "name":"04630 JAK-STAT signaling pathway" }, { "name":"04064 NF-kappa B signaling pathway" }, { "name":"04668 TNF signaling pathway" }, { "name":"04066 HIF-1 signaling pathway" }, { "name":"04068 FoxO signaling pathway" }, { "name":"04020 Calcium signaling pathway" }, { "name":"04070 Phosphatidylinositol signaling system" }, { "name":"04072 Phospholipase D signaling pathway" }, { "name":"04071 Sphingolipid signaling pathway" }, { "name":"04024 cAMP signaling pathway" }, { "name":"04022 cGMP-PKG signaling pathway" }, { "name":"04151 PI3K-Akt signaling pathway" }, { "name":"04152 AMPK signaling pathway" }, { "name":"04150 mTOR signaling pathway" }, { "name":"04075 Plant hormone signal transduction" } ] }, { "name":"09133 Signaling molecules and interaction", "children":[ { "name":"04080 Neuroactive ligand-receptor interaction" }, { "name":"04082 Neuroactive ligand signaling" }, { "name":"04081 Hormone signaling" }, { "name":"04060 Cytokine-cytokine receptor interaction" }, { "name":"04061 Viral protein interaction with cytokine and cytokine receptor" }, { "name":"04512 ECM-receptor interaction" }, { "name":"04514 Cell adhesion molecule (CAM) interaction" }, { "name":"04517 IgSF CAM signaling" }, { "name":"04518 Integrin signaling" }, { "name":"04519 Cadherin signaling" } ] } ] }, { "name":"09140 Cellular Processes", "children":[ { "name":"09141 Transport and catabolism", "children":[ { "name":"04144 Endocytosis" }, { "name":"04145 Phagocytosis" }, { "name":"04142 Lysosome biogenesis [PATH:gms04142]", "children":[ { "name":"SOIL9_65720 Sulphatase-modifying factor protein OS=Cyclobacterium marinum (strain ATCC 25205 \/ DSM 745) GN=Cycma_4680 PE=4 SV=1: FGE-sulfatase\tK13444 SUMF1; formylglycine-generating enzyme [EC:1.8.3.7]" }, { "name":"SOIL9_46700 exo-alpha-sialidase : Exo-alpha-sialidase OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_3506 PE=4 SV=1: BNR_2\tK01186 NEU1; sialidase-1 [EC:3.2.1.18]" }, { "name":"SOIL9_63650 glycosylasparaginase : N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase OS=Elizabethkingia miricola PE=1 SV=1: Asparaginase_2\tK01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]" } ] }, { "name":"04146 Peroxisome [PATH:gms04146]", "children":[ { "name":"SOIL9_33620 mevalonate kinase : Marine sediment metagenome DNA, contig: S01H1_S08262 (Fragment) OS=marine sediment metagenome GN=S01H1_36735 PE=4 SV=1: GHMP_kinases_N: GHMP_kinases_C\tK00869 MVK; mevalonate kinase [EC:2.7.1.36]" }, { "name":"SOIL9_42310 alanine--glyoxylate aminotransferase : Aminotransferase, class V OS=Planctomyces maris DSM 8797 GN=PM8797T_18841 PE=3 SV=1: Aminotran_5\tK00830 AGXT; alanine-glyoxylate transaminase \/ serine-glyoxylate transaminase \/ serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]" }, { "name":"SOIL9_79450 isocitrate dehydrogenase : Isocitrate dehydrogenase [NADP] OS=Catenulispora acidiphila (strain DSM 44928 \/ NRRL B-24433 \/ NBRC 102108 \/ JCM 14897) GN=Caci_7976 PE=3 SV=1: Iso_dh\tK00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]" }, { "name":"SOIL9_10180 catalase : Catalase-related peroxidase OS=Acidobacterium capsulatum (strain ATCC 51196 \/ DSM 11244 \/ JCM 7670) GN=ACP_1705 PE=3 SV=1: Catalase\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"SOIL9_10580 catalase : Catalase KatB OS=Corallococcus coralloides (strain ATCC 25202 \/ DSM 2259 \/ NBRC 100086 \/ M2) GN=katB PE=4 SV=1: Catalase: Catalase-rel\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"SOIL9_48460 catalase : Catalase OS=Rhodomicrobium vannielii (strain ATCC 17100 \/ ATH 3.1.1 \/ DSM 162 \/ LMG 4299) GN=Rvan_0122 PE=3 SV=1: Catalase: Catalase-rel\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"SOIL9_81230 catalase : Catalase OS=Rhodomicrobium vannielii (strain ATCC 17100 \/ ATH 3.1.1 \/ DSM 162 \/ LMG 4299) GN=Rvan_0122 PE=3 SV=1: Catalase: Catalase-rel\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"SOIL9_56970 superoxide dismutase : Superoxide dismutase OS=Roseiflexus sp. (strain RS-1) GN=RoseRS_3237 PE=3 SV=1: Sod_Fe_N: Sod_Fe_C\tK04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]" }, { "name":"SOIL9_62630 superoxide dismutase : Superoxide dismutase OS=Xanthomonas translucens pv. graminis ART-Xtg29 GN=sod5 PE=3 SV=1: Sod_Fe_N: Sod_Fe_C\tK04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]" } ] }, { "name":"04149 Peroxisome - yeast" }, { "name":"04140 Autophagy - animal" }, { "name":"04138 Autophagy - yeast" }, { "name":"04136 Autophagy - other" }, { "name":"04137 Mitophagy - animal" }, { "name":"04139 Mitophagy - yeast" }, { "name":"04148 Efferocytosis" } ] }, { "name":"09143 Cell growth and death", "children":[ { "name":"04110 Cell cycle" }, { "name":"04111 Cell cycle - yeast" }, { "name":"04112 Cell cycle - Caulobacter" }, { "name":"04113 Meiosis - yeast" }, { "name":"04114 Oocyte meiosis" }, { "name":"04210 Apoptosis" }, { "name":"04214 Apoptosis - fly" }, { "name":"04215 Apoptosis - multiple species" }, { "name":"04216 Ferroptosis" }, { "name":"04217 Necroptosis" }, { "name":"04115 p53 signaling pathway" }, { "name":"04218 Cellular senescence" }, { "name":"04156 Integrated stress response (ISR) signaling pathway [PATH:gms04156]", "children":[ { "name":"SOIL9_59030 heat shock protein 90 : Chaperone protein HtpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1: HATPase_c_3: HSP90\tK04079 HSP90A; molecular chaperone HtpG" }, { "name":"SOIL9__T20 score=81.52; score=81.52\tK14230 tRNA-Met; tRNA Met" }, { "name":"SOIL9__T270 score=41.76; score=41.76\tK14230 tRNA-Met; tRNA Met" }, { "name":"SOIL9__T520 score=75.88; score=75.88\tK14230 tRNA-Met; tRNA Met" }, { "name":"SOIL9__T560 score=44.67; score=44.67\tK14230 tRNA-Met; tRNA Met" }, { "name":"SOIL9__T640 score=44.67; score=44.67\tK14230 tRNA-Met; tRNA Met" }, { "name":"SOIL9__T720 score=41.99; score=41.99\tK14230 tRNA-Met; tRNA Met" }, { "name":"SOIL9_25310 molecular chaperone : Chaperone protein HscA OS=Terriglobus roseus (strain DSM 18391 \/ NRRL B-41598 \/ KBS 63) GN=Terro_4169 PE=3 SV=1: HSP70: Fe-S_assembly\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SOIL9_54850 Heat shock protein 70 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3585 PE=3 SV=1: HSP70: HSP70\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SOIL9_59680 chaperone protein : Chaperone protein DnaK OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=dnaK PE=2 SV=1: HSP70\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SOIL9_50210 chaperonin : 60 kDa chaperonin OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=groL PE=3 SV=1: Cpn60_TCP1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SOIL9_50230 chaperonin : 60 kDa chaperonin OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=groL PE=3 SV=1: Cpn60_TCP1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SOIL9_50690 chaperonin : 60 kDa chaperonin OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=groL PE=3 SV=1: Cpn60_TCP1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" } ] } ] }, { "name":"09144 Cellular community - eukaryotes", "children":[ { "name":"04510 Focal adhesion" }, { "name":"04520 Adherens junction" }, { "name":"04530 Tight junction" }, { "name":"04540 Gap junction" }, { "name":"04550 Signaling pathways regulating pluripotency of stem cells" } ] }, { "name":"09145 Cellular community - prokaryotes", "children":[ { "name":"02024 Quorum sensing [PATH:gms02024]", "children":[ { "name":"SOIL9_59570 anthranilate synthase component i : Anthranilate synthase component I OS=Planctomyces maris DSM 8797 GN=PM8797T_19864 PE=4 SV=1: Anth_synt_I_N: Chorismate_bind\tK01657 trpE; anthranilate synthase component I [EC:4.1.3.27]" }, { "name":"SOIL9_27420 glycosyl transferase : Glycosyl transferase family 28 OS=Methylobacterium extorquens (strain CM4 \/ NCIMB 13688) GN=Mchl_5544 PE=4 SV=1: Glyco_transf_28: UDPGT\tK18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-]" }, { "name":"SOIL9_45420 phospho-2-dehydro-3-deoxyheptonate aldolase : Phospho-2-dehydro-3-deoxyheptonate aldolase OS=Aquabacterium sp. NJ1 GN=JY96_12765 PE=4 SV=1: DAHP_synth_1\tK01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]" }, { "name":"SOIL9_67240 abc transporter substrate-binding protein : Spermidine\/putrescine ABC transporter substrate binding protein OS=Rhizobium lupini HPC(L) GN=C241_09881 PE=4 SV=1: SBP_bac_8\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"SOIL9_67260 polyamine abc transporter permease : ABC transporter permease OS=Pseudomonas poae RE*1-1-14 GN=H045_18210 PE=3 SV=1: BPD_transp_1\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"SOIL9_67250 polyamine abc transporter permease : Polyamine ABC transporter permease OS=Skermanella stibiiresistens SB22 GN=N825_14000 PE=3 SV=1: BPD_transp_1\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"SOIL9_66280 spermidine putrescine abc transporter atpase : Putative component of ABC transporter OS=Rhizobium freirei PRF 81 GN=RHSP_71811 PE=3 SV=1: ABC_tran: TOBE_2\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"SOIL9_34300 extracellular ligand-binding receptor : Uncharacterized protein OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 \/ DSM 11347 \/ YP87) GN=THEYE_A0613 PE=4 SV=1: Peripla_BP_6\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SOIL9_56310 Extracellular ligand-binding receptor OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4547 PE=4 SV=1: Peripla_BP_6\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SOIL9_56320 Extracellular ligand-binding receptor OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4547 PE=4 SV=1: Peripla_BP_6\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SOIL9_56330 abc transporter permease : Inner-membrane translocator OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4548 PE=4 SV=1: BPD_transp_2\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"SOIL9_56340 inner-membrane translocator : Inner-membrane translocator OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4549 PE=4 SV=1: BPD_transp_2\tK01998 livM; branched-chain amino acid transport system permease protein" }, { "name":"SOIL9_56350 branched-chain amino acid abc transporter atp-binding protein : ABC transporter related protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4550 PE=4 SV=1: ABC_tran: ABC_tran: BCA_ABC_TP_C\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"SOIL9_56360 amino acid abc transporter atpase : ABC transporter related protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4551 PE=3 SV=1: ABC_tran\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"SOIL9_85160 riboflavin biosynthesis protein : Riboflavin biosynthesis protein RibD OS=Planctomyces maris DSM 8797 GN=PM8797T_10129 PE=3 SV=1: dCMP_cyt_deam_1: RibD_C\tK11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase \/ 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]" }, { "name":"SOIL9_73250 Uncharacterized protein OS=uncultured bacterium PE=4 SV=1: DUF606\tK09936 TC.BAT2; bacterial\/archaeal transporter family-2 protein" }, { "name":"SOIL9_74150 membrane protein : Outer membrane protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6898 PE=4 SV=1: OEP: OEP\tK18139 oprM; outer membrane protein, multidrug efflux system" }, { "name":"SOIL9_34190 Extracellular solute-binding protein family 5 OS=Thermoanaerobacter italicus (strain DSM 9252 \/ Ab9) GN=Thit_0815 PE=4 SV=1: SBP_bac_5\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"SOIL9_39470 tagatose-bisphosphate aldolase : Tagatose-1,6-bisphosphate aldolase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0331 PE=4 SV=1: DeoC\tK01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]" }, { "name":"SOIL9_46890 60 kda inner membrane insertion protein : Membrane protein insertase YidC OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=yidC PE=3 SV=1: YidC_periplas: 60KD_IMP\tK03217 yidC; YidC\/Oxa1 family membrane protein insertase" }, { "name":"SOIL9_75020 peptidase s8 : Peptidase S8 and S53 subtilisin kexin sedolisin OS=Shewanella woodyi (strain ATCC 51908 \/ MS32) GN=Swoo_0647 PE=3 SV=1: Peptidase_S8: P_proprotein\tK14645 K14645; serine protease [EC:3.4.21.-]" }, { "name":"SOIL9_50320 protein-export membrane protein secd : Protein-export membrane protein SecD OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1349 PE=3 SV=1: SecD_SecF: SecD_SecF\tK12257 secDF; SecD\/SecF fusion protein" }, { "name":"SOIL9_84220 unnamed protein product; BLAST_uniprot: no_hits\tK03073 secE; preprotein translocase subunit SecE" }, { "name":"SOIL9_59730 preprotein translocase subunit : : SecG\tK03075 secG; preprotein translocase subunit SecG" }, { "name":"SOIL9_84770 preprotein translocase subunit : Protein translocase subunit SecY OS=Planctomyces maris DSM 8797 GN=secY PE=3 SV=1: SecY\tK03076 secY; preprotein translocase subunit SecY" }, { "name":"SOIL9_50330 Preprotein translocase subunit YajC OS=Hyphomonas johnsonii MHS-2 GN=HJO_05365 PE=4 SV=1: YajC\tK03210 yajC; preprotein translocase subunit YajC" }, { "name":"SOIL9_72400 preprotein translocase subunit : Protein translocase subunit SecA OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=secA PE=3 SV=1: SecA_DEAD: SecA_PP_bind: SecA_SW: SecA_SW: SEC-C\tK03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]" }, { "name":"SOIL9_76520 preprotein translocase subunit : Protein translocase subunit SecA OS=uncultured planctomycete GN=secA PE=3 SV=1: SecA_DEAD: SecA_PP_bind\tK03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]" }, { "name":"SOIL9_22370 cell division protein : Signal recognition particle receptor FtsY OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ftsY PE=3 SV=1: SRP54_N: SRP54\tK03110 ftsY; fused signal recognition particle receptor" }, { "name":"SOIL9_40150 signal recognition particle protein : Signal recognition particle protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=ffh PE=3 SV=1: SRP54_N: SRP54: SRP_SPB\tK03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]" } ] }, { "name":"05111 Biofilm formation - Vibrio cholerae" }, { "name":"02025 Biofilm formation - Pseudomonas aeruginosa" }, { "name":"02026 Biofilm formation - Escherichia coli" } ] }, { "name":"09142 Cell motility", "children":[ { "name":"02030 Bacterial chemotaxis [PATH:gms02030]", "children":[ { "name":"SOIL9_06130 chemotaxis protein : Methyl-accepting chemotaxis sensory transducer OS=Rhodothermus marinus (strain ATCC 43812 \/ DSM 4252 \/ R-10) GN=Rmar_2782 PE=4 SV=1: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_06150 chemotaxis partial : Chemotaxis protein OS=Burkholderia sp. MP-1 GN=BG58_15470 PE=4 SV=1: 4HB_MCP_1: HAMP: PAS_9: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_06160 chemotaxis protein : Methyl-accepting chemotaxis sensory transducer OS=Thiorhodospira sibirica ATCC 700588 GN=ThisiDRAFT_1409 PE=4 SV=1: 4HB_MCP_1: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_09180 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_09810 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_09820 chemotaxis protein : Chemotaxis protein OS=Listonella anguillarum M3 GN=N175_16910 PE=4 SV=1: DUF3365: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_09830 chemotaxis protein : Methyl-accepting chemotaxis protein OS=Desulfovibrio africanus PCS GN=PCS_01416 PE=4 SV=1: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_15130 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_19480 methyl-accepting chemotaxis sensory transducer with pas pac sensor : Methyl-accepting chemotaxis sensory transducer with Pas\/Pac sensor OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3072 PE=4 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_21450 chemotaxis protein : Histidine kinase, HAMP region:chemotaxis sensory transducer OS=Candidatus Methylomirabilis oxyfera GN=DAMO_1725 PE=4 SV=1: 4HB_MCP_1: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_32910 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_36680 methyl-accepting chemotaxis protein : Methyl-accepting chemotaxis sensory transducer OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3524 PE=4 SV=1: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_45440 chemotaxis protein : Methyl-accepting chemotaxis (MCP) signaling domain protein OS=Vibrio cholerae CP1047(20) GN=VCCP1047_2988 PE=4 SV=1: 4HB_MCP_1: HAMP: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_47160 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_57150 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_60830 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_70440 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_71690 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_74490 chemotaxis protein : Histidine kinase, HAMP region:chemotaxis sensory transducer OS=Candidatus Methylomirabilis oxyfera GN=DAMO_1725 PE=4 SV=1: 4HB_MCP_1: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_77260 chemotaxis partial : Putative methyl-accepting chemotaxis protein (MCP) with multiple PAS domains OS=Bradyrhizobium sp. ORS 375 GN=BRAO375_800034 PE=4 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_85740 chemotaxis protein : Histidine kinase, HAMP region:chemotaxis sensory transducer OS=Candidatus Methylomirabilis oxyfera GN=DAMO_1725 PE=4 SV=1: 4HB_MCP_1: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_18680 Periplasmic binding protein domain protein OS=Gemmatimonadetes bacterium KBS708 GN=J421_5609 PE=4 SV=1: Peripla_BP_4\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"SOIL9_47440 Monosaccharide ABC transporter substrate-binding protein, CUT2 family OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_3304 PE=4 SV=1: Peripla_BP_4\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"SOIL9_05810 signal transduction histidine kinase : Histidine kinase OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3522 PE=4 SV=1: Hpt: H-kinase_dim\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_09790 chemotaxis protein : Histidine kinase OS=Desulfohalobium retbaense (strain DSM 5692) GN=Dret_0656 PE=4 SV=1: Hpt: Hpt: H-kinase_dim: HATPase_c: CheW\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_19500 chemotaxis protein : Histidine kinase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3074 PE=4 SV=1: Hpt: H-kinase_dim: HATPase_c: CheW: CheW\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_36700 chemotaxis protein : Histidine kinase OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3522 PE=4 SV=1: Hpt: H-kinase_dim: HATPase_c: CheW\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_51530 signal transduction histidine kinase : CheA signal transduction histidine kinase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=Anae109_2367 PE=4 SV=1: Hpt: HATPase_c: CheW: Response_reg\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_09170 chemotaxis protein : Chemotaxis signal transduction protein CheW OS=Candidatus Nitrospira defluvii GN=cheW PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_09800 chemotaxis protein : Chemotaxis signal transduction protein CheW OS=Candidatus Nitrospira defluvii GN=cheW PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_14590 chemotaxis protein : Chemotaxis signal transduction protein CheW OS=Candidatus Nitrospira defluvii GN=cheW PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_19490 chemotaxis protein : CheW protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3073 PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_21460 chemotaxis protein : Chemotaxis signal transduction protein CheW OS=Candidatus Nitrospira defluvii GN=cheW PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_36690 chemotaxis protein : CheW protein OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3523 PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_47150 chemotaxis protein : Chemotaxis signal transduction protein CheW OS=Candidatus Nitrospira defluvii GN=cheW PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_51550 chemotaxis protein : Putative chemotaxis signal transduction protein CheW OS=Actinoplanes friuliensis DSM 7358 GN=AFR_25675 PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_51570 chemotaxis protein : Uncharacterized protein OS=Pseudogulbenkiania ferrooxidans EGD-HP2 GN=O166_02540 PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_71720 chemotaxis protein : Chemotaxis signal transduction protein CheW OS=Candidatus Nitrospira defluvii GN=cheW PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_74480 chemotaxis protein : Chemotaxis signal transduction protein CheW OS=Candidatus Nitrospira defluvii GN=cheW PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_09780 fis family transcriptional regulator : Response regulator receiver protein OS=Gallionella capsiferriformans (strain ES-2) GN=Galf_1020 PE=4 SV=1: Response_reg\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SOIL9_09880 chemotaxis protein : Response regulator receiver protein OS=Arcobacter nitrofigilis (strain ATCC 33309 \/ DSM 7299 \/ LMG 7604 \/ NCTC 12251 \/ CI) GN=Arnit_0721 PE=4 SV=1: Response_reg\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SOIL9_19470 histidine kinase : Response regulator containing a CheY-like receiver domain and a GGDEF domain OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3686 PE=4 SV=1: Response_reg\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SOIL9_36650 response regulator receiver protein : Response regulator receiver protein OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3528 PE=4 SV=1: Response_reg\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SOIL9_05820 CheC, inhibitor of MCP methylation OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3530 PE=4 SV=1\tK03410 cheC; chemotaxis protein CheC" }, { "name":"SOIL9_36640 inhibitor of mcp methylation : CheC, inhibitor of MCP methylation OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3530 PE=4 SV=1: CheC\tK03410 cheC; chemotaxis protein CheC" }, { "name":"SOIL9_09890 CheC domain protein OS=Hippea maritima (strain ATCC 700847 \/ DSM 10411 \/ MH2) GN=Hipma_0355 PE=4 SV=1: CheX\tK03409 cheX; chemotaxis protein CheX" }, { "name":"SOIL9_19440 : CheX\tK03409 cheX; chemotaxis protein CheX" }, { "name":"SOIL9_09870 chemotaxis response regulator protein-glutamate methylesterase : Chemotaxis response regulator protein-glutamate methylesterase OS=Candidatus Methylomirabilis oxyfera GN=cheB PE=3 SV=1: Response_reg: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_19460 response regulator receiver modulated methylesterase : Chemotaxis response regulator protein-glutamate methylesterase OS=Candidatus Contendobacter odensis Run_B_J11 GN=cheB PE=3 SV=1: Response_reg: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_24180 chemotaxis protein : Uncharacterized protein OS=Asticcacaulis sp. AC466 GN=AEAC466_07295 PE=4 SV=1: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_36660 chemotaxis response regulator protein-glutamate methylesterase : Chemotaxis response regulator protein-glutamate methylesterase OS=Crinalium epipsammum PCC 9333 GN=cheB PE=3 SV=1: Response_reg: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_48600 chemotaxis protein : Chemotaxis protein CheB OS=Tolypothrix bouteillei VB521301 GN=DA73_11040 PE=4 SV=1: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_51520 chemotaxis protein : Chemotaxis response regulator protein-glutamate methylesterase OS=Herbaspirillum sp. CF444 GN=cheB PE=3 SV=1: Response_reg: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_48580 signal transduction histidine kinase with and activity : Protein-glutamate methylesterase OS=Anabaena variabilis (strain ATCC 29413 \/ PCC 7937) GN=Ava_0314 PE=4 SV=1: CheB_methylest: CheR_N: CheR: PAS_10\tK13924 cheBR; two-component system, chemotaxis family, CheB\/CheR fusion protein [EC:2.1.1.80 3.1.1.61]" }, { "name":"SOIL9_09860 chemotaxis protein : Chemotaxis protein methyltransferase OS=Candidatus Methylomirabilis oxyfera GN=cheR PE=4 SV=1: CheR_N: CheR: CheD\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"SOIL9_19450 chemotaxis protein : MCP methyltransferase, CheR-type OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3069 PE=4 SV=1: CheR_N: CheR\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"SOIL9_24190 chemotaxis protein : Methylase of chemotaxis methyl-accepting protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0284 PE=4 SV=1: CheR_N: CheR\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"SOIL9_36670 chemotaxis protein : CheR Chemotaxis protein methyltransferase, MCP methyltransferase, Protein-glutamate O-methyltransferase_ OS=Arthrospira sp. PCC 8005 GN=cheR1 PE=4 SV=1: CheR_N: CheR\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"SOIL9_51560 protein-glutamate o-methyltransferase : Protein-glutamate O-methyltransferase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=Anae109_2370 PE=4 SV=1: CheR\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"SOIL9_13500 flagellar motor switch protein : Flagellar motor switch protein FliG OS=Rhodothermus marinus (strain ATCC 43812 \/ DSM 4252 \/ R-10) GN=Rmar_0789 PE=4 SV=1: FliG_M: FliG_C\tK02410 fliG; flagellar motor switch protein FliG" }, { "name":"SOIL9_13270 Flagellar motor switch protein FliM OS=Moorella thermoacetica (strain ATCC 39073) GN=Moth_0804 PE=4 SV=1: SpoA\tK02416 fliM; flagellar motor switch protein FliM" }, { "name":"SOIL9_13280 flagellar motor switch protein : Flagellar motor switch protein FliY OS=Lactobacillus mali KCTC 3596 = DSM 20444 GN=fliY PE=4 SV=1: SpoA\tK02417 fliN; flagellar motor switch protein FliN" }, { "name":"SOIL9_13360 flagellar motor protein : MotA\/TolQ\/ExbB proton channel OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2583 PE=4 SV=1: MotA_ExbB\tK02556 motA; chemotaxis protein MotA" }, { "name":"SOIL9_13350 flagellar motor protein : Motility protein B, N-terminal domain protein OS=Gemmatimonadetes bacterium KBS708 GN=J421_0225 PE=4 SV=1: MotB_plug\tK02557 motB; chemotaxis protein MotB" } ] }, { "name":"02040 Flagellar assembly [PATH:gms02040]", "children":[ { "name":"SOIL9_13520 flagellar hook-basal body complex protein : Flagellar hook-basal body complex protein FliE OS=Desulfotomaculum hydrothermale Lam5 = DSM 18033 GN=fliE PE=3 SV=1: FliE\tK02408 fliE; flagellar hook-basal body complex protein FliE" }, { "name":"SOIL9_13510 flagellar m-ring protein : Flagellar M-ring protein OS=Candidatus Methylomirabilis oxyfera GN=fliF PE=3 SV=1: YscJ_FliF: YscJ_FliF_C\tK02409 fliF; flagellar M-ring protein FliF" }, { "name":"SOIL9_13500 flagellar motor switch protein : Flagellar motor switch protein FliG OS=Rhodothermus marinus (strain ATCC 43812 \/ DSM 4252 \/ R-10) GN=Rmar_0789 PE=4 SV=1: FliG_M: FliG_C\tK02410 fliG; flagellar motor switch protein FliG" }, { "name":"SOIL9_13490 Flagellar assembly protein FliH\/Type III secretion system HrpE OS=Terriglobus saanensis (strain ATCC BAA-1853 \/ DSM 23119 \/ SP1PR4) GN=AciPR4_1814 PE=4 SV=1: FliH\tK02411 fliH; flagellar assembly protein FliH" }, { "name":"SOIL9_13480 atp synthase : Flagellum-specific ATP synthase FliI OS=Clostridium acidurici (strain ATCC 7906 \/ DSM 604 \/ KCTC 5404 \/ 9a) GN=fliI PE=4 SV=1: ATP-synt_ab_N: ATP-synt_ab\tK02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]" }, { "name":"SOIL9_13470 flagellar export protein : : FliJ\tK02413 fliJ; flagellar protein FliJ" }, { "name":"SOIL9_13260 flagellar basal body-associated protein : Flagellar basal body-associated protein FliL OS=Labrenzia alexandrii DFL-11 GN=fliL PE=4 SV=1: FliL\tK02415 fliL; flagellar protein FliL" }, { "name":"SOIL9_13270 Flagellar motor switch protein FliM OS=Moorella thermoacetica (strain ATCC 39073) GN=Moth_0804 PE=4 SV=1: SpoA\tK02416 fliM; flagellar motor switch protein FliM" }, { "name":"SOIL9_13280 flagellar motor switch protein : Flagellar motor switch protein FliY OS=Lactobacillus mali KCTC 3596 = DSM 20444 GN=fliY PE=4 SV=1: SpoA\tK02417 fliN; flagellar motor switch protein FliN" }, { "name":"SOIL9_13290 : FliO\tK02418 fliO; flagellar protein FliO\/FliZ" }, { "name":"SOIL9_13450 flagellar biosynthesis protein :\tK02418 fliO; flagellar protein FliO\/FliZ" }, { "name":"SOIL9_13430 flagellar biosynthesis protein : Flagellar biosynthetic protein FliP OS=uncultured planctomycete GN=HGMM_F11F07C18 PE=3 SV=1: FliP\tK02419 fliP; flagellar biosynthesis protein FliP" }, { "name":"SOIL9_13420 flagellar biosynthetic protein : Flagellar biosynthesis protein FliQ OS=Clostridium ljungdahlii (strain ATCC 55383 \/ DSM 13528 \/ PETC) GN=fliQ PE=4 SV=1: Bac_export_3\tK02420 fliQ; flagellar biosynthesis protein FliQ" }, { "name":"SOIL9_13410 flagellar biosynthesis protein : Flagellar biosynthetic protein fliR OS=Clostridium sp. CAG:253 GN=BN565_01317 PE=3 SV=1: Bac_export_1\tK02421 fliR; flagellar biosynthesis protein FliR" }, { "name":"SOIL9_13390 flagellar biosynthesis protein : Flagellar biosynthesis protein FlhA OS=uncultured planctomycete GN=HGMM_F11F07C14 PE=4 SV=1: FHIPEP\tK02400 flhA; flagellar biosynthesis protein FlhA" }, { "name":"SOIL9_13400 flagellar biosynthesis protein : Flagellar biosynthetic protein FlhB OS=Deferribacter desulfuricans (strain DSM 14783 \/ JCM 11476 \/ NBRC 101012 \/ SSM1) GN=flhB PE=4 SV=1: Bac_export_2\tK02401 flhB; flagellar biosynthesis protein FlhB" }, { "name":"SOIL9_13160 : SAF_2\tK02386 flgA; flagellar basal body P-ring formation protein FlgA" }, { "name":"SOIL9_13540 flagellar basal-body rod protein : Flagellar basal body rod protein FlgB OS=Candidatus Kuenenia stuttgartiensis GN=flgB PE=3 SV=1: Flg_bb_rod\tK02387 flgB; flagellar basal-body rod protein FlgB" }, { "name":"SOIL9_13530 flagellar basal body rod protein : Flagellar basal-body rod protein FlgC OS=Marinitoga piezophila (strain DSM 14283 \/ JCM 11233 \/ KA3) GN=Marpi_1604 PE=4 SV=1: Flg_bb_rod: Flg_bbr_C\tK02388 flgC; flagellar basal-body rod protein FlgC" }, { "name":"SOIL9_13310 Flagellar hook capping protein OS=Bacillus sp. 1NLA3E GN=B1NLA3E_18280 PE=4 SV=1: FlgD\tK02389 flgD; flagellar basal-body rod modification protein FlgD" }, { "name":"SOIL9_13300 flagellar hook protein : Flagellar hook-basal body protein OS=Cellulomonas fimi (strain ATCC 484 \/ DSM 20113 \/ JCM 1341 \/ NBRC 15513 \/ NCIMB 8980 \/ NCTC 7547) GN=Celf_0679 PE=4 SV=1: Flg_bb_rod: FlaE: Flg_bbr_C\tK02390 flgE; flagellar hook protein FlgE" }, { "name":"SOIL9_13140 Flagellar basal body rod protein FlgG OS=uncultured planctomycete GN=HGMM_F33C03C05 PE=4 SV=1: Flg_bbr_C\tK02391 flgF; flagellar basal-body rod protein FlgF" }, { "name":"SOIL9_13150 flagellar basal body rod protein : Flagellar basal body rod protein FlgG OS=uncultured planctomycete GN=HGMM_F33C03C04 PE=4 SV=1: Flg_bb_rod: Flg_bbr_C\tK02392 flgG; flagellar basal-body rod protein FlgG" }, { "name":"SOIL9_45510 Flagellar basal body rod protein FlgG OS=uncultured planctomycete GN=HGMM_F33C03C04 PE=4 SV=1\tK02392 flgG; flagellar basal-body rod protein FlgG" }, { "name":"SOIL9_47220 flagellar basal body rod protein : Flagellar hook basal-body protein FlgG OS=Aquifex aeolicus (strain VF5) GN=flgG2 PE=4 SV=1: Flg_bb_rod: Flg_bbr_C\tK02392 flgG; flagellar basal-body rod protein FlgG" }, { "name":"SOIL9_58010 Flagellar basal-body rod protein FlgG OS=Novosphingobium pentaromativorans US6-1 GN=flgG PE=4 SV=1\tK02392 flgG; flagellar basal-body rod protein FlgG" }, { "name":"SOIL9_13170 flagellar l-ring protein : Flagellar L-ring protein FlgH OS=uncultured planctomycete GN=HGMM_F33C03C02 PE=4 SV=1: FlgH\tK02393 flgH; flagellar L-ring protein FlgH" }, { "name":"SOIL9_13180 flagellar p-ring protein : Flagellar P-ring protein OS=Desulfohalobium retbaense (strain DSM 5692) GN=flgI PE=3 SV=1: FlgI\tK02394 flgI; flagellar P-ring protein FlgI" }, { "name":"SOIL9_13190 FlgJ family peptidoglycan hydrolase OS=Leclercia adecarboxylata ATCC 23216 = NBRC 102595 GN=flgJ PE=4 SV=1: Rod-binding\tK02395 flgJ; peptidoglycan hydrolase FlgJ" }, { "name":"SOIL9_13210 flagellar hook-associated protein : Uncharacterized protein OS=uncultured bacterium GN=ACD_79C00963G0004 PE=4 SV=1: Flg_bb_rod: Flagellin_C\tK02396 flgK; flagellar hook-associated protein 1" }, { "name":"SOIL9_13220 flagellar hook-associated protein : Similar to flagellar hook-associated protein FlgL OS=Candidatus Kuenenia stuttgartiensis GN=flgL PE=4 SV=1: Flagellin_N\tK02397 flgL; flagellar hook-associated protein 3 FlgL" }, { "name":"SOIL9_13110 protein containing flagellin : Flagellar protein OS=Geobacillus sp. A8 GN=GA8_04200 PE=4 SV=1: Flagellin_N: Flagellin_C\tK02406 fliC; flagellin" }, { "name":"SOIL9_13120 flagellar hook protein : Flagellar hook-associated 2 domain protein OS=Methylovorus glucosetrophus (strain SIP3-4) GN=Msip34_0750 PE=4 SV=1: FliD_N: FliD_C\tK02407 fliD; flagellar hook-associated protein 2" }, { "name":"SOIL9_13130 flagellar protein : Flagellar protein FliS OS=Natranaerobius thermophilus (strain ATCC BAA-1301 \/ DSM 18059 \/ JW\/NM-WN-LF) GN=Nther_2228 PE=4 SV=1: FliS\tK02422 fliS; flagellar secretion chaperone FliS" }, { "name":"SOIL9_13360 flagellar motor protein : MotA\/TolQ\/ExbB proton channel OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2583 PE=4 SV=1: MotA_ExbB\tK02556 motA; chemotaxis protein MotA" }, { "name":"SOIL9_13350 flagellar motor protein : Motility protein B, N-terminal domain protein OS=Gemmatimonadetes bacterium KBS708 GN=J421_0225 PE=4 SV=1: MotB_plug\tK02557 motB; chemotaxis protein MotB" }, { "name":"SOIL9_66740 unnamed protein product; BLAST_uniprot: no_hits\tK02398 flgM; negative regulator of flagellin synthesis FlgM" }, { "name":"SOIL9_03950 rna polymerase sigma70 : RNA polymerase sigma factor SigA OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=sigA PE=3 SV=1: Sigma70_r1_1: Sigma70_r1_2: Sigma70_r2: Sigma70_r3: Sigma70_r4\tK03086 rpoD; RNA polymerase primary sigma factor" }, { "name":"SOIL9_42540 sigma-70 factor : RNA polymerase, sigma 32 subunit, RpoH OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0433 PE=4 SV=1: Sigma70_r2: Sigma70_r4\tK03086 rpoD; RNA polymerase primary sigma factor" }, { "name":"SOIL9_45590 rna polymerase sigma factor : RNA polymerase sigma factor OS=uncultured planctomycete GN=HGMM_F09D09C22 PE=3 SV=1: Sigma70_r1_2: Sigma70_r2: Sigma70_r3: Sigma70_r4\tK03086 rpoD; RNA polymerase primary sigma factor" }, { "name":"SOIL9_50400 rna polymerase sigma factor : RNA polymerase sigma factor OS=uncultured planctomycete GN=HGMM_F09D09C22 PE=3 SV=1: Sigma70_r1_2: Sigma70_r2: Sigma70_r3: Sigma70_r4\tK03086 rpoD; RNA polymerase primary sigma factor" }, { "name":"SOIL9_51090 rna polymerase sigma factor : RNA polymerase sigma factor OS=uncultured planctomycete GN=HGMM_F09D09C22 PE=3 SV=1: Sigma70_r1_2: Sigma70_r2: Sigma70_r3: Sigma70_r4\tK03086 rpoD; RNA polymerase primary sigma factor" }, { "name":"SOIL9_83290 rna polymerase sigma70 : RNA polymerase sigma factor SigA OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=sigA PE=3 SV=1: Sigma70_r1_2: Sigma70_r2: Sigma70_r3: Sigma70_r4\tK03086 rpoD; RNA polymerase primary sigma factor" }, { "name":"SOIL9_28250 rna sigma 54 : RNA polymerase sigma-54 factor OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1313 PE=4 SV=1: Sigma54_AID: Sigma54_CBD: Sigma54_DBD\tK03092 rpoN; RNA polymerase sigma-54 factor" }, { "name":"SOIL9_13380 rna sigma 28 : RNA polymerase sigma factor for flagellar operon FliA OS=uncultured planctomycete GN=HGMM_F11F07C13 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2\tK02405 fliA; RNA polymerase sigma factor FliA" }, { "name":"SOIL9_67350 rna polymerase sigma70 : RNA polymerase sigma factor OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7408 PE=3 SV=1: Sigma70_r2: Sigma70_r3: Sigma70_r4\tK02405 fliA; RNA polymerase sigma factor FliA" } ] }, { "name":"04814 Motor proteins" }, { "name":"04820 Cytoskeleton in muscle cells", "children":[ { "name":"SOIL9_22170 enolase : Enolase OS=Brevibacillus panacihumi W25 GN=eno PE=3 SV=1: Enolase_N: Enolase_C\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]" } ] }, { "name":"04810 Regulation of actin cytoskeleton" } ] } ] }, { "name":"09150 Organismal Systems", "children":[ { "name":"09151 Immune system", "children":[ { "name":"04640 Hematopoietic cell lineage" }, { "name":"04610 Complement and coagulation cascades" }, { "name":"04611 Platelet activation" }, { "name":"04613 Neutrophil extracellular trap formation" }, { "name":"04620 Toll-like receptor signaling pathway" }, { "name":"04624 Toll and Imd signaling pathway" }, { "name":"04621 NOD-like receptor signaling pathway" }, { "name":"04622 RIG-I-like receptor signaling pathway" }, { "name":"04623 Cytosolic DNA-sensing pathway" }, { "name":"04625 C-type lectin receptor signaling pathway" }, { "name":"04650 Natural killer cell mediated cytotoxicity" }, { "name":"04612 Antigen processing and presentation" }, { "name":"04660 T cell receptor signaling pathway" }, { "name":"04658 Th1 and Th2 cell differentiation" }, { "name":"04659 Th17 cell differentiation" }, { "name":"04657 IL-17 signaling pathway" }, { "name":"04662 B cell receptor signaling pathway" }, { "name":"04664 Fc epsilon RI signaling pathway" }, { "name":"04666 Fc gamma R-mediated phagosome formation" }, { "name":"04670 Leukocyte transendothelial migration" }, { "name":"04672 Intestinal immune network for IgA production" }, { "name":"04062 Chemokine signaling pathway" } ] }, { "name":"09152 Endocrine system", "children":[ { "name":"04911 Insulin secretion" }, { "name":"04910 Insulin signaling pathway" }, { "name":"04922 Glucagon signaling pathway" }, { "name":"04923 Regulation of lipolysis in adipocytes" }, { "name":"04920 Adipocytokine signaling pathway" }, { "name":"03320 PPAR signaling pathway" }, { "name":"04929 GnRH secretion" }, { "name":"04912 GnRH signaling pathway" }, { "name":"04913 Ovarian steroidogenesis" }, { "name":"04915 Estrogen signaling pathway" }, { "name":"04914 Progesterone-mediated oocyte maturation" }, { "name":"04917 Prolactin signaling pathway" }, { "name":"04921 Oxytocin signaling pathway" }, { "name":"04926 Relaxin signaling pathway" }, { "name":"04935 Growth hormone synthesis, secretion and action" }, { "name":"04918 Thyroid hormone synthesis" }, { "name":"04919 Thyroid hormone signaling pathway" }, { "name":"04928 Parathyroid hormone synthesis, secretion and action" }, { "name":"04916 Melanogenesis" }, { "name":"04924 Renin secretion" }, { "name":"04614 Renin-angiotensin system" }, { "name":"04925 Aldosterone synthesis and secretion" }, { "name":"04927 Cortisol synthesis and secretion" } ] }, { "name":"09153 Circulatory system", "children":[ { "name":"04260 Cardiac muscle contraction" }, { "name":"04261 Adrenergic signaling in cardiomyocytes" }, { "name":"04270 Vascular smooth muscle contraction" } ] }, { "name":"09154 Digestive system", "children":[ { "name":"04970 Salivary secretion" }, { "name":"04971 Gastric acid secretion" }, { "name":"04972 Pancreatic secretion" }, { "name":"04976 Bile secretion" }, { "name":"04973 Carbohydrate digestion and absorption" }, { "name":"04974 Protein digestion and absorption" }, { "name":"04975 Fat digestion and absorption" }, { "name":"04979 Cholesterol metabolism" }, { "name":"04977 Vitamin digestion and absorption" }, { "name":"04981 Folate transport and metabolism [PATH:gms04981]", "children":[ { "name":"SOIL9_22550 5-formyltetrahydrofolate cyclo-ligase : 5-formyltetrahydrofolate cyclo-ligase OS=Rhodopirellula europaea SH398 GN=RESH_04932 PE=3 SV=1: 5-FTHF_cyc-lig\tK01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]" }, { "name":"SOIL9_10300 serine hydroxymethyltransferase : Serine hydroxymethyltransferase OS=Blastopirellula marina DSM 3645 GN=glyA PE=3 SV=1: SHMT\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" }, { "name":"SOIL9_75080 methionine synthase : Methionine synthase OS=Gloeobacter kilaueensis JS1 GN=metH PE=4 SV=1: S-methyl_trans: Pterin_bind: B12-binding_2: B12-binding: Met_synt_B12\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" } ] }, { "name":"04980 Cobalamin transport and metabolism [PATH:gms04980]", "children":[ { "name":"SOIL9_62490 cob yrinic acid -diamide adenosyltransferase : ATP--cobalamin adenosyltransferase OS=Nitrospirillum amazonense Y2 GN=AZA_43864 PE=4 SV=1: Cob_adeno_trans\tK00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]" }, { "name":"SOIL9_75080 methionine synthase : Methionine synthase OS=Gloeobacter kilaueensis JS1 GN=metH PE=4 SV=1: S-methyl_trans: Pterin_bind: B12-binding_2: B12-binding: Met_synt_B12\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" } ] }, { "name":"04978 Mineral absorption" } ] }, { "name":"09155 Excretory system", "children":[ { "name":"04962 Vasopressin-regulated water reabsorption" }, { "name":"04960 Aldosterone-regulated sodium reabsorption" }, { "name":"04961 Endocrine and other factor-regulated calcium reabsorption" }, { "name":"04964 Proximal tubule bicarbonate reclamation" }, { "name":"04966 Collecting duct acid secretion" } ] }, { "name":"09156 Nervous system", "children":[ { "name":"04724 Glutamatergic synapse" }, { "name":"04727 GABAergic synapse" }, { "name":"04725 Cholinergic synapse" }, { "name":"04728 Dopaminergic synapse" }, { "name":"04726 Serotonergic synapse" }, { "name":"04720 Long-term potentiation" }, { "name":"04730 Long-term depression" }, { "name":"04723 Retrograde endocannabinoid signaling" }, { "name":"04721 Synaptic vesicle cycle" }, { "name":"04722 Neurotrophin signaling pathway" } ] }, { "name":"09157 Sensory system", "children":[ { "name":"04744 Phototransduction" }, { "name":"04745 Phototransduction - fly" }, { "name":"04740 Olfactory transduction" }, { "name":"04742 Taste transduction" }, { "name":"04750 Inflammatory mediator regulation of TRP channels" } ] }, { "name":"09158 Development and regeneration", "children":[ { "name":"04320 Dorso-ventral axis formation" }, { "name":"04360 Axon guidance" }, { "name":"04361 Axon regeneration" }, { "name":"04380 Osteoclast differentiation" }, { "name":"04382 Cornified envelope formation", "children":[ { "name":"SOIL9_83430 histidine ammonia-lyase : Histidine ammonia-lyase OS=Rhodothermus marinus SG0.5JP17-172 GN=Rhom172_1197 PE=3 SV=1: Lyase_aromatic\tK01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]" } ] } ] }, { "name":"09149 Aging", "children":[ { "name":"04211 Longevity regulating pathway" }, { "name":"04212 Longevity regulating pathway - worm" }, { "name":"04213 Longevity regulating pathway - multiple species" } ] }, { "name":"09159 Environmental adaptation", "children":[ { "name":"04710 Circadian rhythm" }, { "name":"04713 Circadian entrainment" }, { "name":"04711 Circadian rhythm - fly" }, { "name":"04712 Circadian rhythm - plant" }, { "name":"04714 Thermogenesis" }, { "name":"04626 Plant-pathogen interaction" } ] } ] }, { "name":"09160 Human Diseases", "children":[ { "name":"09161 Cancer: overview", "children":[ { "name":"05200 Pathways in cancer" }, { "name":"05202 Transcriptional misregulation in cancer" }, { "name":"05206 MicroRNAs in cancer" }, { "name":"05205 Proteoglycans in cancer" }, { "name":"05204 Chemical carcinogenesis - DNA adducts" }, { "name":"05207 Chemical carcinogenesis - receptor activation" }, { "name":"05208 Chemical carcinogenesis - reactive oxygen species" }, { "name":"05203 Viral carcinogenesis" }, { "name":"05230 Central carbon metabolism in cancer" }, { "name":"05231 Choline metabolism in cancer" }, { "name":"05235 PD-L1 expression and PD-1 checkpoint pathway in cancer" } ] }, { "name":"09162 Cancer: specific types", "children":[ { "name":"05210 Colorectal cancer" }, { "name":"05212 Pancreatic cancer" }, { "name":"05225 Hepatocellular carcinoma" }, { "name":"05226 Gastric cancer" }, { "name":"05214 Glioma" }, { "name":"05216 Thyroid cancer" }, { "name":"05221 Acute myeloid leukemia" }, { "name":"05220 Chronic myeloid leukemia" }, { "name":"05217 Basal cell carcinoma" }, { "name":"05218 Melanoma" }, { "name":"05211 Renal cell carcinoma" }, { "name":"05219 Bladder cancer" }, { "name":"05215 Prostate cancer" }, { "name":"05213 Endometrial cancer" }, { "name":"05224 Breast cancer" }, { "name":"05222 Small cell lung cancer" }, { "name":"05223 Non-small cell lung cancer" } ] }, { "name":"09172 Infectious disease: viral", "children":[ { "name":"05166 Human T-cell leukemia virus 1 infection" }, { "name":"05170 Human immunodeficiency virus 1 infection" }, { "name":"05161 Hepatitis B" }, { "name":"05160 Hepatitis C" }, { "name":"05171 Coronavirus disease" }, { "name":"05164 Influenza A" }, { "name":"05162 Measles" }, { "name":"05168 Herpes simplex virus 1 infection" }, { "name":"05163 Human cytomegalovirus infection" }, { "name":"05167 Kaposi sarcoma-associated herpesvirus infection" }, { "name":"05169 Epstein-Barr virus infection" }, { "name":"05165 Human papillomavirus infection" } ] }, { "name":"09171 Infectious disease: bacterial", "children":[ { "name":"05110 Vibrio cholerae infection" }, { "name":"05120 Epithelial cell signaling in Helicobacter pylori infection" }, { "name":"05130 Pathogenic Escherichia coli infection" }, { "name":"05132 Salmonella infection" }, { "name":"05131 Shigellosis" }, { "name":"05135 Yersinia infection" }, { "name":"05133 Pertussis" }, { "name":"05134 Legionellosis" }, { "name":"05150 Staphylococcus aureus infection" }, { "name":"05152 Tuberculosis" }, { "name":"05100 Bacterial invasion of epithelial cells", "children":[ { "name":"SOIL9_43970 small gtp-binding protein : Leucine-rich-repeat protein OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_1973 PE=4 SV=1: LRR_4: LRR_6: LRR_6: LRR_6: LRR_6: LRR_8: Miro\tK13730 inlA; internalin A" }, { "name":"SOIL9_44970 leucine-rich repeat : Leucine-rich repeat protein, putative OS=Trypanosoma vivax (strain Y486) GN=TvY486_0039050 PE=4 SV=1: Pkinase: LRR_4: LRR_4: LRR_4: LRR_4: LRR_4\tK13730 inlA; internalin A" }, { "name":"SOIL9_48210 leucine-rich repeat : Leucine-rich repeat protein, putative OS=Trypanosoma vivax (strain Y486) GN=TvY486_0039050 PE=4 SV=1: LRR_7: Ras\tK13730 inlA; internalin A" } ] } ] }, { "name":"09174 Infectious disease: parasitic", "children":[ { "name":"05146 Amoebiasis" }, { "name":"05144 Malaria" }, { "name":"05145 Toxoplasmosis" }, { "name":"05140 Leishmaniasis" }, { "name":"05142 Chagas disease" }, { "name":"05143 African trypanosomiasis" } ] }, { "name":"09163 Immune disease", "children":[ { "name":"05310 Asthma" }, { "name":"05322 Systemic lupus erythematosus" }, { "name":"05323 Rheumatoid arthritis" }, { "name":"05320 Autoimmune thyroid disease" }, { "name":"05321 Inflammatory bowel disease" }, { "name":"05330 Allograft rejection" }, { "name":"05332 Graft-versus-host disease" }, { "name":"05340 Primary immunodeficiency" } ] }, { "name":"09164 Neurodegenerative disease", "children":[ { "name":"05010 Alzheimer disease" }, { "name":"05012 Parkinson disease" }, { "name":"05014 Amyotrophic lateral sclerosis" }, { "name":"05016 Huntington disease" }, { "name":"05017 Spinocerebellar ataxia" }, { "name":"05020 Prion disease" }, { "name":"05022 Pathways of neurodegeneration - multiple diseases" } ] }, { "name":"09165 Substance dependence", "children":[ { "name":"05030 Cocaine addiction" }, { "name":"05031 Amphetamine addiction" }, { "name":"05032 Morphine addiction" }, { "name":"05033 Nicotine addiction" }, { "name":"05034 Alcoholism" } ] }, { "name":"09166 Cardiovascular disease", "children":[ { "name":"05417 Lipid and atherosclerosis" }, { "name":"05418 Fluid shear stress and atherosclerosis" }, { "name":"05410 Hypertrophic cardiomyopathy" }, { "name":"05412 Arrhythmogenic right ventricular cardiomyopathy" }, { "name":"05414 Dilated cardiomyopathy" }, { "name":"05415 Diabetic cardiomyopathy" }, { "name":"05416 Viral myocarditis" } ] }, { "name":"09167 Endocrine and metabolic disease", "children":[ { "name":"04930 Type II diabetes mellitus" }, { "name":"04940 Type I diabetes mellitus" }, { "name":"04950 Maturity onset diabetes of the young" }, { "name":"04936 Alcoholic liver disease" }, { "name":"04932 Non-alcoholic fatty liver disease" }, { "name":"04931 Insulin resistance" }, { "name":"04933 AGE-RAGE signaling pathway in diabetic complications" }, { "name":"04934 Cushing syndrome" } ] }, { "name":"09175 Drug resistance: antimicrobial", "children":[ { "name":"01501 beta-Lactam resistance [PATH:gms01501]", "children":[ { "name":"SOIL9_15440 transcriptional regulator : Putative transcriptional regulator OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1395 PE=4 SV=1: Penicillinase_R\tK02171 blaI; BlaI family transcriptional regulator, penicillinase repressor" }, { "name":"SOIL9_35030 penicillinase repressor : Probable Penicillinase repressor OS=Planctomyces maris DSM 8797 GN=PM8797T_09109 PE=4 SV=1: Penicillinase_R\tK02171 blaI; BlaI family transcriptional regulator, penicillinase repressor" }, { "name":"SOIL9_41640 transcriptional regulator : Transcriptional repressor, CopY family OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_3893 PE=4 SV=1: Penicillinase_R\tK02171 blaI; BlaI family transcriptional regulator, penicillinase repressor" }, { "name":"SOIL9_73910 family transcriptional regulator : Transcriptional repressor CopY OS=Sorangium cellulosum (strain So ce56) GN=sce6610 PE=4 SV=1: Penicillinase_R: DDE_Tnp_IS1595\tK02171 blaI; BlaI family transcriptional regulator, penicillinase repressor" }, { "name":"SOIL9_18810 rnd family efflux transporter mfp subunit : RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0100 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_23810 rnd family efflux transporter mfp subunit : Efflux transporter, RND family, MFP subunit OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1220 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_26910 rnd transporter mfp subunit : Efflux transporter, RND family, MFP subunit OS=Burkholderia sp. (strain CCGE1002) GN=BC1002_5413 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_66350 rnd family efflux transporter mfp subunit : RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1026 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_74170 hemolysin d : Putative Co\/Zn\/Cd efflux system membrane fusion protein OS=Sandaracinus amylolyticus GN=DB32_2325 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_11990 hydrophobe amphiphile efflux-1 family : Transporter, hydrophobe\/amphiphile efflux-1 (HAE1) family OS=Rhodopirellula maiorica SM1 GN=RMSM_07794 PE=4 SV=1: ACR_tran: ACR_tran: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_18820 acriflavin resistance protein : Cation\/multidrug efflux pump OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2114 PE=4 SV=1: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_23820 acriflavin resistance protein : Acriflavin resistance protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1221 PE=4 SV=1: ACR_tran: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_26920 rnd transporter : Acriflavin resistance protein OS=Gloeobacter kilaueensis JS1 GN=GKIL_3115 PE=4 SV=1: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_66360 rnd transporter : Acriflavin resistance protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0559 PE=4 SV=1: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_74160 multidrug transporter : RND efflux system, inner membrane transporter CmeB OS=Sandaracinus amylolyticus GN=DB32_2324 PE=4 SV=1: ACR_tran: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_74150 membrane protein : Outer membrane protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6898 PE=4 SV=1: OEP: OEP\tK18139 oprM; outer membrane protein, multidrug efflux system" }, { "name":"SOIL9_07680 outer membrane efflux protein : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_09634 PE=4 SV=1: OEP\tK12340 tolC; outer membrane protein" } ] }, { "name":"01502 Vancomycin resistance [PATH:gms01502]", "children":[ { "name":"SOIL9_21150 d-alanine--d-alanine ligase : D-alanine--D-alanine ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6203 PE=4 SV=1: Dala_Dala_lig_C\tK01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]" }, { "name":"SOIL9_31470 d-alanine--d-alanine ligase : D-alanine--D-alanine ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6202 PE=4 SV=1: Dala_Dala_lig_C\tK01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]" }, { "name":"SOIL9_09490 Endonuclease\/exonuclease\/phosphatase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_3201 PE=4 SV=1: Exo_endo_phos\tK18353 vanJ; vancomycin resistance protein VanJ" } ] }, { "name":"01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:gms01503]", "children":[ { "name":"SOIL9_85640 n-acetylmuramoyl-l-alanine amidase : N-acetylmuramoyl-L-alanine amidase OS=Clostridium sp. CAG:451 GN=BN663_00049 PE=4 SV=1: Amidase_3\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SOIL9_10890 pdz dhr glgf domain protein : PDZ\/DHR\/GLGF domain protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3926 PE=4 SV=1: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_14020 peptidase s1 and s6 chymotrypsin hap : Peptidase S1 and S6 chymotrypsin\/Hap OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1379 PE=4 SV=1: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_19300 pdz dhr glgf domain-containing protein : Trypsin-like serine protease with C-terminal PDZ domain OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5148 PE=4 SV=1: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_24480 serine protease : Serine protease OS=Azospirillum brasilense GN=ABAZ39_16055 PE=4 SV=1: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_27940 protease do : Serine protease, trypsin family OS=uncultured planctomycete GN=HGMM_F01A04C13 PE=4 SV=1: Trypsin_2: PDZ_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_42480 protease do : Protease Do OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1472 PE=4 SV=1: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_48370 peptidase s1 and s6 chymotrypsin hap : Peptidase S1 and S6 chymotrypsin\/Hap OS=Akkermansia muciniphila CAG:154 GN=BN502_00546 PE=4 SV=1: Trypsin_2: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_63250 serine protease : HtrA2 peptidase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1243 PE=4 SV=1: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_78250 unnamed protein product; BLAST_uniprot: no_hits\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_82080 serine protease : Putative periplasmic serine endoprotease DegP-like OS=alpha proteobacterium Q-1 GN=htrA PE=4 SV=1: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_12550 peptidyl-prolyl cis-trans isomerase : Peptidyl-prolyl cis-trans isomerase, cyclophilin type OS=Fimbriimonas ginsengisoli Gsoil 348 GN=OP10G_4301 PE=3 SV=1: Pro_isomerase\tK03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]" }, { "name":"SOIL9_18810 rnd family efflux transporter mfp subunit : RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0100 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_23810 rnd family efflux transporter mfp subunit : Efflux transporter, RND family, MFP subunit OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1220 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_26910 rnd transporter mfp subunit : Efflux transporter, RND family, MFP subunit OS=Burkholderia sp. (strain CCGE1002) GN=BC1002_5413 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_66350 rnd family efflux transporter mfp subunit : RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1026 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_74170 hemolysin d : Putative Co\/Zn\/Cd efflux system membrane fusion protein OS=Sandaracinus amylolyticus GN=DB32_2325 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_11990 hydrophobe amphiphile efflux-1 family : Transporter, hydrophobe\/amphiphile efflux-1 (HAE1) family OS=Rhodopirellula maiorica SM1 GN=RMSM_07794 PE=4 SV=1: ACR_tran: ACR_tran: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_18820 acriflavin resistance protein : Cation\/multidrug efflux pump OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2114 PE=4 SV=1: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_23820 acriflavin resistance protein : Acriflavin resistance protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1221 PE=4 SV=1: ACR_tran: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_26920 rnd transporter : Acriflavin resistance protein OS=Gloeobacter kilaueensis JS1 GN=GKIL_3115 PE=4 SV=1: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_66360 rnd transporter : Acriflavin resistance protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0559 PE=4 SV=1: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_74160 multidrug transporter : RND efflux system, inner membrane transporter CmeB OS=Sandaracinus amylolyticus GN=DB32_2324 PE=4 SV=1: ACR_tran: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_07680 outer membrane efflux protein : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_09634 PE=4 SV=1: OEP\tK12340 tolC; outer membrane protein" }, { "name":"SOIL9_64970 udp-n-acetylglucosamine acyltransferase : Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3720 PE=4 SV=1: Hexapep: Hexapep: Acetyltransf_11\tK00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]" } ] } ] }, { "name":"09176 Drug resistance: antineoplastic", "children":[ { "name":"01521 EGFR tyrosine kinase inhibitor resistance" }, { "name":"01524 Platinum drug resistance" }, { "name":"01523 Antifolate resistance" }, { "name":"01522 Endocrine resistance" } ] } ] }, { "name":"09180 Brite Hierarchies", "children":[ { "name":"09181 Protein families: metabolism", "children":[ { "name":"01000 Enzymes [BR:gms01000]" }, { "name":"01001 Protein kinases [BR:gms01001]", "children":[ { "name":"SOIL9_31690 serine threonine protein kinase : Putative serine\/threonine protein kinase OS=Gemmata sp. Wa1-1 PE=4 SV=1: Pkinase\tK11912 ppkA; serine\/threonine-protein kinase PpkA [EC:2.7.11.1]" }, { "name":"SOIL9_00410 serine threonine protein kinase : Serine\/threonine protein kinase OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_2829 PE=4 SV=1: Pkinase: FGE-sulfatase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_00860 serine threonine protein kinase : Probable serine\/threonine-protein kinase OS=Blastopirellula marina DSM 3645 GN=DSM3645_09987 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_01880 serine threonine protein kinase : Putative serine\/threonine protein kinase OS=Gemmata sp. Wa1-1 PE=4 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_03460 serine threonine protein kinase : Serine\/threonine protein kinase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1436 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_03600 serine threonine protein kinase : Serine\/threonine protein kinase OS=Rhodopirellula sp. SWK7 GN=RRSWK_05938 PE=3 SV=1: HDOD: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_04550 serine threonine protein kinase : Putative serine\/threonine protein kinase OS=Gemmata sp. Wa1-1 PE=3 SV=1: Pkinase: TPR_12: TPR_12: TPR_12: TPR_12: TPR_12: TPR_12\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_04920 serine threonine protein kinase : Serine\/threonine protein kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0905 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_06220 serine threonine protein kinase : Putative serine\/threonine protein kinase (Fragment) OS=Gemmata sp. Wa1-1 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_09140 serine threonine protein kinase : Serine\/threonine protein kinase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1882 PE=4 SV=1: Pkinase: TPR_12: TPR_10: TPR_12: TPR_12: TPR_12\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_09500 serine threonine protein kinase : Serine\/threonine protein kinase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_3087 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_10330 serine threonine protein kinase : Serine\/threonine protein kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1407 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_10940 serine threonine protein kinase : Serine\/threonine protein kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1051 PE=4 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_11590 serine threonine protein kinase : Serine\/threonine-protein kinase OS=Planctomyces maris DSM 8797 GN=PM8797T_31735 PE=4 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_14760 serine threonine protein kinase : Tetratricopeptide repeat protein,protein kinase family protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4434 PE=3 SV=1: Pkinase: TPR_11: TPR_2\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_15080 serine threonine protein kinase : Cyclin-dependent kinase-activating kinase (Fragment) OS=Gemmata sp. Wa1-1 PE=3 SV=1: Pkinase: TPR_2\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_15990 serine threonine protein kinase : Serine\/threonine protein kinase with WD40 repeats OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1637 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_17100 serine threonine protein kinase : Putative uncharacterized protein OS=Gemmata sp. Wa1-1 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_18910 serine threonine protein kinase : Serine\/threonine protein kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6649 PE=3 SV=1: Pkinase: TPR_2: TPR_11: TPR_9\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_19770 serine threonine protein kinase : Serine\/threonine protein kinase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1436 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_20210 serine threonine protein kinase : Putative uncharacterized protein OS=Gemmata sp. Wa1-1 PE=3 SV=1: Pkinase: TPR_11\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_20450 serine threonine protein kinase : Protein containing Serine\/threonine protein kinase OS=Rhodopirellula europaea 6C GN=RE6C_01459 PE=4 SV=1: Pkinase: WD40: WD40: WD40\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_20460 serine threonine protein kinase : Serine\/threonine protein kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6153 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_20760 protein kinase : Putative uncharacterized protein (Fragment) OS=Gemmata sp. Wa1-1 PE=3 SV=1: Pkinase: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_21070 serine threonine-protein kinase : Putative serine\/threonine-protein kinase OS=Planctomyces maris DSM 8797 GN=PM8797T_31088 PE=4 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_22110 serine threonine protein kinase : Serine\/threonine protein kinase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3450 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_24400 serine threonine protein partial : Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1: Pkinase: NPCBM\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_27080 serine threonine protein kinase : Uncharacterized protein OS=Streptomyces sp. HPH0547 GN=HMPREF1486_05159 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_27490 serine threonine protein kinase : Serine\/threonine protein kinase-related protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_4042 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_27600 serine threonine protein kinase : Serine\/threonine protein kinase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1188 PE=4 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_28560 serine threonine protein kinase : Serine\/threonine protein kinase (Fragment) OS=Rhodopirellula maiorica SM1 GN=RMSM_05438 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_28860 serine threonine protein kinase : Serine\/threonine protein kinase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_2195 PE=3 SV=1: Pkinase: DUF303\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_29690 serine threonine protein kinase : Adenylate\/guanylate cyclase (Fragment) OS=Rhodopirellula maiorica SM1 GN=RMSM_07014 PE=4 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_29920 serine threonine protein kinase : Putative serine\/threonine protein kinase (Fragment) OS=Gemmata sp. Wa1-1 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_30780 serine threonine protein kinase : Putative serine\/threonine protein kinase (Fragment) OS=Gemmata sp. Wa1-1 PE=3 SV=1: Pkinase: DUF303\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_30970 serine threonine protein kinase : Protein kinase family protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0866 PE=4 SV=1: Pkinase: TPR_11: TPR_11: TPR_16\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_31540 wd40 repeat-containing protein : Protein kinase family protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7050 PE=4 SV=1: Pkinase: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_37100 serine threonine protein kinase : Tetratricopeptide repeat protein,protein kinase family protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4434 PE=3 SV=1: Pkinase: TPR_2: TPR_1\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_37290 serine threonine protein partial : Serine\/threonine protein kinase (Fragment) OS=Rhodopirellula maiorica SM1 GN=RMSM_03539 PE=4 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_37400 serine threonine protein kinase : Probable serine\/threonine-protein kinase pknB OS=Planctomyces maris DSM 8797 GN=PM8797T_26140 PE=3 SV=1: Pkinase: FGE-sulfatase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_37890 serine threonine protein kinase : Serine\/threonine protein kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1051 PE=4 SV=1: Pkinase: DUF4384\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_38180 serine threonine protein kinase : Serine\/threonine protein kinase-related protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0540 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_38220 serine threonine protein kinase : Protein kinase family protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6753 PE=4 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_40240 serine threonine protein kinase : Serine\/threonine protein kinase OS=Planctomyces maris DSM 8797 GN=PM8797T_06517 PE=4 SV=1: HDOD: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_40430 serine threonine protein kinase : Protein kinase family protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0866 PE=4 SV=1: Pkinase: Pkinase: TPR_11: TPR_11: TPR_9\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_40600 serine threonine protein kinase : Serine\/threonine-protein kinase PrkC OS=Candidatus Accumulibacter sp. SK-01 GN=prkC_4 PE=4 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_42130 serine threonine-protein kinase : Putative PAS\/PAC sensor protein OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4306 PE=4 SV=1: Pkinase: PAS_4: PAS_9\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_43710 serine threonine protein kinase : WD40 repeat-containing protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7396 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_46090 serine threonine protein kinase : Cyclin-dependent kinase-activating kinase OS=Gemmata sp. Wa1-1 PE=4 SV=1: Pkinase: DUF1080\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_47360 serine threonine protein kinase : Serine\/threonine protein kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6649 PE=3 SV=1: Pkinase: Pkinase: TPR_16\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_48410 serine threonine protein kinase : Serine\/threonine protein kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3409 PE=4 SV=1: Pkinase: FGE-sulfatase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_50240 serine threonine protein kinase : Serine\/threonine protein kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2761 PE=4 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_52520 serine threonine protein kinase : Putative serine\/threonine protein kinase OS=Gemmata sp. Wa1-1 PE=3 SV=1: Pkinase: TPR_2: TPR_10: TPR_12: TPR_12\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_52720 serine threonine protein kinase : Serine\/threonine protein kinase OS=Planctomyces maris DSM 8797 GN=PM8797T_27372 PE=4 SV=1: Pkinase: WD40: WD40: WD40: WD40: WD40\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_52760 serine threonine protein kinase : Tetratricopeptide repeat protein,protein kinase family protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4434 PE=3 SV=1: Pkinase: TPR_16\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_54250 serine threonine protein kinase : Tetratricopeptide repeat protein,protein kinase family protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4434 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_54690 serine threonine protein kinase : Putative serine\/threonine protein kinase (Fragment) OS=Gemmata sp. Wa1-1 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_54890 serine threonine protein kinase : Serine\/threonine protein kinase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3450 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_56180 serine threonine protein kinase : Putative serine\/threonine protein kinase (Fragment) OS=Gemmata sp. Wa1-1 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_56190 serine threonine protein kinase : Putative serine\/threonine protein kinase (Fragment) OS=Gemmata sp. Wa1-1 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_56960 serine threonine protein kinase : Cyclin-dependent kinase-activating kinase OS=Gemmata sp. Wa1-1 PE=4 SV=1: Pkinase: DUF1080\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_57010 serine threonine protein kinase : Putative serine\/threonine protein kinase (Fragment) OS=Gemmata sp. Wa1-1 PE=3 SV=1: Pkinase: Response_reg: HD_5\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_57750 serine threonine protein kinase : Serine\/threonine protein kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6348 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_57760 serine threonine protein kinase : Putative serine\/threonine protein kinase OS=Nocardia nova SH22a GN=NONO_c35600 PE=3 SV=1: Pkinase: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_57780 serine threonine protein kinase : Serine\/threonine protein kinase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_0486 PE=4 SV=1: Pkinase: Tubulin_2\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_58350 serine threonine protein kinase : Serine\/threonine protein kinase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4559 PE=3 SV=1: Pkinase: DJ-1_PfpI\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_59500 serine threonine protein kinase : Putative serine\/threonine protein kinase OS=Gemmata sp. Wa1-1 PE=4 SV=1: Pkinase: PilZ\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_60660 serine threonine protein kinase : Serine\/threonine protein kinase with TPR repeats OS=Koribacter versatilis (strain Ellin345) GN=Acid345_2310 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_61360 serine threonine protein kinase : Tetratricopeptide repeat protein,protein kinase family protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4434 PE=3 SV=1: Pkinase: TPR_11: TPR_1\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_62600 serine threonine protein partial : Serine\/threonine protein kinase (Fragment) OS=Rhodopirellula maiorica SM1 GN=RMSM_03539 PE=4 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_65390 serine threonine protein kinase : Probable protein kinase yloP-putative serine\/threonine protein kinase OS=Planctomyces maris DSM 8797 GN=PM8797T_01129 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_65400 serine threonine protein partial : Putative serine\/threonine protein kinase (Fragment) OS=Gemmata sp. Wa1-1 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_66960 serine threonine protein kinase : Putative serine\/threonine protein kinase OS=Gemmata sp. Wa1-1 PE=4 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_67430 wd40 repeat-containing protein : WD40 repeat-containing protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3618 PE=4 SV=1: Pkinase: WD40: WD40: WD40\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_67500 serine threonine protein kinase : Putative serine\/threonine protein kinase OS=Gemmata sp. Wa1-1 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_67760 serine threonine protein kinase : Serine\/threonine protein kinase OS=Blastopirellula marina DSM 3645 GN=DSM3645_00990 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_69420 wd40 repeat-containing protein : Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1: Pkinase: WD40: WD40\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_70060 serine threonine protein kinase : Serine\/threonine protein kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2761 PE=4 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_72440 serine threonine-protein kinase : Serine\/threonine protein kinase-related protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3456 PE=4 SV=1: Pkinase: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_73780 serine threonine protein kinase : Putative serine\/threonine protein kinase (Fragment) OS=Gemmata sp. Wa1-1 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_75180 serine threonine protein kinase : Protein kinase family protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2100 PE=3 SV=1: Pkinase_Tyr\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_75850 serine threonine protein kinase : Serine\/threonine protein kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3821 PE=4 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_75860 serine threonine protein kinase : Probable serine\/threonine-protein kinase pknA OS=Planctomyces maris DSM 8797 GN=PM8797T_06787 PE=4 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_78450 serine threonine protein kinase : Putative serine\/threonine protein kinase OS=Gemmata sp. Wa1-1 PE=3 SV=1: Pkinase: TPR_12: TPR_12: TPR_12: TPR_12: TPR_12\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_79250 serine threonine protein kinase : Serine\/threonine protein kinase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1601 PE=4 SV=1: Pkinase: RDD\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_80150 serine threonine protein kinase : Putative uncharacterized protein OS=Gemmata sp. Wa1-1 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_81900 serine threonine kinase : Serine\/threonine kinase OS=Microcystis aeruginosa PCC 9807 GN=MICAF_7120001 PE=4 SV=1: Pkinase: DUF4062: NACHT: FGE-sulfatase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_82580 serine threonine protein kinase : Putative serine\/threonine protein kinase OS=Gemmata sp. Wa1-1 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_82600 serine threonine protein kinase : Serine\/threonine protein kinase OS=Planctomyces maris DSM 8797 GN=PM8797T_04085 PE=3 SV=1: Pkinase: FGE-sulfatase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_83570 serine threonine protein kinase : Serine\/threonine protein kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0905 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_85450 serine threonine protein kinase : Serine\/threonine protein kinase-related protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_4000 PE=3 SV=1: Pkinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SOIL9_01360 unnamed protein product; BLAST_uniprot: no_hits\tK04757 rsbW; serine\/threonine-protein kinase RsbW [EC:2.7.11.1]" }, { "name":"SOIL9_04660 unnamed protein product; BLAST_uniprot: no_hits\tK04757 rsbW; serine\/threonine-protein kinase RsbW [EC:2.7.11.1]" }, { "name":"SOIL9_21000 serine threonine protein kinase : Serine\/threonine protein kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0241 PE=4 SV=1: Pkinase\tK08884 K08884; serine\/threonine protein kinase, bacterial [EC:2.7.11.1]" }, { "name":"SOIL9_70350 serine threonine protein kinase : Serine\/threonine protein kinase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2224 PE=4 SV=1: Pkinase\tK08884 K08884; serine\/threonine protein kinase, bacterial [EC:2.7.11.1]" }, { "name":"SOIL9_20180 exopolysaccharide biosynthesis protein : Capsular exopolysaccharide biosynthesis protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5456 PE=4 SV=1: Wzz: AAA_31\tK16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]" }, { "name":"SOIL9_63380 protein-tyrosine kinase : Capsular exopolysaccharide biosynthesis protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2488 PE=4 SV=1: Wzz: AAA_31\tK16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]" }, { "name":"SOIL9_83200 exopolysaccharide biosynthesis protein : Capsular exopolysaccharide biosynthesis protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5456 PE=4 SV=1: AAA_31\tK16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]" }, { "name":"SOIL9_78390 histidine kinase : Histidine kinase OS=Hyphomicrobium denitrificans 1NES1 GN=HYPDE_40403 PE=4 SV=1: 2CSK_N: HAMP: HisKA: HATPase_c\tK07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]" }, { "name":"SOIL9_02650 histidine kinase : Osmosensitive K+ channel His kinase sensor OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5539 PE=4 SV=1: KdpD: Usp\tK07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]" }, { "name":"SOIL9_09120 sensor protein : Histidine kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2375 PE=4 SV=1: HisKA: HATPase_c\tK07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]" }, { "name":"SOIL9_10510 histidine kinase : Histidine kinase OS=uncultured planctomycete GN=HGMM_F12C05C13 PE=4 SV=1: HisKA: HATPase_c\tK07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]" }, { "name":"SOIL9_40710 histidine kinase : Histidine kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1279 PE=4 SV=1: HisKA: HATPase_c\tK07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]" }, { "name":"SOIL9_02660 multi-sensor signal transduction histidine kinase : Histidine kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5540 PE=4 SV=1: HAMP: PAS_4: HisKA: HATPase_c\tK11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]" }, { "name":"SOIL9_77180 multi-sensor signal transduction histidine kinase : Histidine kinase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2815 PE=4 SV=1: HAMP: HisKA: HATPase_c\tK11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]" }, { "name":"SOIL9_27790 histidine kinase : Histidine kinase OS=Rhodopirellula maiorica SM1 GN=RMSM_05833 PE=4 SV=1: HisKA: HATPase_c\tK02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]" }, { "name":"SOIL9_38940 integral membrane sensor signal transduction histidine kinase : Histidine kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3191 PE=4 SV=1: HAMP: HisKA: HATPase_c\tK02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]" }, { "name":"SOIL9_05810 signal transduction histidine kinase : Histidine kinase OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3522 PE=4 SV=1: Hpt: H-kinase_dim\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_09790 chemotaxis protein : Histidine kinase OS=Desulfohalobium retbaense (strain DSM 5692) GN=Dret_0656 PE=4 SV=1: Hpt: Hpt: H-kinase_dim: HATPase_c: CheW\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_19500 chemotaxis protein : Histidine kinase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3074 PE=4 SV=1: Hpt: H-kinase_dim: HATPase_c: CheW: CheW\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_36700 chemotaxis protein : Histidine kinase OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3522 PE=4 SV=1: Hpt: H-kinase_dim: HATPase_c: CheW\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_51530 signal transduction histidine kinase : CheA signal transduction histidine kinase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=Anae109_2367 PE=4 SV=1: Hpt: HATPase_c: CheW: Response_reg\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_06390 signal transduction histidine kinase : Response regulator receiver domain protein OS=bacterium UASB270 GN=U27_04003 PE=4 SV=1: Hpt: HATPase_c: CheW: Response_reg\tK13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE" }, { "name":"SOIL9_18220 sensor histidine kinase : ATPase OS=Microvirga aerilata GN=JH26_25195 PE=4 SV=1: PAS_2: GAF: PHY: HisKA: HATPase_c\tK11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]" }, { "name":"SOIL9_12780 pas domain s-box : Uncharacterized protein OS=uncultured bacterium GN=ACD_75C00961G0003 PE=4 SV=1: PAS_9: PAS_4: PAS_8: PAS_9: HisKA: HATPase_c: Response_reg\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"SOIL9_13580 pas pac sensor hybrid histidine kinase : PAS\/PAC sensor hybrid histidine kinase OS=Haliangium ochraceum (strain DSM 14365 \/ JCM 11303 \/ SMP-2) GN=Hoch_2685 PE=4 SV=1: PAS_8: PAS_4: HisKA: HATPase_c: Response_reg\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"SOIL9_15640 multi-sensor hybrid histidine kinase : PAS\/PAC sensor hybrid histidine kinase OS=uncultured bacterium GN=ACD_75C00374G0005 PE=4 SV=1: PAS_4: PAS_3: PAS_8: PAS_3: HisKA: HATPase_c: Response_reg\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"SOIL9_18140 pas pac sensor hybrid histidine kinase : Histidine kinase OS=uncultured planctomycete GN=HGMM_F01A04C16 PE=4 SV=1: PAS_4: HisKA: HATPase_c: Response_reg\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"SOIL9_40410 pas pac sensor hybrid histidine kinase : Sensor histidine kinase response regulator, PAS and PAS domain-containing OS=Geobacter bemidjiensis (strain Bem \/ ATCC BAA-1014 \/ DSM 16622) GN=Gbem_3878 PE=4 SV=1: PAS_9: PAS_8: PAS_4: HisKA: HATPase_c: Response_reg\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"SOIL9_47350 multi-sensor hybrid histidine kinase : Multi-sensor hybrid histidine kinase OS=Spirochaeta smaragdinae (strain DSM 11293 \/ JCM 15392 \/ SEBR 4228) GN=Spirs_1827 PE=4 SV=1: Response_reg: PAS_4: HisKA: HATPase_c: Response_reg\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"SOIL9_80180 pas pac sensor hybrid histidine kinase : PAS\/PAC sensor hybrid histidine kinase OS=Caldithrix abyssi DSM 13497 GN=Calab_2608 PE=4 SV=1: PAS: PAS: PAS_3: HisKA: HATPase_c: Response_reg\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"SOIL9_28340 histidine kinase : Signal transduction histidine kinase, nitrogen specific, NtrB OS=uncultured bacterium GN=ACD_75C00451G0002 PE=4 SV=1: PAS_9: HisKA: HATPase_c\tK14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]" }, { "name":"SOIL9_34310 signal transduction histidine kinase : PAS domain S-box OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7544 PE=4 SV=1: HAMP: PAS_9: HisKA: HATPase_c: Response_reg: Response_reg: Hpt\tK11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]" } ] }, { "name":"01009 Protein phosphatases and associated proteins [BR:gms01009]", "children":[ { "name":"SOIL9_34650 s-adenosyl-l-homocysteine hydrolase : Adenosylhomocysteinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ahcY PE=3 SV=1: AdoHcyase: AdoHcyase_NAD\tK01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]" }, { "name":"SOIL9_59030 heat shock protein 90 : Chaperone protein HtpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1: HATPase_c_3: HSP90\tK04079 HSP90A; molecular chaperone HtpG" }, { "name":"SOIL9_04090 serine threonine protein phosphatase : Serine\/threonine protein phosphatase OS=Gemmata sp. Wa1-1 PE=4 SV=1: PP2C\tK20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]" }, { "name":"SOIL9_27370 protein serine threonine phosphatase : Phosphoprotein phosphatase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2087 PE=4 SV=1: PP2C_2\tK20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]" }, { "name":"SOIL9_28470 phosphoprotein phosphatase : Protein serine\/threonine phosphatase OS=Rhodopirellula maiorica SM1 GN=RMSM_04915 PE=4 SV=1: PP2C_2\tK20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]" }, { "name":"SOIL9_24490 protein tyrosine serine phosphatase : Protein serine\/threonine\/tyrosine phosphatase, putative OS=Pelobacter carbinolicus (strain DSM 2380 \/ Gra Bd 1) GN=Pcar_2841 PE=4 SV=2: Y_phosphatase2\tK18045 SIW14; tyrosine-protein phosphatase SIW14 [EC:3.1.3.48]" } ] }, { "name":"01002 Peptidases and inhibitors [BR:gms01002]", "children":[ { "name":"SOIL9_10530 lipoprotein signal peptidase : Lipoprotein signal peptidase OS=Cellvibrio sp. BR GN=lspA PE=3 SV=1: Peptidase_A8\tK03101 lspA; signal peptidase II [EC:3.4.23.36]" }, { "name":"SOIL9_59860 peptidase a24a prepilin type iv : Type IV prepilin peptidase CpaA-like protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_06439 PE=4 SV=1: Peptidase_A24\tK02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]" }, { "name":"SOIL9_83100 unnamed protein product; BLAST_uniprot: no_hits\tK03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]" }, { "name":"SOIL9_00600 gmp synthase : GMP synthase [glutamine-hydrolyzing] OS=Rhodopirellula baltica (strain SH1) GN=guaA PE=3 SV=1: GATase: NAD_synthase: GMP_synt_C\tK01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]" }, { "name":"SOIL9_26870 peptidase c26 : Peptidase C26 OS=Gemmatimonadetes bacterium KBS708 GN=J421_0419 PE=4 SV=1: Peptidase_C26\tK07010 K07010; putative glutamine amidotransferase" }, { "name":"SOIL9_75120 peptidase c26 : Putative glutamine amidotransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6680 PE=4 SV=1: Peptidase_C26\tK07010 K07010; putative glutamine amidotransferase" }, { "name":"SOIL9_80440 amidophosphoribosyltransferase : Amidophosphoribosyltransferase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2159 PE=3 SV=1: GATase_6: Pribosyltran\tK00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]" }, { "name":"SOIL9_14000 glutamate synthase : Glutamate synthase (Ferredoxin) OS=Truepera radiovictrix (strain DSM 17093 \/ CIP 108686 \/ LMG 22925 \/ RQ-24) GN=Trad_0209 PE=4 SV=1: GATase_2: Glu_syn_central: Glu_synthase: GXGXG\tK00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]" }, { "name":"SOIL9_28990 glutamate synthase : Glutamate synthase (NADH) large subunit OS=Chthonomonas calidirosea (strain DSM 23976 \/ ICMP 18418 \/ T49) GN=CCALI_01654 PE=4 SV=1: GATase_2: Glu_syn_central: Glu_synthase: GXGXG\tK00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]" }, { "name":"SOIL9_20360 glutamine amidotransferase : Glutamine--fructose-6-phosphate aminotransferase [isomerizing] OS=uncultured planctomycete GN=glmS PE=3 SV=1: GATase_6: SIS: SIS\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]" }, { "name":"SOIL9_83120 glutamine amidotransferase : Glutamine--fructose-6-phosphate aminotransferase [isomerizing] OS=uncultured planctomycete GN=glmS PE=3 SV=1: GATase_6: SIS: SIS\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]" }, { "name":"SOIL9_20890 asparagine synthase : Asparagine synthase OS=Rhodopirellula maiorica SM1 GN=RMSM_02412 PE=4 SV=1: Asn_synthase\tK01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]" }, { "name":"SOIL9_75980 asparagine synthase : Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1: GATase_7: Asn_synthase\tK01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]" }, { "name":"SOIL9_46600 peptidase : ThiJ\/PfpI domain protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4597 PE=4 SV=1: DJ-1_PfpI\tK05520 yhbO; deglycase [EC:3.5.1.124]" }, { "name":"SOIL9_46910 glutamine amidotransferase : Intracellular protease, PfpI family OS=Roseiflexus castenholzii (strain DSM 13941 \/ HLO8) GN=Rcas_2023 PE=4 SV=1: DJ-1_PfpI\tK05520 yhbO; deglycase [EC:3.5.1.124]" }, { "name":"SOIL9_65130 glutamine amidotransferase : Intracellular protease, PfpI family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6090 PE=4 SV=1: DJ-1_PfpI\tK05520 yhbO; deglycase [EC:3.5.1.124]" }, { "name":"SOIL9_74000 peptidase : Intracellular protease, PfpI family OS=Methanohalobium evestigatum (strain DSM 3721 \/ OCM 161 \/ Z-7303) GN=Metev_0694 PE=4 SV=1: DJ-1_PfpI\tK05520 yhbO; deglycase [EC:3.5.1.124]" }, { "name":"SOIL9_31660 family transcriptional regulator : ABC transporter subfamily C PrsD OS=Bradyrhizobium sp. DFCI-1 GN=C207_04323 PE=4 SV=1: DUF4066\tK18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]" }, { "name":"SOIL9_42220 abortive phage infection protein : Putative metal-dependent membrane protease OS=Planctomyces maris DSM 8797 GN=PM8797T_29258 PE=4 SV=1: Abi\tK07052 K07052; CAAX protease family protein" }, { "name":"SOIL9_79650 abortive infection protein : Abortive infection protein OS=Paludibacter propionicigenes (strain DSM 17365 \/ JCM 13257 \/ WB4) GN=Palpr_1700 PE=4 SV=1: Abi\tK07052 K07052; CAAX protease family protein" }, { "name":"SOIL9_09640 peptidase m3a and m3b thimet oligopeptidase f : Oligoendopeptidase F OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2369 PE=3 SV=1: Peptidase_M3: Peptidase_M3\tK01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]" }, { "name":"SOIL9_32090 Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0066 PE=4 SV=1: Peptidase_M15_4\tK17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]" }, { "name":"SOIL9_16450 peptidase m16 : Predicted Zn-dependent peptidases OS=bacterium UASB270 GN=U27_00685 PE=3 SV=1: Peptidase_M16: Peptidase_M16_C: Peptidase_M16: Peptidase_M16_C\tK07263 pqqL; zinc protease [EC:3.4.24.-]" }, { "name":"SOIL9_47520 peptidase m16 domain-containing protein : Peptidase M16 domain protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0240 PE=3 SV=1: Peptidase_M16: Peptidase_M16_C: Peptidase_M16_C\tK07263 pqqL; zinc protease [EC:3.4.24.-]" }, { "name":"SOIL9_49490 peptidase m16 domain-containing protein : Peptidase M16 domain protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0240 PE=3 SV=1: Peptidase_M16: Peptidase_M16_C: Peptidase_M16_C\tK07263 pqqL; zinc protease [EC:3.4.24.-]" }, { "name":"SOIL9_18450 leucyl aminopeptidase : Probable cytosol aminopeptidase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=pepA PE=3 SV=1: Peptidase_M17_N: Peptidase_M17\tK01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]" }, { "name":"SOIL9_10350 membrane dipeptidase : Membrane dipeptidase OS=Planctomyces maris DSM 8797 GN=PM8797T_23916 PE=4 SV=1: Peptidase_M19\tK01273 DPEP; membrane dipeptidase [EC:3.4.13.19]" }, { "name":"SOIL9_40620 peptidase m19 : Putative peptidase OS=Blastopirellula marina DSM 3645 GN=DSM3645_18586 PE=4 SV=1: Peptidase_M19\tK01273 DPEP; membrane dipeptidase [EC:3.4.13.19]" }, { "name":"SOIL9_72120 peptidase : Di-\/tripeptidase OS=Bradyrhizobium sp. WSM1253 GN=Bra1253DRAFT_02465 PE=4 SV=1: Peptidase_M20: M20_dimer\tK01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]" }, { "name":"SOIL9_79680 peptidase t : Peptidase T OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1386 PE=4 SV=1: Peptidase_M20: M20_dimer\tK01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]" }, { "name":"SOIL9_31580 amidohydrolase : Aminobenzoyl-glutamate utilization protein B OS=Algoriphagus machipongonensis GN=ALPR1_06240 PE=4 SV=1: Peptidase_M20: M20_dimer\tK12941 abgB; aminobenzoyl-glutamate utilization protein B" }, { "name":"SOIL9_84790 methionine aminopeptidase : Methionine aminopeptidase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=map PE=3 SV=1: Peptidase_M24\tK01265 map; methionyl aminopeptidase [EC:3.4.11.18]" }, { "name":"SOIL9_72080 aminopeptidase p : Xaa-Pro aminopeptidase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3769 PE=3 SV=1: Creatinase_N: Peptidase_M24\tK01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]" }, { "name":"SOIL9_70360 peptidase m32 : Carboxypeptidase Taq OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0595 PE=4 SV=1: Peptidase_M32\tK01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]" }, { "name":"SOIL9_07830 atp-dependent zinc metallopeptidase : AAA ATPase central domain protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2519 PE=4 SV=1: AAA\tK03798 ftsH; cell division protease FtsH [EC:3.4.24.-]" }, { "name":"SOIL9_11750 atp-dependent metalloprotease : ATP-dependent metalloprotease FtsH OS=Myxococcus stipitatus (strain DSM 14675 \/ JCM 12634 \/ Mx s8) GN=MYSTI_03370 PE=4 SV=1: AAA: Peptidase_M41\tK03798 ftsH; cell division protease FtsH [EC:3.4.24.-]" }, { "name":"SOIL9_38840 cell division protein : ATP-dependent zinc metalloprotease FtsH OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=ftsH PE=3 SV=1: FtsH_ext: AAA: Peptidase_M41\tK03798 ftsH; cell division protease FtsH [EC:3.4.24.-]" }, { "name":"SOIL9_57030 aaa atpase central domain-containing protein : Uncharacterized protein OS=Sorangium cellulosum So0157-2 GN=SCE1572_01045 PE=4 SV=1: AAA\tK03798 ftsH; cell division protease FtsH [EC:3.4.24.-]" }, { "name":"SOIL9_54700 peptidase m42 family protein : Probable endoglucanase OS=Planctomyces maris DSM 8797 GN=PM8797T_19834 PE=4 SV=1: Peptidase_M42\tK20608 tet; tetrahedral aminopeptidase [EC:3.4.11.-]" }, { "name":"SOIL9_75310 peptidase m48 ste24p : Tetratricopeptide repeat domain protein OS=uncultured planctomycete GN=HGMM_F01A04C25 PE=4 SV=1: Peptidase_M48\tK06013 STE24; STE24 endopeptidase [EC:3.4.24.84]" }, { "name":"SOIL9_72890 peptidase m50 : Peptidase M50 OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4470 PE=4 SV=1: Peptidase_M50\tK11749 rseP; regulator of sigma E protease [EC:3.4.24.-]" }, { "name":"SOIL9_02160 m50 family : Multidrug resistance efflux pump OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6853 PE=4 SV=1: Peptidase_M50\tK16922 yydH; putative peptide zinc metalloprotease protein" }, { "name":"SOIL9_13020 hypothetical protein : Uncharacterized protein OS=Desulfococcus oleovorans (strain DSM 6200 \/ Hxd3) GN=Dole_0055 PE=4 SV=1: Peptidase_M90\tK09933 mtfA; MtfA peptidase" }, { "name":"SOIL9_10890 pdz dhr glgf domain protein : PDZ\/DHR\/GLGF domain protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3926 PE=4 SV=1: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_14020 peptidase s1 and s6 chymotrypsin hap : Peptidase S1 and S6 chymotrypsin\/Hap OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1379 PE=4 SV=1: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_19300 pdz dhr glgf domain-containing protein : Trypsin-like serine protease with C-terminal PDZ domain OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5148 PE=4 SV=1: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_24480 serine protease : Serine protease OS=Azospirillum brasilense GN=ABAZ39_16055 PE=4 SV=1: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_27940 protease do : Serine protease, trypsin family OS=uncultured planctomycete GN=HGMM_F01A04C13 PE=4 SV=1: Trypsin_2: PDZ_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_42480 protease do : Protease Do OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1472 PE=4 SV=1: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_48370 peptidase s1 and s6 chymotrypsin hap : Peptidase S1 and S6 chymotrypsin\/Hap OS=Akkermansia muciniphila CAG:154 GN=BN502_00546 PE=4 SV=1: Trypsin_2: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_63250 serine protease : HtrA2 peptidase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1243 PE=4 SV=1: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_78250 unnamed protein product; BLAST_uniprot: no_hits\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_82080 serine protease : Putative periplasmic serine endoprotease DegP-like OS=alpha proteobacterium Q-1 GN=htrA PE=4 SV=1: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_28500 trypsin-like serine protease with c-terminal pdz domain : Trypsin-like serine protease with C-terminal PDZ domain OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0130 PE=4 SV=1: Asp_protease_2: PDZ_2\tK04772 degQ; serine protease DegQ [EC:3.4.21.-]" }, { "name":"SOIL9_39940 serine protease : KerA OS=Streptomyces sp. Mg1 GN=SSAG_05201 PE=4 SV=1: Peptidase_S8\tK01342 aprE; subtilisin [EC:3.4.21.62]" }, { "name":"SOIL9_75020 peptidase s8 : Peptidase S8 and S53 subtilisin kexin sedolisin OS=Shewanella woodyi (strain ATCC 51908 \/ MS32) GN=Swoo_0647 PE=3 SV=1: Peptidase_S8: P_proprotein\tK14645 K14645; serine protease [EC:3.4.21.-]" }, { "name":"SOIL9_03570 prolyl oligopeptidase : Prolyl oligopeptidase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_0450 PE=4 SV=1: Peptidase_S9_N: Peptidase_S9\tK01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]" }, { "name":"SOIL9_39700 peptidase s9 : Peptidase S9B dipeptidylpeptidase IV domain protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1654 PE=4 SV=1: Peptidase_M14: DPPIV_N: Peptidase_S9\tK01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]" }, { "name":"SOIL9_47500 peptidase s9 : Peptidase S9B dipeptidylpeptidase IV domain protein OS=Gemmatimonadetes bacterium KBS708 GN=J421_1372 PE=4 SV=1: DPPIV_N: Peptidase_S9\tK01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]" }, { "name":"SOIL9_59980 peptidase s9 : Dipeptidyl aminopeptidase OS=Microscilla marina ATCC 23134 GN=M23134_06058 PE=4 SV=1: DPPIV_N: Peptidase_S9\tK01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]" }, { "name":"SOIL9_73160 dipeptidyl peptidase iv : Gll3871 protein OS=Gloeobacter violaceus (strain PCC 7421) GN=gll3871 PE=4 SV=1: DPPIV_N: Peptidase_S9\tK01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]" }, { "name":"SOIL9_13850 protease 2 : Protease 2 OS=Chlorobium sp. GBChlB GN=HY22_04445 PE=4 SV=1: Peptidase_S9_N: Peptidase_S9\tK01354 ptrB; oligopeptidase B [EC:3.4.21.83]" }, { "name":"SOIL9_10270 d-alanyl-d-alanine carboxypeptidase : D-alanyl-D-alanine carboxypeptidase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2801 PE=3 SV=1: Peptidase_S11\tK07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5\/6) [EC:3.4.16.4]" }, { "name":"SOIL9_63270 Beta-lactamase OS=Rhodopirellula europaea SH398 GN=RESH_01866 PE=4 SV=1: Beta-lactamase\tK21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]" }, { "name":"SOIL9_40820 d-ala-d-ala carboxypeptidase : D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6651 PE=4 SV=1: Peptidase_S13\tK07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase\/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]" }, { "name":"SOIL9_55030 atp-dependent clp protease proteolytic subunit : ATP-dependent Clp protease proteolytic subunit OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=clpP PE=3 SV=1: CLP_protease\tK01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]" }, { "name":"SOIL9_55040 atp-dependent clp protease proteolytic subunit : ATP-dependent Clp protease proteolytic subunit OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=clpP PE=3 SV=1: CLP_protease\tK01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]" }, { "name":"SOIL9_01740 sos-response transcriptional : LexA repressor OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=lexA PE=3 SV=1: LexA_DNA_bind: Peptidase_S24\tK01356 lexA; repressor LexA [EC:3.4.21.88]" }, { "name":"SOIL9_16500 family transcriptional regulator : LexA repressor OS=Pseudomonas entomophila (strain L48) GN=lexA PE=3 SV=1: Peptidase_S24\tK01356 lexA; repressor LexA [EC:3.4.21.88]" }, { "name":"SOIL9_44250 family transcriptional regulator : LexA repressor OS=Thioalkalivibrio thiocyanoxidans ARh 4 GN=lexA PE=3 SV=1: LexA_DNA_bind: Peptidase_S24\tK01356 lexA; repressor LexA [EC:3.4.21.88]" }, { "name":"SOIL9_29180 carboxyl-terminal protease : Carboxyl-terminal processing protease OS=Blastopirellula marina DSM 3645 GN=DSM3645_13203 PE=3 SV=1: Peptidase_S41\tK03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]" }, { "name":"SOIL9_41800 peptidase s41 : Protease OS=uncultured planctomycete GN=HGMM_F13D05C06 PE=3 SV=1: Peptidase_S41\tK03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]" }, { "name":"SOIL9_51040 peptidase s41 : Protease OS=uncultured planctomycete GN=HGMM_F13D05C06 PE=3 SV=1: Peptidase_C14: Peptidase_S41\tK03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]" }, { "name":"SOIL9_62650 peptidase s41 : C-terminal processing peptidase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5296 PE=3 SV=1: PDZ_2: Peptidase_S41\tK03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]" }, { "name":"SOIL9_40900 protease : Uncharacterized protein OS=Odoribacter sp. CAG:788 GN=BN783_03025 PE=4 SV=1: PD40: PD40: PD40: Tricorn_C1: Tricorn_PDZ: Peptidase_S41\tK08676 tri; tricorn protease [EC:3.4.21.-]" }, { "name":"SOIL9_42470 peptidase s41 : Putative tricorn protease OS=Janthinobacterium sp. HH01 GN=Jab_1c19640 PE=4 SV=1: PD40: PD40: PD40: Tricorn_C1: Tricorn_PDZ: Peptidase_S41\tK08676 tri; tricorn protease [EC:3.4.21.-]" }, { "name":"SOIL9_79530 peptidase s41 : Peptidase S41 OS=Caldithrix abyssi DSM 13497 GN=Calab_3076 PE=4 SV=1: PD40: PD40: PD40: PD40: PD40: Tricorn_C1: PDZ_2: Peptidase_S41\tK08676 tri; tricorn protease [EC:3.4.21.-]" }, { "name":"SOIL9_57180 peptidase s45 penicillin amidase : Penicillin acylase II OS=Thermomicrobium roseum (strain ATCC 27502 \/ DSM 5159 \/ P-2) GN=trd_1119 PE=4 SV=1: Penicil_amidase\tK01434 pac; penicillin G amidase [EC:3.5.1.11]" }, { "name":"SOIL9_14040 signal peptide peptidase 36k type : Marine sediment metagenome DNA, contig: S01H1_L08541 (Fragment) OS=marine sediment metagenome GN=S01H1_19231 PE=4 SV=1: Peptidase_S49\tK04773 sppA; protease IV [EC:3.4.21.-]" }, { "name":"SOIL9_29610 signal peptidase : Periplasmic serine protease OS=Planctomyces maris DSM 8797 GN=PM8797T_20079 PE=4 SV=1: Peptidase_S49: Peptidase_S49\tK04773 sppA; protease IV [EC:3.4.21.-]" }, { "name":"SOIL9_54140 signal peptide peptidase 36k type : Signal peptide peptidase SppA, 36K type OS=Rhodopirellula sallentina SM41 GN=RSSM_04582 PE=4 SV=1: Peptidase_S49\tK04773 sppA; protease IV [EC:3.4.21.-]" }, { "name":"SOIL9_68110 cyanophycinase : Cyanophycinase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2775 PE=4 SV=1: Peptidase_S51\tK13282 cphB; cyanophycinase [EC:3.4.15.6]" }, { "name":"SOIL9_12160 rhomboid family protein : Putative membrane protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5094 PE=4 SV=1: Rhomboid\tK07059 rho2; rhomboid family protease [EC:3.4.21.105]" }, { "name":"SOIL9_32080 Putative MccF-like protein (Microcin C7 resistance) OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3561 PE=4 SV=1: Peptidase_S66\tK01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]" }, { "name":"SOIL9_24790 HK97 family phage prohead protease OS=Advenella kashmirensis (strain DSM 17095 \/ LMG 22695 \/ WT001) GN=TKWG_13310 PE=4 SV=1: Peptidase_U35\tK06904 GP4; Escherichia\/Staphylococcus phage prohead protease" }, { "name":"SOIL9_36340 Phage prohead protease, HK97 family protein OS=Pseudoxanthomonas spadix (strain BD-a59) GN=DSC_11420 PE=4 SV=1: Peptidase_U35\tK06904 GP4; Escherichia\/Staphylococcus phage prohead protease" }, { "name":"SOIL9_55520 Marine sediment metagenome DNA, contig: S01H1_L03343 (Fragment) OS=marine sediment metagenome GN=S01H1_10112 PE=4 SV=1: HTH_17: Peptidase_U35\tK06904 GP4; Escherichia\/Staphylococcus phage prohead protease" }, { "name":"SOIL9_58600 Marine sediment metagenome DNA, contig: S01H1_L03343 (Fragment) OS=marine sediment metagenome GN=S01H1_10112 PE=4 SV=1: Peptidase_U35\tK06904 GP4; Escherichia\/Staphylococcus phage prohead protease" }, { "name":"SOIL9_16040 atp-dependent protease peptidase subunit : ATP-dependent protease subunit HslV OS=Leptospira wolffii serovar Khorat str. Khorat-H2 GN=hslV PE=3 SV=1: Proteasome\tK01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]" }, { "name":"SOIL9_06720 gamma-glutamyltransferase : Gamma-glutamyltranspeptidase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2586 PE=4 SV=1: G_glu_transpept\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]" }, { "name":"SOIL9_32580 gamma-glutamyltranspeptidase : Gamma-glutamyltranspeptidase OS=Gemmatimonas aurantiaca (strain T-27 \/ DSM 14586 \/ JCM 11422 \/ NBRC 100505) GN=ggt PE=4 SV=1: G_glu_transpept\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]" }, { "name":"SOIL9_79660 peptidase u32 : Peptidase U32 OS=Paenibacillus lactis 154 GN=PaelaDRAFT_5093 PE=4 SV=1: Peptidase_U32: DUF3656: Peptidase_U32\tK08303 prtC; U32 family peptidase [EC:3.4.-.-]" }, { "name":"SOIL9_50370 protein : Protein HflC OS=Alcanivorax sp. PN-3 GN=Q668_06685 PE=3 SV=1: Band_7\tK04087 hflC; modulator of FtsH protease HflC" }, { "name":"SOIL9_50380 HflK protein OS=Desulfurispirillum indicum (strain ATCC BAA-1389 \/ S5) GN=Selin_1779 PE=4 SV=1: Band_7\tK04088 hflK; modulator of FtsH protease HflK" } ] }, { "name":"01003 Glycosyltransferases [BR:gms01003]", "children":[ { "name":"SOIL9_85590 dolichyl-phosphate beta-d-mannosyltransferase : Dolichyl-phosphate beta-D-mannosyltransferase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2484 PE=4 SV=1: Glycos_transf_2\tK00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]" }, { "name":"SOIL9_69120 tpr repeat-containing protein : TPR repeat-containing protein OS=Thioploca ingrica GN=THII_3940 PE=4 SV=1: TPR_11: TPR_11: TPR_2: TPR_11: TPR_1: Glyco_transf_41: Glyco_transf_41\tK09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]" }, { "name":"SOIL9_56550 Glycosyl transferase, group 1 family protein OS=Rhodospirillum centenum (strain ATCC 51521 \/ SW) GN=RC1_2250 PE=4 SV=1: Glycos_transf_1\tK27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase\/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]" }, { "name":"SOIL9_42560 glycogen synthase : Glycogen synthase OS=Blastopirellula marina DSM 3645 GN=glgA PE=3 SV=1: Glyco_transf_5: Glycos_transf_1\tK00703 glgA; starch synthase [EC:2.4.1.21]" }, { "name":"SOIL9_27420 glycosyl transferase : Glycosyl transferase family 28 OS=Methylobacterium extorquens (strain CM4 \/ NCIMB 13688) GN=Mchl_5544 PE=4 SV=1: Glyco_transf_28: UDPGT\tK18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-]" }, { "name":"SOIL9_77890 glycosyltransferase 36 : Cellobiose phosphorylase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1249 PE=4 SV=1: Glycoamylase: CBM_X: Glyco_transf_36: GT36_AF: CBM_X: Glyco_transf_36: GT36_AF\tK13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]" }, { "name":"SOIL9_63410 Marine sediment metagenome DNA, contig: S01H1_L00235 OS=marine sediment metagenome GN=S01H1_03843 PE=4 SV=1: Glyco_tranf_2_3\tK16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]" }, { "name":"SOIL9_50460 mgt family : Glycosyltransferase, MGT family OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_2505 PE=4 SV=1: UDPGT\tK14596 crtX; zeaxanthin glucosyltransferase [EC:2.4.1.276]" } ] }, { "name":"01005 Lipopolysaccharide biosynthesis proteins [BR:gms01005]", "children":[ { "name":"SOIL9_64970 udp-n-acetylglucosamine acyltransferase : Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3720 PE=4 SV=1: Hexapep: Hexapep: Acetyltransf_11\tK00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]" }, { "name":"SOIL9_18770 lipid-a-disaccharide synthase : Lipid-A-disaccharide synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5294 PE=4 SV=1: LpxB\tK00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]" }, { "name":"SOIL9_10000 udp-3-o-: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5597 PE=3 SV=1: LpxC\tK02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]" }, { "name":"SOIL9_27460 udp-3-o-(r-3-hydroxymyristoyl)-glucosamine n-acyltransferase : UDP-3-O-acylglucosamine N-acyltransferase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=lpxD PE=3 SV=1: LpxD: Hexapep: Hexapep: Hexapep\tK02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]" }, { "name":"SOIL9_27470 Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5300 PE=4 SV=1: DUF1009\tK09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]" }, { "name":"SOIL9_08170 tetraacyldisaccharide 4 -kinase : Tetraacyldisaccharide 4'-kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=lpxK PE=3 SV=1: LpxK\tK00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]" }, { "name":"SOIL9_74630 lipid a biosynthesis acyltransferase : Lauroyl\/myristoyl acyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5778 PE=4 SV=1: Lip_A_acyltrans\tK02517 lpxL; Kdo2-lipid IVA lauroyltransferase\/acyltransferase [EC:2.3.1.241 2.3.1.-]" }, { "name":"SOIL9_72390 Three-deoxy-D-manno-octulosonic-acid transferase domain protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4166 PE=4 SV=1: Glycos_transf_N\tK02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]" }, { "name":"SOIL9_53860 chromosome segregation protein : Uncharacterized protein OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_0196 PE=4 SV=1: PSCyt2\tK12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]" }, { "name":"SOIL9_38930 2-dehydro-3-deoxyphosphooctonate aldolase : 2-dehydro-3-deoxyphosphooctonate aldolase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=kdsA PE=3 SV=1: DAHP_synth_1\tK01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]" }, { "name":"SOIL9_54060 3-deoxy-manno-octulosonate cytidylyltransferase : 3-deoxy-manno-octulosonate cytidylyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=kdsB PE=3 SV=1: CTP_transf_3\tK00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]" }, { "name":"SOIL9_51360 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase : 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0333 PE=4 SV=1: Hydrolase_3\tK03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]" }, { "name":"SOIL9_51370 family protein : KpsF\/GutQ family protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0131 PE=4 SV=1: SIS: CBS: CBS\tK06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]" }, { "name":"SOIL9_67920 lipopolysaccharide heptosyltransferase ii : ADP-heptose:LPS heptosyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1554 PE=4 SV=1: Glyco_transf_9\tK02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]" }, { "name":"SOIL9_08150 lipopolysaccharide heptosyltransferase ii : Lipopolysaccharide heptosyltransferase II OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3093 PE=4 SV=1: Glyco_transf_9\tK02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]" }, { "name":"SOIL9_08120 Glycosyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3097 PE=4 SV=1: Glyco_transf_4: Glycos_transf_1\tK02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]" }, { "name":"SOIL9_27020 phosphoheptose isomerase : Sugar isomerase (SIS) OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1528 PE=4 SV=1: SIS_2\tK03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]" }, { "name":"SOIL9_49860 sugar isomerase : Sugar isomerase family protein OS=Candidatus Methylomirabilis oxyfera GN=DAMO_0940 PE=4 SV=1: SIS_2\tK03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]" }, { "name":"SOIL9_38290 -heptose -bisphosphate phosphatase : D,D-heptose 1,7-bisphosphate phosphatase OS=uncultured bacterium GN=ACD_47C00467G0003 PE=3 SV=1: Hydrolase_like\tK03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]" }, { "name":"SOIL9_45920 -heptose -bisphosphate phosphatase : D,D-heptose 1,7-bisphosphate phosphatase OS=Geobacter metallireducens (strain GS-15 \/ ATCC 53774 \/ DSM 7210) GN=gmhB PE=3 SV=1: Hydrolase_6: Hydrolase_like\tK03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]" }, { "name":"SOIL9_49870 d--d-heptose -bisphosphate phosphatase : D,D-heptose 1,7-bisphosphate phosphatase OS=Skermanella stibiiresistens SB22 GN=N825_01220 PE=3 SV=1: Hydrolase_like\tK03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]" }, { "name":"SOIL9_08160 adp-heptose synthase : Bifunctional protein HldE OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=hldE PE=3 SV=1: PfkB: CTP_transf_2\tK03272 gmhC; D-beta-D-heptose 7-phosphate kinase \/ D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]" }, { "name":"SOIL9_08050 adp-l-glycero-d-manno-heptose-6-epimerase : ADP-L-glycero-D-manno-heptose-6-epimerase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4927 PE=4 SV=1: Epimerase\tK03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]" } ] }, { "name":"01011 Peptidoglycan biosynthesis and degradation proteins [BR:gms01011]", "children":[ { "name":"SOIL9_21820 udp-n-acetylenolpyruvoylglucosamine reductase : UDP-N-acetylenolpyruvoylglucosamine reductase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=murB PE=3 SV=1: FAD_binding_4: MurB_C\tK00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]" }, { "name":"SOIL9_21150 d-alanine--d-alanine ligase : D-alanine--D-alanine ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6203 PE=4 SV=1: Dala_Dala_lig_C\tK01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]" }, { "name":"SOIL9_31470 d-alanine--d-alanine ligase : D-alanine--D-alanine ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6202 PE=4 SV=1: Dala_Dala_lig_C\tK01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]" }, { "name":"SOIL9_32080 Putative MccF-like protein (Microcin C7 resistance) OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3561 PE=4 SV=1: Peptidase_S66\tK01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]" }, { "name":"SOIL9_69400 udp pyrophosphate phosphatase : Undecaprenyl-diphosphatase OS=Chlorobium phaeobacteroides (strain BS1) GN=uppP PE=3 SV=1: BacA\tK06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]" }, { "name":"SOIL9_10270 d-alanyl-d-alanine carboxypeptidase : D-alanyl-D-alanine carboxypeptidase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2801 PE=3 SV=1: Peptidase_S11\tK07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5\/6) [EC:3.4.16.4]" }, { "name":"SOIL9_40820 d-ala-d-ala carboxypeptidase : D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6651 PE=4 SV=1: Peptidase_S13\tK07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase\/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]" }, { "name":"SOIL9_63270 Beta-lactamase OS=Rhodopirellula europaea SH398 GN=RESH_01866 PE=4 SV=1: Beta-lactamase\tK21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]" }, { "name":"SOIL9_32090 Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0066 PE=4 SV=1: Peptidase_M15_4\tK17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]" }, { "name":"SOIL9_85640 n-acetylmuramoyl-l-alanine amidase : N-acetylmuramoyl-L-alanine amidase OS=Clostridium sp. CAG:451 GN=BN663_00049 PE=4 SV=1: Amidase_3\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SOIL9_17430 unnamed protein product; BLAST_uniprot: no_hits\tK06078 lpp; murein lipoprotein" } ] }, { "name":"01004 Lipid biosynthesis proteins [BR:gms01004]", "children":[ { "name":"SOIL9_62320 malonyl -acyl carrier protein transacylase : Malonyl CoA-acyl carrier protein transacylase OS=uncultured Acidobacteria bacterium A2 PE=3 SV=1: Acyl_transf_1\tK00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]" }, { "name":"SOIL9_17540 3-oxoacyl-acp synthase : 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=fabH PE=3 SV=1: ACP_syn_III: ACP_syn_III_C\tK00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]" }, { "name":"SOIL9_75360 3-oxoacyl-acp synthase : 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Clostridium sordellii GN=fabH PE=4 SV=1: ACP_syn_III: ACP_syn_III_C\tK00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]" }, { "name":"SOIL9_83850 3-oxoacyl-acp synthase : 3-oxoacyl-ACP synthase OS=Chlorobium sp. GBChlB GN=HY22_03720 PE=4 SV=1: ACP_syn_III: ACP_syn_III_C\tK00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]" }, { "name":"SOIL9_12770 3-oxoacyl-acp synthase : 3-oxoacyl-(Acyl-carrier-protein) synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1387 PE=3 SV=1: ketoacyl-synt: Ketoacyl-synt_C\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"SOIL9_55330 3-oxoacyl-acp synthase : 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3120 PE=3 SV=1: ketoacyl-synt: Ketoacyl-synt_C\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"SOIL9_55340 3-oxoacyl-acp synthase : 3-oxoacyl-(Acyl carrier protein) synthase OS=Planctomyces maris DSM 8797 GN=PM8797T_28459 PE=3 SV=1: ketoacyl-synt: Ketoacyl-synt_C\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"SOIL9_62300 3-oxoacyl-acp synthase : 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=uncultured Acidobacteria bacterium A2 PE=3 SV=1: ketoacyl-synt: Ketoacyl-synt_C\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"SOIL9_72150 3-oxoacyl-acp synthase : 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3120 PE=3 SV=1: ketoacyl-synt: Ketoacyl-synt_C\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"SOIL9_72160 3-oxoacyl-acp synthase : 3-oxoacyl-(Acyl carrier protein) synthase OS=Planctomyces maris DSM 8797 GN=PM8797T_28459 PE=3 SV=1: ketoacyl-synt: Ketoacyl-synt_C\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"SOIL9_04740 3-ketoacyl-acp reductase : Short-chain dehydrogenase\/reductase SDR OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_5617 PE=3 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_06020 3-oxoacyl-acp reductase : Short-chain dehydrogenase\/reductase SDR OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_6588 PE=3 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_09470 short-chain dehydrogenase reductase sdr : Short-chain dehydrogenase\/reductase SDR OS=Pseudomonas viridiflava UASWS0038 GN=AAI_04629 PE=3 SV=1: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_12530 oxidoreductase : Short-chain dehydrogenase OS=Bradyrhizobium japonicum SEMIA 5079 GN=BJS_02062 PE=4 SV=1: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_12540 oxidoreductase : Oxidoreductase OS=Calothrix sp. 336\/3 GN=IJ00_10970 PE=3 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_24270 3-ketoacyl-acp reductase : 3-oxoacyl-[acyl-carrier-protein] reductase protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_05944 PE=3 SV=1: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_32060 oxidoreductase : 3-oxoacyl-(Acyl-carrier-protein) reductase OS=Granulicella mallensis (strain ATCC BAA-1857 \/ DSM 23137 \/ MP5ACTX8) GN=AciX8_0105 PE=4 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_35470 oxidoreductase : Oxidoreductase OS=Burkholderia grimmiae GN=BG57_27380 PE=4 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_72190 3-oxoacyl-(acyl-carrier-protein) reductase : 3-oxoacyl-(Acyl-carrier protein) reductase OS=Planctomyces maris DSM 8797 GN=PM8797T_12848 PE=3 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_75490 3-oxoacyl-acp reductase : Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1242 PE=4 SV=1: HPPK: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_77780 oxidoreductase : Putative short-chain dehydrogenase OS=Planctomyces maris DSM 8797 GN=PM8797T_09224 PE=3 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_79360 short-chain dehydrogenase : 3-oxoacyl-(Acyl-carrier-protein) reductase OS=Runella slithyformis (strain ATCC 29530 \/ DSM 19594 \/ LMG 11500 \/ NCIMB 11436 \/ LSU 4) GN=Runsl_1409 PE=4 SV=1: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_79600 short-chain dehydrogenase : Short chain dehydrogenase family protein OS=Mesorhizobium huakuii 7653R GN=fabG20 PE=3 SV=1: adh_short_C2\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_81440 oxidoreductase : Oxidoreductase OS=Burkholderia grimmiae GN=BG57_27380 PE=4 SV=1: adh_short\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SOIL9_24370 Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabA\/FabZ OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0858 PE=4 SV=1: FabA\tK02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]" }, { "name":"SOIL9_72170 Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabA\/FabZ OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3121 PE=4 SV=1: FabA\tK02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]" }, { "name":"SOIL9_72200 hydroxymyristoyl-acp dehydratase : Marine sediment metagenome DNA, contig: S06H3_S02804 OS=marine sediment metagenome GN=S06H3_29562 PE=4 SV=1: FabA\tK02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]" }, { "name":"SOIL9_50820 enoyl-: Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02448 PE=4 SV=1: adh_short_C2\tK00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]" }, { "name":"SOIL9_63980 Thioesterase superfamily protein OS=Rhodopirellula maiorica SM1 GN=RMSM_04703 PE=4 SV=1: 4HBT\tK10806 yciA; acyl-CoA thioesterase [EC:3.1.2.-]" }, { "name":"SOIL9_22900 delta 9 acyl-lipid fatty acid desaturase : Fatty acid desaturase OS=Salinisphaera hydrothermalis C41B8 GN=C41B8_13055 PE=4 SV=1: FA_desaturase\tK00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]" }, { "name":"SOIL9_31070 stearoyl-9-desaturase : Stearoyl-CoA 9-desaturase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3878 PE=4 SV=1: FA_desaturase\tK00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]" }, { "name":"SOIL9_81250 stearoyl-9-desaturase : Stearoyl-CoA 9-desaturase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3878 PE=4 SV=1: FA_desaturase\tK00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]" }, { "name":"SOIL9_83110 delta 9 acyl-lipid fatty acid desaturase : Fatty acid desaturase OS=Salinisphaera hydrothermalis C41B8 GN=C41B8_13055 PE=4 SV=1: FA_desaturase\tK00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]" }, { "name":"SOIL9_83800 stearoyl-9-desaturase : Stearoyl-CoA 9-desaturase OS=Leptospira wolbachii serovar Codice str. CDC GN=LEP1GSC195_3118 PE=4 SV=1: FA_desaturase\tK00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]" }, { "name":"SOIL9_22420 acyl-acp desaturase : Acyl-ACP desaturase OS=Sorangium cellulosum So0157-2 GN=SCE1572_15120 PE=4 SV=1: FA_desaturase_2\tK03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]" }, { "name":"SOIL9_55350 acyl-acp partial : Fatty acid desaturase, type 2 OS=Cystobacter fuscus DSM 2262 GN=D187_006472 PE=4 SV=1: FA_desaturase_2\tK03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]" }, { "name":"SOIL9_38680 acetyl-coenzyme a synthetase : Acetyl-coenzyme A synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=acsA PE=3 SV=1: AMP-binding: AMP-binding_C\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]" }, { "name":"SOIL9_21190 amp-binding protein : AMP-dependent synthetase and ligase OS=Sphaerobacter thermophilus (strain DSM 20745 \/ S 6022) GN=Sthe_0360 PE=4 SV=1: AMP-binding: AMP-binding_C\tK00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]" }, { "name":"SOIL9_84190 phosphate acyltransferase : Phosphate acyltransferase OS=uncultured Acidobacteria bacterium A2 GN=plsX PE=3 SV=1: FA_synthesis\tK03621 plsX; phosphate acyltransferase [EC:2.3.1.274]" }, { "name":"SOIL9_07600 glycerol-3-phosphate acyltransferase : Glycerol-3-phosphate acyltransferase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=plsY PE=3 SV=1: G3P_acyltransf: DUF4149\tK08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]" }, { "name":"SOIL9_29830 1-acyl-sn-glycerol-3-phosphate acyltransferase : 1-acyl-sn-glycerol-3-phosphate acyltransferase OS=uncultured planctomycete GN=HGMM_F09D09C25 PE=4 SV=1: Acyltransferase\tK00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]" } ] }, { "name":"01008 Polyketide biosynthesis proteins [BR:gms01008]", "children":[ { "name":"SOIL9_84870 2-nitropropane dioxygenase : 2-nitropropane dioxygenase, NPD OS=bacterium UASB270 GN=U27_00265 PE=4 SV=1: NMO\tK15329 pksE; trans-AT polyketide synthase, acyltransferase and oxidoreductase domains" }, { "name":"SOIL9_20870 Putative halogenase OS=Planctomyces maris DSM 8797 GN=PM8797T_27025 PE=4 SV=1\tK14257 ctcP; tetracycline 7-halogenase \/ FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-]" }, { "name":"SOIL9_13590 Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_22088 PE=4 SV=1: VCBS: VCBS: UnbV_ASPIC\tK21162 sgcE4; enediyne biosynthesis protein E4" }, { "name":"SOIL9_20850 ASPIC and UnbV.\/Family description OS=Chthonomonas calidirosea (strain DSM 23976 \/ ICMP 18418 \/ T49) GN=CCALI_01314 PE=4 SV=1: VCBS: VCBS: UnbV_ASPIC\tK21162 sgcE4; enediyne biosynthesis protein E4" }, { "name":"SOIL9_20840 Uncharacterized protein OS=Chthonomonas calidirosea (strain DSM 23976 \/ ICMP 18418 \/ T49) GN=CCALI_01313 PE=4 SV=1: NQR2_RnfD_RnfE\tK21163 sgcE5; enediyne biosynthesis protein E5" }, { "name":"SOIL9_20600 aminotransferase class v : Isopenicillin N epimerase OS=Amycolatopsis lactamdurans GN=cefD PE=3 SV=1: Aminotran_5: Aminotran_5\tK04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17]" } ] }, { "name":"01006 Prenyltransferases [BR:gms01006]", "children":[ { "name":"SOIL9_66110 farnesyl-diphosphate synthase : Polyprenyl synthetase OS=Planctomyces maris DSM 8797 GN=PM8797T_17514 PE=3 SV=1: polyprenyl_synt\tK13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]" }, { "name":"SOIL9_55000 polyprenyl synthetase : Polyprenyl synthetase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3133 PE=3 SV=1: polyprenyl_synt\tK02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]" }, { "name":"SOIL9_40790 udp pyrophosphate synthase : Isoprenyl transferase OS=Blastopirellula marina DSM 3645 GN=DSM3645_07730 PE=3 SV=1: Prenyltransf\tK00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]" }, { "name":"SOIL9_76020 phytoene synthase : Phytoene\/squalene synthetase OS=Chthonomonas calidirosea (strain DSM 23976 \/ ICMP 18418 \/ T49) GN=CCALI_01286 PE=4 SV=1: SQS_PSY\tK02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]" }, { "name":"SOIL9_07170 trna delta -isopentenylpyrophosphate transferase : tRNA dimethylallyltransferase OS=Planctomyces maris DSM 8797 GN=miaA PE=3 SV=1: IPPT\tK00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]" }, { "name":"SOIL9_65410 4-hydroxybenzoate polyprenyltransferase : 4-hydroxybenzoate octaprenyltransferase OS=Blastopirellula marina DSM 3645 GN=DSM3645_22029 PE=4 SV=1: UbiA\tK03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]" }, { "name":"SOIL9_53560 protoheme ix farnesyltransferase : Protoheme IX farnesyltransferase OS=Solibacter usitatus (strain Ellin6076) GN=ctaB PE=3 SV=1: UbiA\tK02257 COX10; heme o synthase [EC:2.5.1.141]" } ] }, { "name":"01007 Amino acid related enzymes [BR:gms01007]", "children":[ { "name":"SOIL9_05650 glutamyl-q trna ligase : Glutamyl-or glutaminyl-tRNA synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1159 PE=3 SV=1: tRNA-synt_1c\tK01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]" }, { "name":"SOIL9_40100 tyrosyl-trna synthetase : Tyrosine--tRNA ligase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_2772 PE=4 SV=1: tRNA-synt_1b\tK01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]" }, { "name":"SOIL9_20440 tryptophanyl-trna synthetase : Tryptophan--tRNA ligase OS=Ilyobacter polytropus (strain DSM 2926 \/ CuHBu1) GN=trpS PE=3 SV=1: tRNA-synt_1b\tK01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]" }, { "name":"SOIL9_69860 cysteinyl-trna synthetase : Cysteine--tRNA ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=cysS PE=3 SV=1: tRNA-synt_1e: DALR_2\tK01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]" }, { "name":"SOIL9_06530 arginyl-trna synthetase : Arginine--tRNA ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=argS PE=3 SV=1: Arg_tRNA_synt_N: tRNA-synt_1d: DALR_1\tK01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]" }, { "name":"SOIL9_46920 methionyl-trna synthetase : Methionine--tRNA ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=metG PE=3 SV=1: tRNA-synt_1g: Anticodon_1\tK01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]" }, { "name":"SOIL9_76630 isoleucyl-trna synthetase : Isoleucine--tRNA ligase OS=uncultured Acidobacteria bacterium A2 PE=4 SV=1: tRNA-synt_1: tRNA-synt_1: Anticodon_1\tK01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]" }, { "name":"SOIL9_12010 valyl-trna synthetase : Valine--tRNA ligase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=valS PE=3 SV=1: tRNA-synt_1: Anticodon_1: Val_tRNA-synt_C\tK01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]" }, { "name":"SOIL9_23170 leucyl-trna synthetase : Leucine--tRNA ligase OS=uncultured planctomycete GN=leuS PE=3 SV=1: tRNA-synt_1: tRNA-synt_1_2: tRNA-synt_1: Anticodon_1\tK01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]" }, { "name":"SOIL9_07220 lysyl-trna synthetase : Lysine--tRNA ligase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=lysS PE=3 SV=1: tRNA_anti-codon: tRNA-synt_2\tK04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]" }, { "name":"SOIL9_17020 aspartyl-trna synthetase : Aspartate--tRNA(Asp\/Asn) ligase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=aspS PE=3 SV=1: tRNA_anti-codon: tRNA-synt_2: GAD\tK01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]" }, { "name":"SOIL9_23590 asparaginyl-trna synthetase : Asparagine--tRNA ligase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=asnS PE=3 SV=1: tRNA_anti-codon: tRNA-synt_2\tK01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]" }, { "name":"SOIL9_54580 histidyl-trna synthetase : Histidine--tRNA ligase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=hisS PE=3 SV=1: tRNA-synt_His: HGTP_anticodon\tK01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]" }, { "name":"SOIL9_46420 glycyl-trna synthetase : Glycine--tRNA ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=glyQS PE=3 SV=1: tRNA-synt_2b: HGTP_anticodon\tK01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]" }, { "name":"SOIL9_31460 seryl-trna synthetase : Serine--tRNA ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=serS PE=3 SV=1: Seryl_tRNA_N: tRNA-synt_2b\tK01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]" }, { "name":"SOIL9_83590 prolyl-trna synthetase : Proline--tRNA ligase OS=Dysgonomonas gadei ATCC BAA-286 GN=proS PE=3 SV=1: tRNA-synt_2b: HGTP_anticodon: ProRS-C_1\tK01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]" }, { "name":"SOIL9_29120 threonyl-trna synthetase : Threonine--tRNA ligase OS=Herpetosiphon aurantiacus (strain ATCC 23779 \/ DSM 785) GN=thrS PE=3 SV=1: tRNA_SAD: tRNA-synt_2b: HGTP_anticodon\tK01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]" }, { "name":"SOIL9_62840 alanyl-trna synthetase : Alanine--tRNA ligase OS=Malassezia globosa (strain ATCC MYA-4612 \/ CBS 7966) GN=ALA1 PE=3 SV=1: tRNA-synt_2c: tRNA_SAD: DHHA1\tK01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]" }, { "name":"SOIL9_67900 phenylalanyl-trna synthetase subunit alpha : Phenylalanine--tRNA ligase alpha subunit OS=Roseiflexus sp. (strain RS-1) GN=pheS PE=3 SV=1: Phe_tRNA-synt_N: tRNA-synt_2d\tK01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]" }, { "name":"SOIL9_42840 phenylalanyl-trna synthetase subunit beta : Phenylalanine--tRNA ligase beta subunit OS=Anaerolinea thermophila (strain DSM 14523 \/ JCM 11388 \/ NBRC 100420 \/ UNI-1) GN=pheT PE=3 SV=1: tRNA_bind: B3_4: B5: FDX-ACB\tK01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]" }, { "name":"SOIL9_21630 aspartate aminotransferase : Aspartate aminotransferase OS=uncultured planctomycete GN=HGMM_F11G08C24 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_51030 aspartate aminotransferase : Aspartate\/tyrosine\/aromatic aminotransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3297 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_69580 aspartate aminotransferase : Aminotransferase, class I and II OS=Planctomyces maris DSM 8797 GN=PM8797T_14147 PE=3 SV=1: Aminotran_1_2\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SOIL9_66820 aspartate aminotransferase : Aspartate aminotransferase OS=Rhodopirellula maiorica SM1 GN=RMSM_00332 PE=4 SV=1: Aminotran_1_2\tK10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]" }, { "name":"SOIL9_39970 aspartate tyrosine aromatic aminotransferase : Aromatic amino acid aminotransferase OS=Desulfosporosinus sp. HMP52 GN=DP73_21835 PE=4 SV=1: Aminotran_1_2\tK10907 K10907; aminotransferase [EC:2.6.1.-]" }, { "name":"SOIL9_37540 histidinol-phosphate aminotransferase : Histidinol-phosphate aminotransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=hisC PE=3 SV=1: Aminotran_1_2\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"SOIL9_62790 2-amino-3-ketobutyrate ligase : 2-amino-3-ketobutyrate coenzyme A ligase OS=Microscilla marina ATCC 23134 GN=M23134_03502 PE=3 SV=1: Aminotran_1_2\tK00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]" }, { "name":"SOIL9_21890 acetylornithine aminotransferase : Acetylornithine aminotransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=argD PE=3 SV=1: Aminotran_3\tK00821 argD; acetylornithine\/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]" }, { "name":"SOIL9_27560 4-aminobutyrate aminotransferase : 4-aminobutyrate aminotransferase OS=Planctomyces maris DSM 8797 GN=PM8797T_18644 PE=3 SV=1: Aminotran_3\tK07250 gabT; 4-aminobutyrate aminotransferase \/ (S)-3-amino-2-methylpropionate transaminase \/ 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]" }, { "name":"SOIL9_82970 4-aminobutyrate aminotransferase : Acetylornithine aminotransferase OS=uncultured planctomycete GN=argD PE=3 SV=1: Aminotran_3\tK00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]" }, { "name":"SOIL9_17110 glutamate-1-semialdehyde aminotransferase : Glutamate-1-semialdehyde 2,1-aminomutase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=hemL PE=3 SV=1: Aminotran_3\tK01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]" }, { "name":"SOIL9_31160 glutamate-1-semialdehyde -aminomutase : Glutamate-1-semialdehyde 2,1-aminomutase, putative OS=Planctomyces maris DSM 8797 GN=PM8797T_22388 PE=3 SV=1: Aminotran_3\tK01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]" }, { "name":"SOIL9_54460 branched-chain amino acid aminotransferase : Branched chain amino acid aminotransferase apoenzyme OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_2136 PE=3 SV=1: Aminotran_4\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"SOIL9_68000 branched-chain amino acid aminotransferase : Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase \/ branched chain amino acid aminotransferase OS=Rhodospirillum photometricum DSM 122 GN=RSPPHO_02087 PE=3 SV=1: Aminotran_4\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"SOIL9_42310 alanine--glyoxylate aminotransferase : Aminotransferase, class V OS=Planctomyces maris DSM 8797 GN=PM8797T_18841 PE=3 SV=1: Aminotran_5\tK00830 AGXT; alanine-glyoxylate transaminase \/ serine-glyoxylate transaminase \/ serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]" } ] }, { "name":"00199 Cytochrome P450" }, { "name":"00194 Photosynthesis proteins [BR:gms00194]", "children":[ { "name":"SOIL9_62540 4fe-4s ferredoxin : Uncharacterized protein OS=Thalassotalea sp. ND16A GN=ND16A_1220 PE=4 SV=1: Fer4_7\tK02691 psaC; photosystem I iron-sulfur center [EC:1.97.1.12]" }, { "name":"SOIL9_22910 atp synthase epsilon subunit : ATP synthase epsilon chain OS=Rhodopirellula maiorica SM1 GN=atpC PE=3 SV=1: ATP-synt_DE_N\tK02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon" }, { "name":"SOIL9_22920 f0f1 atp synthase subunit beta : ATP synthase subunit beta OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=atpD PE=3 SV=1: ATP-synt_ab_N: ATP-synt_ab: ATP-synt_ab_C\tK02112 ATPF1B; F-type H+\/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]" }, { "name":"SOIL9_22940 atp synthase gamma subunit : ATP synthase gamma chain OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=atpG PE=3 SV=1: ATP-synt\tK02115 ATPF1G; F-type H+-transporting ATPase subunit gamma" }, { "name":"SOIL9_22960 atp synthase subunit alpha : ATP synthase subunit alpha OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=atpA PE=3 SV=1: ATP-synt_ab_N: ATP-synt_ab: ATP-synt_ab: ATP-synt_ab_C\tK02111 ATPF1A; F-type H+\/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]" }, { "name":"SOIL9_22970 atp synthase subunit delta : ATP synthase subunit delta OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=atpH PE=3 SV=1: OSCP\tK02113 ATPF1D; F-type H+-transporting ATPase subunit delta" }, { "name":"SOIL9_22980 atp synthase f0 subunit b : ATP synthase subunit b OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=atpF PE=3 SV=1: ATP-synt_B\tK02109 ATPF0B; F-type H+-transporting ATPase subunit b" }, { "name":"SOIL9_22990 atp synthase f0 c subunit : Putative ATP synthase C subunit OS=uncultured bacterium CBNPD1 BAC clone 543 PE=3 SV=1: ATP-synt_C\tK02110 ATPF0C; F-type H+-transporting ATPase subunit c" }, { "name":"SOIL9_23000 atp synthase subunit a : ATP synthase subunit a OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=atpB PE=3 SV=1: ATP-synt_A\tK02108 ATPF0A; F-type H+-transporting ATPase subunit a" }, { "name":"SOIL9_77130 unnamed protein product; BLAST_uniprot: no_hits\tK02116 atpI; ATP synthase protein I" } ] } ] }, { "name":"09182 Protein families: genetic information processing", "children":[ { "name":"03000 Transcription factors [BR:gms03000]", "children":[ { "name":"SOIL9_54940 family transcriptional regulator : Transcriptional regulator, AraC family OS=Ktedonobacter racemifer DSM 44963 GN=Krac_3207 PE=4 SV=1: HTH_18: DNA_binding_1\tK10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response \/ methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]" }, { "name":"SOIL9_84010 family transcriptional regulator : Transcriptional regulators-like protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4678 PE=4 SV=1: GntR: Peripla_BP_3\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor" }, { "name":"SOIL9_02870 family transcriptional regulator : Transcriptional regulator OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2539 PE=4 SV=1: TetR_N\tK16137 nemR; TetR\/AcrR family transcriptional regulator, transcriptional repressor for nem operon" }, { "name":"SOIL9_03240 family transcriptional regulator : Transcriptional regulator, TetR family OS=Azoarcus sp. KH32C GN=AZKH_1730 PE=4 SV=1: TetR_N\tK16137 nemR; TetR\/AcrR family transcriptional regulator, transcriptional repressor for nem operon" }, { "name":"SOIL9_25810 family transcriptional regulator : Transcriptional regulator, MarR family OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_0585 PE=4 SV=1: MarR\tK22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator" }, { "name":"SOIL9_48150 family transcriptional regulator : Regulatory protein MarR OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0707 PE=4 SV=1: MarR\tK22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator" }, { "name":"SOIL9_06580 family transcriptional regulator : MerR family transcriptional regulator OS=Candidatus Entotheonella sp. TSY2 GN=ETSY2_48225 PE=4 SV=1: MerR: MerR-DNA-bind\tK19591 cueR; MerR family transcriptional regulator, copper efflux regulator" }, { "name":"SOIL9_66750 fur family transcriptional regulator : Fe2+\/Zn2+ uptake regulation protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1138 PE=4 SV=1: FUR\tK03711 fur; Fur family transcriptional regulator, ferric uptake regulator" }, { "name":"SOIL9_50300 Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_16655 PE=4 SV=1: Rrf2\tK13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor" }, { "name":"SOIL9_62460 Transcriptional regulator, BadM\/Rrf2 family OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_0335 PE=4 SV=1: Rrf2\tK17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor" }, { "name":"SOIL9_12180 family transcriptional regulator : Transcriptional regulator, ArsR family OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1414 PE=4 SV=1: HTH_20\tK21886 nmtR; ArsR family transcriptional regulator, nickel\/cobalt-responsive transcriptional repressor" }, { "name":"SOIL9_57480 family transcriptional regulator : Putative ArsR family transcriptional regulator OS=Caldilinea aerophila (strain DSM 14535 \/ JCM 11387 \/ NBRC 104270 \/ STL-6-O1) GN=CLDAP_21180 PE=4 SV=1: HTH_20\tK21886 nmtR; ArsR family transcriptional regulator, nickel\/cobalt-responsive transcriptional repressor" }, { "name":"SOIL9_67120 family transcriptional regulator : Transcriptional regulator, ArsR family OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1414 PE=4 SV=1: HTH_20\tK21886 nmtR; ArsR family transcriptional regulator, nickel\/cobalt-responsive transcriptional repressor" }, { "name":"SOIL9_68820 family transcriptional regulator : Sulfurtransferase OS=Mesorhizobium plurifarium GN=MPL3365_70597 PE=4 SV=1: HTH_20\tK21886 nmtR; ArsR family transcriptional regulator, nickel\/cobalt-responsive transcriptional repressor" }, { "name":"SOIL9_25100 family transcriptional regulator : ArsR family transcriptional regulator OS=Comamonas testosteroni GN=P245_27905 PE=4 SV=1: HTH_20\tK21903 cadC; ArsR family transcriptional regulator, lead\/cadmium\/zinc\/bismuth-responsive transcriptional repressor" }, { "name":"SOIL9_78460 transcriptional regulator : Probable transcription regulator OS=Planctomyces maris DSM 8797 GN=PM8797T_22538 PE=4 SV=1: HTH_20\tK21903 cadC; ArsR family transcriptional regulator, lead\/cadmium\/zinc\/bismuth-responsive transcriptional repressor" }, { "name":"SOIL9_73620 Transcriptional regulator, PadR-like family OS=Conexibacter woesei (strain DSM 14684 \/ JCM 11494 \/ NBRC 100937 \/ ID131577) GN=Cwoe_1974 PE=4 SV=1: PadR\tK10947 K10947; PadR family transcriptional regulator" }, { "name":"SOIL9_18780 iron dependent repressor : Iron dependent repressor OS=Halosarcina pallida JCM 14848 GN=C474_16834 PE=4 SV=1: Fe_dep_repress: Fe_dep_repr_C: FeoA\tK03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator" }, { "name":"SOIL9_15440 transcriptional regulator : Putative transcriptional regulator OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1395 PE=4 SV=1: Penicillinase_R\tK02171 blaI; BlaI family transcriptional regulator, penicillinase repressor" }, { "name":"SOIL9_35030 penicillinase repressor : Probable Penicillinase repressor OS=Planctomyces maris DSM 8797 GN=PM8797T_09109 PE=4 SV=1: Penicillinase_R\tK02171 blaI; BlaI family transcriptional regulator, penicillinase repressor" }, { "name":"SOIL9_41640 transcriptional regulator : Transcriptional repressor, CopY family OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_3893 PE=4 SV=1: Penicillinase_R\tK02171 blaI; BlaI family transcriptional regulator, penicillinase repressor" }, { "name":"SOIL9_73910 family transcriptional regulator : Transcriptional repressor CopY OS=Sorangium cellulosum (strain So ce56) GN=sce6610 PE=4 SV=1: Penicillinase_R: DDE_Tnp_IS1595\tK02171 blaI; BlaI family transcriptional regulator, penicillinase repressor" }, { "name":"SOIL9_29200 biotin--acetyl--carboxylase ligase : Biotin--acetyl-CoA-carboxylase ligase OS=Listeriaceae bacterium FSL A5-0281 GN=EP57_08620 PE=4 SV=1: BPL_LplA_LipB\tK03524 birA; BirA family transcriptional regulator, biotin operon repressor \/ biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]" }, { "name":"SOIL9_10240 transcriptional fis family : Sigma-54 factor interaction domain-containing protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2667 PE=4 SV=1: GAF_2: Sigma54_activat: HTH_8\tK15836 fhlA; formate hydrogenlyase transcriptional activator" }, { "name":"SOIL9_31950 formate hydrogenlyase transcriptional activator : Formate hydrogenlyase transcriptional activator OS=Candidatus Nitrospira defluvii GN=fhlA PE=4 SV=1: Sigma54_activat: HTH_8\tK15836 fhlA; formate hydrogenlyase transcriptional activator" }, { "name":"SOIL9_48020 fis family transcriptional regulator : Formate hydrogenlyase transcriptional activator OS=Methyloglobulus morosus KoM1 GN=fhlA PE=4 SV=1: GAF: PAS_9: Sigma54_activat: HTH_8\tK15836 fhlA; formate hydrogenlyase transcriptional activator" }, { "name":"SOIL9_02020 family transcriptional regulator : Putative transcriptional regulator, ModE family protein OS=Leeuwenhoekiella blandensis (strain CECT 7118 \/ CCUG 51940 \/ MED217) GN=MED217_08760 PE=4 SV=1: HTH_1\tK02019 modE; molybdate transport system regulatory protein" }, { "name":"SOIL9_21470 redox-sensing transcriptional repressor rex : Redox-sensing transcriptional repressor Rex OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rex PE=3 SV=1: Put_DNA-bind_N: CoA_binding\tK01926 rex; redox-sensing transcriptional repressor" }, { "name":"SOIL9_50480 nad+ synthetase : Putative nickel-responsive regulator OS=Thermoplasmatales archaeon SCGC AB-539-C06 GN=MBGDC06_00609 PE=3 SV=1: RHH_1: NikR_C\tK07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator" }, { "name":"SOIL9_57740 1-pyrroline-5-carboxylate dehydrogenase : 1-pyrroline-5 carboxylate dehydrogenase OS=Planctomyces maris DSM 8797 GN=PM8797T_17322 PE=3 SV=1: Pro_dh: Aldedh\tK13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor \/ proline dehydrogenase \/ delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]" }, { "name":"SOIL9_78700 Uncharacterized protein OS=Rhodopirellula baltica SWK14 GN=RBSWK_00735 PE=4 SV=1\tK18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator" }, { "name":"SOIL9_42960 ParBc, ParB-like nuclease domain OS=Blastopirellula marina DSM 3645 GN=DSM3645_27843 PE=4 SV=1: ParBc\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"SOIL9_48260 chromosome partitioning protein : ParBc, ParB-like nuclease domain OS=Blastopirellula marina DSM 3645 GN=DSM3645_27843 PE=4 SV=1: ParBc\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"SOIL9_60400 chromosome partitioning protein : ParBc, ParB-like nuclease domain OS=Symbiobacterium thermophilum (strain T \/ IAM 14863) GN=STH3332 PE=4 SV=1: ParBc\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"SOIL9_69650 parb-like partition protein : ParB-like partition protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1718 PE=4 SV=1: ParBc\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"SOIL9_81950 chromosome partitioning protein : ParB-like partition protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7661 PE=4 SV=1: ParBc\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"SOIL9_58590 : HTH_17\tK07733 alpA; prophage regulatory protein" }, { "name":"SOIL9_58640 unnamed protein product; BLAST_uniprot: no_hits\tK07733 alpA; prophage regulatory protein" }, { "name":"SOIL9_55270 transcriptional regulator : Transcriptional regulator OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7182 PE=4 SV=1: FMN_bind_2\tK07734 paiB; transcriptional regulator" }, { "name":"SOIL9_28370 transcriptional regulator : DnaK suppressor protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6088 PE=4 SV=1: zf-dskA_traR\tK06204 dksA; RNA polymerase-binding transcription factor" } ] }, { "name":"03021 Transcription machinery [BR:gms03021]", "children":[ { "name":"SOIL9_63810 type iii restriction protein res subunit : DNA\/RNA helicase, superfamily II OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6347 PE=4 SV=1: Helicase_C_3: ResIII: Helicase_C\tK10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]" }, { "name":"SOIL9_50350 rna polymerase alpha subunit domain protein : DNA-directed RNA polymerase subunit alpha (Fragment) OS=uncultured planctomycete GN=HGMM_F13D05C26 PE=4 SV=1: TPR_11: TPR_2: RNA_pol_A_CTD: RNA_pol_A_CTD\tK03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]" }, { "name":"SOIL9_84830 dna-directed rna polymerase subunit alpha : DNA-directed RNA polymerase subunit alpha OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rpoA PE=3 SV=1: RNA_pol_L: RNA_pol_A_bac: RNA_pol_A_CTD\tK03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]" }, { "name":"SOIL9_11240 dna-directed rna polymerase subunit beta : DNA-directed RNA polymerase subunit beta OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rpoB PE=3 SV=1: RNA_pol_Rpb2_1: RNA_pol_Rpb2_2: RNA_pol_Rpb2_3: RNA_pol_Rpb2_45: RNA_pol_Rpb2_6: RNA_pol_Rpb2_7\tK03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]" }, { "name":"SOIL9_11250 dna-directed rna polymerase subunit beta : DNA-directed RNA polymerase subunit beta' OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rpoC PE=3 SV=1: RNA_pol_Rpb1_1: RNA_pol_Rpb1_2: RNA_pol_Rpb1_3: RNA_pol_Rpb1_4: RNA_pol_Rpb1_5\tK03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]" }, { "name":"SOIL9_59760 dna-directed rna polymerase subunit omega : DNA-directed RNA polymerase subunit omega OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rpoZ PE=3 SV=1: RNA_pol_Rpb6\tK03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]" }, { "name":"SOIL9_03950 rna polymerase sigma70 : RNA polymerase sigma factor SigA OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=sigA PE=3 SV=1: Sigma70_r1_1: Sigma70_r1_2: Sigma70_r2: Sigma70_r3: Sigma70_r4\tK03086 rpoD; RNA polymerase primary sigma factor" }, { "name":"SOIL9_42540 sigma-70 factor : RNA polymerase, sigma 32 subunit, RpoH OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0433 PE=4 SV=1: Sigma70_r2: Sigma70_r4\tK03086 rpoD; RNA polymerase primary sigma factor" }, { "name":"SOIL9_45590 rna polymerase sigma factor : RNA polymerase sigma factor OS=uncultured planctomycete GN=HGMM_F09D09C22 PE=3 SV=1: Sigma70_r1_2: Sigma70_r2: Sigma70_r3: Sigma70_r4\tK03086 rpoD; RNA polymerase primary sigma factor" }, { "name":"SOIL9_50400 rna polymerase sigma factor : RNA polymerase sigma factor OS=uncultured planctomycete GN=HGMM_F09D09C22 PE=3 SV=1: Sigma70_r1_2: Sigma70_r2: Sigma70_r3: Sigma70_r4\tK03086 rpoD; RNA polymerase primary sigma factor" }, { "name":"SOIL9_51090 rna polymerase sigma factor : RNA polymerase sigma factor OS=uncultured planctomycete GN=HGMM_F09D09C22 PE=3 SV=1: Sigma70_r1_2: Sigma70_r2: Sigma70_r3: Sigma70_r4\tK03086 rpoD; RNA polymerase primary sigma factor" }, { "name":"SOIL9_83290 rna polymerase sigma70 : RNA polymerase sigma factor SigA OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=sigA PE=3 SV=1: Sigma70_r1_2: Sigma70_r2: Sigma70_r3: Sigma70_r4\tK03086 rpoD; RNA polymerase primary sigma factor" }, { "name":"SOIL9_02490 rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0328 PE=4 SV=1: Sigma70_r2\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"SOIL9_19710 rna polymerase sigma-70 ecf-like protein : Transcription regulator LuxR OS=Rhodopirellula sallentina SM41 GN=RSSM_00164 PE=4 SV=1: Sigma70_ECF\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"SOIL9_21260 rna polymerase sigma-70 ecf-rhodopirellula baltica : RNA polymerase sigma-70 ECF-like, Rhodopirellula baltica OS=Rhodopirellula sallentina SM41 GN=RSSM_00487 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"SOIL9_24290 rna polymerase sigma-70 family protein : RNA polymerase sigma-70 factor OS=Gloeobacter violaceus (strain PCC 7421) GN=gll0669 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"SOIL9_25510 rna sigma-24 ecf subfamily : RNA polymerase, sigma-24 subunit, ECF subfamily OS=Dictyoglomus turgidum (strain Z-1310 \/ DSM 6724) GN=Dtur_0843 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"SOIL9_27670 rna polymerase sigma factor : RNA polymerase sigma factor OS=Blastopirellula marina DSM 3645 GN=DSM3645_09692 PE=3 SV=1: Sigma70_r2: Sigma70_r4_2\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"SOIL9_28750 rna sigma-24 ecf subfamily : RNA polymerase sigma-70 domain protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_06130 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"SOIL9_48030 rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_06149 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"SOIL9_51320 rna polymerase ecf-type sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0328 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"SOIL9_59410 rna sigma-24 ecf subfamily : Marine sediment metagenome DNA, contig: S01H1_L06536 OS=marine sediment metagenome GN=S01H1_15949 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"SOIL9_63580 rna polymerase sigma-70 ecf-like protein : DNA-directed RNA polymerase specialized sigma subunit, sigma24 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3738 PE=4 SV=1: Sigma70_ECF\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"SOIL9_67000 rna polymerase sigma factor : RNA polymerase sigma factor OS=Nitrospina gracilis (strain 3\/211) GN=NITGR_90035 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"SOIL9_76560 rna polymerase sigma factor : RNA polymerase sigma-H factor OS=SAR86 cluster bacterium SAR86B GN=algU PE=4 SV=1: Sigma70_r2: Sigma70_r4_2\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"SOIL9_80670 rna polymerase sigma-h factor : : Sigma70_r2\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"SOIL9_85580 rna polymerase ecf-type sigma factor : RNA polymerase, sigma-24 subunit, ECF subfamily OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0099 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"SOIL9_28250 rna sigma 54 : RNA polymerase sigma-54 factor OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1313 PE=4 SV=1: Sigma54_AID: Sigma54_CBD: Sigma54_DBD\tK03092 rpoN; RNA polymerase sigma-54 factor" }, { "name":"SOIL9_13380 rna sigma 28 : RNA polymerase sigma factor for flagellar operon FliA OS=uncultured planctomycete GN=HGMM_F11F07C13 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2\tK02405 fliA; RNA polymerase sigma factor FliA" }, { "name":"SOIL9_67350 rna polymerase sigma70 : RNA polymerase sigma factor OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7408 PE=3 SV=1: Sigma70_r2: Sigma70_r3: Sigma70_r4\tK02405 fliA; RNA polymerase sigma factor FliA" }, { "name":"SOIL9_70880 transcription termination factor : NusA antitermination factor OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_3541 PE=3 SV=1: NusA_N: NusA_N: S1: KH_5\tK02600 nusA; transcription termination\/antitermination protein NusA" }, { "name":"SOIL9_30370 transcription antitermination protein : N utilization substance protein B homolog OS=Rhodopirellula sp. SWK7 GN=nusB PE=3 SV=1: NusB\tK03625 nusB; transcription antitermination protein NusB" }, { "name":"SOIL9_11190 transcription termination antitermination factor : Transcription termination\/antitermination protein NusG OS=Planctomyces maris DSM 8797 GN=nusG PE=3 SV=1: NusG\tK02601 nusG; transcription termination\/antitermination protein NusG" }, { "name":"SOIL9_31750 anti-anti-sigma regulatory factor : Anti-sigma factor antagonist OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_3512 PE=3 SV=1: STAS\tK04749 rsbV; anti-sigma B factor antagonist" }, { "name":"SOIL9_74750 anti-sigma factor antagonist : Anti-sigma-factor antagonist OS=Methanofollis liminatans DSM 4140 GN=Metli_1401 PE=4 SV=1: STAS_2\tK04749 rsbV; anti-sigma B factor antagonist" }, { "name":"SOIL9_01360 unnamed protein product; BLAST_uniprot: no_hits\tK04757 rsbW; serine\/threonine-protein kinase RsbW [EC:2.7.11.1]" }, { "name":"SOIL9_04660 unnamed protein product; BLAST_uniprot: no_hits\tK04757 rsbW; serine\/threonine-protein kinase RsbW [EC:2.7.11.1]" }, { "name":"SOIL9_28370 transcriptional regulator : DnaK suppressor protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6088 PE=4 SV=1: zf-dskA_traR\tK06204 dksA; RNA polymerase-binding transcription factor" }, { "name":"SOIL9_54670 transcription elongation factor : Transcription elongation factor GreA OS=Rhodopirellula sp. SWK7 GN=greA PE=3 SV=1: GreA_GreB_N: GreA_GreB\tK03624 greA; transcription elongation factor GreA" }, { "name":"SOIL9_21530 transcription termination factor rho : Transcription termination factor Rho OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rho PE=3 SV=1: Rho_N: Rho_RNA_bind: ATP-synt_ab\tK03628 rho; transcription termination factor Rho" }, { "name":"SOIL9_47090 transcription termination factor rho : Transcription termination factor Rho OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rho PE=3 SV=1: Rho_RNA_bind: ATP-synt_ab\tK03628 rho; transcription termination factor Rho" }, { "name":"SOIL9_72430 transcription termination factor rho : Transcription termination factor Rho OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rho PE=3 SV=1: Rho_RNA_bind: ATP-synt_ab\tK03628 rho; transcription termination factor Rho" } ] }, { "name":"03019 Messenger RNA biogenesis [BR:gms03019]", "children":[ { "name":"SOIL9_23450 rne rng family : Hypothetical conserved protein OS=uncultured planctomycete GN=HGMM_F07G10C15 PE=4 SV=1: S1: RNase_E_G\tK08300 rne; ribonuclease E [EC:3.1.26.12]" }, { "name":"SOIL9_07640 ribonuclease iii : Ribonuclease 3 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rnc PE=3 SV=1: Ribonucleas_3_3: dsrm\tK03685 rnc; ribonuclease III [EC:3.1.26.3]" }, { "name":"SOIL9_17400 ribonuclease : Ribonuclease Y OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=rny PE=3 SV=1: DUF3552: KH_1: HD\tK18682 rny; ribonucrease Y [EC:3.1.-.-]" }, { "name":"SOIL9_74050 ribonuclease r : Ribonuclease R OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rnr PE=3 SV=1: OB_RNB: RNB: S1\tK12573 rnr; ribonuclease R [EC:3.1.13.1]" }, { "name":"SOIL9_50890 Metal dependent phosphohydrolase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_1993 PE=4 SV=1: TraI_2\tK03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]" }, { "name":"SOIL9_74060 cmp-binding protein : Putative domain HDIG-containing protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1131 PE=4 SV=1: tRNA_anti-codon: HD\tK03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]" }, { "name":"SOIL9_23530 rna helicase : ATP-dependent RNA helicase RhlE OS=Gemmatimonas aurantiaca (strain T-27 \/ DSM 14586 \/ JCM 11422 \/ NBRC 100505) GN=rhlE PE=3 SV=1: DEAD: Helicase_C\tK11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]" }, { "name":"SOIL9_30800 heavy metal transporter : DEAD\/DEAH box helicase domain protein OS=Actinosynnema mirum (strain ATCC 29888 \/ DSM 43827 \/ NBRC 14064 \/ IMRU 3971) GN=Amir_2267 PE=3 SV=1: DEAD: Helicase_C: DbpA\tK05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]" }, { "name":"SOIL9_34260 dead deah box helicase : DEAD\/DEAH box helicase domain protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1620 PE=3 SV=1: DEAD: Helicase_C\tK05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]" }, { "name":"SOIL9_51150 atp-dependent dna helicase : ATP-dependent DNA helicase RecQ OS=Rhodopirellula baltica SH28 GN=RBSH_06099 PE=4 SV=1: DEAD: Helicase_C: RQC: HRDC: HTH_40\tK03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]" }, { "name":"SOIL9_81000 atp-dependent dna helicase : ATP-dependent DNA helicase, RecQ family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1452 PE=4 SV=1: DEAD: Helicase_C\tK03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]" }, { "name":"SOIL9_22170 enolase : Enolase OS=Brevibacillus panacihumi W25 GN=eno PE=3 SV=1: Enolase_N: Enolase_C\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]" }, { "name":"SOIL9_56410 polynucleotide phosphorylase : Polyribonucleotide nucleotidyltransferase OS=uncultured planctomycete GN=pnp PE=3 SV=1: RNase_PH: RNase_PH_C: PNPase: RNase_PH: RNase_PH_C: KH_1: S1\tK00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]" }, { "name":"SOIL9_21530 transcription termination factor rho : Transcription termination factor Rho OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rho PE=3 SV=1: Rho_N: Rho_RNA_bind: ATP-synt_ab\tK03628 rho; transcription termination factor Rho" }, { "name":"SOIL9_47090 transcription termination factor rho : Transcription termination factor Rho OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rho PE=3 SV=1: Rho_RNA_bind: ATP-synt_ab\tK03628 rho; transcription termination factor Rho" }, { "name":"SOIL9_72430 transcription termination factor rho : Transcription termination factor Rho OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rho PE=3 SV=1: Rho_RNA_bind: ATP-synt_ab\tK03628 rho; transcription termination factor Rho" }, { "name":"SOIL9_25310 molecular chaperone : Chaperone protein HscA OS=Terriglobus roseus (strain DSM 18391 \/ NRRL B-41598 \/ KBS 63) GN=Terro_4169 PE=3 SV=1: HSP70: Fe-S_assembly\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SOIL9_54850 Heat shock protein 70 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3585 PE=3 SV=1: HSP70: HSP70\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SOIL9_59680 chaperone protein : Chaperone protein DnaK OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=dnaK PE=2 SV=1: HSP70\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SOIL9_50210 chaperonin : 60 kDa chaperonin OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=groL PE=3 SV=1: Cpn60_TCP1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SOIL9_50230 chaperonin : 60 kDa chaperonin OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=groL PE=3 SV=1: Cpn60_TCP1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SOIL9_50690 chaperonin : 60 kDa chaperonin OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=groL PE=3 SV=1: Cpn60_TCP1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SOIL9_58730 polyphosphate kinase : Polyphosphate kinase OS=Methylacidiphilum fumariolicum SolV GN=ppk PE=3 SV=1: PP_kinase_N: PP_kinase: PP_kinase_C\tK00937 ppk1; polyphosphate kinase [EC:2.7.4.1]" }, { "name":"SOIL9_50980 carbon storage regulator : Carbon storage regulator homolog OS=Rhodopirellula sp. SWK7 GN=csrA PE=3 SV=1: CsrA\tK03563 csrA; carbon storage regulator" }, { "name":"SOIL9_63680 carbon storage regulator : Carbon storage regulator CsrA OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6732 PE=4 SV=1: CsrA\tK03563 csrA; carbon storage regulator" }, { "name":"SOIL9_75660 carbon storage regulator : Carbon storage regulator homolog OS=Caloranaerobacter azorensis H53214 GN=csrA PE=3 SV=1: CsrA\tK03563 csrA; carbon storage regulator" }, { "name":"SOIL9_58200 atp-dependent helicase : ATP-dependent helicase HrpB OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3120 PE=4 SV=1: DEAD: Helicase_C: HA2: HrpB_C\tK03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]" } ] }, { "name":"03041 Spliceosome [BR:gms03041]" }, { "name":"03011 Ribosome [BR:gms03011]", "children":[ { "name":"SOIL9_42260 30s ribosomal protein s1 : Ribosomal protein S1 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5356 PE=4 SV=1: S1: S1: S1\tK02945 RP-S1; small subunit ribosomal protein S1" }, { "name":"SOIL9_50420 30s ribosomal protein s1 : 30S ribosomal protein S1 OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1182 PE=3 SV=1: S1: S1: S1: S1: S1: S1\tK02945 RP-S1; small subunit ribosomal protein S1" }, { "name":"SOIL9_12240 30s ribosomal protein s2 : 30S ribosomal protein S2 OS=Rhodopirellula maiorica SM1 GN=rpsB PE=3 SV=1: Ribosomal_S2\tK02967 RP-S2; small subunit ribosomal protein S2" }, { "name":"SOIL9_84640 30s ribosomal protein s3 : 30S ribosomal protein S3 OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=rpsC PE=3 SV=1: KH_2: Ribosomal_S3_C\tK02982 RP-S3; small subunit ribosomal protein S3" }, { "name":"SOIL9_41000 30s ribosomal protein s4 : 30S ribosomal protein S4 OS=Planctomyces maris DSM 8797 GN=rpsD PE=3 SV=1: Ribosomal_S4: S4\tK02986 RP-S4; small subunit ribosomal protein S4" }, { "name":"SOIL9_84820 30s ribosomal protein s4 : 30S ribosomal protein S4 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rpsD PE=3 SV=1: Ribosomal_S4: S4\tK02986 RP-S4; small subunit ribosomal protein S4" }, { "name":"SOIL9_84750 30s ribosomal protein s5 : 30S ribosomal protein S5 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rpsE PE=3 SV=1: Ribosomal_S5: Ribosomal_S5_C\tK02988 RP-S5; small subunit ribosomal protein S5" }, { "name":"SOIL9_64930 30s ribosomal protein s6 : 30S ribosomal protein S6 OS=Rhodopirellula baltica SWK14 GN=rpsF PE=3 SV=1: Ribosomal_S6\tK02990 RP-S6; small subunit ribosomal protein S6" }, { "name":"SOIL9_11270 30s ribosomal protein s7 : 30S ribosomal protein S7 OS=Blastopirellula marina DSM 3645 GN=rpsG PE=3 SV=1: Ribosomal_S7\tK02992 RP-S7; small subunit ribosomal protein S7" }, { "name":"SOIL9_84720 30s ribosomal protein s8 : 30S ribosomal protein S8 OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=rpsH PE=3 SV=1: Ribosomal_S8\tK02994 RP-S8; small subunit ribosomal protein S8" }, { "name":"SOIL9_06190 30s ribosomal protein s9 : 30S ribosomal protein S9 OS=planctomycete KSU-1 GN=rpsI PE=3 SV=1: Ribosomal_S9\tK02996 RP-S9; small subunit ribosomal protein S9" }, { "name":"SOIL9_84580 30s ribosomal protein s10 : 30S ribosomal protein S10 OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=rpsJ PE=3 SV=1: Ribosomal_S10\tK02946 RP-S10; small subunit ribosomal protein S10" }, { "name":"SOIL9_84810 30s ribosomal protein s11 : 30S ribosomal protein S11 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=rpsK PE=3 SV=1: Ribosomal_S11\tK02948 RP-S11; small subunit ribosomal protein S11" }, { "name":"SOIL9_11260 30s ribosomal protein s12 : 30S ribosomal protein S12 OS=Candidatus Arthromitus sp. SFB-mouse-NL GN=rpsL PE=3 SV=1: Ribosom_S12_S23\tK02950 RP-S12; small subunit ribosomal protein S12" }, { "name":"SOIL9_84800 30s ribosomal protein s13 : 30S ribosomal protein S13 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=rpsM PE=3 SV=1: Ribosomal_S13\tK02952 RP-S13; small subunit ribosomal protein S13" }, { "name":"SOIL9_84710 30s ribosomal protein s14 : 30S ribosomal protein S14 type Z OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=rpsZ PE=3 SV=1: Ribosomal_S14\tK02954 RP-S14; small subunit ribosomal protein S14" }, { "name":"SOIL9_56400 30s ribosomal protein s15 : 30S ribosomal protein S15 OS=uncultured planctomycete GN=rpsO PE=3 SV=1: Ribosomal_S15\tK02956 RP-S15; small subunit ribosomal protein S15" }, { "name":"SOIL9_40140 30s ribosomal protein s16 : 30S ribosomal protein S16 OS=Rhodopirellula baltica (strain SH1) GN=rpsP PE=3 SV=1: Ribosomal_S16\tK02959 RP-S16; small subunit ribosomal protein S16" }, { "name":"SOIL9_84670 30s ribosomal protein s17 : 30S ribosomal protein S17 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rpsQ PE=3 SV=1: Ribosomal_S17\tK02961 RP-S17; small subunit ribosomal protein S17" }, { "name":"SOIL9_40990 30s ribosomal protein s18 : 30S ribosomal protein S18 OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=rpsR PE=3 SV=1: Ribosomal_S18\tK02963 RP-S18; small subunit ribosomal protein S18" }, { "name":"SOIL9_69130 30s ribosomal protein s18 : 30S ribosomal protein S18 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rpsR PE=3 SV=1: Ribosomal_S18\tK02963 RP-S18; small subunit ribosomal protein S18" }, { "name":"SOIL9_84620 30s ribosomal protein s19 : 30S ribosomal protein S19 OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=rpsS PE=3 SV=1: Ribosomal_S19\tK02965 RP-S19; small subunit ribosomal protein S19" }, { "name":"SOIL9_12260 30s ribosomal protein s20 : 30S ribosomal protein S20 OS=Rhodopirellula baltica SWK14 GN=rpsT PE=3 SV=1: Ribosomal_S20p\tK02968 RP-S20; small subunit ribosomal protein S20" }, { "name":"SOIL9_11940 30s ribosomal protein s21 : 30S ribosomal protein S21 OS=Methylophilaceae bacterium 11 GN=rpsU PE=3 SV=1: Ribosomal_S21\tK02970 RP-S21; small subunit ribosomal protein S21" }, { "name":"SOIL9_40450 30s ribosomal protein s21 : 30S ribosomal protein S21 OS=Burkholderia phytofirmans (strain DSM 17436 \/ PsJN) GN=rpsU PE=3 SV=1: Ribosomal_S21\tK02970 RP-S21; small subunit ribosomal protein S21" }, { "name":"SOIL9_11210 50s ribosomal protein l1 : 50S ribosomal protein L1 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rplA PE=3 SV=1: Ribosomal_L1\tK02863 RP-L1; large subunit ribosomal protein L1" }, { "name":"SOIL9_84610 50s ribosomal protein l2 : 50S ribosomal protein L2 OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=rplB PE=3 SV=1: Ribosomal_L2: Ribosomal_L2_C\tK02886 RP-L2; large subunit ribosomal protein L2" }, { "name":"SOIL9_10620 50s ribosomal protein l3 : 50S ribosomal protein L3 OS=Rhodopirellula sallentina SM41 GN=rplC PE=3 SV=1: Ribosomal_L3\tK02906 RP-L3; large subunit ribosomal protein L3" }, { "name":"SOIL9_84590 50s ribosomal protein l4 : 50S ribosomal protein L4 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rplD PE=3 SV=1: Ribosomal_L4\tK02926 RP-L4; large subunit ribosomal protein L4" }, { "name":"SOIL9_84700 50s ribosomal protein l5 : 50S ribosomal protein L5 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=rplE PE=3 SV=1: Ribosomal_L5: Ribosomal_L5_C\tK02931 RP-L5; large subunit ribosomal protein L5" }, { "name":"SOIL9_84730 50s ribosomal protein l6 : 50S ribosomal protein L6 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=rplF PE=3 SV=1: Ribosomal_L6: Ribosomal_L6\tK02933 RP-L6; large subunit ribosomal protein L6" }, { "name":"SOIL9_64910 50s ribosomal protein l9 : 50S ribosomal protein L9 OS=Blastopirellula marina DSM 3645 GN=rplI PE=3 SV=1: Ribosomal_L9_N: Ribosomal_L9_C\tK02939 RP-L9; large subunit ribosomal protein L9" }, { "name":"SOIL9_11220 50s ribosomal protein l10 : 50S ribosomal protein L10 OS=Rhodopirellula maiorica SM1 GN=RMSM_03399 PE=3 SV=1: Ribosomal_L10\tK02864 RP-L10; large subunit ribosomal protein L10" }, { "name":"SOIL9_11200 50s ribosomal protein l11 : 50S ribosomal protein L11 OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=rplK PE=3 SV=1: Ribosomal_L11_N: Ribosomal_L11\tK02867 RP-L11; large subunit ribosomal protein L11" }, { "name":"SOIL9_11230 50s ribosomal protein l7 l12 : 50S ribosomal protein L7\/L12 OS=Salipiger mucosus DSM 16094 GN=rplL PE=3 SV=1: Ribosomal_L12\tK02935 RP-L7; large subunit ribosomal protein L7\/L12" }, { "name":"SOIL9_32600 unnamed protein product; BLAST_uniprot: no_hits\tK02935 RP-L7; large subunit ribosomal protein L7\/L12" }, { "name":"SOIL9_06200 50s ribosomal protein l13 : 50S ribosomal protein L13 OS=Clostridium sp. CAG:590 GN=rplM PE=3 SV=1: Ribosomal_L13\tK02871 RP-L13; large subunit ribosomal protein L13" }, { "name":"SOIL9_84680 50s ribosomal protein l14 : 50S ribosomal protein L14 OS=Anaerotruncus sp. G3(2012) GN=rplN PE=3 SV=1: Ribosomal_L14\tK02874 RP-L14; large subunit ribosomal protein L14" }, { "name":"SOIL9_84760 50s ribosomal protein l15 : 50S ribosomal protein L15 OS=Clostridiales bacterium S7-1-4 GN=rplO PE=3 SV=1: Ribosomal_L18e\tK02876 RP-L15; large subunit ribosomal protein L15" }, { "name":"SOIL9_84650 50s ribosomal protein l16 : 50S ribosomal protein L16 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rplP PE=3 SV=1: Ribosomal_L16\tK02878 RP-L16; large subunit ribosomal protein L16" }, { "name":"SOIL9_84840 50s ribosomal protein l17 : 50S ribosomal protein L17 OS=Ahrensia sp. R2A130 GN=rplQ PE=3 SV=1: Ribosomal_L17\tK02879 RP-L17; large subunit ribosomal protein L17" }, { "name":"SOIL9_84740 50s ribosomal protein l18 : 50S ribosomal protein L18 OS=Paenibacillus curdlanolyticus YK9 GN=rplR PE=3 SV=1: Ribosomal_L18p\tK02881 RP-L18; large subunit ribosomal protein L18" }, { "name":"SOIL9_40120 50s ribosomal protein l19 : 50S ribosomal protein L19 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=rplS PE=3 SV=1: Ribosomal_L19\tK02884 RP-L19; large subunit ribosomal protein L19" }, { "name":"SOIL9_65290 50s ribosomal protein l20 : 50S ribosomal protein L20 OS=Rhodopirellula sallentina SM41 GN=rplT PE=3 SV=1: Ribosomal_L20\tK02887 RP-L20; large subunit ribosomal protein L20" }, { "name":"SOIL9_17560 ribosomal protein l21 : 50S ribosomal protein L21 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=rplU PE=3 SV=1: Ribosomal_L21p\tK02888 RP-L21; large subunit ribosomal protein L21" }, { "name":"SOIL9_84630 50s ribosomal protein l22 : Marine sediment metagenome DNA, contig: S01H1_L00396 OS=marine sediment metagenome GN=S01H1_04180 PE=3 SV=1: Ribosomal_L22\tK02890 RP-L22; large subunit ribosomal protein L22" }, { "name":"SOIL9_84600 50s ribosomal protein l23 : 50S ribosomal protein L23 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rplW PE=3 SV=1: Ribosomal_L23\tK02892 RP-L23; large subunit ribosomal protein L23" }, { "name":"SOIL9_84690 50s ribosomal protein l24 : 50S ribosomal protein L24 OS=Rhodopirellula maiorica SM1 GN=rplX PE=3 SV=1: KOW\tK02895 RP-L24; large subunit ribosomal protein L24" }, { "name":"SOIL9_83600 50s ribosomal protein l27 : 50S ribosomal protein L27 OS=Planctomyces maris DSM 8797 GN=rpmA PE=3 SV=1: Ribosomal_L27\tK02899 RP-L27; large subunit ribosomal protein L27" }, { "name":"SOIL9_82810 50s ribosomal protein l28 : Marine sediment metagenome DNA, contig: S01H4_C04838 OS=marine sediment metagenome GN=S01H4_11764 PE=3 SV=1: Ribosomal_L28\tK02902 RP-L28; large subunit ribosomal protein L28" }, { "name":"SOIL9_84660 50s ribosomal protein l29 : 50S ribosomal protein L29 OS=Planctomyces maris DSM 8797 GN=rpmC PE=3 SV=1: Ribosomal_L29\tK02904 RP-L29; large subunit ribosomal protein L29" }, { "name":"SOIL9_17810 50s ribosomal protein l31 : 50S ribosomal protein L31 type B OS=Ignavibacterium album (strain DSM 19864 \/ JCM 16511 \/ NBRC 101810 \/ Mat9-16) GN=rpmE PE=3 SV=1: Ribosomal_L31\tK02909 RP-L31; large subunit ribosomal protein L31" }, { "name":"SOIL9_84180 50s ribosomal protein l32 : 50S ribosomal protein L32 OS=Thermodesulfobacterium geofontis (strain OPB45) GN=rpmF PE=3 SV=1: Ribosomal_L32p\tK02911 RP-L32; large subunit ribosomal protein L32" }, { "name":"SOIL9_37630 50s ribosomal protein l33 : 50S ribosomal protein L33 OS=Chloracidobacterium thermophilum (strain B) GN=rpmG PE=3 SV=1: Ribosomal_L33\tK02913 RP-L33; large subunit ribosomal protein L33" }, { "name":"SOIL9_65280 50s ribosomal protein l35 : : Ribosomal_L35p\tK02916 RP-L35; large subunit ribosomal protein L35" }, { "name":"SOIL9_64950 50s ribosomal protein l25 : 50S ribosomal protein L25 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rplY PE=3 SV=1: Ribosomal_L25p: Ribosomal_TL5_C\tK02897 RP-L25; large subunit ribosomal protein L25" }, { "name":"SOIL9__R70 score=1415.6; score=1415.6; frame=.\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SOIL9__R80 score=1415.6; score=1415.6; frame=.\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SOIL9__R90 score=1415.6; score=1415.6; frame=.\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SOIL9__R40 score=2588.1; score=2588.1; frame=.\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SOIL9__R50 score=2588.1; score=2588.1; frame=.\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SOIL9__R60 score=2588.1; score=2588.1; frame=.\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SOIL9__R10 score=75.6; score=75.6; frame=.\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SOIL9__R20 score=75.6; score=75.6; frame=.\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SOIL9__R30 score=75.6; score=75.6; frame=.\tK01985 5SrRNA; 5S ribosomal RNA" } ] }, { "name":"03009 Ribosome biogenesis [BR:gms03009]", "children":[ { "name":"SOIL9_07640 ribonuclease iii : Ribonuclease 3 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rnc PE=3 SV=1: Ribonucleas_3_3: dsrm\tK03685 rnc; ribonuclease III [EC:3.1.26.3]" }, { "name":"SOIL9_07350 dna-binding protein smubp-2 : DNA-binding protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_25482 PE=4 SV=1: DbpA: AAA_11: AAA_12\tK19036 IGHMBP2; ATP-dependent RNA\/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]" }, { "name":"SOIL9_06520 gtp-binding protein obg : GTPase Obg OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=obg PE=3 SV=1: GTP1_OBG: MMR_HSR1\tK03979 obgE; GTPase [EC:3.6.5.-]" }, { "name":"SOIL9_28370 transcriptional regulator : DnaK suppressor protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6088 PE=4 SV=1: zf-dskA_traR\tK06204 dksA; RNA polymerase-binding transcription factor" }, { "name":"SOIL9_70880 transcription termination factor : NusA antitermination factor OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_3541 PE=3 SV=1: NusA_N: NusA_N: S1: KH_5\tK02600 nusA; transcription termination\/antitermination protein NusA" }, { "name":"SOIL9_30370 transcription antitermination protein : N utilization substance protein B homolog OS=Rhodopirellula sp. SWK7 GN=nusB PE=3 SV=1: NusB\tK03625 nusB; transcription antitermination protein NusB" }, { "name":"SOIL9_11190 transcription termination antitermination factor : Transcription termination\/antitermination protein NusG OS=Planctomyces maris DSM 8797 GN=nusG PE=3 SV=1: NusG\tK02601 nusG; transcription termination\/antitermination protein NusG" }, { "name":"SOIL9_19920 dimethyladenosine transferase : Ribosomal RNA small subunit methyltransferase A OS=uncultured planctomycete GN=rsmA PE=3 SV=1: RrnaAD\tK02528 ksgA; 16S rRNA (adenine1518-N6\/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]" }, { "name":"SOIL9_74310 sun protein : Sun protein OS=Planctomyces maris DSM 8797 GN=PM8797T_22158 PE=4 SV=1: NusB: Nol1_Nop2_Fmu\tK03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]" }, { "name":"SOIL9_13050 methyltransferase : Uncharacterized protein OS=Rhodopirellula baltica SWK14 GN=RBSWK_01781 PE=4 SV=1: Cons_hypoth95\tK08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]" }, { "name":"SOIL9_11560 16s rrna methyltransferase : Ribosomal RNA small subunit methyltransferase E OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1541 PE=3 SV=1: Methyltrans_RNA\tK09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]" }, { "name":"SOIL9_68340 16s rrna methyltransferase : Ribosomal RNA small subunit methyltransferase H OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rsmH PE=3 SV=1: Methyltransf_5\tK03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]" }, { "name":"SOIL9_70080 16s rrna methyltransferase : Ribosomal RNA small subunit methyltransferase H OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rsmH PE=3 SV=1: Methyltransf_5\tK03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]" }, { "name":"SOIL9_74590 16s rrna methyltransferase : Methyltransferase small OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2178 PE=4 SV=1: MTS\tK11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]" }, { "name":"SOIL9_27090 oxidoreductase : Uncharacterized protein OS=Arenimonas metalli CF5-1 GN=N787_03505 PE=4 SV=1: Methyltrans_SAM\tK06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]" }, { "name":"SOIL9_75570 23s rrna methyltransferase : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_01144 PE=4 SV=1: Methyltrans_SAM\tK06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]" }, { "name":"SOIL9_10320 rna methyltransferase : rRNA (Guanine-N(2)-)-methyltransferase OS=Crinalium epipsammum PCC 9333 GN=Cri9333_0780 PE=4 SV=1: THUMP: UPF0020\tK25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]" }, { "name":"SOIL9_31280 50s rrna methyltransferase : Probable dual-specificity RNA methyltransferase RlmN OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=rlmN PE=3 SV=1\tK06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]" }, { "name":"SOIL9_39020 ribosomal large subunit pseudouridine synthase b : Pseudouridine synthase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2753 PE=3 SV=1: S4: PseudoU_synth_2\tK06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]" }, { "name":"SOIL9_08470 pseudouridine synthase : Pseudouridine synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1548 PE=3 SV=1: PseudoU_synth_2\tK06180 rluD; 23S rRNA pseudouridine1911\/1915\/1917 synthase [EC:5.4.99.23]" }, { "name":"SOIL9_13730 pseudouridine synthase : RNA pseudouridylate synthase OS=Pontibacillus litoralis JSM 072002 GN=N784_13800 PE=4 SV=1: PseudoU_synth_2\tK06180 rluD; 23S rRNA pseudouridine1911\/1915\/1917 synthase [EC:5.4.99.23]" }, { "name":"SOIL9_22350 ribosomal large subunit pseudouridine synthase : Pseudouridine synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4872 PE=3 SV=1: S4: PseudoU_synth_2\tK06180 rluD; 23S rRNA pseudouridine1911\/1915\/1917 synthase [EC:5.4.99.23]" }, { "name":"SOIL9_28620 ribosomal large subunit pseudouridine synthase d : Pseudouridine synthase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_0906 PE=3 SV=1: PseudoU_synth_2\tK06180 rluD; 23S rRNA pseudouridine1911\/1915\/1917 synthase [EC:5.4.99.23]" }, { "name":"SOIL9_42190 ribosomal large subunit pseudouridine synthase d : Pseudouridine synthase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_0906 PE=3 SV=1: PseudoU_synth_2\tK06180 rluD; 23S rRNA pseudouridine1911\/1915\/1917 synthase [EC:5.4.99.23]" }, { "name":"SOIL9_62640 pseudouridine synthase : Putative 23S rRNA pseudouridine synthase OS=Blastopirellula marina DSM 3645 GN=DSM3645_04715 PE=4 SV=1: PseudoU_synth_2\tK06180 rluD; 23S rRNA pseudouridine1911\/1915\/1917 synthase [EC:5.4.99.23]" }, { "name":"SOIL9_29860 ribosomal-protein-alanine acetyltransferase : Ribosomal-protein-alanine acetyltransferase OS=Rhodopirellula sallentina SM41 GN=RSSM_04475 PE=4 SV=1: Acetyltransf_10\tK03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase \/ [ribosomal protein L31]-L-lysine N-acetyltransferase [EC:2.3.1.266 2.3.1.338]" }, { "name":"SOIL9_73000 ribosomal protein s12 methylthiotransferase : Ribosomal protein S12 methylthiotransferase RimO OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rimO PE=3 SV=1: UPF0004: Radical_SAM\tK14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]" }, { "name":"SOIL9_23450 rne rng family : Hypothetical conserved protein OS=uncultured planctomycete GN=HGMM_F07G10C15 PE=4 SV=1: S1: RNase_E_G\tK08300 rne; ribonuclease E [EC:3.1.26.12]" }, { "name":"SOIL9_40180 holliday junction resolvase : Putative Holliday junction resolvase OS=Rhodopirellula baltica WH47 GN=RBWH47_03932 PE=3 SV=1: UPF0081\tK07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]" }, { "name":"SOIL9_30800 heavy metal transporter : DEAD\/DEAH box helicase domain protein OS=Actinosynnema mirum (strain ATCC 29888 \/ DSM 43827 \/ NBRC 14064 \/ IMRU 3971) GN=Amir_2267 PE=3 SV=1: DEAD: Helicase_C: DbpA\tK05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]" }, { "name":"SOIL9_34260 dead deah box helicase : DEAD\/DEAH box helicase domain protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1620 PE=3 SV=1: DEAD: Helicase_C\tK05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]" }, { "name":"SOIL9_68200 ribosome small subunit-dependent gtpase a : Putative ribosome biogenesis GTPase RsgA OS=uncultured planctomycete GN=rsgA PE=3 SV=1: DUF258\tK06949 rsgA; ribosome biogenesis GTPase \/ thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]" }, { "name":"SOIL9_63020 ribosome-associated gtpase : GTPase Der OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=der PE=3 SV=1: MMR_HSR1: MMR_HSR1: KH_dom-like\tK03977 engA; GTPase" }, { "name":"SOIL9_74790 gtp-binding protein : GTPase HflX OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=hflX PE=3 SV=1: GTP-bdg_N: MMR_HSR1\tK03665 hflX; GTPase" }, { "name":"SOIL9_74520 translation factor sua5 : Uncharacterized protein OS=Actinoplanes utahensis GN=MB27_13500 PE=4 SV=1: Sua5_yciO_yrdC: SUA5\tK07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]" }, { "name":"SOIL9_64250 ribosome-binding factor a : Uncharacterized protein OS=Sorangium cellulosum So0157-2 GN=SCE1572_22215 PE=4 SV=1: RBFA\tK02834 rbfA; ribosome-binding factor A" }, { "name":"SOIL9_70910 ribosome-binding factor a : Ribosome-binding factor A OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=rbfA PE=3 SV=1: RBFA\tK02834 rbfA; ribosome-binding factor A" }, { "name":"SOIL9_06540 iojap-related protein : Ribosomal silencing factor RsfS OS=Blastopirellula marina DSM 3645 GN=rsfS PE=3 SV=1: Oligomerisation\tK09710 ybeB; ribosome-associated protein" }, { "name":"SOIL9_07180 16s rrna maturation rnase : Endoribonuclease YbeY OS=uncultured planctomycete GN=ybeY PE=3 SV=1: UPF0054\tK07042 ybeY; probable rRNA maturation factor" }, { "name":"SOIL9_23400 ribosomal subunit interface protein : 30S ribosomal protein S30 OS=uncultured planctomycete GN=HGMM_F07G10C20 PE=4 SV=1: Ribosomal_S30AE\tK05808 hpf; ribosome hibernation promoting factor" }, { "name":"SOIL9_03180 gtp-binding protein : Putative GTPase, probable translation factor OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5894 PE=4 SV=1: MMR_HSR1: YchF-GTPase_C\tK06942 ychF; ribosome-binding ATPase" }, { "name":"SOIL9_31890 gtp-binding protein : Ribosome-binding ATPase YchF OS=Rhodospirillum rubrum F11 GN=ychF PE=3 SV=1: MMR_HSR1: YchF-GTPase_C\tK06942 ychF; ribosome-binding ATPase" } ] }, { "name":"03016 Transfer RNA biogenesis [BR:gms03016]", "children":[ { "name":"SOIL9_18640 Ribonuclease Z OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_3369 PE=4 SV=1: Lactamase_B_2\tK00784 rnz; ribonuclease Z [EC:3.1.26.11]" }, { "name":"SOIL9_51420 Uncharacterized protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_0039 PE=4 SV=1: Lactamase_B_2\tK00784 rnz; ribonuclease Z [EC:3.1.26.11]" }, { "name":"SOIL9_25210 metal dependent phosphohydrolase : tRNA nucleotidyltransferase\/poly(A) polymerase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5938 PE=3 SV=1: PolyA_pol: PolyA_pol_RNAbd: tRNA_NucTran2_2\tK00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]" }, { "name":"SOIL9_17510 rna terminal phosphate cyclase : RNA-splicing ligase RtcB (Fragment) OS=uncultured planctomycete GN=HGMM_F01A04C27 PE=3 SV=1: RtcB\tK14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate\/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]" }, { "name":"SOIL9_17520 Marine sediment metagenome DNA, contig: S01H1_S08779 OS=marine sediment metagenome GN=S01H1_37489 PE=4 SV=1: Archease\tK24956 ZBTB8OS; protein archease" }, { "name":"SOIL9_05650 glutamyl-q trna ligase : Glutamyl-or glutaminyl-tRNA synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1159 PE=3 SV=1: tRNA-synt_1c\tK01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]" }, { "name":"SOIL9_83590 prolyl-trna synthetase : Proline--tRNA ligase OS=Dysgonomonas gadei ATCC BAA-286 GN=proS PE=3 SV=1: tRNA-synt_2b: HGTP_anticodon: ProRS-C_1\tK01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]" }, { "name":"SOIL9_76630 isoleucyl-trna synthetase : Isoleucine--tRNA ligase OS=uncultured Acidobacteria bacterium A2 PE=4 SV=1: tRNA-synt_1: tRNA-synt_1: Anticodon_1\tK01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]" }, { "name":"SOIL9_23170 leucyl-trna synthetase : Leucine--tRNA ligase OS=uncultured planctomycete GN=leuS PE=3 SV=1: tRNA-synt_1: tRNA-synt_1_2: tRNA-synt_1: Anticodon_1\tK01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]" }, { "name":"SOIL9_46920 methionyl-trna synthetase : Methionine--tRNA ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=metG PE=3 SV=1: tRNA-synt_1g: Anticodon_1\tK01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]" }, { "name":"SOIL9_06530 arginyl-trna synthetase : Arginine--tRNA ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=argS PE=3 SV=1: Arg_tRNA_synt_N: tRNA-synt_1d: DALR_1\tK01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]" }, { "name":"SOIL9_07220 lysyl-trna synthetase : Lysine--tRNA ligase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=lysS PE=3 SV=1: tRNA_anti-codon: tRNA-synt_2\tK04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]" }, { "name":"SOIL9_17020 aspartyl-trna synthetase : Aspartate--tRNA(Asp\/Asn) ligase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=aspS PE=3 SV=1: tRNA_anti-codon: tRNA-synt_2: GAD\tK01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]" }, { "name":"SOIL9_62840 alanyl-trna synthetase : Alanine--tRNA ligase OS=Malassezia globosa (strain ATCC MYA-4612 \/ CBS 7966) GN=ALA1 PE=3 SV=1: tRNA-synt_2c: tRNA_SAD: DHHA1\tK01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]" }, { "name":"SOIL9_23590 asparaginyl-trna synthetase : Asparagine--tRNA ligase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=asnS PE=3 SV=1: tRNA_anti-codon: tRNA-synt_2\tK01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]" }, { "name":"SOIL9_46420 glycyl-trna synthetase : Glycine--tRNA ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=glyQS PE=3 SV=1: tRNA-synt_2b: HGTP_anticodon\tK01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]" }, { "name":"SOIL9_29120 threonyl-trna synthetase : Threonine--tRNA ligase OS=Herpetosiphon aurantiacus (strain ATCC 23779 \/ DSM 785) GN=thrS PE=3 SV=1: tRNA_SAD: tRNA-synt_2b: HGTP_anticodon\tK01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]" }, { "name":"SOIL9_31460 seryl-trna synthetase : Serine--tRNA ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=serS PE=3 SV=1: Seryl_tRNA_N: tRNA-synt_2b\tK01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]" }, { "name":"SOIL9_69860 cysteinyl-trna synthetase : Cysteine--tRNA ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=cysS PE=3 SV=1: tRNA-synt_1e: DALR_2\tK01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]" }, { "name":"SOIL9_12010 valyl-trna synthetase : Valine--tRNA ligase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=valS PE=3 SV=1: tRNA-synt_1: Anticodon_1: Val_tRNA-synt_C\tK01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]" }, { "name":"SOIL9_54580 histidyl-trna synthetase : Histidine--tRNA ligase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=hisS PE=3 SV=1: tRNA-synt_His: HGTP_anticodon\tK01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]" }, { "name":"SOIL9_67900 phenylalanyl-trna synthetase subunit alpha : Phenylalanine--tRNA ligase alpha subunit OS=Roseiflexus sp. (strain RS-1) GN=pheS PE=3 SV=1: Phe_tRNA-synt_N: tRNA-synt_2d\tK01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]" }, { "name":"SOIL9_42840 phenylalanyl-trna synthetase subunit beta : Phenylalanine--tRNA ligase beta subunit OS=Anaerolinea thermophila (strain DSM 14523 \/ JCM 11388 \/ NBRC 100420 \/ UNI-1) GN=pheT PE=3 SV=1: tRNA_bind: B3_4: B5: FDX-ACB\tK01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]" }, { "name":"SOIL9_40100 tyrosyl-trna synthetase : Tyrosine--tRNA ligase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_2772 PE=4 SV=1: tRNA-synt_1b\tK01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]" }, { "name":"SOIL9_20440 tryptophanyl-trna synthetase : Tryptophan--tRNA ligase OS=Ilyobacter polytropus (strain DSM 2926 \/ CuHBu1) GN=trpS PE=3 SV=1: tRNA-synt_1b\tK01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]" }, { "name":"SOIL9_56300 d-tyrosyl-trna deacylase : D-tyrosyl-tRNA(Tyr) deacylase OS=Clostridium sordellii GN=dtd PE=4 SV=1: Tyr_Deacylase\tK07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]" }, { "name":"SOIL9_82280 zinc-binding protein : Histidine triad nucleotide-binding protein 1 OS=Pseudomonas sp. P482 GN=BV82_1936 PE=4 SV=1: HIT\tK02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]" }, { "name":"SOIL9_64120 trna-i a37 thiotransferase enzyme : tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=miaB PE=3 SV=1: UPF0004: Radical_SAM: TRAM\tK06168 CDK5RAP1; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]" }, { "name":"SOIL9_23370 trna (guanine-n7)-methyltransferase : Putative methyltransferase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2576 PE=4 SV=1: Methyltransf_4\tK03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]" }, { "name":"SOIL9_24360 trna (guanine-n -)-methyltransferase : tRNA (guanine-N(7)-)-methyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=trmB PE=3 SV=1: Methyltransf_4\tK03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]" }, { "name":"SOIL9_59360 trna pseudouridine synthase a : tRNA pseudouridine synthase A OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=truA PE=3 SV=1: PseudoU_synth_1: PseudoU_synth_1\tK06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]" }, { "name":"SOIL9_12210 trna pseudouridine synthase b : tRNA pseudouridine synthase B OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=truB PE=3 SV=1: TruB_N: TruB-C_2\tK03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]" }, { "name":"SOIL9_19260 trna pseudouridine synthase d : tRNA pseudouridine synthase D OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=truD PE=3 SV=1: TruD\tK06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]" }, { "name":"SOIL9_82190 trna pseudouridine synthase d : tRNA pseudouridine synthase D OS=Planctomyces maris DSM 8797 GN=truD PE=3 SV=1: TruD\tK06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]" }, { "name":"SOIL9_00460 cysteine desulfurase : Cysteine desulfurase family protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0245 PE=4 SV=1: Aminotran_5: Aminotran_5\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]" }, { "name":"SOIL9_25240 cysteine desulfurase : Cysteine desulfurase IscS OS=Acidobacterium capsulatum (strain ATCC 51196 \/ DSM 11244 \/ JCM 7670) GN=icsS2 PE=3 SV=1: Aminotran_5\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]" }, { "name":"SOIL9_74520 translation factor sua5 : Uncharacterized protein OS=Actinoplanes utahensis GN=MB27_13500 PE=4 SV=1: Sua5_yciO_yrdC: SUA5\tK07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]" }, { "name":"SOIL9_07170 trna delta -isopentenylpyrophosphate transferase : tRNA dimethylallyltransferase OS=Planctomyces maris DSM 8797 GN=miaA PE=3 SV=1: IPPT\tK00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]" }, { "name":"SOIL9_06500 trna modification gtpase : Small GTP-binding protein domain protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6522 PE=4 SV=1: MMR_HSR1\tK03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]" }, { "name":"SOIL9_70380 trna modification gtpase : tRNA modification GTPase MnmE OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=mnmE PE=3 SV=1: TrmE_N: TrmE_N: MMR_HSR1: GTPase_Cys_C\tK03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]" }, { "name":"SOIL9_27810 trna uridine 5-carboxymethylaminomethyl modification protein : tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=mnmG PE=3 SV=1: GIDA: GIDA_assoc_3\tK03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme" }, { "name":"SOIL9_23470 segregation protein b : Selenide, water dikinase OS=Chloracidobacterium thermophilum (strain B) GN=selD PE=3 SV=1: AIRS: AIRS_C\tK01008 selD; selenide, water dikinase [EC:2.7.9.3]" }, { "name":"SOIL9_55920 trna-his guanylyltransferase : Uncharacterized protein OS=bacterium UASB270 GN=U27_04421 PE=4 SV=1: Thg1: Thg1C\tK10761 THG1; tRNA(His) guanylyltransferase [EC:2.7.7.79]" }, { "name":"SOIL9_16180 inositol monophosphatase : Marine sediment metagenome DNA, contig: S01H1_S20488 (Fragment) OS=marine sediment metagenome GN=S01H1_54351 PE=4 SV=1: Inositol_P\tK01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]" }, { "name":"SOIL9_00830 ribonuclease p protein component : Ribonuclease P protein component OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=rnpA PE=3 SV=1: Ribonuclease_P\tK03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]" }, { "name":"SOIL9_20420 ribonuclease ph : Ribonuclease PH OS=Blastopirellula marina DSM 3645 GN=rph PE=3 SV=1: RNase_PH: RNase_PH_C\tK00989 rph; ribonuclease PH [EC:2.7.7.56]" }, { "name":"SOIL9_27340 ribonuclease d : Ribonuclease D OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0672 PE=4 SV=1: DNA_pol_A_exo1: HRDC\tK03684 rnd; ribonuclease D [EC:3.1.13.5]" }, { "name":"SOIL9_64030 2 -5 rna ligase : Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1: LigT_PEase: LigT_PEase\tK01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]" }, { "name":"SOIL9_27570 rna 2 -phosphotransferase : Probable RNA 2'-phosphotransferase OS=Nostoc sp. PCC 7107 GN=kptA PE=3 SV=1: PTS_2-RNA\tK07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]" }, { "name":"SOIL9_74680 heme abc transporter atp-binding protein : ABC transporter related protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2142 PE=3 SV=1: ABC_tran: ABC_tran_2: ABC_tran\tK06020 ettA; energy-dependent translational throttle protein EttA" }, { "name":"SOIL9_54960 cmp dcmp deaminase zinc-binding protein : tRNA-specific adenosine deaminase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=tadA PE=3 SV=1: dCMP_cyt_deam_1\tK11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]" }, { "name":"SOIL9_19860 trna-u20-dihydrouridine synthase : tRNA-dihydrouridine synthase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1782 PE=3 SV=1: Dus\tK05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]" }, { "name":"SOIL9_55290 trna-dihydrouridine synthase c : tRNA-dihydrouridine synthase OS=Fimbriimonas ginsengisoli Gsoil 348 GN=OP10G_1493 PE=3 SV=1: Dus\tK05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]" }, { "name":"SOIL9_08580 sam-dependent methyltransferase : Putative uncharacterized protein OS=[Oscillatoria] sp. PCC 6506 GN=OSCI_2820001 PE=4 SV=1: Methyltransf_18\tK15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]" }, { "name":"SOIL9_60020 methyltransferase type 11 : Methyltransferase type 12 OS=Herpetosiphon aurantiacus (strain ATCC 23779 \/ DSM 785) GN=Haur_3981 PE=4 SV=1: Methyltransf_11\tK15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]" }, { "name":"SOIL9_68720 rna methyltransferase : RNA methyltransferase, TrmH family, group 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=CYA_1953 PE=4 SV=1: SpoU_methylase\tK02533 lasT; tRNA\/rRNA methyltransferase [EC:2.1.1.-]" }, { "name":"SOIL9_40130 trna (guanine-n1)-methyltransferase : tRNA (guanine-N(1)-)-methyltransferase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=trmD PE=3 SV=1: tRNA_m1G_MT\tK00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]" }, { "name":"SOIL9_76790 trna methyltransferase : Putative tRNA (cytidine(34)-2'-O)-methyltransferase OS=Brevibacillus sp. BC25 GN=PMI05_04709 PE=3 SV=1: SpoU_methylase\tK03216 trmL; tRNA (cytidine\/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]" }, { "name":"SOIL9_65340 rna methylase : RNA methylase OS=uncultured planctomycete GN=HGMM_F22C11C22 PE=4 SV=1: UPF0020\tK16318 trm14; tRNA (guanine6-N2)-methyltransferase [EC:2.1.1.256]" }, { "name":"SOIL9_74620 trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase : tRNA-specific 2-thiouridylase MnmA OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=mnmA PE=3 SV=1: tRNA_Me_trans\tK00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]" }, { "name":"SOIL9_25270 cluster insertion : FeS cluster insertion OS=Rhodopirellula sallentina SM41 GN=RSSM_04857 PE=4 SV=1: Fe-S_biosyn\tK13628 iscA; iron-sulfur cluster assembly protein" }, { "name":"SOIL9_69350 s-adenosylmethionine trna ribosyltransferase : S-adenosylmethionine:tRNA ribosyltransferase-isomerase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=queA PE=3 SV=1: Queuosine_synth\tK07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]" }, { "name":"SOIL9_67880 7-cyano-7-deazaguanine synthase : 7-cyano-7-deazaguanine synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5863 PE=4 SV=1: QueC\tK06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]" }, { "name":"SOIL9_73510 7-cyano-7-deazaguanine synthase : 7-cyano-7-deazaguanine synthase OS=Myxococcus fulvus (strain ATCC BAA-855 \/ HW-1) GN=queC PE=3 SV=1: QueC\tK06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]" }, { "name":"SOIL9_11430 6-pyruvoyl-tetrahydropterin synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1233 PE=4 SV=1: PTPS\tK01737 queD; 6-pyruvoyltetrahydropterin\/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]" }, { "name":"SOIL9_67890 6-pyruvoyl-tetrahydropterin synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5864 PE=4 SV=1: PTPS\tK01737 queD; 6-pyruvoyltetrahydropterin\/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]" }, { "name":"SOIL9_34730 7-carboxy-7-deazaguanine synthase : 7-carboxy-7-deazaguanine synthase OS=Sorangium cellulosum (strain So ce56) GN=queE PE=3 SV=1: Fer4_14: Radical_SAM\tK10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]" }, { "name":"SOIL9_73520 7-cyano-7-deazaguanine reductase : NADPH-dependent 7-cyano-7-deazaguanine reductase OS=Rhodopirellula sallentina SM41 GN=queF PE=3 SV=1: QueF\tK09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]" }, { "name":"SOIL9_58880 iron-sulfur cluster-binding protein : Iron-sulfur cluster-binding protein OS=Rhodopirellula sallentina SM41 GN=RSSM_04547 PE=4 SV=1: DUF1730: Fer4_16: HEAT_2\tK18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]" }, { "name":"SOIL9_50340 queuine trna-ribosyltransferase : Queuine tRNA-ribosyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=tgt PE=3 SV=1: TGT\tK00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]" }, { "name":"SOIL9_54720 trna -lysidine synthetase : tRNA(Ile)-lysidine synthase OS=Clostridium botulinum D str. 16868 GN=tilS PE=3 SV=1: ATP_bind_3: ATP_bind_3\tK04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]" }, { "name":"SOIL9_71000 peptidase m22 : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_31750 PE=4 SV=1: Peptidase_M22\tK14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB" }, { "name":"SOIL9_38630 trna threonylcarbamoyladenosine modification protein : tRNA N6-adenosine threonylcarbamoyltransferase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=tsaD PE=3 SV=1: Peptidase_M22\tK25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]" }, { "name":"SOIL9_24410 p-loop family : Nucleotide-binding protein OS=Peptoniphilus indolicus ATCC 29427 GN=yjeE PE=4 SV=1: UPF0079\tK06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE" }, { "name":"SOIL9_74050 ribonuclease r : Ribonuclease R OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rnr PE=3 SV=1: OB_RNB: RNB: S1\tK12573 rnr; ribonuclease R [EC:3.1.13.1]" }, { "name":"SOIL9_56410 polynucleotide phosphorylase : Polyribonucleotide nucleotidyltransferase OS=uncultured planctomycete GN=pnp PE=3 SV=1: RNase_PH: RNase_PH_C: PNPase: RNase_PH: RNase_PH_C: KH_1: S1\tK00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]" }, { "name":"SOIL9_72630 plasmid maintenance protein : Ribonuclease VapC OS=uncultured bacterium GN=vapC PE=3 SV=1: PIN\tK18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]" } ] }, { "name":"03012 Translation factors [BR:gms03012]", "children":[ { "name":"SOIL9_59240 translation initiation factor sui1 : Translation initiation factor 1 (EIF-1\/SUI1) OS=Halomonas sp. HAL1 GN=HAL1_19004 PE=4 SV=1: SUI1\tK03113 EIF1; translation initiation factor 1" }, { "name":"SOIL9_70890 translation initiation factor if-2 : Translation initiation factor IF-2 OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=infB PE=3 SV=1: IF2_N: GTP_EFTU: GTP_EFTU_D2: IF-2\tK02519 infB; translation initiation factor IF-2" }, { "name":"SOIL9_69190 translation initiation factor if-3 : Translation initiation factor IF-3 OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=infC PE=3 SV=1: IF3_N: IF3_C\tK02520 infC; translation initiation factor IF-3" }, { "name":"SOIL9_10420 abc transporter atp-binding protein : ABC transporter related protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1648 PE=3 SV=1: ABC_tran: ABC_tran_2: ABC_tran\tK06158 ABCF3; ATP-binding cassette, subfamily F, member 3" }, { "name":"SOIL9_66510 multidrug abc transporter atp-binding protein : ATPase component of ABC transporters with duplicated ATPase domain OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5820 PE=3 SV=1: ABC_tran: ABC_tran_2: ABC_tran\tK06158 ABCF3; ATP-binding cassette, subfamily F, member 3" }, { "name":"SOIL9_07350 dna-binding protein smubp-2 : DNA-binding protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_25482 PE=4 SV=1: DbpA: AAA_11: AAA_12\tK19036 IGHMBP2; ATP-dependent RNA\/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]" }, { "name":"SOIL9_12250 elongation factor ts : Elongation factor Ts OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=tsf PE=3 SV=1: UBA: EF_TS\tK02357 tsf; elongation factor Ts" }, { "name":"SOIL9_03630 elongation factor tu : Elongation factor Tu OS=Planctomyces maris DSM 8797 GN=tuf PE=3 SV=1: GTP_EFTU: GTP_EFTU_D2: GTP_EFTU_D3\tK02358 tuf; elongation factor Tu" }, { "name":"SOIL9_11170 elongation factor tu : Elongation factor Tu OS=Rhodopirellula maiorica SM1 GN=tuf PE=3 SV=1: GTP_EFTU: GTP_EFTU_D2: GTP_EFTU_D3\tK02358 tuf; elongation factor Tu" }, { "name":"SOIL9_11280 translation elongation factor g : Elongation factor G OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=fusA PE=3 SV=1: GTP_EFTU: GTP_EFTU_D2: EFG_II: EFG_IV: EFG_C\tK02355 fusA; elongation factor G" }, { "name":"SOIL9_29360 elongation factor g : Translation elongation factor-like GTPase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2640 PE=4 SV=1: GTP_EFTU: GTP_EFTU_D2: EFG_II: EFG_IV: EFG_IV: EFG_C\tK02355 fusA; elongation factor G" }, { "name":"SOIL9_66010 translation elongation factor g : Elongation factor G OS=Thermosediminibacter oceani (strain ATCC BAA-1034 \/ DSM 16646 \/ JW\/IW-1228P) GN=fusA PE=3 SV=1: GTP_EFTU: GTP_EFTU_D2: EFG_II: EFG_IV: EFG_C\tK02355 fusA; elongation factor G" }, { "name":"SOIL9_27010 selenocysteine-specific translation elongation factor : Selenocysteine-specific elongation factor OS=uncultured planctomycete GN=HGMM_F37F03C06 PE=4 SV=1: GTP_EFTU: GTP_EFTU_D2: SelB-wing_3\tK03833 selB; selenocysteine-specific elongation factor" }, { "name":"SOIL9_17800 peptide chain release factor 1 : Peptide chain release factor 1 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=prfA PE=3 SV=1: PCRF: RF-1\tK02835 prfA; peptide chain release factor 1" }, { "name":"SOIL9_21390 ribosome recycling factor : Ribosome-recycling factor OS=Rhodopirellula baltica SWK14 GN=frr PE=3 SV=1: RRF\tK02838 frr; ribosome recycling factor" }, { "name":"SOIL9_09940 modification methylase : Release factor glutamine methyltransferase OS=uncultured planctomycete GN=prmC PE=3 SV=1: Methyltransf_26\tK02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]" }, { "name":"SOIL9_64940 peptidyl-trna hydrolase : Peptidyl-tRNA hydrolase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=pth PE=3 SV=1: Pept_tRNA_hydro\tK01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]" }, { "name":"SOIL9_69540 translation initiation factor if-1 : Translation initiation factor IF-1 OS=Rubrobacter xylanophilus (strain DSM 9941 \/ NBRC 16129) GN=infA PE=3 SV=1: eIF-1a\tK02518 infA; translation initiation factor IF-1" }, { "name":"SOIL9_53090 translation elongation factor p : Elongation factor P OS=Candidatus Entotheonella sp. TSY1 GN=efp PE=3 SV=1: EFP_N: EFP: Elong-fact-P_C\tK02356 efp; elongation factor P" }, { "name":"SOIL9_24420 peptide chain release factor 2 : Peptide chain release factor 2 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1160 PE=4 SV=1: PCRF: RF-1\tK02836 prfB; peptide chain release factor 2" }, { "name":"SOIL9_42690 peptide chain release factor i : Class I peptide chain release factor OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2978 PE=4 SV=1: RF-1\tK15034 yaeJ; ribosome-associated protein" } ] }, { "name":"03110 Chaperones and folding catalysts [BR:gms03110]", "children":[ { "name":"SOIL9_62080 atp-dependent chaperone : ATPase AAA-2 domain protein OS=Solibacter usitatus (strain Ellin6076) GN=Acid_0505 PE=3 SV=1: Clp_N: Clp_N: AAA: AAA_2: ClpB_D2-small\tK03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB" }, { "name":"SOIL9_03360 atp-dependent clp protease atp-binding protein : ATPase with chaperone activity, ATP-binding subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6482 PE=4 SV=1: Clp_N: Clp_N: AAA: UVR: AAA_2: ClpB_D2-small\tK03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC" }, { "name":"SOIL9_05990 atpase aaa : ATP-dependent Clp protease ATP-binding subunit ClpX OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=clpX PE=3 SV=1: zf-C4_ClpX: AAA_2: ClpB_D2-small\tK03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX" }, { "name":"SOIL9_16030 atp-dependent protease : ATP-dependent protease ATPase subunit HslU OS=Planctomyces maris DSM 8797 GN=hslU PE=3 SV=1: AAA_2: AAA_2: ClpB_D2-small\tK03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU" }, { "name":"SOIL9_59030 heat shock protein 90 : Chaperone protein HtpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1: HATPase_c_3: HSP90\tK04079 HSP90A; molecular chaperone HtpG" }, { "name":"SOIL9_25310 molecular chaperone : Chaperone protein HscA OS=Terriglobus roseus (strain DSM 18391 \/ NRRL B-41598 \/ KBS 63) GN=Terro_4169 PE=3 SV=1: HSP70: Fe-S_assembly\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SOIL9_54850 Heat shock protein 70 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3585 PE=3 SV=1: HSP70: HSP70\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SOIL9_59680 chaperone protein : Chaperone protein DnaK OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=dnaK PE=2 SV=1: HSP70\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SOIL9_82870 molecular chaperone : Heat shock protein 70 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3027 PE=3 SV=1: HSP70: HSP70\tK04045 hscC; molecular chaperone HscC" }, { "name":"SOIL9_50210 chaperonin : 60 kDa chaperonin OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=groL PE=3 SV=1: Cpn60_TCP1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SOIL9_50230 chaperonin : 60 kDa chaperonin OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=groL PE=3 SV=1: Cpn60_TCP1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SOIL9_50690 chaperonin : 60 kDa chaperonin OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=groL PE=3 SV=1: Cpn60_TCP1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SOIL9_50200 chaperone protein : Chaperone protein DnaJ OS=Xenorhabdus doucetiae GN=dnaJ PE=3 SV=1: DnaJ: DnaJ_CXXCXGXG: CTDII\tK03686 dnaJ; molecular chaperone DnaJ" }, { "name":"SOIL9_00820 molecular chaperone : Heat shock protein DnaJ-like protein OS=Planctomyces maris DSM 8797 GN=PM8797T_24486 PE=4 SV=1: DnaJ: CTDII\tK05516 cbpA; curved DNA-binding protein" }, { "name":"SOIL9_25280 fe-s protein assembly co-chaperone : Heat shock protein DnaJ-like protein OS=Koribacter versatilis (strain Ellin345) GN=Acid345_0481 PE=4 SV=1: DnaJ: HSCB_C\tK04082 hscB; molecular chaperone HscB" }, { "name":"SOIL9_50190 co-chaperone : Protein GrpE OS=Planococcus donghaensis MPA1U2 GN=grpE PE=3 SV=1: GrpE\tK03687 GRPE; molecular chaperone GrpE" }, { "name":"SOIL9_10500 Heat shock protein, HSP20 OS=Rhodopirellula maiorica SM1 GN=RMSM_05792 PE=3 SV=1: HSP20\tK13993 HSP20; HSP20 family protein" }, { "name":"SOIL9_49370 Heat shock protein, HSP20 OS=Rhodopirellula maiorica SM1 GN=RMSM_05792 PE=3 SV=1: HSP20\tK13993 HSP20; HSP20 family protein" }, { "name":"SOIL9_49380 Heat shock protein Hsp20 OS=Rhodopirellula maiorica SM1 GN=RMSM_05793 PE=3 SV=1: HSP20\tK13993 HSP20; HSP20 family protein" }, { "name":"SOIL9_49390 Heat shock protein OS=planctomycete KSU-1 GN=KSU1_D0143 PE=3 SV=1: HSP20\tK13993 HSP20; HSP20 family protein" }, { "name":"SOIL9_60760 Small heat shock protein OS=Planctomyces maris DSM 8797 GN=PM8797T_27704 PE=3 SV=1: HSP20\tK13993 HSP20; HSP20 family protein" }, { "name":"SOIL9_60770 Heat shock protein Hsp20 OS=Rhodopirellula europaea SH398 GN=RESH_01705 PE=3 SV=1: HSP20\tK13993 HSP20; HSP20 family protein" }, { "name":"SOIL9_60780 Heat shock protein, HSP20 OS=Rhodopirellula maiorica SM1 GN=RMSM_05792 PE=3 SV=1: HSP20\tK13993 HSP20; HSP20 family protein" }, { "name":"SOIL9_60850 Heat shock protein, HSP20 OS=Rhodopirellula maiorica SM1 GN=RMSM_05792 PE=3 SV=1: HSP20\tK13993 HSP20; HSP20 family protein" }, { "name":"SOIL9_60860 Hsp20\/alpha crystallin family protein OS=delta proteobacterium NaphS2 GN=NPH_7165 PE=3 SV=1: HSP20\tK13993 HSP20; HSP20 family protein" }, { "name":"SOIL9_50220 10 kda chaperonin : 10 kDa chaperonin OS=Rhodopirellula baltica SWK14 GN=groS PE=3 SV=1: Cpn10\tK04078 groES; chaperonin GroES" }, { "name":"SOIL9_50680 chaperonin cpn10 : 10 kDa chaperonin OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=groS PE=3 SV=1: Cpn10\tK04078 groES; chaperonin GroES" }, { "name":"SOIL9_69520 chaperonin cpn10 : 10 kDa chaperonin OS=planctomycete KSU-1 GN=groS PE=3 SV=1: Cpn10\tK04078 groES; chaperonin GroES" }, { "name":"SOIL9_10890 pdz dhr glgf domain protein : PDZ\/DHR\/GLGF domain protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3926 PE=4 SV=1: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_14020 peptidase s1 and s6 chymotrypsin hap : Peptidase S1 and S6 chymotrypsin\/Hap OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1379 PE=4 SV=1: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_19300 pdz dhr glgf domain-containing protein : Trypsin-like serine protease with C-terminal PDZ domain OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5148 PE=4 SV=1: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_24480 serine protease : Serine protease OS=Azospirillum brasilense GN=ABAZ39_16055 PE=4 SV=1: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_27940 protease do : Serine protease, trypsin family OS=uncultured planctomycete GN=HGMM_F01A04C13 PE=4 SV=1: Trypsin_2: PDZ_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_42480 protease do : Protease Do OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1472 PE=4 SV=1: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_48370 peptidase s1 and s6 chymotrypsin hap : Peptidase S1 and S6 chymotrypsin\/Hap OS=Akkermansia muciniphila CAG:154 GN=BN502_00546 PE=4 SV=1: Trypsin_2: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_63250 serine protease : HtrA2 peptidase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1243 PE=4 SV=1: Trypsin_2: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_78250 unnamed protein product; BLAST_uniprot: no_hits\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_82080 serine protease : Putative periplasmic serine endoprotease DegP-like OS=alpha proteobacterium Q-1 GN=htrA PE=4 SV=1: PDZ_2\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SOIL9_07830 atp-dependent zinc metallopeptidase : AAA ATPase central domain protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2519 PE=4 SV=1: AAA\tK03798 ftsH; cell division protease FtsH [EC:3.4.24.-]" }, { "name":"SOIL9_11750 atp-dependent metalloprotease : ATP-dependent metalloprotease FtsH OS=Myxococcus stipitatus (strain DSM 14675 \/ JCM 12634 \/ Mx s8) GN=MYSTI_03370 PE=4 SV=1: AAA: Peptidase_M41\tK03798 ftsH; cell division protease FtsH [EC:3.4.24.-]" }, { "name":"SOIL9_38840 cell division protein : ATP-dependent zinc metalloprotease FtsH OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=ftsH PE=3 SV=1: FtsH_ext: AAA: Peptidase_M41\tK03798 ftsH; cell division protease FtsH [EC:3.4.24.-]" }, { "name":"SOIL9_57030 aaa atpase central domain-containing protein : Uncharacterized protein OS=Sorangium cellulosum So0157-2 GN=SCE1572_01045 PE=4 SV=1: AAA\tK03798 ftsH; cell division protease FtsH [EC:3.4.24.-]" }, { "name":"SOIL9_23000 atp synthase subunit a : ATP synthase subunit a OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=atpB PE=3 SV=1: ATP-synt_A\tK02108 ATPF0A; F-type H+-transporting ATPase subunit a" }, { "name":"SOIL9_02350 Methyltransferase-16 OS=Gemmatimonadetes bacterium KBS708 GN=J421_0696 PE=4 SV=1: Methyltransf_16\tK23151 METTL23; methyltransferase-like protein 23 [EC:2.1.1.-]" }, { "name":"SOIL9_12860 unnamed protein product; BLAST_uniprot: no_hits\tK23349 dmsD; putative dimethyl sulfoxide reductase chaperone" }, { "name":"SOIL9_39940 serine protease : KerA OS=Streptomyces sp. Mg1 GN=SSAG_05201 PE=4 SV=1: Peptidase_S8\tK01342 aprE; subtilisin [EC:3.4.21.62]" }, { "name":"SOIL9_75020 peptidase s8 : Peptidase S8 and S53 subtilisin kexin sedolisin OS=Shewanella woodyi (strain ATCC 51908 \/ MS32) GN=Swoo_0647 PE=3 SV=1: Peptidase_S8: P_proprotein\tK14645 K14645; serine protease [EC:3.4.21.-]" }, { "name":"SOIL9_12550 peptidyl-prolyl cis-trans isomerase : Peptidyl-prolyl cis-trans isomerase, cyclophilin type OS=Fimbriimonas ginsengisoli Gsoil 348 GN=OP10G_4301 PE=3 SV=1: Pro_isomerase\tK03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]" }, { "name":"SOIL9_70280 fkbp-type peptidyl-prolyl cis-trans isomerase family protein : Peptidyl-prolyl cis-trans isomerase OS=Burkholderia pseudomallei 1106b GN=BURPS1106B_2704 PE=4 SV=1: FKBP_C\tK03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]" }, { "name":"SOIL9_82120 peptidylprolyl isomerase : Peptidyl-prolyl cis-trans isomerase OS=Laribacter hongkongensis (strain HLHK9) GN=fkpA PE=4 SV=1: FKBP_C\tK03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]" }, { "name":"SOIL9_10670 -type peptidyl-prolyl cis-trans isomerase : Peptidylprolyl isomerase OS=uncultured planctomycete GN=HGMM_F12C05C36 PE=4 SV=1: Rotamase\tK03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]" }, { "name":"SOIL9_56470 -type peptidyl-prolyl cis-trans isomerase : PpiC-type peptidyl-prolyl cis-trans isomerase OS=Geobacter lovleyi (strain ATCC BAA-1151 \/ DSM 17278 \/ SZ) GN=Glov_0698 PE=4 SV=1: Rotamase_2\tK03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]" }, { "name":"SOIL9_08640 thioredoxin : Thioredoxin OS=Moorea producens 3L GN=LYNGBM3L_14230 PE=3 SV=1: Thioredoxin\tK03671 TXN; thioredoxin" }, { "name":"SOIL9_30940 thioredoxin : Thioredoxin OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7004 PE=4 SV=1: Thioredoxin\tK03671 TXN; thioredoxin" }, { "name":"SOIL9_64360 thioredoxin : Thioredoxin OS=Thermocrinis ruber DSM 12173 GN=THERU_00335 PE=3 SV=1: Thioredoxin\tK03671 TXN; thioredoxin" }, { "name":"SOIL9_21950 thioredoxin : Thioredoxin OS=Maricaulis maris (strain MCS10) GN=Mmar10_2938 PE=4 SV=1: Thioredoxin: TPR_20\tK05838 ybbN; putative thioredoxin" } ] }, { "name":"04131 Membrane trafficking [BR:gms04131]", "children":[ { "name":"SOIL9_72600 nucleoside diphosphate kinase : Nucleoside diphosphate kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ndk PE=3 SV=1: NDK\tK00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]" }, { "name":"SOIL9_73140 Flotillin-like protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_05480 PE=4 SV=1: Band_7\tK07192 FLOT; flotillin" }, { "name":"SOIL9_11620 glyceraldehyde-3-phosphate dehydrogenase : Glyceraldehyde-3-phosphate dehydrogenase OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_1890 PE=3 SV=1: Gp_dh_N: Gp_dh_C\tK00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]" }, { "name":"SOIL9_58040 pyruvate kinase : Pyruvate kinase OS=Hyalangium minutum GN=DB31_5931 PE=3 SV=1: PK: PK_C\tK00873 PK; pyruvate kinase [EC:2.7.1.40]" }, { "name":"SOIL9_59030 heat shock protein 90 : Chaperone protein HtpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1: HATPase_c_3: HSP90\tK04079 HSP90A; molecular chaperone HtpG" } ] }, { "name":"04121 Ubiquitin system [BR:gms04121]" }, { "name":"03051 Proteasome [BR:gms03051]", "children":[ { "name":"SOIL9_59030 heat shock protein 90 : Chaperone protein HtpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1: HATPase_c_3: HSP90\tK04079 HSP90A; molecular chaperone HtpG" } ] }, { "name":"03032 DNA replication proteins [BR:gms03032]", "children":[ { "name":"SOIL9_00270 ribonuclease h : Ribonuclease HI OS=Thermoproteus tenax (strain ATCC 35583 \/ NBRC 100435 \/ JCM 9277 \/ Kra 1) GN=rnhA PE=4 SV=1: RVT_3\tK03469 rnhA; ribonuclease HI [EC:3.1.26.4]" }, { "name":"SOIL9_25960 ribonuclease h : Ribonuclease H OS=Pseudonocardia dioxanivorans (strain ATCC 55486 \/ DSM 44775 \/ JCM 13855 \/ CB1190) GN=Psed_2488 PE=4 SV=1: RNase_H\tK03469 rnhA; ribonuclease HI [EC:3.1.26.4]" }, { "name":"SOIL9_77480 ribonuclease h : Ribonuclease HI OS=Thermoproteus tenax (strain ATCC 35583 \/ NBRC 100435 \/ JCM 9277 \/ Kra 1) GN=rnhA PE=4 SV=1: RVT_3\tK03469 rnhA; ribonuclease HI [EC:3.1.26.4]" }, { "name":"SOIL9_80170 unnamed protein product; BLAST_uniprot: no_hits\tK03469 rnhA; ribonuclease HI [EC:3.1.26.4]" }, { "name":"SOIL9_02970 histone family protein dna-binding protein : Histone family protein DNA-binding protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1271 PE=3 SV=1: Bac_DNA_binding\tK05788 ihfB; integration host factor subunit beta" }, { "name":"SOIL9_70140 chromosomal replication initiator protein : Chromosomal replication initiator protein dnaA (Fragment) OS=Micromonospora sp. M42 GN=MCBG_03933 PE=3 SV=1: Bac_DnaA: Bac_DnaA_C\tK02313 dnaA; chromosomal replication initiator protein" }, { "name":"SOIL9_72520 chromosomal replication initiator protein : Chromosomal replication initiator protein dnaA OS=uncultured Acidobacteria bacterium A2 PE=3 SV=1: Bac_DnaA: Bac_DnaA_C\tK02313 dnaA; chromosomal replication initiator protein" }, { "name":"SOIL9_36090 replicative dna helicase : Replicative DNA helicase OS=Thermanaerovibrio velox DSM 12556 GN=TheveDRAFT_1143 PE=4 SV=1: DnaB: DnaB_C\tK02314 dnaB; replicative DNA helicase [EC:5.6.2.3]" }, { "name":"SOIL9_40730 replicative dna helicase : Replicative DNA helicase OS=Rhodopirellula europaea 6C GN=RE6C_00217 PE=4 SV=1: DnaB: DnaB_C\tK02314 dnaB; replicative DNA helicase [EC:5.6.2.3]" }, { "name":"SOIL9_49610 replicative dna helicase : Probable replicative DNA helicase OS=Rhodopirellula baltica (strain SH1) GN=dnaB PE=4 SV=1: DnaB_C\tK02314 dnaB; replicative DNA helicase [EC:5.6.2.3]" }, { "name":"SOIL9_55530 replicative dna helicase : Replicative DNA helicase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0836 PE=4 SV=1: DnaB: DnaB_C\tK02314 dnaB; replicative DNA helicase [EC:5.6.2.3]" }, { "name":"SOIL9_58610 replicative dna helicase : Replicative DNA helicase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0836 PE=4 SV=1: DnaB: DnaB_C\tK02314 dnaB; replicative DNA helicase [EC:5.6.2.3]" }, { "name":"SOIL9_03960 dna primase : DNA primase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0213 PE=3 SV=1: zf-CHC2: Toprim_N: Toprim_4\tK02316 dnaG; DNA primase [EC:2.7.7.101]" }, { "name":"SOIL9_64920 single-stranded dna-binding protein : Single-stranded DNA-binding protein OS=Phycisphaera mikurensis (strain NBRC 102666 \/ KCTC 22515 \/ FYK2301M01) GN=ssb PE=4 SV=1: SSB\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SOIL9_64040 dna polymerase iii subunit alpha : DNA-directed DNA polymerase OS=Rhodopirellula baltica (strain SH1) GN=dnaE PE=4 SV=1: PHP: DNA_pol3_alpha: HHH_6: tRNA_anti-codon\tK02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]" }, { "name":"SOIL9_70130 dna polymerase iii subunit beta : DNA polymerase III subunit beta OS=Rhodopirellula baltica SWK14 GN=RBSWK_02256 PE=4 SV=1: DNA_pol3_beta: DNA_pol3_beta_2: DNA_pol3_beta_3\tK02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]" }, { "name":"SOIL9_47050 dna polymerase iii subunit delta : DNA polymerase III, delta subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2977 PE=4 SV=1: DNA_pol3_delta\tK02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]" }, { "name":"SOIL9_17600 dna polymerase iii subunit delta : DNA polymerase III, delta'' subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4806 PE=4 SV=1: DNA_pol3_delta2\tK02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]" }, { "name":"SOIL9_06100 exonuclease : Exonuclease OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_2401 PE=4 SV=1: RNase_T\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]" }, { "name":"SOIL9_28290 dna polymerase iii subunit gamma tau : DNA polymerase III gamma and tau subunits OS=Blastopirellula marina DSM 3645 GN=DSM3645_28667 PE=4 SV=1: DNA_pol3_delta2: DNA_pol3_gamma3\tK02343 dnaX; DNA polymerase III subunit gamma\/tau [EC:2.7.7.7]" }, { "name":"SOIL9_21510 dna polymerase i : DNA polymerase I OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3785 PE=3 SV=1: 5_3_exonuc_N: 5_3_exonuc: DNA_pol_A_exo1: DNA_pol_A\tK02335 polA; DNA polymerase I [EC:2.7.7.7]" }, { "name":"SOIL9_72640 nad-dependent dna ligase : DNA ligase OS=uncultured bacterium GN=ligA PE=3 SV=1: DNA_ligase_aden: DNA_ligase_OB: HHH_2: BRCT\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]" }, { "name":"SOIL9_25770 d12 class n6 adenine-specific dna methyltransferase : D12 class N6 adenine-specific DNA methyltransferase OS=Rhodopirellula sallentina SM41 GN=RSSM_03350 PE=4 SV=1: MethyltransfD12\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]" }, { "name":"SOIL9_25780 d12 class n6 adenine-specific dna methyltransferase : D12 class N6 adenine-specific DNA methyltransferase OS=Rhodopirellula sallentina SM41 GN=RSSM_03350 PE=4 SV=1: MethyltransfD12\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]" }, { "name":"SOIL9_78330 d12 class n6 adenine-specific dna methyltransferase : D12 class N6 adenine-specific DNA methyltransferase OS=Rhodopirellula sallentina SM41 GN=RSSM_03350 PE=4 SV=1: MethyltransfD12: MethyltransfD12\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]" }, { "name":"SOIL9_30690 dna topoisomerase : DNA topoisomerase (ATP-hydrolyzing) OS=uncultured planctomycete GN=HGMM_F22C11C08 PE=4 SV=1: DNA_topoisoIV: DNA_gyraseA_C: DNA_gyraseA_C: DNA_gyraseA_C\tK02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]" }, { "name":"SOIL9_74840 dna gyrase subunit a : DNA gyrase subunit A OS=Rhodopirellula europaea 6C GN=gyrA PE=3 SV=1: DNA_topoisoIV: DNA_gyraseA_C: DNA_gyraseA_C: DNA_gyraseA_C: DNA_gyraseA_C: DNA_gyraseA_C: DNA_gyraseA_C\tK02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]" }, { "name":"SOIL9_23990 dna gyrase subunit b : DNA gyrase subunit B OS=Archaeoglobus profundus (strain DSM 5631 \/ JCM 9629 \/ NBRC 100127 \/ Av18) GN=gyrB PE=3 SV=1: DNA_gyraseB\tK02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]" }, { "name":"SOIL9_30680 dna topoisomerase iv subunit b : DNA gyrase subunit B OS=uncultured planctomycete GN=HGMM_F22C11C07 PE=3 SV=1: HATPase_c: DNA_gyraseB: Toprim: DNA_gyraseB_C\tK02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]" }, { "name":"SOIL9_70110 dna gyrase subunit b : DNA gyrase subunit B OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=gyrB PE=3 SV=1: HATPase_c: DNA_gyraseB: Toprim: DNA_gyraseB_C\tK02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]" }, { "name":"SOIL9_40010 dna topoisomerase i : DNA topoisomerase 1 OS=uncultured planctomycete GN=topA PE=3 SV=1: Toprim: Topoisom_bac: zf-C4_Topoisom: zf-C4_Topoisom: zf-C4_Topoisom: zf-C4_Topoisom\tK03168 topA; DNA topoisomerase I [EC:5.6.2.1]" }, { "name":"SOIL9_77910 dna topoisomerase : DNA topoisomerase OS=Caulobacter segnis (strain ATCC 21756 \/ DSM 7131 \/ JCM 7823 \/ NBRC 15250 \/ LMG 17158 \/ TK0059) GN=Cseg_3110 PE=4 SV=1: Topoisom_I\tK03168 topA; DNA topoisomerase I [EC:5.6.2.1]" } ] }, { "name":"03036 Chromosome and associated proteins [BR:gms03036]", "children":[ { "name":"SOIL9_69120 tpr repeat-containing protein : TPR repeat-containing protein OS=Thioploca ingrica GN=THII_3940 PE=4 SV=1: TPR_11: TPR_11: TPR_2: TPR_11: TPR_1: Glyco_transf_41: Glyco_transf_41\tK09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]" }, { "name":"SOIL9_21120 Deacetylase OS=Planctomyces maris DSM 8797 GN=PM8797T_03334 PE=4 SV=1: Hist_deacetyl\tK11418 HDAC11; histone deacetylase 11 [EC:3.5.1.98]" }, { "name":"SOIL9_07640 ribonuclease iii : Ribonuclease 3 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rnc PE=3 SV=1: Ribonucleas_3_3: dsrm\tK03685 rnc; ribonuclease III [EC:3.1.26.3]" }, { "name":"SOIL9_73140 Flotillin-like protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_05480 PE=4 SV=1: Band_7\tK07192 FLOT; flotillin" }, { "name":"SOIL9_02970 histone family protein dna-binding protein : Histone family protein DNA-binding protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1271 PE=3 SV=1: Bac_DNA_binding\tK05788 ihfB; integration host factor subunit beta" }, { "name":"SOIL9_00820 molecular chaperone : Heat shock protein DnaJ-like protein OS=Planctomyces maris DSM 8797 GN=PM8797T_24486 PE=4 SV=1: DnaJ: CTDII\tK05516 cbpA; curved DNA-binding protein" }, { "name":"SOIL9_70140 chromosomal replication initiator protein : Chromosomal replication initiator protein dnaA (Fragment) OS=Micromonospora sp. M42 GN=MCBG_03933 PE=3 SV=1: Bac_DnaA: Bac_DnaA_C\tK02313 dnaA; chromosomal replication initiator protein" }, { "name":"SOIL9_72520 chromosomal replication initiator protein : Chromosomal replication initiator protein dnaA OS=uncultured Acidobacteria bacterium A2 PE=3 SV=1: Bac_DnaA: Bac_DnaA_C\tK02313 dnaA; chromosomal replication initiator protein" }, { "name":"SOIL9_75450 ferritin dps family protein : Ferritin Dps family protein OS=Chloroflexus aggregans (strain MD-66 \/ DSM 9485) GN=Cagg_3484 PE=3 SV=1: Ferritin\tK04047 dps; starvation-inducible DNA-binding protein" }, { "name":"SOIL9_76690 chromosome segregation protein smc : Chromosome partition protein Smc OS=Rhodopirellula sallentina SM41 GN=smc PE=3 SV=1: SMC_N: SMC_hinge\tK03529 smc; chromosome segregation protein" }, { "name":"SOIL9_83630 segregation and condensation protein a : Chromosome segregation and condensation protein ScpA OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1683 PE=3 SV=1: ScpA_ScpB\tK05896 scpA; segregation and condensation protein A" }, { "name":"SOIL9_18400 segregation and condensation protein b : Chromosome segregation and condensation protein, ScpB OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_0391 PE=4 SV=1: DUF387\tK06024 scpB; segregation and condensation protein B" }, { "name":"SOIL9_70000 segregation and condensation protein b : Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_09562 PE=4 SV=1: DUF387\tK06024 scpB; segregation and condensation protein B" }, { "name":"SOIL9_76780 stage iii sporulation protein e : Hypothetical conserved protein OS=uncultured planctomycete GN=HGMM_F12C05C07 PE=4 SV=1: FtsK_SpoIIIE: Ftsk_gamma\tK03466 ftsK; DNA segregation ATPase FtsK\/SpoIIIE, S-DNA-T family" }, { "name":"SOIL9_85640 n-acetylmuramoyl-l-alanine amidase : N-acetylmuramoyl-L-alanine amidase OS=Clostridium sp. CAG:451 GN=BN663_00049 PE=4 SV=1: Amidase_3\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SOIL9_18810 rnd family efflux transporter mfp subunit : RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0100 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_23810 rnd family efflux transporter mfp subunit : Efflux transporter, RND family, MFP subunit OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1220 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_26910 rnd transporter mfp subunit : Efflux transporter, RND family, MFP subunit OS=Burkholderia sp. (strain CCGE1002) GN=BC1002_5413 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_66350 rnd family efflux transporter mfp subunit : RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1026 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_74170 hemolysin d : Putative Co\/Zn\/Cd efflux system membrane fusion protein OS=Sandaracinus amylolyticus GN=DB32_2325 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_43550 ParA protein OS=Rhodopirellula europaea 6C GN=RE6C_04424 PE=4 SV=1: CbiA\tK03496 parA; chromosome partitioning protein" }, { "name":"SOIL9_61090 ParA protein OS=Rhodopirellula europaea 6C GN=RE6C_04424 PE=4 SV=1: CbiA\tK03496 parA; chromosome partitioning protein" }, { "name":"SOIL9_63490 Partitioning or sporulation protein ParA OS=uncultured planctomycete GN=HGMM_F01A04C17 PE=4 SV=1: CbiA\tK03496 parA; chromosome partitioning protein" }, { "name":"SOIL9_81300 ParA protein OS=Rhodopirellula europaea 6C GN=RE6C_04424 PE=4 SV=1: CbiA\tK03496 parA; chromosome partitioning protein" }, { "name":"SOIL9_42960 ParBc, ParB-like nuclease domain OS=Blastopirellula marina DSM 3645 GN=DSM3645_27843 PE=4 SV=1: ParBc\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"SOIL9_48260 chromosome partitioning protein : ParBc, ParB-like nuclease domain OS=Blastopirellula marina DSM 3645 GN=DSM3645_27843 PE=4 SV=1: ParBc\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"SOIL9_60400 chromosome partitioning protein : ParBc, ParB-like nuclease domain OS=Symbiobacterium thermophilum (strain T \/ IAM 14863) GN=STH3332 PE=4 SV=1: ParBc\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"SOIL9_69650 parb-like partition protein : ParB-like partition protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1718 PE=4 SV=1: ParBc\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"SOIL9_81950 chromosome partitioning protein : ParB-like partition protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7661 PE=4 SV=1: ParBc\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"SOIL9_27810 trna uridine 5-carboxymethylaminomethyl modification protein : tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=mnmG PE=3 SV=1: GIDA: GIDA_assoc_3\tK03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme" }, { "name":"SOIL9_40040 tyrosine recombinase : Tyrosine recombinase XerC OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=xerC PE=3 SV=1: Phage_int_SAM_1: Phage_integrase\tK03733 xerC; integrase\/recombinase XerC" }, { "name":"SOIL9_35260 integrase : Site-specific recombinase XerD OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7582 PE=4 SV=1: Phage_int_SAM_1: Phage_integrase\tK04763 xerD; integrase\/recombinase XerD" }, { "name":"SOIL9_35270 integrase : Integrase\/recombinase OS=Aromatoleum aromaticum (strain EbN1) GN=int PE=4 SV=1: Phage_int_SAM_4: Phage_integrase\tK04763 xerD; integrase\/recombinase XerD" }, { "name":"SOIL9_35780 integrase-recombinase protein : Integrase-recombinase protein OS=Rhodopirellula sallentina SM41 GN=RSSM_04495 PE=4 SV=1: Phage_integrase\tK04763 xerD; integrase\/recombinase XerD" }, { "name":"SOIL9_60460 integrase : Site-specific recombinase XerD OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7675 PE=4 SV=1: Phage_int_SAM_1: Phage_integrase\tK04763 xerD; integrase\/recombinase XerD" }, { "name":"SOIL9_63480 tyrosine recombinase : Tyrosine recombinase XerC OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=xerC PE=3 SV=1: Phage_int_SAM_1: Phage_integrase\tK04763 xerD; integrase\/recombinase XerD" }, { "name":"SOIL9_28740 atp-binding protein : Cobyrinic acid ac-diamide synthase OS=Rhodothermus marinus (strain ATCC 43812 \/ DSM 4252 \/ R-10) GN=Rmar_2325 PE=4 SV=1: AAA_31: ParA\tK03593 mrp; ATP-binding protein involved in chromosome partitioning" } ] }, { "name":"03400 DNA repair and recombination proteins [BR:gms03400]", "children":[ { "name":"SOIL9_23140 methylated-dna--protein-cysteine methyltransferase : Methylated-DNA--protein-cysteine methyltransferase OS=Candidatus Caedibacter acanthamoebae GN=IM40_03390 PE=3 SV=1: Methyltransf_1N: DNA_binding_1\tK00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]" }, { "name":"SOIL9_34680 Putative deoxyribodipyrimidine photo-lyase OS=Leptospira wolbachii serovar Codice str. CDC GN=LEP1GSC195_0155 PE=4 SV=1: FAD_binding_7\tK01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]" }, { "name":"SOIL9_41720 uracil-dna glycosylase : Uracil-DNA glycosylase OS=Deinococcus deserti (strain VCD115 \/ DSM 17065 \/ LMG 22923) GN=ung PE=3 SV=1: UDG\tK03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]" }, { "name":"SOIL9_79480 a g-specific adenine glycosylase : A\/G-specific adenine glycosylase OS=Blastopirellula marina DSM 3645 GN=DSM3645_11537 PE=4 SV=1: HhH-GPD: NUDIX_4\tK03575 mutY; A\/G-specific adenine glycosylase [EC:3.2.2.31]" }, { "name":"SOIL9_59400 dna lyase : Endonuclease III OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD0258 PE=3 SV=1: HhH-GPD\tK10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]" }, { "name":"SOIL9_79690 endonuclease iii : Endonuclease III OS=Synechococcus sp. (strain JA-3-3Ab) GN=nth PE=3 SV=1: HhH-GPD: HHH: EndIII_4Fe-2S\tK10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]" }, { "name":"SOIL9_63810 type iii restriction protein res subunit : DNA\/RNA helicase, superfamily II OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6347 PE=4 SV=1: Helicase_C_3: ResIII: Helicase_C\tK10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]" }, { "name":"SOIL9_20990 -dihydro-8-oxoguanine-triphosphatase : 7,8-dihydro-8-oxoguanine-triphosphatase OS=Lysobacter arseniciresistens ZS79 GN=N799_12410 PE=4 SV=1: NUDIX\tK03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]" }, { "name":"SOIL9_85710 nudix hydrolase : Nudix hydrolase OS=Microscilla marina ATCC 23134 GN=M23134_00617 PE=3 SV=1: NUDIX\tK03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]" }, { "name":"SOIL9_54940 family transcriptional regulator : Transcriptional regulator, AraC family OS=Ktedonobacter racemifer DSM 44963 GN=Krac_3207 PE=4 SV=1: HTH_18: DNA_binding_1\tK10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response \/ methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]" }, { "name":"SOIL9_16430 dna glycosylase : TDG\/mug DNA glycosylase family protein OS=Amycolatopsis methanolica 239 GN=mug PE=4 SV=1: UDG\tK03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]" }, { "name":"SOIL9_59510 uracil-dna glycosylase : DNA polymerase, bacteriophage-type OS=Blastopirellula marina DSM 3645 GN=DSM3645_10402 PE=4 SV=1: UDG\tK21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]" }, { "name":"SOIL9_23130 dna-3-methyladenine glycosylase : 3-methyladenine DNA glycosylase\/8-oxoguanine DNA glycosylase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2693 PE=4 SV=1: AlkA_N: HhH-GPD\tK01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]" }, { "name":"SOIL9_73570 dna-3-methyladenine glycosylase ii : HhH-GPD superfamily base excision DNA repair protein OS=Candidatus Nitrososphaera evergladensis SR1 GN=NTE_03049 PE=4 SV=1: HhH-GPD\tK01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]" }, { "name":"SOIL9_73210 formamidopyrimidine-dna glycosylase : Formamidopyrimidine-DNA glycosylase OS=Pseudogulbenkiania ferrooxidans 2002 GN=mutM PE=3 SV=1: Fapy_DNA_glyco: H2TH: zf-FPG_IleRS\tK10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]" }, { "name":"SOIL9_22160 apurinic endonuclease apn1 : Probable endonuclease 4 OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=nfo PE=3 SV=1: AP_endonuc_2\tK01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]" }, { "name":"SOIL9_66730 endonuclease v : Endonuclease V OS=Pelobacter carbinolicus (strain DSM 2380 \/ Gra Bd 1) GN=nfi PE=3 SV=1: Endonuclease_5\tK05982 nfi; deoxyribonuclease V [EC:3.1.21.7]" }, { "name":"SOIL9_31620 single-stranded-dna-specific exonuclease : Exonuclease RecJ OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4350 PE=4 SV=1: DHH: DHHA1\tK07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]" }, { "name":"SOIL9_72640 nad-dependent dna ligase : DNA ligase OS=uncultured bacterium GN=ligA PE=3 SV=1: DNA_ligase_aden: DNA_ligase_OB: HHH_2: BRCT\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]" }, { "name":"SOIL9_21510 dna polymerase i : DNA polymerase I OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3785 PE=3 SV=1: 5_3_exonuc_N: 5_3_exonuc: DNA_pol_A_exo1: DNA_pol_A\tK02335 polA; DNA polymerase I [EC:2.7.7.7]" }, { "name":"SOIL9_27680 excinuclease abc subunit a : Exinuclease ABC subunit A OS=Blastopirellula marina DSM 3645 GN=DSM3645_11691 PE=3 SV=1: ABC_tran: ABC_tran\tK03701 uvrA; excinuclease ABC subunit A" }, { "name":"SOIL9_48650 excinuclease abc subunit a : Excinuclease ABC, A subunit OS=Microvirga lotononidis GN=MicloDRAFT_00060470 PE=4 SV=1: ABC_tran\tK03701 uvrA; excinuclease ABC subunit A" }, { "name":"SOIL9_67580 excinuclease abc subunit b : UvrABC system protein B OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=uvrB PE=3 SV=1: ResIII: Helicase_C: UvrB: UVR\tK03702 uvrB; excinuclease ABC subunit B" }, { "name":"SOIL9_20530 excinuclease abc subunit c : Excinuclease ABC subunit C OS=Rhodopirellula maiorica SM1 GN=RMSM_06429 PE=4 SV=1: GIY-YIG: UVR\tK03703 uvrC; excinuclease ABC subunit C" }, { "name":"SOIL9_30550 excinuclease abc subunit c : UvrABC system protein C OS=Blastopirellula marina DSM 3645 GN=DSM3645_06771 PE=4 SV=1: GIY-YIG: UVR: UvrC_HhH_N\tK03703 uvrC; excinuclease ABC subunit C" }, { "name":"SOIL9_07710 atp-dependent dna helicase : DNA helicase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5592 PE=4 SV=1: UvrD-helicase: UvrD_C\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]" }, { "name":"SOIL9_11240 dna-directed rna polymerase subunit beta : DNA-directed RNA polymerase subunit beta OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rpoB PE=3 SV=1: RNA_pol_Rpb2_1: RNA_pol_Rpb2_2: RNA_pol_Rpb2_3: RNA_pol_Rpb2_45: RNA_pol_Rpb2_6: RNA_pol_Rpb2_7\tK03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]" }, { "name":"SOIL9_11250 dna-directed rna polymerase subunit beta : DNA-directed RNA polymerase subunit beta' OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rpoC PE=3 SV=1: RNA_pol_Rpb1_1: RNA_pol_Rpb1_2: RNA_pol_Rpb1_3: RNA_pol_Rpb1_4: RNA_pol_Rpb1_5\tK03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]" }, { "name":"SOIL9_50350 rna polymerase alpha subunit domain protein : DNA-directed RNA polymerase subunit alpha (Fragment) OS=uncultured planctomycete GN=HGMM_F13D05C26 PE=4 SV=1: TPR_11: TPR_2: RNA_pol_A_CTD: RNA_pol_A_CTD\tK03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]" }, { "name":"SOIL9_84830 dna-directed rna polymerase subunit alpha : DNA-directed RNA polymerase subunit alpha OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rpoA PE=3 SV=1: RNA_pol_L: RNA_pol_A_bac: RNA_pol_A_CTD\tK03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]" }, { "name":"SOIL9_59760 dna-directed rna polymerase subunit omega : DNA-directed RNA polymerase subunit omega OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=rpoZ PE=3 SV=1: RNA_pol_Rpb6\tK03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]" }, { "name":"SOIL9_82110 transcription-repair coupling factor : Transcription-repair-coupling factor OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=mfd PE=3 SV=1: CarD_CdnL_TRCF: DEAD: Helicase_C: TRCF\tK03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]" }, { "name":"SOIL9_31790 dna mismatch repair protein : DNA mismatch repair protein MutS OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=mutS PE=3 SV=1: MutS_I: MutS_II: MutS_III: MutS_IV: MutS_V\tK03555 mutS; DNA mismatch repair protein MutS" }, { "name":"SOIL9_17030 2 family protein : Mismatch repair ATPase (MutS family) OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2874 PE=3 SV=1: MutS_III: MutS_V\tK07456 mutS2; DNA mismatch repair protein MutS2" }, { "name":"SOIL9_65160 dna mismatch repair protein : DNA mismatch repair protein MutL OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=mutL PE=3 SV=1: HATPase_c_3: DNA_mis_repair: MutL_C\tK03572 mutL; DNA mismatch repair protein MutL" }, { "name":"SOIL9_66090 exodeoxyribonuclease vii large subunit : Exodeoxyribonuclease 7 large subunit OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=xseA PE=3 SV=1: tRNA_anti_2: Exonuc_VII_L: Exonuc_VII_L\tK03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]" }, { "name":"SOIL9_66100 exodeoxyribonuclease vii small subunit : Exodeoxyribonuclease 7 small subunit OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=xseB PE=3 SV=1: Exonuc_VII_S\tK03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]" }, { "name":"SOIL9_64040 dna polymerase iii subunit alpha : DNA-directed DNA polymerase OS=Rhodopirellula baltica (strain SH1) GN=dnaE PE=4 SV=1: PHP: DNA_pol3_alpha: HHH_6: tRNA_anti-codon\tK02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]" }, { "name":"SOIL9_70130 dna polymerase iii subunit beta : DNA polymerase III subunit beta OS=Rhodopirellula baltica SWK14 GN=RBSWK_02256 PE=4 SV=1: DNA_pol3_beta: DNA_pol3_beta_2: DNA_pol3_beta_3\tK02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]" }, { "name":"SOIL9_47050 dna polymerase iii subunit delta : DNA polymerase III, delta subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2977 PE=4 SV=1: DNA_pol3_delta\tK02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]" }, { "name":"SOIL9_17600 dna polymerase iii subunit delta : DNA polymerase III, delta'' subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4806 PE=4 SV=1: DNA_pol3_delta2\tK02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]" }, { "name":"SOIL9_06100 exonuclease : Exonuclease OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_2401 PE=4 SV=1: RNase_T\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]" }, { "name":"SOIL9_28290 dna polymerase iii subunit gamma tau : DNA polymerase III gamma and tau subunits OS=Blastopirellula marina DSM 3645 GN=DSM3645_28667 PE=4 SV=1: DNA_pol3_delta2: DNA_pol3_gamma3\tK02343 dnaX; DNA polymerase III subunit gamma\/tau [EC:2.7.7.7]" }, { "name":"SOIL9_64920 single-stranded dna-binding protein : Single-stranded DNA-binding protein OS=Phycisphaera mikurensis (strain NBRC 102666 \/ KCTC 22515 \/ FYK2301M01) GN=ssb PE=4 SV=1: SSB\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SOIL9_25770 d12 class n6 adenine-specific dna methyltransferase : D12 class N6 adenine-specific DNA methyltransferase OS=Rhodopirellula sallentina SM41 GN=RSSM_03350 PE=4 SV=1: MethyltransfD12\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]" }, { "name":"SOIL9_25780 d12 class n6 adenine-specific dna methyltransferase : D12 class N6 adenine-specific DNA methyltransferase OS=Rhodopirellula sallentina SM41 GN=RSSM_03350 PE=4 SV=1: MethyltransfD12\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]" }, { "name":"SOIL9_78330 d12 class n6 adenine-specific dna methyltransferase : D12 class N6 adenine-specific DNA methyltransferase OS=Rhodopirellula sallentina SM41 GN=RSSM_03350 PE=4 SV=1: MethyltransfD12: MethyltransfD12\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]" }, { "name":"SOIL9_34340 dna helicase : RecD\/TraA-family helicase OS=Octadecabacter antarcticus 307 GN=OAN307_c08020 PE=4 SV=1: HHH_4: AAA_30: UvrD_C_2\tK03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]" }, { "name":"SOIL9_65450 recombinase : Protein RecA OS=uncultured planctomycete GN=recA PE=3 SV=1: RecA\tK03553 recA; recombination protein RecA" }, { "name":"SOIL9_69880 holliday junction dna helicase ruva : Holliday junction ATP-dependent DNA helicase RuvA OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=ruvA PE=3 SV=1\tK03550 ruvA; holliday junction DNA helicase RuvA" }, { "name":"SOIL9_75800 dna polymerase iii : DNA polymerase beta family protein OS=Planctomyces maris DSM 8797 GN=PM8797T_21363 PE=4 SV=1: HHH_8\tK03550 ruvA; holliday junction DNA helicase RuvA" }, { "name":"SOIL9_69900 holliday junction dna helicase : Holliday junction ATP-dependent DNA helicase RuvB OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ruvB PE=3 SV=1: RuvB_N: RuvB_C\tK03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]" }, { "name":"SOIL9_69870 crossover junction endodeoxyribonuclease : Crossover junction endodeoxyribonuclease RuvC OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=ruvC PE=3 SV=1: RuvC\tK01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]" }, { "name":"SOIL9_50540 primosomal protein n : Primosomal protein N OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2695 PE=4 SV=1: DEAD: Helicase_C\tK04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]" }, { "name":"SOIL9_41840 SMC domain protein OS=bacterium UASB14 GN=U14_05899 PE=4 SV=1: AAA_23\tK03546 sbcC; DNA repair protein SbcC\/Rad50" }, { "name":"SOIL9_41830 nuclease subunit d : Nuclease SbcCD, D subunit OS=gamma proteobacterium NOR5-3 GN=NOR53_2663 PE=4 SV=1: Metallophos\tK03547 sbcD; DNA repair protein SbcD\/Mre11" }, { "name":"SOIL9_31030 dna repair protein : DNA repair protein RecO OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=recO PE=3 SV=1: RecO_N: RecO_C\tK03584 recO; DNA repair protein RecO (recombination protein O)" }, { "name":"SOIL9_28260 recombination protein : Recombination protein RecR OS=Planctomyces maris DSM 8797 GN=recR PE=3 SV=1: HHH: RecR: Toprim_4\tK06187 recR; recombination protein RecR" }, { "name":"SOIL9_03900 dna repair protein : DNA repair protein RecN OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2126 PE=3 SV=1: SMC_N\tK03631 recN; DNA repair protein RecN (Recombination protein N)" }, { "name":"SOIL9_13930 Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0973 PE=4 SV=1\tK03554 rdgC; recombination associated protein RdgC" }, { "name":"SOIL9_41170 CRISPR-associated endonuclease Cas1 OS=Hydrocarboniphaga effusa AP103 GN=cas1 PE=3 SV=1: Cas_Cas4: Cas_Cas1\tK15342 cas1; CRISP-associated protein Cas1" }, { "name":"SOIL9_30690 dna topoisomerase : DNA topoisomerase (ATP-hydrolyzing) OS=uncultured planctomycete GN=HGMM_F22C11C08 PE=4 SV=1: DNA_topoisoIV: DNA_gyraseA_C: DNA_gyraseA_C: DNA_gyraseA_C\tK02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]" }, { "name":"SOIL9_74840 dna gyrase subunit a : DNA gyrase subunit A OS=Rhodopirellula europaea 6C GN=gyrA PE=3 SV=1: DNA_topoisoIV: DNA_gyraseA_C: DNA_gyraseA_C: DNA_gyraseA_C: DNA_gyraseA_C: DNA_gyraseA_C: DNA_gyraseA_C\tK02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]" }, { "name":"SOIL9_23990 dna gyrase subunit b : DNA gyrase subunit B OS=Archaeoglobus profundus (strain DSM 5631 \/ JCM 9629 \/ NBRC 100127 \/ Av18) GN=gyrB PE=3 SV=1: DNA_gyraseB\tK02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]" }, { "name":"SOIL9_30680 dna topoisomerase iv subunit b : DNA gyrase subunit B OS=uncultured planctomycete GN=HGMM_F22C11C07 PE=3 SV=1: HATPase_c: DNA_gyraseB: Toprim: DNA_gyraseB_C\tK02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]" }, { "name":"SOIL9_70110 dna gyrase subunit b : DNA gyrase subunit B OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=gyrB PE=3 SV=1: HATPase_c: DNA_gyraseB: Toprim: DNA_gyraseB_C\tK02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]" }, { "name":"SOIL9_40010 dna topoisomerase i : DNA topoisomerase 1 OS=uncultured planctomycete GN=topA PE=3 SV=1: Toprim: Topoisom_bac: zf-C4_Topoisom: zf-C4_Topoisom: zf-C4_Topoisom: zf-C4_Topoisom\tK03168 topA; DNA topoisomerase I [EC:5.6.2.1]" }, { "name":"SOIL9_77910 dna topoisomerase : DNA topoisomerase OS=Caulobacter segnis (strain ATCC 21756 \/ DSM 7131 \/ JCM 7823 \/ NBRC 15250 \/ LMG 17158 \/ TK0059) GN=Cseg_3110 PE=4 SV=1: Topoisom_I\tK03168 topA; DNA topoisomerase I [EC:5.6.2.1]" }, { "name":"SOIL9_02970 histone family protein dna-binding protein : Histone family protein DNA-binding protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1271 PE=3 SV=1: Bac_DNA_binding\tK05788 ihfB; integration host factor subunit beta" }, { "name":"SOIL9_51150 atp-dependent dna helicase : ATP-dependent DNA helicase RecQ OS=Rhodopirellula baltica SH28 GN=RBSH_06099 PE=4 SV=1: DEAD: Helicase_C: RQC: HRDC: HTH_40\tK03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]" }, { "name":"SOIL9_81000 atp-dependent dna helicase : ATP-dependent DNA helicase, RecQ family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1452 PE=4 SV=1: DEAD: Helicase_C\tK03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]" }, { "name":"SOIL9_61880 dna-directed dna polymerase : DNA-directed DNA polymerase OS=Meiothermus ruber (strain ATCC 35948 \/ DSM 1279 \/ VKM B-1258 \/ 21) GN=Mrub_3025 PE=4 SV=1: IMS: IMS_HHH: IMS_C\tK02346 dinB; DNA polymerase IV [EC:2.7.7.7]" }, { "name":"SOIL9_01740 sos-response transcriptional : LexA repressor OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=lexA PE=3 SV=1: LexA_DNA_bind: Peptidase_S24\tK01356 lexA; repressor LexA [EC:3.4.21.88]" }, { "name":"SOIL9_16500 family transcriptional regulator : LexA repressor OS=Pseudomonas entomophila (strain L48) GN=lexA PE=3 SV=1: Peptidase_S24\tK01356 lexA; repressor LexA [EC:3.4.21.88]" }, { "name":"SOIL9_44250 family transcriptional regulator : LexA repressor OS=Thioalkalivibrio thiocyanoxidans ARh 4 GN=lexA PE=3 SV=1: LexA_DNA_bind: Peptidase_S24\tK01356 lexA; repressor LexA [EC:3.4.21.88]" }, { "name":"SOIL9_69610 histidinol phosphatase : DNA polymerase IV (Family X) OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2234 PE=4 SV=1: HHH_8: DNA_pol_B_thumb: PHP\tK02347 polX; DNA polymerase (family X)" }, { "name":"SOIL9_39420 helicase c2 : DNA helicase, Rad3 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5251 PE=4 SV=1: DEAD: DEAD_2: Helicase_C_2\tK03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]" }, { "name":"SOIL9_80970 dead deah box helicase : DEAD\/H associated domain protein OS=Roseiflexus castenholzii (strain DSM 13941 \/ HLO8) GN=Rcas_1024 PE=4 SV=1: DEAD: Helicase_C: DEAD_assoc\tK03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]" }, { "name":"SOIL9_40630 ribonucleoside-diphosphate adenosylcobalamin-dependent : Ribonucleoside-diphosphate reductase subunit alpha OS=Melioribacter roseus (strain JCM 17771 \/ P3M-2) GN=MROS_2107 PE=4 SV=1: Ribonuc_red_2_N: Ribonuc_red_lgC: Ribonuc_red_lgC: TSCPD\tK00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]" }, { "name":"SOIL9_40860 ribonucleoside-diphosphate reductase : Ribonucleoside-diphosphate reductase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0900 PE=3 SV=1: ATP-cone: Ribonuc_red_lgN: Ribonuc_red_lgC\tK00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]" }, { "name":"SOIL9_40850 ribonucleoside-diphosphate reductase : Ribonucleoside-diphosphate reductase subunit beta OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0901 PE=3 SV=1: Ribonuc_red_sm\tK00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]" }, { "name":"SOIL9_66330 phosphoesterase domain protein : Exopolyphosphatase-like enzyme OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6677 PE=4 SV=1: DHH: DHHA1\tK06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]" } ] }, { "name":"03029 Mitochondrial biogenesis [BR:gms03029]", "children":[ { "name":"SOIL9_70890 translation initiation factor if-2 : Translation initiation factor IF-2 OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=infB PE=3 SV=1: IF2_N: GTP_EFTU: GTP_EFTU_D2: IF-2\tK02519 infB; translation initiation factor IF-2" }, { "name":"SOIL9_69190 translation initiation factor if-3 : Translation initiation factor IF-3 OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=infC PE=3 SV=1: IF3_N: IF3_C\tK02520 infC; translation initiation factor IF-3" }, { "name":"SOIL9_12250 elongation factor ts : Elongation factor Ts OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=tsf PE=3 SV=1: UBA: EF_TS\tK02357 tsf; elongation factor Ts" }, { "name":"SOIL9_03630 elongation factor tu : Elongation factor Tu OS=Planctomyces maris DSM 8797 GN=tuf PE=3 SV=1: GTP_EFTU: GTP_EFTU_D2: GTP_EFTU_D3\tK02358 tuf; elongation factor Tu" }, { "name":"SOIL9_11170 elongation factor tu : Elongation factor Tu OS=Rhodopirellula maiorica SM1 GN=tuf PE=3 SV=1: GTP_EFTU: GTP_EFTU_D2: GTP_EFTU_D3\tK02358 tuf; elongation factor Tu" }, { "name":"SOIL9_11280 translation elongation factor g : Elongation factor G OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=fusA PE=3 SV=1: GTP_EFTU: GTP_EFTU_D2: EFG_II: EFG_IV: EFG_C\tK02355 fusA; elongation factor G" }, { "name":"SOIL9_29360 elongation factor g : Translation elongation factor-like GTPase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2640 PE=4 SV=1: GTP_EFTU: GTP_EFTU_D2: EFG_II: EFG_IV: EFG_IV: EFG_C\tK02355 fusA; elongation factor G" }, { "name":"SOIL9_66010 translation elongation factor g : Elongation factor G OS=Thermosediminibacter oceani (strain ATCC BAA-1034 \/ DSM 16646 \/ JW\/IW-1228P) GN=fusA PE=3 SV=1: GTP_EFTU: GTP_EFTU_D2: EFG_II: EFG_IV: EFG_C\tK02355 fusA; elongation factor G" }, { "name":"SOIL9_40100 tyrosyl-trna synthetase : Tyrosine--tRNA ligase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_2772 PE=4 SV=1: tRNA-synt_1b\tK01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]" }, { "name":"SOIL9_23170 leucyl-trna synthetase : Leucine--tRNA ligase OS=uncultured planctomycete GN=leuS PE=3 SV=1: tRNA-synt_1: tRNA-synt_1_2: tRNA-synt_1: Anticodon_1\tK01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]" }, { "name":"SOIL9_17020 aspartyl-trna synthetase : Aspartate--tRNA(Asp\/Asn) ligase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=aspS PE=3 SV=1: tRNA_anti-codon: tRNA-synt_2: GAD\tK01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]" }, { "name":"SOIL9_46420 glycyl-trna synthetase : Glycine--tRNA ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=glyQS PE=3 SV=1: tRNA-synt_2b: HGTP_anticodon\tK01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]" }, { "name":"SOIL9_06530 arginyl-trna synthetase : Arginine--tRNA ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=argS PE=3 SV=1: Arg_tRNA_synt_N: tRNA-synt_1d: DALR_1\tK01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]" }, { "name":"SOIL9_66140 glutamyl-trna amidotransferase : Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=gatA PE=3 SV=1: Amidase\tK02433 gatA; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]" }, { "name":"SOIL9_70290 aspartyl glutamyl-trna amidotransferase subunit b : Aspartyl\/glutamyl-tRNA(Asn\/Gln) amidotransferase subunit B OS=Blastopirellula marina DSM 3645 GN=gatB PE=3 SV=1: GatB_N: GatB_Yqey\tK02434 gatB; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]" }, { "name":"SOIL9_66130 glutamyl-trna amidotransferase subunit c : Aspartyl\/glutamyl-tRNA(Asn\/Gln) amidotransferase subunit C OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=gatC PE=3 SV=1: Glu-tRNAGln\tK02435 gatC; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]" }, { "name":"SOIL9_46540 dna rna non-specific endonuclease : DNA\/RNA non-specific endonuclease OS=Herpetosiphon aurantiacus (strain ATCC 23779 \/ DSM 785) GN=Haur_3644 PE=4 SV=1: Endonuclease_NS\tK01173 ENDOG; endonuclease G, mitochondrial" }, { "name":"SOIL9_46560 dna rna non-specific endonuclease : DNA\/RNA endonuclease G, NUC1 OS=Chamaesiphon minutus PCC 6605 GN=Cha6605_2864 PE=4 SV=1: Endonuclease_NS\tK01173 ENDOG; endonuclease G, mitochondrial" }, { "name":"SOIL9_85050 protease : Protease OS=Rhodopirellula baltica SWK14 GN=RBSWK_05908 PE=4 SV=1: Trypsin_2: Endonuclease_NS\tK01173 ENDOG; endonuclease G, mitochondrial" }, { "name":"SOIL9_64920 single-stranded dna-binding protein : Single-stranded DNA-binding protein OS=Phycisphaera mikurensis (strain NBRC 102666 \/ KCTC 22515 \/ FYK2301M01) GN=ssb PE=4 SV=1: SSB\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SOIL9_66880 outer membrane protein assembly protein : Surface antigen (D15) OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2663 PE=4 SV=1: Surf_Ag_VNR: Surf_Ag_VNR: Surf_Ag_VNR: Surf_Ag_VNR: Surf_Ag_VNR: Bac_surface_Ag\tK07277 SAM50; outer membrane protein insertion porin family" }, { "name":"SOIL9_25310 molecular chaperone : Chaperone protein HscA OS=Terriglobus roseus (strain DSM 18391 \/ NRRL B-41598 \/ KBS 63) GN=Terro_4169 PE=3 SV=1: HSP70: Fe-S_assembly\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SOIL9_54850 Heat shock protein 70 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3585 PE=3 SV=1: HSP70: HSP70\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SOIL9_59680 chaperone protein : Chaperone protein DnaK OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=dnaK PE=2 SV=1: HSP70\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SOIL9_50190 co-chaperone : Protein GrpE OS=Planococcus donghaensis MPA1U2 GN=grpE PE=3 SV=1: GrpE\tK03687 GRPE; molecular chaperone GrpE" }, { "name":"SOIL9_50210 chaperonin : 60 kDa chaperonin OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=groL PE=3 SV=1: Cpn60_TCP1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SOIL9_50230 chaperonin : 60 kDa chaperonin OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=groL PE=3 SV=1: Cpn60_TCP1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SOIL9_50690 chaperonin : 60 kDa chaperonin OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=groL PE=3 SV=1: Cpn60_TCP1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SOIL9_50220 10 kda chaperonin : 10 kDa chaperonin OS=Rhodopirellula baltica SWK14 GN=groS PE=3 SV=1: Cpn10\tK04078 groES; chaperonin GroES" }, { "name":"SOIL9_50680 chaperonin cpn10 : 10 kDa chaperonin OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=groS PE=3 SV=1: Cpn10\tK04078 groES; chaperonin GroES" }, { "name":"SOIL9_69520 chaperonin cpn10 : 10 kDa chaperonin OS=planctomycete KSU-1 GN=groS PE=3 SV=1: Cpn10\tK04078 groES; chaperonin GroES" }, { "name":"SOIL9_50200 chaperone protein : Chaperone protein DnaJ OS=Xenorhabdus doucetiae GN=dnaJ PE=3 SV=1: DnaJ: DnaJ_CXXCXGXG: CTDII\tK03686 dnaJ; molecular chaperone DnaJ" }, { "name":"SOIL9_00460 cysteine desulfurase : Cysteine desulfurase family protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0245 PE=4 SV=1: Aminotran_5: Aminotran_5\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]" }, { "name":"SOIL9_25240 cysteine desulfurase : Cysteine desulfurase IscS OS=Acidobacterium capsulatum (strain ATCC 51196 \/ DSM 11244 \/ JCM 7670) GN=icsS2 PE=3 SV=1: Aminotran_5\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]" }, { "name":"SOIL9_25280 fe-s protein assembly co-chaperone : Heat shock protein DnaJ-like protein OS=Koribacter versatilis (strain Ellin345) GN=Acid345_0481 PE=4 SV=1: DnaJ: HSCB_C\tK04082 hscB; molecular chaperone HscB" }, { "name":"SOIL9_69770 acyl-dehydrogenase : Acyl-CoA dehydrogenase domain-containing protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_3707 PE=3 SV=1: Acyl-CoA_dh_N: Acyl-CoA_dh_M: Acyl-CoA_dh_1\tK15980 ACAD9; acyl-CoA dehydrogenase family member 9 [EC:1.3.99.-]" }, { "name":"SOIL9_28740 atp-binding protein : Cobyrinic acid ac-diamide synthase OS=Rhodothermus marinus (strain ATCC 43812 \/ DSM 4252 \/ R-10) GN=Rmar_2325 PE=4 SV=1: AAA_31: ParA\tK03593 mrp; ATP-binding protein involved in chromosome partitioning" }, { "name":"SOIL9_53560 protoheme ix farnesyltransferase : Protoheme IX farnesyltransferase OS=Solibacter usitatus (strain Ellin6076) GN=ctaB PE=3 SV=1: UbiA\tK02257 COX10; heme o synthase [EC:2.5.1.141]" }, { "name":"SOIL9_53570 Cytochrome oxidase assembly OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_2264 PE=4 SV=1: COX15-CtaA: COX15-CtaA\tK02259 COX15; heme a synthase [EC:1.17.99.9]" }, { "name":"SOIL9_46890 60 kda inner membrane insertion protein : Membrane protein insertase YidC OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=yidC PE=3 SV=1: YidC_periplas: 60KD_IMP\tK03217 yidC; YidC\/Oxa1 family membrane protein insertase" }, { "name":"SOIL9_53550 Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_04800 PE=4 SV=1: SCO1-SenC\tK07152 SCO1; protein SCO1" }, { "name":"SOIL9_53630 Uncharacterized protein SCO1\/SenC\/PrrC, involved in biogenesis of respiratory and photosynthetic systems OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3660 PE=4 SV=1\tK07152 SCO1; protein SCO1" }, { "name":"SOIL9_59030 heat shock protein 90 : Chaperone protein HtpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1: HATPase_c_3: HSP90\tK04079 HSP90A; molecular chaperone HtpG" } ] } ] }, { "name":"09183 Protein families: signaling and cellular processes", "children":[ { "name":"02000 Transporters [BR:gms02000]", "children":[ { "name":"SOIL9_09550 lipid a export atp-binding permease protein : ABC-type multidrug transport system, ATPase and permease component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2921 PE=3 SV=1: ABC_membrane: ABC_tran\tK11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]" }, { "name":"SOIL9_16190 family transcriptional regulator : ABC-type multidrug transport system, ATPase and permease component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6108 PE=4 SV=1: ABC_membrane: ABC_tran\tK06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial" }, { "name":"SOIL9_77900 abc transporter : ABC-type multidrug transport system, ATPase and permease component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1251 PE=3 SV=1: ABC_membrane: ABC_tran\tK06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial" }, { "name":"SOIL9_23970 abc transporter atp-binding protein : ABC-type transport system, ATPase component OS=Candidatus Nitrospira defluvii GN=NIDE4018 PE=3 SV=1: ABC_tran: ABC_tran\tK15738 uup; ABC transport system ATP-binding\/permease protein" }, { "name":"SOIL9_18390 abc transporter permease : Sulfate transporter subunit OS=Massilia consociata GN=JN27_15615 PE=4 SV=1: SBP_bac_11\tK23163 sbp; sulfate\/thiosulfate transport system substrate-binding protein" }, { "name":"SOIL9_21560 sulfate thiosulfate transporter subunit : Sulfate\/thiosulfate transporter subunit OS=Mesorhizobium sp. L48C026A00 GN=X737_29710 PE=4 SV=1: BPD_transp_1\tK02046 cysU; sulfate\/thiosulfate transport system permease protein" }, { "name":"SOIL9_21570 sulfate abc permease : Sulfate ABC transporter, permease CysW OS=Acinetobacter nectaris CIP 110549 GN=P256_00304 PE=4 SV=1: BPD_transp_1\tK02047 cysW; sulfate\/thiosulfate transport system permease protein" }, { "name":"SOIL9_21580 sulfate abc transporter : Sulfate\/thiosulfate import ATP-binding protein CysA OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=cysA PE=3 SV=1: ABC_tran: TOBE_3\tK02045 cysA; sulfate\/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]" }, { "name":"SOIL9_04110 molybdenum abc periplasmic molybdate-binding protein : Molybdenum ABC transporter, periplasmic molybdate-binding protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_03582 PE=4 SV=1: SBP_bac_11\tK02020 modA; molybdate transport system substrate-binding protein" }, { "name":"SOIL9_04100 -like abc-type porter : ABC-type molybdate transport system, permease component OS=Planctomyces maris DSM 8797 GN=PM8797T_31633 PE=3 SV=1: BPD_transp_1\tK02018 modB; molybdate transport system permease protein" }, { "name":"SOIL9_68630 sulfate abc transporter atpase : ABC-type sulfate transport system, ATPase component OS=Planctomyces maris DSM 8797 GN=PM8797T_31628 PE=4 SV=1: ABC_tran\tK02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]" }, { "name":"SOIL9_42640 abc transporter : Uncharacterized protein OS=Mucor circinelloides f. circinelloides (strain 1006PhL) GN=HMPREF1544_02450 PE=4 SV=1: ABC_tran: ABC_tran\tK05776 modF; molybdate transport system ATP-binding protein" }, { "name":"SOIL9_20810 NMT1\/THI5 like domain protein OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD2548 PE=4 SV=1: NMT1_2\tK15553 ssuA; sulfonate transport system substrate-binding protein" }, { "name":"SOIL9_20820 abc transporter permease : Binding-protein-dependent transport systems inner membrane component OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD2549 PE=3 SV=1: BPD_transp_1\tK15554 ssuC; sulfonate transport system permease protein" }, { "name":"SOIL9_20830 abc transporter atp-binding protein : ABC transporter related-protein OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD2550 PE=3 SV=1: ABC_tran\tK15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]" }, { "name":"SOIL9_67240 abc transporter substrate-binding protein : Spermidine\/putrescine ABC transporter substrate binding protein OS=Rhizobium lupini HPC(L) GN=C241_09881 PE=4 SV=1: SBP_bac_8\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"SOIL9_67260 polyamine abc transporter permease : ABC transporter permease OS=Pseudomonas poae RE*1-1-14 GN=H045_18210 PE=3 SV=1: BPD_transp_1\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"SOIL9_67250 polyamine abc transporter permease : Polyamine ABC transporter permease OS=Skermanella stibiiresistens SB22 GN=N825_14000 PE=3 SV=1: BPD_transp_1\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"SOIL9_66280 spermidine putrescine abc transporter atpase : Putative component of ABC transporter OS=Rhizobium freirei PRF 81 GN=RHSP_71811 PE=3 SV=1: ABC_tran: TOBE_2\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"SOIL9_20640 amino acid abc transporter permease : Glycine betaine\/L-proline ABC transporter permease and substrate-binding protein OS=Myxococcus fulvus (strain ATCC BAA-855 \/ HW-1) GN=LILAB_05845 PE=3 SV=1: OpuAC: BPD_transp_1\tK05845 opuC; osmoprotectant transport system substrate-binding protein" }, { "name":"SOIL9_20650 abc transporter atp-binding protein : ABC transporter ATP-binding protein OS=Cystobacter violaceus Cb vi76 GN=Q664_24865 PE=4 SV=1: ABC_tran\tK05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]" }, { "name":"SOIL9_18680 Periplasmic binding protein domain protein OS=Gemmatimonadetes bacterium KBS708 GN=J421_5609 PE=4 SV=1: Peripla_BP_4\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"SOIL9_47440 Monosaccharide ABC transporter substrate-binding protein, CUT2 family OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_3304 PE=4 SV=1: Peripla_BP_4\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"SOIL9_18710 ribose abc transporter permease : Monosaccharide-transporting ATPase OS=Opitutus terrae (strain DSM 11246 \/ PB90-1) GN=Oter_3322 PE=4 SV=1: BPD_transp_2\tK10440 rbsC; ribose transport system permease protein" }, { "name":"SOIL9_47420 sugar abc transporter permease : Inner-membrane translocator OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0780 PE=4 SV=1: BPD_transp_2\tK10440 rbsC; ribose transport system permease protein" }, { "name":"SOIL9_18700 sugar abc transporter : ABC-type sugar transport system, ATPase component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2682 PE=3 SV=1: ABC_tran: ABC_tran\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"SOIL9_47430 d-ribose transporter atp binding protein : Ribose import ATP-binding protein RbsA OS=Blastopirellula marina DSM 3645 GN=rbsA PE=3 SV=1: ABC_tran: ABC_tran\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"SOIL9_39900 Hypothetical conserved protein OS=uncultured planctomycete GN=HGMM_F09D09C20 PE=4 SV=1: MCE\tK02067 mlaD; phospholipid\/cholesterol\/gamma-HCH transport system substrate-binding protein" }, { "name":"SOIL9_72670 ABC-type transport system involved in resistance to organic solvents, periplasmic component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1321 PE=4 SV=1: MCE: OmpA\tK02067 mlaD; phospholipid\/cholesterol\/gamma-HCH transport system substrate-binding protein" }, { "name":"SOIL9_27240 abc transporter permease : ABC-type transport system involved in resistance to organic solvents, permease component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1322 PE=4 SV=1: Permease\tK02066 mlaE; phospholipid\/cholesterol\/gamma-HCH transport system permease protein" }, { "name":"SOIL9_51280 abc transporter permease : Conserved hypothetical integral membrane protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1531 PE=4 SV=1: Permease\tK02066 mlaE; phospholipid\/cholesterol\/gamma-HCH transport system permease protein" }, { "name":"SOIL9_08400 abc atp-binding protein : ABC transporter related protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1751 PE=3 SV=1: ABC_tran\tK02065 mlaF; phospholipid\/cholesterol\/gamma-HCH transport system ATP-binding protein" }, { "name":"SOIL9_79500 abc transporter substrate-binding protein : Extracellular solute-binding protein family 1 OS=Arcobacter nitrofigilis (strain ATCC 33309 \/ DSM 7299 \/ LMG 7604 \/ NCTC 12251 \/ CI) GN=Arnit_1187 PE=4 SV=1: SBP_bac_1\tK02027 ABC.MS.S; multiple sugar transport system substrate-binding protein" }, { "name":"SOIL9_32740 phosphate abc transporter substrate-binding protein : Phosphate-binding protein OS=Desulfosporosinus meridiei (strain ATCC BAA-275 \/ DSM 13257 \/ NCIMB 13706 \/ S10) GN=Desmer_2752 PE=3 SV=1: PBP_like_2\tK02040 pstS; phosphate transport system substrate-binding protein" }, { "name":"SOIL9_32750 phosphate abc transporter permease : Phosphate ABC transporter, permease protein PstC \/ phosphate ABC transporter, permease protein PstA multi-domain protein OS=Bordetella holmesii CDC-H635-BH GN=L499_A0942 PE=3 SV=1: BPD_transp_1: BPD_transp_1\tK02037 pstC; phosphate transport system permease protein" }, { "name":"SOIL9_73270 phosphate abc transporter atp-binding protein : Phosphate import ATP-binding protein PstB OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=pstB PE=3 SV=1: ABC_tran\tK02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]" }, { "name":"SOIL9_34300 extracellular ligand-binding receptor : Uncharacterized protein OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 \/ DSM 11347 \/ YP87) GN=THEYE_A0613 PE=4 SV=1: Peripla_BP_6\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SOIL9_56310 Extracellular ligand-binding receptor OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4547 PE=4 SV=1: Peripla_BP_6\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SOIL9_56320 Extracellular ligand-binding receptor OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4547 PE=4 SV=1: Peripla_BP_6\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SOIL9_56330 abc transporter permease : Inner-membrane translocator OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4548 PE=4 SV=1: BPD_transp_2\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"SOIL9_56340 inner-membrane translocator : Inner-membrane translocator OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4549 PE=4 SV=1: BPD_transp_2\tK01998 livM; branched-chain amino acid transport system permease protein" }, { "name":"SOIL9_56350 branched-chain amino acid abc transporter atp-binding protein : ABC transporter related protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4550 PE=4 SV=1: ABC_tran: ABC_tran: BCA_ABC_TP_C\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"SOIL9_56360 amino acid abc transporter atpase : ABC transporter related protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4551 PE=3 SV=1: ABC_tran\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"SOIL9_58210 amino acid abc transporter permease : Amine acid ABC transporter, permease protein, 3-TM region, His\/Glu\/Gln\/Arg\/opine family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5234 PE=4 SV=1: SBP_bac_3: BPD_transp_1\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"SOIL9_58220 glutamine abc transporter atp-binding protein : ABC-type polar amino acid transport system, ATPase component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5233 PE=3 SV=1: ABC_tran\tK02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"SOIL9_34190 Extracellular solute-binding protein family 5 OS=Thermoanaerobacter italicus (strain DSM 9252 \/ Ab9) GN=Thit_0815 PE=4 SV=1: SBP_bac_5\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"SOIL9_02910 abc transporter substrate-binding protein : ABC transporter substrate-binding protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2405 PE=4 SV=1: Peripla_BP_2\tK02016 ABC.FEV.S; iron complex transport system substrate-binding protein" }, { "name":"SOIL9_40060 metal abc transporter substrate-binding protein : Periplasmic solute binding protein OS=Cyanothece sp. (strain PCC 7425 \/ ATCC 29141) GN=Cyan7425_1915 PE=3 SV=1: TroA\tK09815 znuA; zinc transport system substrate-binding protein" }, { "name":"SOIL9_27550 zinc abc transporter permease : Zinc transport system permease OS=Bilophila wadsworthia 3_1_6 GN=HMPREF0179_01000 PE=3 SV=1: ABC-3\tK09816 znuB; zinc transport system permease protein" }, { "name":"SOIL9_40070 abc transporter atp-binding protein : Zinc transport system ATP-binding protein OS=uncultured planctomycete GN=HGMM_F33C03C09 PE=3 SV=1: ABC_tran\tK09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]" }, { "name":"SOIL9_05680 cobalt abc transporter permease : Putative cobalt transport protein, cbiQ family OS=uncultured archaeon GN=cbiQ PE=4 SV=1: CbiQ\tK02008 cbiQ; cobalt\/nickel transport system permease protein" }, { "name":"SOIL9_17040 cobalamin (vitamin b12) biosynthesis protein : Cobalamin (Vitamin B12) biosynthesis CbiM protein OS=Methanosaeta harundinacea (strain 6Ac) GN=Mhar_2290 PE=4 SV=1: CbiM\tK02007 cbiM; cobalt\/nickel transport system permease protein" }, { "name":"SOIL9_05690 cobalt abc transporter atp-binding protein : ABC-type cobalt transport system, ATPase component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0844 PE=3 SV=1: ABC_tran\tK02006 cbiO; cobalt\/nickel transport system ATP-binding protein" }, { "name":"SOIL9_69410 Uncharacterized protein OS=Thermovibrio ammonificans (strain DSM 15698 \/ JCM 12110 \/ HB-1) GN=Theam_1524 PE=4 SV=1: CarboxypepD_reg\tK16915 cbiL; nickel transport protein" }, { "name":"SOIL9_68580 unnamed protein product; BLAST_uniprot: no_hits\tK16785 ecfT; energy-coupling factor transport system permease protein" }, { "name":"SOIL9_26590 abc-2 type transporter family protein : Transport permease protein OS=Delftia acidovorans CCUG 274B GN=HMPREF9701_00582 PE=3 SV=1: ABC2_membrane\tK09690 wzm; homopolymeric O-antigen transport system permease protein" }, { "name":"SOIL9_39260 abc transporter permease : ABC-2 type transporter family protein OS=Vibrio cholerae GN=DN34_2545 PE=4 SV=1: ABC2_membrane\tK09690 wzm; homopolymeric O-antigen transport system permease protein" }, { "name":"SOIL9_83920 phosphate abc transporter permease : Transport permease protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2461 PE=3 SV=1: ABC2_membrane\tK09690 wzm; homopolymeric O-antigen transport system permease protein" }, { "name":"SOIL9_26580 sugar abc transporter : Sugar ABC transporter OS=Clostridium butyricum GN=OA81_18585 PE=4 SV=1: ABC_tran\tK09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]" }, { "name":"SOIL9_83930 abc transporter : ABC transporter, ATP-binding protein OS=Geobacter sulfurreducens (strain ATCC 51573 \/ DSM 12127 \/ PCA) GN=xapH PE=4 SV=1: ABC_tran: Wzt_C\tK09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]" }, { "name":"SOIL9_82130 permease family protein : Putative permease OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2241 PE=4 SV=1: YjgP_YjgQ\tK07091 lptF; lipopolysaccharide export system permease protein" }, { "name":"SOIL9_17080 permease family protein : Putative permease OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2240 PE=4 SV=1: YjgP_YjgQ\tK11720 lptG; lipopolysaccharide export system permease protein" }, { "name":"SOIL9_67990 abc transporter : ABC-type (Unclassified) transport system, ATPase component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1883 PE=3 SV=1: ABC_tran\tK06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]" }, { "name":"SOIL9_67790 ABC-type Na+ efflux pump, permease component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6077 PE=4 SV=1: ABC2_membrane_2\tK09696 natB; sodium transport system permease protein" }, { "name":"SOIL9_68370 abc transporter atp-binding protein : Sulfate-transporting ATPase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_1301 PE=4 SV=1: ABC_tran\tK09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]" }, { "name":"SOIL9_56440 Uncharacterized protein OS=Thermoanaerobaculum aquaticum GN=EG19_07635 PE=4 SV=1: ABC2_membrane_4\tK25151 gldF; gliding motility-associated transport system permease protein" }, { "name":"SOIL9_85240 ABC-type transport system involved in multi-copper enzyme maturation, permease component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5948 PE=4 SV=1: ABC2_membrane_2\tK25151 gldF; gliding motility-associated transport system permease protein" }, { "name":"SOIL9_56430 abc transporter : Similar to ABC-type transport system (ATPase component) OS=Candidatus Kuenenia stuttgartiensis GN=kuste3556 PE=4 SV=1: ABC_tran\tK25152 gldA; gliding motility-associated transport system ATP-binding protein" }, { "name":"SOIL9_85250 abc transporter : ABC-type multidrug transport system, ATPase component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5947 PE=4 SV=1: ABC_tran\tK25152 gldA; gliding motility-associated transport system ATP-binding protein" }, { "name":"SOIL9_85230 ABC-type uncharacterized transporter OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5949 PE=4 SV=1: ABC_transp_aux\tK25153 gldG; gliding motility-associatede transport system auxiliary component" }, { "name":"SOIL9_72020 abc-2 type transporter : ABC transporter, ATP-binding subunit, PltJ-like OS=Sulfurospirillum multivorans DSM 12446 GN=SMUL_1322 PE=4 SV=1: ABC2_membrane_3\tK25181 ybhS; drug efflux transport system permease protein" }, { "name":"SOIL9_72030 multidrug abc transporter atp-binding protein : ABC transporter related-protein OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD3510 PE=3 SV=1: ABC_tran\tK25182 ybhF; drug efflux transport system ATP-binding protein" }, { "name":"SOIL9_72040 secretion protein family protein : HlyD family secretion protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_08347 PE=4 SV=1: Biotin_lipoyl_2: HlyD_3\tK25183 ybhG; membrane fusion protein YbhG" }, { "name":"SOIL9_34700 abc-2 type transporter : ABC-2 type transporter OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_4114 PE=4 SV=1: ABC2_membrane_3\tK25143 lnrM; linearmycin\/streptolysin S transport system permease protein" }, { "name":"SOIL9_83770 ABC-2 type transporter OS=Fimbriimonas ginsengisoli Gsoil 348 GN=OP10G_4703 PE=4 SV=1: ABC2_membrane_3\tK25143 lnrM; linearmycin\/streptolysin S transport system permease protein" }, { "name":"SOIL9_34690 antibiotic abc transporter atp-binding protein : ABC transporter-like protein OS=Bacillus sp. 1NLA3E GN=B1NLA3E_04635 PE=3 SV=1: ABC_tran\tK25144 lnrL; linearmycin\/streptolysin S transport system ATP-binding protein" }, { "name":"SOIL9_83760 antibiotic abc transporter atp-binding protein : Antibiotic ABC transporter ATP-binding protein OS=Paenibacillus durus GN=PDUR_25065 PE=4 SV=1: ABC_tran\tK25144 lnrL; linearmycin\/streptolysin S transport system ATP-binding protein" }, { "name":"SOIL9_58740 Uncharacterized protein OS=Rhodopirellula baltica SWK14 GN=RBSWK_02752 PE=4 SV=1: ABC2_membrane_2\tK25147 berB; beta-exotoxin I transport system permease protein" }, { "name":"SOIL9_58750 abc transporter atp-binding protein : ABC transporter related protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4539 PE=4 SV=1: ABC_tran\tK25148 berA; beta-exotoxin I transport system ATP-binding protein" }, { "name":"SOIL9_54440 membrane protein : ABC-type transport system, involved in lipoprotein release, permease component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5022 PE=4 SV=1: FtsX\tK09808 lolC_E_F; lipoprotein-releasing system permease protein" }, { "name":"SOIL9_10450 lipoprotein releasing system atp-binding protein lold : Lipoprotein-releasing system ATP-binding protein LolD OS=Planctomyces maris DSM 8797 GN=lolD PE=3 SV=1: ABC_tran\tK09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]" }, { "name":"SOIL9_54450 lipoprotein releasing system atp-binding protein : Lipoprotein-releasing system ATP-binding protein LolD OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=lolD PE=3 SV=1: ABC_tran\tK09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]" }, { "name":"SOIL9_82490 protein : DevC protein OS=Leptolyngbya sp. PCC 7375 GN=Lepto7375DRAFT_3296 PE=4 SV=1: MacB_PCD: FtsX\tK25169 devC; DevC family ABC transport system permease protein" }, { "name":"SOIL9_82500 abc transporter : DevC protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4919 PE=4 SV=1: MacB_PCD: FtsX\tK25169 devC; DevC family ABC transport system permease protein" }, { "name":"SOIL9_82510 abc exporter atp-binding family : ABC transporter ATP-binding subunit, DevA type OS=Rhodopirellula baltica WH47 GN=RBWH47_05716 PE=4 SV=1: ABC_tran: cNMP_binding\tK25170 devA; DevA family ABC transport system ATP-binding protein" }, { "name":"SOIL9_82410 ABC exporter membrane fusion protein, DevB family OS=Synechococcus sp. (strain ATCC 27167 \/ PCC 6312) GN=Syn6312_3624 PE=4 SV=1: HlyD_3\tK25171 devB; membrane fusion protein DevB" }, { "name":"SOIL9_14460 multidrug abc transporter permease : Transport permease protein OS=Solibacter usitatus (strain Ellin6076) GN=Acid_0603 PE=3 SV=1: ABC2_membrane\tK01992 ABC-2.P; ABC-2 type transport system permease protein" }, { "name":"SOIL9_37990 Putative integral membrane protein OS=Fimbriimonas ginsengisoli Gsoil 348 GN=OP10G_2312 PE=4 SV=1: ABC2_membrane_2\tK01992 ABC-2.P; ABC-2 type transport system permease protein" }, { "name":"SOIL9_38050 Marine sediment metagenome DNA, contig: S03H2_L02834 OS=marine sediment metagenome GN=S03H2_15522 PE=4 SV=1: ABC2_membrane_4\tK01992 ABC-2.P; ABC-2 type transport system permease protein" }, { "name":"SOIL9_38500 Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3783 PE=4 SV=1\tK01992 ABC-2.P; ABC-2 type transport system permease protein" }, { "name":"SOIL9_49700 Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6081 PE=4 SV=1\tK01992 ABC-2.P; ABC-2 type transport system permease protein" }, { "name":"SOIL9_50830 abc-2 family transporter protein : ABC multidrug efflux pump, inner membrane subunit OS=Koribacter versatilis (strain Ellin345) GN=Acid345_0285 PE=4 SV=1: ABC2_membrane_3\tK01992 ABC-2.P; ABC-2 type transport system permease protein" }, { "name":"SOIL9_56580 abc transporter : Transport permease protein OS=Candidatus Acetothermus autotrophicum GN=HGMM_OP2C039 PE=3 SV=1: ABC2_membrane\tK01992 ABC-2.P; ABC-2 type transport system permease protein" }, { "name":"SOIL9_71800 abc transporter : Transport permease protein OS=Candidatus Acetothermus autotrophicum GN=HGMM_OP2C038 PE=3 SV=1: ABC2_membrane\tK01992 ABC-2.P; ABC-2 type transport system permease protein" }, { "name":"SOIL9_71920 Uncharacterized protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2114 PE=4 SV=1: ABC2_membrane_4\tK01992 ABC-2.P; ABC-2 type transport system permease protein" }, { "name":"SOIL9_71940 Uncharacterized protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2112 PE=4 SV=1: ABC2_membrane_4\tK01992 ABC-2.P; ABC-2 type transport system permease protein" }, { "name":"SOIL9_01640 abc transporter : ABC-type multidrug transport system ATPase component OS=Clostridium sp. CAG:505 GN=BN684_01535 PE=4 SV=1: ABC_tran\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SOIL9_06560 abc transporter atp-binding protein : ABC-type multidrug transport system, ATPase component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3324 PE=3 SV=1: ABC_tran\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SOIL9_14450 multidrug abc transporter atp-binding protein : ABC transporter related OS=Solibacter usitatus (strain Ellin6076) GN=Acid_0602 PE=3 SV=1: ABC_tran\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SOIL9_27140 abc transporter atp-binding protein : Putative ABC transporter ATP-binding protein OS=Phycisphaera mikurensis (strain NBRC 102666 \/ KCTC 22515 \/ FYK2301M01) GN=PSMK_25820 PE=3 SV=1: ABC_tran\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SOIL9_38040 abc transporter : ABC transporter, ATP-binding protein NosF OS=Fimbriimonas ginsengisoli Gsoil 348 GN=OP10G_2311 PE=3 SV=1: ABC_tran\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SOIL9_38070 abc transporter-like protein : ABC transporter related protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2111 PE=4 SV=1: ABC_tran\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SOIL9_38490 multidrug abc transporter atp-binding protein : ABC-type multidrug transport system, ATPase component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3784 PE=3 SV=1: ABC_tran\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SOIL9_38790 abc transporter atp-binding protein : ABC transporter related protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2389 PE=4 SV=1: ABC_tran\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SOIL9_39200 abc transporter atp binding protein : ABC transporter related-protein OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD3190 PE=4 SV=1: ABC_tran\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SOIL9_49720 abc transporter : ABC transporter related protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0192 PE=3 SV=1: ABC_tran\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SOIL9_50840 abc transporter atpase : ABC-type multidrug transport system, ATPase component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1472 PE=3 SV=1: ABC_tran\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SOIL9_71790 abc transporter atp-binding protein : Putative ABC transporter ATP-binding protein OS=Anaerolinea thermophila (strain DSM 14523 \/ JCM 11388 \/ NBRC 100420 \/ UNI-1) GN=ANT_06960 PE=4 SV=1: ABC_tran\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SOIL9_71930 abc transporter : ABC transporter related protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2113 PE=3 SV=1: ABC_tran\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SOIL9_71950 abc transporter : ABC transporter related protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2111 PE=4 SV=1: ABC_tran\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SOIL9_75070 abc transporter : ABC transporter related protein OS=Sphaerobacter thermophilus (strain DSM 20745 \/ S 6022) GN=Sthe_2097 PE=4 SV=1: ABC_tran\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SOIL9_76300 abc transporter : ABC transporter, ATP-binding protein OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_2970 PE=4 SV=1: ABC_tran\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SOIL9_76330 abc transporter : ABC transporter related protein OS=Sphaerobacter thermophilus (strain DSM 20745 \/ S 6022) GN=Sthe_2191 PE=3 SV=1: ABC_tran\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SOIL9_79720 abc transporter atp-binding protein : ABC transporter related protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0119 PE=4 SV=1: ABC_tran\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SOIL9_84510 multidrug abc transporter atp-binding protein : ABC-type multidrug transport system, ATPase component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0578 PE=4 SV=1: ABC_tran\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SOIL9_03510 abc transporter atp-binding protein : ABC transport system ATP-binding protein\/permease OS=uncultured planctomycete GN=HGMM_F09D09C23 PE=4 SV=1: MacB_PCD: FtsX\tK02004 ABC.CD.P; putative ABC transport system permease protein" }, { "name":"SOIL9_10440 membrane protein containing permase : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_12748 PE=4 SV=1: MacB_PCD: FtsX: FtsX\tK02004 ABC.CD.P; putative ABC transport system permease protein" }, { "name":"SOIL9_29990 abc transporter permease : ABC transporter system permease protein OS=uncultured planctomycete GN=HGMM_F12C05C04 PE=4 SV=1: MacB_PCD: FtsX\tK02004 ABC.CD.P; putative ABC transport system permease protein" }, { "name":"SOIL9_45800 abc transporter atp-binding protein : ABC-type antimicrobial peptide transport system, permease component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5745 PE=4 SV=1: MacB_PCD: FtsX\tK02004 ABC.CD.P; putative ABC transport system permease protein" }, { "name":"SOIL9_51440 abc transporter permease : ABC-type antimicrobial peptide transport system, permease component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2084 PE=4 SV=1: MacB_PCD: FtsX\tK02004 ABC.CD.P; putative ABC transport system permease protein" }, { "name":"SOIL9_54090 abc transporter permease protein : Uncharacterized protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2118 PE=4 SV=1: MacB_PCD: FtsX\tK02004 ABC.CD.P; putative ABC transport system permease protein" }, { "name":"SOIL9_69010 abc transporter atp-binding protein : Uncharacterized protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2963 PE=4 SV=1: MacB_PCD: FtsX\tK02004 ABC.CD.P; putative ABC transport system permease protein" }, { "name":"SOIL9_69020 multidrug abc transporter permease : Uncharacterized protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2964 PE=4 SV=1: FtsX\tK02004 ABC.CD.P; putative ABC transport system permease protein" }, { "name":"SOIL9_74660 abc transporter permease : Uncharacterized protein OS=Cystobacter violaceus Cb vi76 GN=Q664_27560 PE=4 SV=1: MacB_PCD: FtsX: MacB_PCD: FtsX\tK02004 ABC.CD.P; putative ABC transport system permease protein" }, { "name":"SOIL9_75990 abc transporter permease : ABC-type antimicrobial peptide transport system, permease component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2084 PE=4 SV=1: FtsX\tK02004 ABC.CD.P; putative ABC transport system permease protein" }, { "name":"SOIL9_03500 macrolide abc transporter atp-binding protein : ABC transporter related protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4732 PE=3 SV=1: ABC_tran\tK02003 ABC.CD.A; putative ABC transport system ATP-binding protein" }, { "name":"SOIL9_30000 abc transporter atp-binding protein : ABC transporter related protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1006 PE=3 SV=1: ABC_tran\tK02003 ABC.CD.A; putative ABC transport system ATP-binding protein" }, { "name":"SOIL9_54080 abc transporter (glutamine transport atp-binding protein) : ABC-type antimicrobial peptide transport system, ATPase component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5572 PE=3 SV=1: ABC_tran\tK02003 ABC.CD.A; putative ABC transport system ATP-binding protein" }, { "name":"SOIL9_69000 abc transporter atp-binding protein : ABC transporter related protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2962 PE=3 SV=1: ABC_tran\tK02003 ABC.CD.A; putative ABC transport system ATP-binding protein" }, { "name":"SOIL9_74670 macrolide abc transporter atp-binding protein : Abc transporter related protein OS=Pontibacter sp. BAB1700 GN=O71_05209 PE=3 SV=1: ABC_tran\tK02003 ABC.CD.A; putative ABC transport system ATP-binding protein" }, { "name":"SOIL9_76000 abc transporter atp-binding protein : ABC-type antimicrobial peptide transport system, ATPase component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2085 PE=3 SV=1: ABC_tran\tK02003 ABC.CD.A; putative ABC transport system ATP-binding protein" }, { "name":"SOIL9_82100 abc transporter atp-binding protein : ABC-type antimicrobial peptide transport system, ATPase component OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2085 PE=3 SV=1: ABC_tran\tK02003 ABC.CD.A; putative ABC transport system ATP-binding protein" }, { "name":"SOIL9_31830 Bile acid:sodium symporter OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD2538 PE=4 SV=1: DUF4137\tK14347 SLC10A7; solute carrier family 10 (sodium\/bile acid cotransporter), member 7" }, { "name":"SOIL9_72940 mate efflux family protein : Putative efflux protein, MATE family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0087 PE=4 SV=1: MatE: MatE\tK26939 norM; MATE family, multidrug efflux pump" }, { "name":"SOIL9_85130 mate efflux family protein : Putative efflux protein, MATE family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3011 PE=4 SV=1: MatE: MatE\tK26939 norM; MATE family, multidrug efflux pump" }, { "name":"SOIL9_04250 multidrug transporter : Multidrug transporter MatE OS=Cupriavidus sp. SK-3 GN=CF70_018180 PE=4 SV=1: MatE: MatE\tK26937 dinF; MATE family, multidrug efflux pump" }, { "name":"SOIL9_82430 transporter : Nitrate\/nitrite transporter OS=Desulfomonile tiedjei (strain ATCC 49306 \/ DSM 6799 \/ DCB-1) GN=Desti_1770 PE=4 SV=1: MFS_1\tK08177 oxlT; MFS transporter, OFA family, oxalate\/formate antiporter" }, { "name":"SOIL9_27870 mfs transporter : Sugar phosphate permease OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6136 PE=4 SV=1: MFS_1\tK03535 gudP; MFS transporter, ACS family, glucarate transporter" }, { "name":"SOIL9_10790 major facilitator superfamily mfs_1 : General substrate transporter:Major facilitator superfamily MFS_1 OS=Planctomyces maris DSM 8797 GN=PM8797T_00709 PE=4 SV=1: MFS_1\tK08191 exuT; MFS transporter, ACS family, aldohexuronate transporter" }, { "name":"SOIL9_39990 membrane protein : Major facilitator superfamily MFS_1 OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_2805 PE=4 SV=1: MFS_1\tK08191 exuT; MFS transporter, ACS family, aldohexuronate transporter" }, { "name":"SOIL9_70720 membrane protein : Major facilitator superfamily MFS_1 OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_2805 PE=4 SV=1: MFS_1\tK08191 exuT; MFS transporter, ACS family, aldohexuronate transporter" }, { "name":"SOIL9_79570 membrane protein : Permeases of the major facilitator superfamily OS=Pelotomaculum thermopropionicum (strain DSM 13744 \/ JCM 10971 \/ SI) GN=ProP PE=4 SV=1: MFS_1\tK13021 ttuB; MFS transporter, ACS family, tartrate transporter" }, { "name":"SOIL9_66800 mfs transporter : Glycerol-3-phosphate transporter OS=Planctomyces maris DSM 8797 GN=PM8797T_08404 PE=4 SV=1: MFS_1\tK02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter" }, { "name":"SOIL9_67690 nitrate nitrite transporter integral membrane protein : Nitrate\/nitrite transporter OS=Thermus oshimai JL-2 GN=Theos_1037 PE=4 SV=1: MFS_1: MFS_1\tK02575 NRT2; MFS transporter, NNP family, nitrate\/nitrite transporter" }, { "name":"SOIL9_69240 mfs transporter : Membrane protein, major facilitator superfamily OS=Geobacter bemidjiensis (strain Bem \/ ATCC BAA-1014 \/ DSM 16622) GN=Gbem_2215 PE=4 SV=1: MFS_1\tK23677 SPNS; MFS transporter, Spinster family, sphingosine-1-phosphate transporter" }, { "name":"SOIL9_30090 multidrug transporter : Drug resistance transporter, Bcr\/CflA subfamily OS=Granulicella mallensis (strain ATCC BAA-1857 \/ DSM 23137 \/ MP5ACTX8) GN=AciX8_2710 PE=4 SV=1: MFS_1\tK07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein" }, { "name":"SOIL9_74230 drug resistance subfamily : Drug resistance transporter, EmrB\/QacA subfamily OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_5950 PE=4 SV=1: MFS_1\tK03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein" }, { "name":"SOIL9_08960 fosmidomycin resistance protein : Major facilitator superfamily (MFS_1) transporter OS=Blastopirellula marina DSM 3645 GN=DSM3645_17235 PE=4 SV=1: MFS_1\tK08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein" }, { "name":"SOIL9_23430 phosphoenolpyruvate-protein phosphotransferase : Phosphoenolpyruvate-protein phosphotransferase OS=uncultured planctomycete GN=HGMM_F07G10C17 PE=3 SV=1: PEP-utilisers_N: PEP-utilizers: PEP-utilizers_C\tK08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]" }, { "name":"SOIL9_23420 phosphotransferase hpr-related protein : Phosphocarrier protein HPr OS=Neisseria weaveri LMG 5135 GN=l11_01330 PE=4 SV=1: PTS-HPr\tK02784 ptsH; phosphocarrier protein HPr" }, { "name":"SOIL9_23410 pts iia-like nitrogen-regulatory protein : PTS system, fructose-specific IIA component OS=uncultured planctomycete GN=HGMM_F07G10C19 PE=4 SV=1: PTS_EIIA_2\tK02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]" }, { "name":"SOIL9_25120 mip family channel protein : MIP family channel protein OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_1912 PE=3 SV=1: MIP\tK06188 aqpZ; aquaporin" }, { "name":"SOIL9_38740 major intrinsic protein : Major intrinsic protein OS=Acidocella sp. MX-AZ02 GN=MXAZACID_12947 PE=3 SV=1: MIP\tK02440 glpF; glycerol uptake facilitator" }, { "name":"SOIL9_19520 ammonium transporter : Ammonium transporter OS=Leptospira alexanderi serovar Manhao 3 str. L 60 GN=amt_2 PE=4 SV=1: Ammonium_transp\tK03320 amt; ammonium transporter, Amt family" }, { "name":"SOIL9_25370 von Willebrand factor type A OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_3570 PE=4 SV=1: VWA_2\tK07114 yfbK; Ca-activated chloride channel homolog" }, { "name":"SOIL9_25380 von Willebrand factor type A OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_3571 PE=4 SV=1: VWA_2\tK07114 yfbK; Ca-activated chloride channel homolog" }, { "name":"SOIL9_27630 Vault protein inter-alpha-trypsin domain protein OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD1158 PE=4 SV=1: VIT: VWA_3\tK07114 yfbK; Ca-activated chloride channel homolog" }, { "name":"SOIL9_52950 vault protein inter-alpha-trypsin domain-containing protein : Uncharacterized protein OS=Methanocella paludicola (strain DSM 17711 \/ JCM 13418 \/ NBRC 101707 \/ SANAE) GN=MCP_1582 PE=4 SV=1: VIT: VWA_3: ABC_tran\tK07114 yfbK; Ca-activated chloride channel homolog" }, { "name":"SOIL9_56530 Uncharacterized protein OS=Bacteroides sp. CAG:189 GN=BN523_01774 PE=4 SV=1: vWF_A: VWA_2: DUF3520\tK07114 yfbK; Ca-activated chloride channel homolog" }, { "name":"SOIL9_64740 von Willebrand factor type A (VWA) domain-containing protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_01923 PE=4 SV=1: VWA_2\tK07114 yfbK; Ca-activated chloride channel homolog" }, { "name":"SOIL9_64750 Tetratricopeptide TPR_4 OS=Cyanothece sp. CCY0110 GN=CY0110_28164 PE=4 SV=1: VWA_2\tK07114 yfbK; Ca-activated chloride channel homolog" }, { "name":"SOIL9_64760 tpr repeat-containing protein : Tetratricopeptide repeat protein OS=Microvirga lotononidis GN=MicloDRAFT_00060980 PE=4 SV=1: TPR_2: TPR_11\tK07114 yfbK; Ca-activated chloride channel homolog" }, { "name":"SOIL9_67060 Uncharacterized protein OS=Candidatus Entotheonella sp. TSY1 GN=ETSY1_00880 PE=4 SV=1: VWA_2\tK07114 yfbK; Ca-activated chloride channel homolog" }, { "name":"SOIL9_67070 Mg-chelatase subunit ChlD OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5518 PE=4 SV=1: BatA: VWA_2\tK07114 yfbK; Ca-activated chloride channel homolog" }, { "name":"SOIL9_14400 formate transporter : Formate\/nitrite transporter family protein OS=Burkholderia cenocepacia GN=DM39_6502 PE=4 SV=1: Form_Nir_trans\tK21993 fdhC; formate transporter" }, { "name":"SOIL9_84210 large conductance mechanosensitive channel protein : Large-conductance mechanosensitive channel OS=uncultured bacterium GN=mscL PE=3 SV=1: MscL\tK03282 mscL; large conductance mechanosensitive channel" }, { "name":"SOIL9_15540 mechanosensitive ion channel : MscS Mechanosensitive ion channel OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3813 PE=4 SV=1: MS_channel\tK22044 ybiO; moderate conductance mechanosensitive channel" }, { "name":"SOIL9_09700 magnesium transporter : CBS domain containing protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1776 PE=4 SV=1: CBS: CBS: MgtE\tK06213 mgtE; magnesium transporter" }, { "name":"SOIL9_56740 magnesium transporter : Mg2+ transport protein OS=Planctomyces maris DSM 8797 GN=PM8797T_04900 PE=4 SV=1: MgtE_N: CBS: CBS: MgtE: MgtE\tK06213 mgtE; magnesium transporter" }, { "name":"SOIL9_57420 magnesium transporter : CBS domain containing protein OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD3954 PE=4 SV=1: CBS: CBS: MgtE\tK06213 mgtE; magnesium transporter" }, { "name":"SOIL9_13360 flagellar motor protein : MotA\/TolQ\/ExbB proton channel OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2583 PE=4 SV=1: MotA_ExbB\tK02556 motA; chemotaxis protein MotA" }, { "name":"SOIL9_13350 flagellar motor protein : Motility protein B, N-terminal domain protein OS=Gemmatimonadetes bacterium KBS708 GN=J421_0225 PE=4 SV=1: MotB_plug\tK02557 motB; chemotaxis protein MotB" }, { "name":"SOIL9_29370 proton channel : Gll1141 protein OS=Gloeobacter violaceus (strain PCC 7421) GN=gll1141 PE=3 SV=1: MotA_ExbB\tK03561 exbB; biopolymer transport protein ExbB" }, { "name":"SOIL9_70190 proton channel : Biopolymer transport protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5149 PE=3 SV=1: MotA_ExbB\tK03561 exbB; biopolymer transport protein ExbB" }, { "name":"SOIL9_29390 biopolymer transporter : : ExbD\tK03559 exbD; biopolymer transport protein ExbD" }, { "name":"SOIL9_47610 unnamed protein product; BLAST_uniprot: no_hits\tK03559 exbD; biopolymer transport protein ExbD" }, { "name":"SOIL9_70180 biopolymer transport protein : Biopolymer transport protein ExbD\/TolR OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2618 PE=3 SV=1: ExbD\tK03560 tolR; biopolymer transport protein TolR" }, { "name":"SOIL9_51310 magnesium and cobalt transport protein : Putative magnesium and cobalt transport protein OS=uncultured Acidobacteria bacterium PE=4 SV=1: CorA\tK03284 corA; magnesium transporter" }, { "name":"SOIL9_74450 camphor resistance protein : Putative fluoride ion transporter CrcB OS=Prevotella oulorum F0390 GN=crcB PE=3 SV=1: CRCB\tK06199 crcB; fluoride exporter" }, { "name":"SOIL9_70010 Uncharacterized protein OS=Mariniradius saccharolyticus AK6 GN=C943_03754 PE=4 SV=1: Bestrophin\tK08994 yneE; ion channel-forming bestrophin family protein" }, { "name":"SOIL9_00660 Hemolysin OS=Mesorhizobium sp. L48C026A00 GN=X737_29910 PE=4 SV=1: DUF21: CBS\tK03699 tlyC; magnesium and cobalt exporter, CNNM family" }, { "name":"SOIL9_83680 Membrane protein OS=Brevibacillus laterosporus PE36 GN=P615_23895 PE=4 SV=1: DUF21: CBS\tK03699 tlyC; magnesium and cobalt exporter, CNNM family" }, { "name":"SOIL9_26860 Phosphate-selective porin OS=Desulfovibrio africanus PCS GN=PCS_03413 PE=4 SV=1: Porin_O_P\tK07221 oprO_P; phosphate-selective porin OprO and OprP" }, { "name":"SOIL9_41890 Phosphate-selective porin O and P OS=Desulfobacca acetoxidans (strain ATCC 700848 \/ DSM 11109 \/ ASRB2) GN=Desac_2826 PE=4 SV=1: Porin_O_P\tK07221 oprO_P; phosphate-selective porin OprO and OprP" }, { "name":"SOIL9_64840 Phosphate-selective porin O and P OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4368 PE=4 SV=1: Porin_O_P\tK07221 oprO_P; phosphate-selective porin OprO and OprP" }, { "name":"SOIL9_00680 outer membrane efflux protein : Outer membrane efflux protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1510 PE=4 SV=1: OEP: OEP\tK15725 czcC; outer membrane protein, heavy metal efflux system" }, { "name":"SOIL9_40670 outer membrane efflux protein : Outer membrane protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2946 PE=4 SV=1: OEP: OEP\tK15725 czcC; outer membrane protein, heavy metal efflux system" }, { "name":"SOIL9_47700 outer membrane efflux protein : Outer membrane efflux protein OS=Myxococcus sp. (contaminant ex DSM 436) GN=A176_03207 PE=4 SV=1: OEP: OEP\tK15725 czcC; outer membrane protein, heavy metal efflux system" }, { "name":"SOIL9_77230 outer membrane protein : Outer membrane efflux protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0341 PE=4 SV=1: OEP: OEP\tK15725 czcC; outer membrane protein, heavy metal efflux system" }, { "name":"SOIL9_07680 outer membrane efflux protein : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_09634 PE=4 SV=1: OEP\tK12340 tolC; outer membrane protein" }, { "name":"SOIL9_74150 membrane protein : Outer membrane protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6898 PE=4 SV=1: OEP: OEP\tK18139 oprM; outer membrane protein, multidrug efflux system" }, { "name":"SOIL9_09710 polysaccharide export protein : Wza OS=Blastopirellula marina DSM 3645 GN=DSM3645_28367 PE=4 SV=1: Poly_export\tK01991 wza; polysaccharide biosynthesis\/export protein" }, { "name":"SOIL9_28910 Polysaccharide export protein OS=Rhodopirellula maiorica SM1 GN=RMSM_06388 PE=4 SV=1: SLBB\tK01991 wza; polysaccharide biosynthesis\/export protein" }, { "name":"SOIL9_83070 polysaccharide export protein wza : Polysaccharide export protein Wza OS=Haematobacter missouriensis GN=CG51_11265 PE=4 SV=1: Poly_export\tK01991 wza; polysaccharide biosynthesis\/export protein" }, { "name":"SOIL9_83210 polysaccharide export protein : Polysaccharide export protein OS=Rhodopirellula maiorica SM1 GN=RMSM_04496 PE=4 SV=1: Poly_export: Poly_export\tK01991 wza; polysaccharide biosynthesis\/export protein" }, { "name":"SOIL9_35360 carbohydrate-selective porin : Carbohydrate-selective porin OprB OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD0649 PE=4 SV=1: OprB\tK07267 oprB; porin" }, { "name":"SOIL9_64830 carbohydrate-selective porin : Carbohydrate-selective porin OprB OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD0649 PE=4 SV=1: OprB\tK07267 oprB; porin" }, { "name":"SOIL9_77290 carbohydrate-selective porin : Carbohydrate-selective porin OprB OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD0649 PE=4 SV=1: OprB\tK07267 oprB; porin" }, { "name":"SOIL9_66880 outer membrane protein assembly protein : Surface antigen (D15) OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2663 PE=4 SV=1: Surf_Ag_VNR: Surf_Ag_VNR: Surf_Ag_VNR: Surf_Ag_VNR: Surf_Ag_VNR: Bac_surface_Ag\tK07277 SAM50; outer membrane protein insertion porin family" }, { "name":"SOIL9_02560 Pyrrolo-quinoline quinone OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD1224 PE=4 SV=1: PQQ_2: PQQ_2\tK17713 bamB; outer membrane protein assembly factor BamB" }, { "name":"SOIL9_02600 Pyrrolo-quinoline quinone OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD4382 PE=4 SV=1: PQQ_2\tK17713 bamB; outer membrane protein assembly factor BamB" }, { "name":"SOIL9_15300 FOG: WD40 repeat-like protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1270 PE=4 SV=1: PQQ_2\tK17713 bamB; outer membrane protein assembly factor BamB" }, { "name":"SOIL9_25170 FOG: WD40-like repeat-like protein OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD3629 PE=4 SV=1: PQQ_2\tK17713 bamB; outer membrane protein assembly factor BamB" }, { "name":"SOIL9_25180 Pyrrolo-quinoline quinone repeat-containing protein OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_0119 PE=4 SV=1: PQQ_3: PQQ_2\tK17713 bamB; outer membrane protein assembly factor BamB" }, { "name":"SOIL9_51070 serine threonine protein kinase : Probable serine\/threonine protein kinase OS=Planctomyces maris DSM 8797 GN=PM8797T_27337 PE=4 SV=1: PQQ_2\tK17713 bamB; outer membrane protein assembly factor BamB" }, { "name":"SOIL9_51400 FOG: WD40 repeat-like protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_0797 PE=4 SV=1: PQQ_2\tK17713 bamB; outer membrane protein assembly factor BamB" }, { "name":"SOIL9_58300 Marine sediment metagenome DNA, contig: S06H3_S18128 (Fragment) OS=marine sediment metagenome GN=S06H3_51460 PE=4 SV=1: PQQ_2\tK17713 bamB; outer membrane protein assembly factor BamB" }, { "name":"SOIL9_64400 Pyrrolo-quinoline quinone OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD3587 PE=4 SV=1: PQQ_2\tK17713 bamB; outer membrane protein assembly factor BamB" }, { "name":"SOIL9_64860 Pyrrolo-quinoline quinone OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2423 PE=4 SV=1: PQQ_2: PQQ_2\tK17713 bamB; outer membrane protein assembly factor BamB" }, { "name":"SOIL9_68470 Uncharacterized protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_4007 PE=4 SV=1: PQQ_2\tK17713 bamB; outer membrane protein assembly factor BamB" }, { "name":"SOIL9_80340 Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_17444 PE=4 SV=1: PQQ_3: PQQ_2\tK17713 bamB; outer membrane protein assembly factor BamB" }, { "name":"SOIL9_28900 Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1031 PE=4 SV=1: DUF3971: AsmA_2: AsmA_2: AsmA_2\tK09800 tamB; translocation and assembly module TamB" }, { "name":"SOIL9_41880 cadherin : Cadherin repeat protein OS=Haliscomenobacter hydrossis (strain ATCC 27775 \/ DSM 1100 \/ LMG 10767 \/ O) GN=Halhy_1831 PE=4 SV=1: VCBS: VCBS: Cadherin: Cadherin: Cadherin: Cadherin: Cadherin: Cadherin\tK21449 ata; trimeric autotransporter adhesin" }, { "name":"SOIL9_30880 amino acid permease : Uncharacterized protein OS=Sorangium cellulosum So0157-2 GN=SCE1572_45465 PE=4 SV=1: AA_permease_2\tK28029 UGA4; amino acid or GABA permease" }, { "name":"SOIL9_00900 heavy metal efflux family : Heavy metal efflux pump, CzcA family OS=Rhodopirellula sp. SWK7 GN=RRSWK_02570 PE=4 SV=1: ACR_tran: ACR_tran\tK15726 czcA; heavy metal efflux system protein" }, { "name":"SOIL9_12920 cation transporter : Heavy metal efflux pump, CzcA family OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1583 PE=4 SV=1: ACR_tran\tK15726 czcA; heavy metal efflux system protein" }, { "name":"SOIL9_23270 multidrug transporter : Uncharacterized protein OS=Hymenobacter sp. APR13 GN=N008_21445 PE=4 SV=1: ACR_tran: ACR_tran\tK15726 czcA; heavy metal efflux system protein" }, { "name":"SOIL9_40680 cytochrome c peroxidase : Putative silver efflux pump OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6760 PE=4 SV=1: ACR_tran: ACR_tran: ACR_tran\tK15726 czcA; heavy metal efflux system protein" }, { "name":"SOIL9_47680 acriflavin resistance protein : Acriflavin resistance protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_27698 PE=4 SV=1: ACR_tran\tK15726 czcA; heavy metal efflux system protein" }, { "name":"SOIL9_53320 cation transporter : Heavy metal efflux pump, CzcA family protein OS=Planctomyces maris DSM 8797 GN=PM8797T_01999 PE=4 SV=1: ACR_tran\tK15726 czcA; heavy metal efflux system protein" }, { "name":"SOIL9_77250 metal transporter : Heavy metal efflux pump, CzcA family OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0339 PE=4 SV=1: ACR_tran\tK15726 czcA; heavy metal efflux system protein" }, { "name":"SOIL9_01700 transporter : Efflux pump membrane transporter BepE OS=Methyloglobulus morosus KoM1 GN=bepE PE=4 SV=1: ACR_tran\tK18299 mexF; multidrug efflux pump" }, { "name":"SOIL9_08670 rnd transporter : Transporter, hydrophobe\/amphiphile efflux-1 (HAE1) family OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2288 PE=4 SV=1: ACR_tran\tK18299 mexF; multidrug efflux pump" }, { "name":"SOIL9_35100 transporter : Cation\/multidrug efflux pump OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7475 PE=4 SV=1: ACR_tran: ACR_tran\tK18299 mexF; multidrug efflux pump" }, { "name":"SOIL9_35110 rnd transporter : Cation\/multidrug efflux pump OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7474 PE=4 SV=1: ACR_tran: ACR_tran\tK18299 mexF; multidrug efflux pump" }, { "name":"SOIL9_47560 transporter : Cation\/multidrug efflux pump OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3859 PE=4 SV=1: ACR_tran: ACR_tran: ACR_tran\tK18299 mexF; multidrug efflux pump" }, { "name":"SOIL9_47570 transporter : Cation\/multidrug efflux pump OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7474 PE=4 SV=1: ACR_tran: ACR_tran\tK18299 mexF; multidrug efflux pump" }, { "name":"SOIL9_54910 rnd transporter : Transporter, hydrophobe\/amphiphile efflux-1 (HAE1) family OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2294 PE=4 SV=1: ACR_tran\tK18299 mexF; multidrug efflux pump" }, { "name":"SOIL9_54920 cation multidrug efflux pump : Transporter, hydrophobe\/amphiphile efflux-1 (HAE1) family OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2295 PE=4 SV=1: ACR_tran: ACR_tran\tK18299 mexF; multidrug efflux pump" }, { "name":"SOIL9_75270 rnd transporter : Transporter, hydrophobe\/amphiphile efflux-1 (HAE1) family OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2294 PE=4 SV=1: ACR_tran: ACR_tran\tK18299 mexF; multidrug efflux pump" }, { "name":"SOIL9_75280 cation multidrug efflux pump : Transporter, hydrophobe\/amphiphile efflux-1 (HAE1) family OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2295 PE=4 SV=1: ACR_tran: ACR_tran\tK18299 mexF; multidrug efflux pump" }, { "name":"SOIL9_04240 acriflavin resistance protein : Efflux system protein OS=Nitratireductor pacificus pht-3B GN=NA2_12493 PE=4 SV=1: ACR_tran\tK18303 mexK; multidrug efflux pump" }, { "name":"SOIL9_11990 hydrophobe amphiphile efflux-1 family : Transporter, hydrophobe\/amphiphile efflux-1 (HAE1) family OS=Rhodopirellula maiorica SM1 GN=RMSM_07794 PE=4 SV=1: ACR_tran: ACR_tran: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_18820 acriflavin resistance protein : Cation\/multidrug efflux pump OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2114 PE=4 SV=1: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_23820 acriflavin resistance protein : Acriflavin resistance protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1221 PE=4 SV=1: ACR_tran: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_26920 rnd transporter : Acriflavin resistance protein OS=Gloeobacter kilaueensis JS1 GN=GKIL_3115 PE=4 SV=1: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_66360 rnd transporter : Acriflavin resistance protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0559 PE=4 SV=1: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_74160 multidrug transporter : RND efflux system, inner membrane transporter CmeB OS=Sandaracinus amylolyticus GN=DB32_2324 PE=4 SV=1: ACR_tran: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_34580 acriflavin resistance protein : Acriflavin resistance protein OS=Geobacter uraniireducens (strain Rf4) GN=Gura_2371 PE=4 SV=1: ACR_tran\tK07788 mdtB; multidrug efflux pump" }, { "name":"SOIL9_20740 multidrug transporter : Quaternary ammonium compound resistance protein OS=gamma proteobacterium HdN1 GN=qacE2 PE=3 SV=1: Multi_Drug_Res\tK03297 emrE; small multidrug resistance pump" }, { "name":"SOIL9_21210 multidrug transporter : Small multidrug resistance protein OS=Serratia plymuthica PRI-2C GN=Q5A_16376 PE=3 SV=1: Multi_Drug_Res\tK11741 sugE; quaternary ammonium compound-resistance protein SugE" }, { "name":"SOIL9_51160 small multidrug resistance protein : Membrane transporter of cation and cationic drug OS=Ralstonia sp. PBA GN=MW7_1327 PE=3 SV=1: Multi_Drug_Res\tK11741 sugE; quaternary ammonium compound-resistance protein SugE" }, { "name":"SOIL9_70940 cation transporter : Small multidrug resistance protein OS=Sphingobacterium sp. (strain 21) GN=Sph21_3287 PE=3 SV=1: Multi_Drug_Res\tK11741 sugE; quaternary ammonium compound-resistance protein SugE" }, { "name":"SOIL9_31250 membrane protein : Uncharacterized protein OS=Sideroxydans lithotrophicus (strain ES-1) GN=Slit_0993 PE=4 SV=1: EamA\tK08978 TC.BAT1; bacterial\/archaeal transporter family protein" }, { "name":"SOIL9_32700 chloramphenical resistance permease : RarD protein OS=Aeromonas salmonicida (strain A449) GN=rarD PE=4 SV=1: EmrE: EamA\tK05786 rarD; chloramphenicol-sensitive protein RarD" }, { "name":"SOIL9_73250 Uncharacterized protein OS=uncultured bacterium PE=4 SV=1: DUF606\tK09936 TC.BAT2; bacterial\/archaeal transporter family-2 protein" }, { "name":"SOIL9_68230 l-lactate transport : Lactate transporter, LctP family OS=uncultured planctomycete GN=HGMM_F37F03C19 PE=4 SV=1: Lactate_perm\tK03303 lutP; lactate permease" }, { "name":"SOIL9_69210 sodium:calcium antiporter : Ca2+\/Na+ antiporter OS=planctomycete KSU-1 GN=KSU1_B0362 PE=4 SV=1: Na_Ca_ex: Na_Ca_ex\tK07301 yrbG; cation:H+ antiporter" }, { "name":"SOIL9_23560 sodium:proton antiporter : Na(+)\/H(+) antiporter NhaA OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=nhaA PE=3 SV=1: Na_H_antiport_1\tK03313 nhaA; Na+:H+ antiporter, NhaA family" }, { "name":"SOIL9_46520 na+ h+ antiporter : Na+\/H+ antiporter OS=Gloeobacter kilaueensis JS1 GN=GKIL_0560 PE=4 SV=1: Na_H_Exchanger\tK24163 nhaK; monovalent cation\/hydrogen antiporter" }, { "name":"SOIL9_25980 sodium:proton antiporter : Sodium\/proton antiporter, CPA1 family OS=Dechloromonas aromatica (strain RCB) GN=Daro_2072 PE=4 SV=1: Na_H_Exchanger\tK24160 NHA1; sodium\/hydrogen antiporter" }, { "name":"SOIL9_81150 sodium:proton antiporter : Sodium\/proton antiporter, CPA1 family OS=Dechloromonas aromatica (strain RCB) GN=Daro_2072 PE=4 SV=1: Na_H_Exchanger\tK24160 NHA1; sodium\/hydrogen antiporter" }, { "name":"SOIL9_14060 sodium hydrogen exchanger : Monovalent cation\/proton antiporter family protein OS=Geobacter sulfurreducens (strain ATCC 51573 \/ DSM 12127 \/ PCA) GN=GSU0261 PE=4 SV=1: Na_H_Exchanger: TrkA_N\tK26735 KEA4_5_6; K+:H+ antiporter" }, { "name":"SOIL9_08890 sodium:proton antiporter : Sodium\/hydrogen exchanger OS=Cyanothece sp. (strain PCC 8801) GN=PCC8801_1707 PE=4 SV=1: Na_H_Exchanger\tK26730 napA; Na+:H+ antiporter" }, { "name":"SOIL9_28100 sodium hydrogen exchanger : Putative cation transporter\/universal stress family protein OS=Stigmatella aurantiaca (strain DW4\/3-1) GN=STAUR_1138 PE=4 SV=1: Na_H_Exchanger\tK26731 CHX; K+:H+ antiporter" }, { "name":"SOIL9_30330 sodium hydrogen exchanger : Sodium\/hydrogen exchanger OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2302 PE=4 SV=1: Na_H_Exchanger\tK26731 CHX; K+:H+ antiporter" }, { "name":"SOIL9_71980 manganese transporter : Divalent metal cation transporter MntH OS=Brevibacillus laterosporus LMG 15441 GN=mntH_1 PE=3 SV=1: Nramp\tK03322 mntH; manganese transport protein" }, { "name":"SOIL9_37460 c4-dicarboxylate transporter : C4-dicarboxylate transporter OS=Nodularia spumigena CCY9414 GN=N9414_15717 PE=4 SV=1: DcuC: DcuC\tK03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family" }, { "name":"SOIL9_59010 peptide transporter : Oligopeptide transporter, OPT family OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2665 PE=4 SV=1: OPT: OPT\tK28868 K28868; oligopeptide transporter family protein" }, { "name":"SOIL9_10870 threonine transporter : Putative threonine efflux protein OS=Collimonas arenae GN=LT85_4873 PE=4 SV=1: LysE\tK05834 rhtB; homoserine\/homoserine lactone efflux protein" }, { "name":"SOIL9_56120 antibiotic resistance protein : Antibiotic resistance protein MarC OS=Burkholderia dolosa PC543 GN=BDSB_17615 PE=4 SV=1: MarC\tK05595 marC; multiple antibiotic resistance protein" }, { "name":"SOIL9_72320 carbon starvation protein : Carbon starvation protein CstA OS=uncultured planctomycete GN=HGMM_F09D09C24 PE=4 SV=1: CstA: CstA: DUF4161\tK06200 cstA; carbon starvation protein" }, { "name":"SOIL9_20240 planctomycete cytochrome c : Protein containing planctomycete cytochrome C domain protein OS=Rhodopirellula baltica SWK14 GN=RBSWK_03829 PE=4 SV=1: PSCyt1\tK03832 tonB; periplasmic protein TonB" }, { "name":"SOIL9_40760 translocation protein : Protein TolB OS=Hyalangium minutum GN=tolB PE=3 SV=1: PD40: PD40\tK03641 tolB; TolB protein" }, { "name":"SOIL9_57040 TolB protein OS=uncultured planctomycete GN=HGMM_F22C11C09 PE=4 SV=1: PD40: PD40: PD40: PD40: PD40: PD40\tK03641 tolB; TolB protein" }, { "name":"SOIL9_57830 peptidase m28 : WD40 domain protein beta Propeller OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4140 PE=4 SV=1: PD40: PD40: PD40: PD40\tK03641 tolB; TolB protein" }, { "name":"SOIL9_72350 potassium transporter : K(+)-insensitive pyrophosphate-energized proton pump OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=hppA PE=3 SV=1: H_PPase: H_PPase\tK15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]" }, { "name":"SOIL9_45960 unnamed protein product; BLAST_uniprot: no_hits\tK07311 ynfG; Tat-targeted selenate reductase subunit YnfG" }, { "name":"SOIL9_74240 secretion protein family protein : Multidrug resistance efflux pump OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2997 PE=4 SV=1: HlyD: HlyD\tK03543 emrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_00910 MchE protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_02569 PE=4 SV=1\tK15727 czcB; membrane fusion protein, heavy metal efflux system" }, { "name":"SOIL9_12930 efflux rnd mfp subunit : Efflux transporter, RND family, MFP subunit OS=Rhodopirellula europaea SH398 GN=RESH_06318 PE=4 SV=1: HlyD_2\tK15727 czcB; membrane fusion protein, heavy metal efflux system" }, { "name":"SOIL9_23280 secretion protein : Efflux transporter, RND family, MFP subunit OS=uncultured planctomycete GN=HGMM_F01A04C20 PE=4 SV=1: Biotin_lipoyl_2: HlyD_3: HlyD_2\tK15727 czcB; membrane fusion protein, heavy metal efflux system" }, { "name":"SOIL9_40690 membrane-fusion protein : Membrane-fusion protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6759 PE=4 SV=1: HlyD_2\tK15727 czcB; membrane fusion protein, heavy metal efflux system" }, { "name":"SOIL9_47690 RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0166 PE=4 SV=1: HlyD_3\tK15727 czcB; membrane fusion protein, heavy metal efflux system" }, { "name":"SOIL9_53310 Secretion protein HlyD OS=Rhodopirellula sp. SWK7 GN=RRSWK_02562 PE=4 SV=1: HlyD_2\tK15727 czcB; membrane fusion protein, heavy metal efflux system" }, { "name":"SOIL9_77240 Efflux transporter, RND family, MFP subunit OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0340 PE=4 SV=1: HlyD_2\tK15727 czcB; membrane fusion protein, heavy metal efflux system" }, { "name":"SOIL9_08680 rnd family efflux transporter mfp subunit : RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3860 PE=4 SV=1: HlyD\tK18298 mexE; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_35120 rnd transporter : RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7473 PE=4 SV=1: HlyD\tK18298 mexE; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_47580 rnd transporter mfp subunit : RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7473 PE=4 SV=1: HlyD\tK18298 mexE; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_54900 rnd family efflux transporter mfp subunit : Efflux transporter, RND family, MFP subunit OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2293 PE=4 SV=1: HlyD\tK18298 mexE; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_75260 rnd family efflux transporter mfp subunit : RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6016 PE=4 SV=1: HlyD\tK18298 mexE; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_04230 multidrug transporter : Putative Co\/Zn\/Cd efflux system membrane fusion protein OS=Rhodovulum sp. PH10 GN=A33M_4130 PE=4 SV=1: HlyD_2\tK18302 mexJ; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_18810 rnd family efflux transporter mfp subunit : RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0100 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_23810 rnd family efflux transporter mfp subunit : Efflux transporter, RND family, MFP subunit OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1220 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_26910 rnd transporter mfp subunit : Efflux transporter, RND family, MFP subunit OS=Burkholderia sp. (strain CCGE1002) GN=BC1002_5413 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_66350 rnd family efflux transporter mfp subunit : RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1026 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_74170 hemolysin d : Putative Co\/Zn\/Cd efflux system membrane fusion protein OS=Sandaracinus amylolyticus GN=DB32_2325 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_57050 acriflavin resistance protein : Uncharacterized protein OS=Alcanivorax sp. P2S70 GN=Q670_11590 PE=4 SV=1: HlyD\tK19586 oqxA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_34570 rnd transporter : Efflux transporter, RND family, MFP subunit OS=Desulfobacca acetoxidans (strain ATCC 700848 \/ DSM 11109 \/ ASRB2) GN=Desac_1403 PE=4 SV=1: HlyD\tK07799 mdtA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_20180 exopolysaccharide biosynthesis protein : Capsular exopolysaccharide biosynthesis protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5456 PE=4 SV=1: Wzz: AAA_31\tK16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]" }, { "name":"SOIL9_63380 protein-tyrosine kinase : Capsular exopolysaccharide biosynthesis protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2488 PE=4 SV=1: Wzz: AAA_31\tK16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]" }, { "name":"SOIL9_83200 exopolysaccharide biosynthesis protein : Capsular exopolysaccharide biosynthesis protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5456 PE=4 SV=1: AAA_31\tK16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]" }, { "name":"SOIL9_11970 family protein : FeoA family protein OS=Anaeromyxobacter dehalogenans (strain 2CP-1 \/ ATCC BAA-258) GN=A2cp1_3411 PE=4 SV=1: FeoA\tK04758 feoA; ferrous iron transport protein A" }, { "name":"SOIL9_11980 family protein : Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_10722 PE=4 SV=1: FeoA\tK04758 feoA; ferrous iron transport protein A" }, { "name":"SOIL9_11960 ferrous iron transport protein b : Ferrous iron transport protein b OS=Blastopirellula marina DSM 3645 GN=DSM3645_10732 PE=4 SV=1: FeoB_N: Gate: FeoB_C: Gate\tK04759 feoB; ferrous iron transport protein B" }, { "name":"SOIL9_17310 and mbr like protein : TspO and MBR like protein OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_3042 PE=4 SV=1: TspO_MBR\tK05770 TSPO; translocator protein" }, { "name":"SOIL9_19330 Scramblase family protein OS=Xanthomonas translucens pv. graminis ART-Xtg29 GN=XTG29_00653 PE=4 SV=1: Scramblase\tK27888 PLSCR; phospholipid scramblase" }, { "name":"SOIL9_08620 membrane protein : MgtC\/SapB transporter OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2817 PE=4 SV=1: MgtC\tK07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein" }, { "name":"SOIL9_60990 mg2+ transporter-family : MgtC family transporter protein OS=Candidatus Symbiobacter mobilis CR GN=Cenrod_0942 PE=4 SV=1: MgtC\tK07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein" }, { "name":"SOIL9_73960 Uncharacterized protein OS=Hydrocarboniphaga effusa AP103 GN=WQQ_19480 PE=4 SV=1: DUF202\tK00389 yidH; inner membrane protein YidH" } ] }, { "name":"02044 Secretion system [BR:gms02044]", "children":[ { "name":"SOIL9_07680 outer membrane efflux protein : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_09634 PE=4 SV=1: OEP\tK12340 tolC; outer membrane protein" }, { "name":"SOIL9_58860 general secretion pathway protein e : General secretion pathway protein E OS=Blastopirellula marina DSM 3645 GN=DSM3645_27388 PE=4 SV=1: T2SE_Nter: T2SE\tK02454 gspE; general secretion pathway protein E [EC:7.4.2.8]" }, { "name":"SOIL9_58850 type iv pilus biogenesis protein : Type II secretion system F domain protein OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_3183 PE=3 SV=1: T2SF: T2SF\tK02455 gspF; general secretion pathway protein F" }, { "name":"SOIL9_58840 general secretion pathway protein g : General secretion pathway protein G OS=Sphingobium yanoikuyae ATCC 51230 GN=HMPREF9718_03863 PE=4 SV=1: N_methyl_2: T2SG\tK02456 gspG; general secretion pathway protein G" }, { "name":"SOIL9_58830 tfp pilus assembly protein : Uncharacterized protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3670 PE=4 SV=1: N_methyl\tK02457 gspH; general secretion pathway protein H" }, { "name":"SOIL9_58820 Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_14304 PE=4 SV=1\tK02458 gspI; general secretion pathway protein I" }, { "name":"SOIL9_65950 type ii secretion system protein e : Type II secretion system protein E OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0408 PE=4 SV=1: T2SE_Nter: T2SE\tK02652 pilB; type IV pilus assembly protein PilB" }, { "name":"SOIL9_65970 type ii secretion system protein e : Type II secretion system protein E OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0410 PE=4 SV=1: T2SE_Nter: T2SE\tK02652 pilB; type IV pilus assembly protein PilB" }, { "name":"SOIL9_65940 type iv fimbrial assembly protein : Type II secretory pathway, component PulF OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6457 PE=4 SV=1: T2SF: T2SF\tK02653 pilC; type IV pilus assembly protein PilC" }, { "name":"SOIL9_11500 twitching motility protein : Pilus retraction protein PilT OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5249 PE=4 SV=1: T2SE\tK02669 pilT; twitching motility protein PilT" }, { "name":"SOIL9_12630 twitching motility protein : Uncharacterized protein OS=uncultured bacterium GN=ACD_38C00035G0004 PE=4 SV=1: T2SE\tK02669 pilT; twitching motility protein PilT" }, { "name":"SOIL9_65960 twitching motility protein : Twitching motility protein OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_2546 PE=4 SV=1: T2SE\tK02669 pilT; twitching motility protein PilT" }, { "name":"SOIL9_59860 peptidase a24a prepilin type iv : Type IV prepilin peptidase CpaA-like protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_06439 PE=4 SV=1: Peptidase_A24\tK02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]" }, { "name":"SOIL9_59880 Flp pilus assembly protein CpaB OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_1524 PE=4 SV=1: SAF_2: SAF\tK02279 cpaB; pilus assembly protein CpaB" }, { "name":"SOIL9_59890 type ii and iii secretion system protein : Type II and III secretion system protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2076 PE=4 SV=1: Secretin\tK02280 cpaC; pilus assembly protein CpaC" }, { "name":"SOIL9_59900 response regulator receiver protein : Response regulator receiver protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2077 PE=4 SV=1: Response_reg: AAA_31\tK02282 cpaE; pilus assembly protein CpaE" }, { "name":"SOIL9_63820 Uncharacterized protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_3714 PE=4 SV=1: AAA_31\tK02282 cpaE; pilus assembly protein CpaE" }, { "name":"SOIL9_59910 type ii secretion system protein e : Type II secretion system protein E OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1434 PE=4 SV=1: T2SE\tK02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]" }, { "name":"SOIL9_63830 type ii secretion system protein e : Type II secretion system protein E OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1434 PE=4 SV=1: T2SE\tK02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]" }, { "name":"SOIL9_77010 Type II\/IV secretion system protein, TadA subfamily protein OS=Rhodopirellula maiorica SM1 GN=RMSM_05347 PE=4 SV=1\tK02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]" }, { "name":"SOIL9_59920 Type II secretion system protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1433 PE=4 SV=1: T2SF\tK12510 tadB; tight adherence protein B" }, { "name":"SOIL9_59930 Type II secretion system F domain protein OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_2386 PE=4 SV=1: T2SF\tK12511 tadC; tight adherence protein C" }, { "name":"SOIL9_65370 TadE-like protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7490 PE=4 SV=1: TadE\tK12513 tadE; tight adherence protein E" }, { "name":"SOIL9_65380 TadE-like protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7489 PE=4 SV=1: TadE\tK12513 tadE; tight adherence protein E" }, { "name":"SOIL9_26350 Flp\/Fap pilin component OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0134 PE=4 SV=1: Flp_Fap\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"SOIL9_32450 Flp\/Fap pilin component OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0134 PE=4 SV=1: Flp_Fap\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"SOIL9_32460 Flp\/Fap pilin component OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0134 PE=4 SV=1: Flp_Fap\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"SOIL9_59840 Flp\/Fap pilin component OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0134 PE=4 SV=1: Flp_Fap\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"SOIL9_59850 Flp\/Fap pilin component OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0134 PE=4 SV=1: Flp_Fap\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"SOIL9_06810 Probable competence protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_19957 PE=4 SV=1: DUF4131: Competence: Lactamase_B\tK02238 comEC; competence protein ComEC" }, { "name":"SOIL9_13390 flagellar biosynthesis protein : Flagellar biosynthesis protein FlhA OS=uncultured planctomycete GN=HGMM_F11F07C14 PE=4 SV=1: FHIPEP\tK02400 flhA; flagellar biosynthesis protein FlhA" }, { "name":"SOIL9_13400 flagellar biosynthesis protein : Flagellar biosynthetic protein FlhB OS=Deferribacter desulfuricans (strain DSM 14783 \/ JCM 11476 \/ NBRC 101012 \/ SSM1) GN=flhB PE=4 SV=1: Bac_export_2\tK02401 flhB; flagellar biosynthesis protein FlhB" }, { "name":"SOIL9_13560 domain-containing protein : Flagellar biosynthesis-like protein OS=Paenibacillus larvae subsp. larvae DSM 25430 GN=ERIC2_c21890 PE=4 SV=1: Bac_export_2\tK04061 flhB2; flagellar biosynthesis protein" }, { "name":"SOIL9_13510 flagellar m-ring protein : Flagellar M-ring protein OS=Candidatus Methylomirabilis oxyfera GN=fliF PE=3 SV=1: YscJ_FliF: YscJ_FliF_C\tK02409 fliF; flagellar M-ring protein FliF" }, { "name":"SOIL9_13490 Flagellar assembly protein FliH\/Type III secretion system HrpE OS=Terriglobus saanensis (strain ATCC BAA-1853 \/ DSM 23119 \/ SP1PR4) GN=AciPR4_1814 PE=4 SV=1: FliH\tK02411 fliH; flagellar assembly protein FliH" }, { "name":"SOIL9_13480 atp synthase : Flagellum-specific ATP synthase FliI OS=Clostridium acidurici (strain ATCC 7906 \/ DSM 604 \/ KCTC 5404 \/ 9a) GN=fliI PE=4 SV=1: ATP-synt_ab_N: ATP-synt_ab\tK02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]" }, { "name":"SOIL9_13280 flagellar motor switch protein : Flagellar motor switch protein FliY OS=Lactobacillus mali KCTC 3596 = DSM 20444 GN=fliY PE=4 SV=1: SpoA\tK02417 fliN; flagellar motor switch protein FliN" }, { "name":"SOIL9_13290 : FliO\tK02418 fliO; flagellar protein FliO\/FliZ" }, { "name":"SOIL9_13450 flagellar biosynthesis protein :\tK02418 fliO; flagellar protein FliO\/FliZ" }, { "name":"SOIL9_13430 flagellar biosynthesis protein : Flagellar biosynthetic protein FliP OS=uncultured planctomycete GN=HGMM_F11F07C18 PE=3 SV=1: FliP\tK02419 fliP; flagellar biosynthesis protein FliP" }, { "name":"SOIL9_13420 flagellar biosynthetic protein : Flagellar biosynthesis protein FliQ OS=Clostridium ljungdahlii (strain ATCC 55383 \/ DSM 13528 \/ PETC) GN=fliQ PE=4 SV=1: Bac_export_3\tK02420 fliQ; flagellar biosynthesis protein FliQ" }, { "name":"SOIL9_13410 flagellar biosynthesis protein : Flagellar biosynthetic protein fliR OS=Clostridium sp. CAG:253 GN=BN565_01317 PE=3 SV=1: Bac_export_1\tK02421 fliR; flagellar biosynthesis protein FliR" }, { "name":"SOIL9_85180 Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_11302 PE=4 SV=1: DUF2077\tK11892 impK; type VI secretion system protein ImpK" }, { "name":"SOIL9_85170 Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_11746 PE=4 SV=1: DUF876\tK11893 impJ; type VI secretion system protein ImpJ" }, { "name":"SOIL9_82670 Uncharacterized protein OS=Candidatus Nitrospira defluvii GN=NIDE1984 PE=4 SV=1: DUF1305\tK11895 impH; type VI secretion system protein ImpH" }, { "name":"SOIL9_82680 Uncharacterized protein OS=Azospirillum lipoferum (strain 4B) GN=AZOLI_1005 PE=4 SV=1: DUF879\tK11896 impG; type VI secretion system protein ImpG" }, { "name":"SOIL9_82690 Type VI secretion system lysozyme-related protein OS=Teredinibacter turnerae (strain ATCC 39867 \/ T7901) GN=TERTU_1652 PE=4 SV=1: GPW_gp25\tK11897 impF; type VI secretion system protein ImpF" }, { "name":"SOIL9_82720 Type VI secretion system family protein OS=Acidiphilium multivorum (strain DSM 11245 \/ JCM 8867 \/ AIU301) GN=ACMV_34170 PE=4 SV=1: DUF877\tK11900 impC; type VI secretion system protein ImpC" }, { "name":"SOIL9_82730 Uncharacterized protein OS=Azospirillum lipoferum (strain 4B) GN=AZOLI_1010 PE=4 SV=1: DUF770\tK11901 impB; type VI secretion system protein ImpB" }, { "name":"SOIL9_82740 Type VI secretion-associated protein, ImpA family OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_1734 PE=4 SV=1: ImpA-rel_N\tK11902 impA; type VI secretion system protein ImpA" }, { "name":"SOIL9_79170 Uncharacterized protein OS=Azospirillum lipoferum (strain 4B) GN=AZOLI_1016 PE=4 SV=1: DUF796\tK11903 hcp; type VI secretion system secreted protein Hcp" }, { "name":"SOIL9_79160 Uncharacterized protein OS=Azorhizobium caulinodans (strain ATCC 43989 \/ DSM 5975 \/ ORS 571) GN=AZC_2592 PE=4 SV=1: Phage_GPD: Phage_base_V\tK11904 vgrG; type VI secretion system secreted protein VgrG" }, { "name":"SOIL9_67410 atpase aaa : Type VI secretion system family protein OS=Acidocella sp. MX-AZ02 GN=MXAZACID_08861 PE=4 SV=1: Clp_N: AAA: AAA_2: ClpB_D2-small\tK11907 vasG; type VI secretion system protein VasG" }, { "name":"SOIL9_66550 virulence protein type : Protein of avirulence locus involved in temperature-dependent protein secretion OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2413 PE=4 SV=1: TPR_19: ImpE\tK11898 impE; type VI secretion system protein ImpE" }, { "name":"SOIL9_82700 Uncharacterized protein OS=Azorhizobium caulinodans (strain ATCC 43989 \/ DSM 5975 \/ ORS 571) GN=AZC_2602 PE=4 SV=1: ImpE\tK11898 impE; type VI secretion system protein ImpE" }, { "name":"SOIL9_82710 Type VI secretion protein, EvpB\/VC_A0108 family OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_1737 PE=4 SV=1: DUF877\tK11899 impD; type VI secretion system protein ImpD" }, { "name":"SOIL9_31690 serine threonine protein kinase : Putative serine\/threonine protein kinase OS=Gemmata sp. Wa1-1 PE=4 SV=1: Pkinase\tK11912 ppkA; serine\/threonine-protein kinase PpkA [EC:2.7.11.1]" }, { "name":"SOIL9_72400 preprotein translocase subunit : Protein translocase subunit SecA OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=secA PE=3 SV=1: SecA_DEAD: SecA_PP_bind: SecA_SW: SecA_SW: SEC-C\tK03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]" }, { "name":"SOIL9_76520 preprotein translocase subunit : Protein translocase subunit SecA OS=uncultured planctomycete GN=secA PE=3 SV=1: SecA_DEAD: SecA_PP_bind\tK03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]" }, { "name":"SOIL9_50320 protein-export membrane protein secd : Protein-export membrane protein SecD OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1349 PE=3 SV=1: SecD_SecF: SecD_SecF\tK12257 secDF; SecD\/SecF fusion protein" }, { "name":"SOIL9_84220 unnamed protein product; BLAST_uniprot: no_hits\tK03073 secE; preprotein translocase subunit SecE" }, { "name":"SOIL9_59730 preprotein translocase subunit : : SecG\tK03075 secG; preprotein translocase subunit SecG" }, { "name":"SOIL9_84770 preprotein translocase subunit : Protein translocase subunit SecY OS=Planctomyces maris DSM 8797 GN=secY PE=3 SV=1: SecY\tK03076 secY; preprotein translocase subunit SecY" }, { "name":"SOIL9_40150 signal recognition particle protein : Signal recognition particle protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=ffh PE=3 SV=1: SRP54_N: SRP54: SRP_SPB\tK03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]" }, { "name":"SOIL9_22370 cell division protein : Signal recognition particle receptor FtsY OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ftsY PE=3 SV=1: SRP54_N: SRP54\tK03110 ftsY; fused signal recognition particle receptor" }, { "name":"SOIL9_50330 Preprotein translocase subunit YajC OS=Hyphomonas johnsonii MHS-2 GN=HJO_05365 PE=4 SV=1: YajC\tK03210 yajC; preprotein translocase subunit YajC" }, { "name":"SOIL9_46890 60 kda inner membrane insertion protein : Membrane protein insertase YidC OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=yidC PE=3 SV=1: YidC_periplas: 60KD_IMP\tK03217 yidC; YidC\/Oxa1 family membrane protein insertase" }, { "name":"SOIL9_25690 twin-arginine translocation e family subunit : Sec-independent protein translocase protein TatA OS=Phycisphaera mikurensis (strain NBRC 102666 \/ KCTC 22515 \/ FYK2301M01) GN=tatA PE=3 SV=1: MttA_Hcf106\tK03116 tatA; sec-independent protein translocase protein TatA" }, { "name":"SOIL9_00100 unnamed protein product; BLAST_uniprot: no_hits\tK03117 tatB; sec-independent protein translocase protein TatB" }, { "name":"SOIL9_34100 sec-independent protein subunit : Sec-independent protein translocase protein TatC OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=tatC PE=3 SV=1: TatC\tK03118 tatC; sec-independent protein translocase protein TatC" } ] }, { "name":"02042 Bacterial toxins [BR:gms02042]", "children":[ { "name":"SOIL9_00660 Hemolysin OS=Mesorhizobium sp. L48C026A00 GN=X737_29910 PE=4 SV=1: DUF21: CBS\tK03699 tlyC; magnesium and cobalt exporter, CNNM family" }, { "name":"SOIL9_83680 Membrane protein OS=Brevibacillus laterosporus PE36 GN=P615_23895 PE=4 SV=1: DUF21: CBS\tK03699 tlyC; magnesium and cobalt exporter, CNNM family" }, { "name":"SOIL9_10430 hemolysin iii family channel protein : Hemolysin III family channel protein OS=Tumebacillus flagellatus GN=EL26_07930 PE=4 SV=1: HlyIII\tK11068 hlyIII; hemolysin III" } ] }, { "name":"02022 Two-component system [BR:gms02022]", "children":[ { "name":"SOIL9_03140 family transcriptional regulator : Two component transcriptional regulator, winged helix family OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0022 PE=4 SV=1: Response_reg: Trans_reg_C\tK07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB" }, { "name":"SOIL9_78390 histidine kinase : Histidine kinase OS=Hyphomicrobium denitrificans 1NES1 GN=HYPDE_40403 PE=4 SV=1: 2CSK_N: HAMP: HisKA: HATPase_c\tK07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]" }, { "name":"SOIL9_24510 transcriptional regulator : Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0888 PE=4 SV=1: Response_reg: Trans_reg_C\tK07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR" }, { "name":"SOIL9_78400 transcriptional regulator : DNA-binding heavy metal response regulator (Fragment) OS=mine drainage metagenome GN=B2A_07583 PE=4 SV=1: Response_reg: Trans_reg_C\tK07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR" }, { "name":"SOIL9_02650 histidine kinase : Osmosensitive K+ channel His kinase sensor OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5539 PE=4 SV=1: KdpD: Usp\tK07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]" }, { "name":"SOIL9_84570 response regulator : Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7219 PE=4 SV=1: Response_reg: Trans_reg_C\tK11329 rpaB; two-component system, OmpR family, response regulator RpaB" }, { "name":"SOIL9_07770 family transcriptional regulator : Two component transcriptional regulator, winged helix family OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 \/ DSM 6725 \/ Z-1320) GN=Athe_0280 PE=4 SV=1: Response_reg: Trans_reg_C\tK02483 K02483; two-component system, OmpR family, response regulator" }, { "name":"SOIL9_20580 pas sensor protein : Uncharacterized protein OS=Asticcacaulis sp. AC466 GN=AEAC466_00120 PE=4 SV=1: Response_reg\tK02483 K02483; two-component system, OmpR family, response regulator" }, { "name":"SOIL9_47300 multi-sensor hybrid histidine kinase : Chemotaxis protein CheY OS=Burkholderia glathei GN=BG61_10730 PE=4 SV=1: Response_reg\tK02483 K02483; two-component system, OmpR family, response regulator" }, { "name":"SOIL9_57400 histidine kinase response regulator : Response regulator with-like receiver domain protein and winged-helix dna-binding domain protein OS=Leptolyngbya sp. Heron Island J GN=N836_10960 PE=4 SV=1: Response_reg\tK02483 K02483; two-component system, OmpR family, response regulator" }, { "name":"SOIL9_21440 response regulator with -like aaa-type and dna-binding domains : Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1278 PE=4 SV=1: Response_reg: Sigma54_activat: HTH_8\tK07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG" }, { "name":"SOIL9_09120 sensor protein : Histidine kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2375 PE=4 SV=1: HisKA: HATPase_c\tK07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]" }, { "name":"SOIL9_10510 histidine kinase : Histidine kinase OS=uncultured planctomycete GN=HGMM_F12C05C13 PE=4 SV=1: HisKA: HATPase_c\tK07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]" }, { "name":"SOIL9_40710 histidine kinase : Histidine kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1279 PE=4 SV=1: HisKA: HATPase_c\tK07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]" }, { "name":"SOIL9_50140 two sigma54 transcriptional fis family : Two component, sigma54 specific, transcriptional regulator, Fis family OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_3482 PE=4 SV=1: Response_reg: Sigma54_activat: HTH_8\tK07713 zraR; two-component system, NtrC family, response regulator HydG" }, { "name":"SOIL9_71850 two sigma54 fis family transcriptional regulator : Sigma54 specific transcriptional regulator, Fis family OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_4161 PE=4 SV=1: FHA: GAF_2: Sigma54_activat: HTH_8\tK07713 zraR; two-component system, NtrC family, response regulator HydG" }, { "name":"SOIL9_83140 fis family transcriptional regulator : Sigma-54 factor interaction domain-containing protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0139 PE=4 SV=1: Sigma54_activat: HTH_8\tK07713 zraR; two-component system, NtrC family, response regulator HydG" }, { "name":"SOIL9_09130 two sigma54 transcriptional fis family : Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2376 PE=4 SV=1: Response_reg: Sigma54_activat: HTH_8\tK07714 atoC; two-component system, NtrC family, response regulator AtoC" }, { "name":"SOIL9_19650 response regulator with -like aaa-type and dna-binding domains : Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1278 PE=4 SV=1: Response_reg: Sigma54_activat: HTH_8\tK07714 atoC; two-component system, NtrC family, response regulator AtoC" }, { "name":"SOIL9_39120 response regulator with -like aaa-type and dna-binding domains : Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7189 PE=4 SV=1: Response_reg: Sigma54_activat: HTH_8\tK07714 atoC; two-component system, NtrC family, response regulator AtoC" }, { "name":"SOIL9_72060 response regulator with -like aaa-type and dna-binding domains : Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7189 PE=4 SV=1: Response_reg: Sigma54_activat: HTH_8\tK07714 atoC; two-component system, NtrC family, response regulator AtoC" }, { "name":"SOIL9_61990 fis family transcriptional regulator : Sigma54 specific transcriptional regulator, Fis family OS=Anaeromyxobacter sp. (strain Fw109-5) GN=Anae109_1061 PE=4 SV=1: Sigma54_activat: HTH_8\tK10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD" }, { "name":"SOIL9_02660 multi-sensor signal transduction histidine kinase : Histidine kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5540 PE=4 SV=1: HAMP: PAS_4: HisKA: HATPase_c\tK11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]" }, { "name":"SOIL9_77180 multi-sensor signal transduction histidine kinase : Histidine kinase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2815 PE=4 SV=1: HAMP: HisKA: HATPase_c\tK11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]" }, { "name":"SOIL9_02670 chemotaxis protein : Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4685 PE=4 SV=1: Response_reg: Sigma54_activat: HTH_8\tK11384 algB; two-component system, NtrC family, response regulator AlgB" }, { "name":"SOIL9_77170 chemotaxis protein : Two component, sigma54 specific, transcriptional regulator, Fis family OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2814 PE=4 SV=1: Response_reg: Sigma54_activat: HTH_8\tK11384 algB; two-component system, NtrC family, response regulator AlgB" }, { "name":"SOIL9_27790 histidine kinase : Histidine kinase OS=Rhodopirellula maiorica SM1 GN=RMSM_05833 PE=4 SV=1: HisKA: HATPase_c\tK02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]" }, { "name":"SOIL9_38940 integral membrane sensor signal transduction histidine kinase : Histidine kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3191 PE=4 SV=1: HAMP: HisKA: HATPase_c\tK02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]" }, { "name":"SOIL9_05810 signal transduction histidine kinase : Histidine kinase OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3522 PE=4 SV=1: Hpt: H-kinase_dim\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_09790 chemotaxis protein : Histidine kinase OS=Desulfohalobium retbaense (strain DSM 5692) GN=Dret_0656 PE=4 SV=1: Hpt: Hpt: H-kinase_dim: HATPase_c: CheW\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_19500 chemotaxis protein : Histidine kinase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3074 PE=4 SV=1: Hpt: H-kinase_dim: HATPase_c: CheW: CheW\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_36700 chemotaxis protein : Histidine kinase OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3522 PE=4 SV=1: Hpt: H-kinase_dim: HATPase_c: CheW\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_51530 signal transduction histidine kinase : CheA signal transduction histidine kinase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=Anae109_2367 PE=4 SV=1: Hpt: HATPase_c: CheW: Response_reg\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_09780 fis family transcriptional regulator : Response regulator receiver protein OS=Gallionella capsiferriformans (strain ES-2) GN=Galf_1020 PE=4 SV=1: Response_reg\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SOIL9_09880 chemotaxis protein : Response regulator receiver protein OS=Arcobacter nitrofigilis (strain ATCC 33309 \/ DSM 7299 \/ LMG 7604 \/ NCTC 12251 \/ CI) GN=Arnit_0721 PE=4 SV=1: Response_reg\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SOIL9_19470 histidine kinase : Response regulator containing a CheY-like receiver domain and a GGDEF domain OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3686 PE=4 SV=1: Response_reg\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SOIL9_36650 response regulator receiver protein : Response regulator receiver protein OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3528 PE=4 SV=1: Response_reg\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SOIL9_09870 chemotaxis response regulator protein-glutamate methylesterase : Chemotaxis response regulator protein-glutamate methylesterase OS=Candidatus Methylomirabilis oxyfera GN=cheB PE=3 SV=1: Response_reg: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_19460 response regulator receiver modulated methylesterase : Chemotaxis response regulator protein-glutamate methylesterase OS=Candidatus Contendobacter odensis Run_B_J11 GN=cheB PE=3 SV=1: Response_reg: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_24180 chemotaxis protein : Uncharacterized protein OS=Asticcacaulis sp. AC466 GN=AEAC466_07295 PE=4 SV=1: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_36660 chemotaxis response regulator protein-glutamate methylesterase : Chemotaxis response regulator protein-glutamate methylesterase OS=Crinalium epipsammum PCC 9333 GN=cheB PE=3 SV=1: Response_reg: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_48600 chemotaxis protein : Chemotaxis protein CheB OS=Tolypothrix bouteillei VB521301 GN=DA73_11040 PE=4 SV=1: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_51520 chemotaxis protein : Chemotaxis response regulator protein-glutamate methylesterase OS=Herbaspirillum sp. CF444 GN=cheB PE=3 SV=1: Response_reg: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_48580 signal transduction histidine kinase with and activity : Protein-glutamate methylesterase OS=Anabaena variabilis (strain ATCC 29413 \/ PCC 7937) GN=Ava_0314 PE=4 SV=1: CheB_methylest: CheR_N: CheR: PAS_10\tK13924 cheBR; two-component system, chemotaxis family, CheB\/CheR fusion protein [EC:2.1.1.80 3.1.1.61]" }, { "name":"SOIL9_06390 signal transduction histidine kinase : Response regulator receiver domain protein OS=bacterium UASB270 GN=U27_04003 PE=4 SV=1: Hpt: HATPase_c: CheW: Response_reg\tK13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE" }, { "name":"SOIL9_06380 chemotaxis protein : Chemotaxis response regulator protein-glutamate methylesterase OS=Cyanothece sp. (strain PCC 8802) GN=cheB PE=3 SV=1: Response_reg: CheB_methylest\tK13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61]" }, { "name":"SOIL9_18220 sensor histidine kinase : ATPase OS=Microvirga aerilata GN=JH26_25195 PE=4 SV=1: PAS_2: GAF: PHY: HisKA: HATPase_c\tK11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]" }, { "name":"SOIL9_12780 pas domain s-box : Uncharacterized protein OS=uncultured bacterium GN=ACD_75C00961G0003 PE=4 SV=1: PAS_9: PAS_4: PAS_8: PAS_9: HisKA: HATPase_c: Response_reg\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"SOIL9_13580 pas pac sensor hybrid histidine kinase : PAS\/PAC sensor hybrid histidine kinase OS=Haliangium ochraceum (strain DSM 14365 \/ JCM 11303 \/ SMP-2) GN=Hoch_2685 PE=4 SV=1: PAS_8: PAS_4: HisKA: HATPase_c: Response_reg\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"SOIL9_15640 multi-sensor hybrid histidine kinase : PAS\/PAC sensor hybrid histidine kinase OS=uncultured bacterium GN=ACD_75C00374G0005 PE=4 SV=1: PAS_4: PAS_3: PAS_8: PAS_3: HisKA: HATPase_c: Response_reg\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"SOIL9_18140 pas pac sensor hybrid histidine kinase : Histidine kinase OS=uncultured planctomycete GN=HGMM_F01A04C16 PE=4 SV=1: PAS_4: HisKA: HATPase_c: Response_reg\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"SOIL9_40410 pas pac sensor hybrid histidine kinase : Sensor histidine kinase response regulator, PAS and PAS domain-containing OS=Geobacter bemidjiensis (strain Bem \/ ATCC BAA-1014 \/ DSM 16622) GN=Gbem_3878 PE=4 SV=1: PAS_9: PAS_8: PAS_4: HisKA: HATPase_c: Response_reg\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"SOIL9_47350 multi-sensor hybrid histidine kinase : Multi-sensor hybrid histidine kinase OS=Spirochaeta smaragdinae (strain DSM 11293 \/ JCM 15392 \/ SEBR 4228) GN=Spirs_1827 PE=4 SV=1: Response_reg: PAS_4: HisKA: HATPase_c: Response_reg\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"SOIL9_80180 pas pac sensor hybrid histidine kinase : PAS\/PAC sensor hybrid histidine kinase OS=Caldithrix abyssi DSM 13497 GN=Calab_2608 PE=4 SV=1: PAS: PAS: PAS_3: HisKA: HATPase_c: Response_reg\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"SOIL9_25920 fis family transcriptional regulator : Marine sediment metagenome DNA, contig: S01H1_S18739 (Fragment) OS=marine sediment metagenome GN=S01H1_51886 PE=4 SV=1: Response_reg\tK13041 ttrR; two-component system, LuxR family, response regulator TtrR" }, { "name":"SOIL9_28340 histidine kinase : Signal transduction histidine kinase, nitrogen specific, NtrB OS=uncultured bacterium GN=ACD_75C00451G0002 PE=4 SV=1: PAS_9: HisKA: HATPase_c\tK14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]" }, { "name":"SOIL9_69510 response regulator receiver protein : Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6217 PE=4 SV=1: Response_reg\tK22010 pdtaR; two-component system, response regulator PdtaR" }, { "name":"SOIL9_34310 signal transduction histidine kinase : PAS domain S-box OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7544 PE=4 SV=1: HAMP: PAS_9: HisKA: HATPase_c: Response_reg: Response_reg: Hpt\tK11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]" } ] }, { "name":"02035 Bacterial motility proteins [BR:gms02035]", "children":[ { "name":"SOIL9_05810 signal transduction histidine kinase : Histidine kinase OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3522 PE=4 SV=1: Hpt: H-kinase_dim\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_09790 chemotaxis protein : Histidine kinase OS=Desulfohalobium retbaense (strain DSM 5692) GN=Dret_0656 PE=4 SV=1: Hpt: Hpt: H-kinase_dim: HATPase_c: CheW\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_19500 chemotaxis protein : Histidine kinase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3074 PE=4 SV=1: Hpt: H-kinase_dim: HATPase_c: CheW: CheW\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_36700 chemotaxis protein : Histidine kinase OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3522 PE=4 SV=1: Hpt: H-kinase_dim: HATPase_c: CheW\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_51530 signal transduction histidine kinase : CheA signal transduction histidine kinase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=Anae109_2367 PE=4 SV=1: Hpt: HATPase_c: CheW: Response_reg\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SOIL9_09170 chemotaxis protein : Chemotaxis signal transduction protein CheW OS=Candidatus Nitrospira defluvii GN=cheW PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_09800 chemotaxis protein : Chemotaxis signal transduction protein CheW OS=Candidatus Nitrospira defluvii GN=cheW PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_14590 chemotaxis protein : Chemotaxis signal transduction protein CheW OS=Candidatus Nitrospira defluvii GN=cheW PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_19490 chemotaxis protein : CheW protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3073 PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_21460 chemotaxis protein : Chemotaxis signal transduction protein CheW OS=Candidatus Nitrospira defluvii GN=cheW PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_36690 chemotaxis protein : CheW protein OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3523 PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_47150 chemotaxis protein : Chemotaxis signal transduction protein CheW OS=Candidatus Nitrospira defluvii GN=cheW PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_51550 chemotaxis protein : Putative chemotaxis signal transduction protein CheW OS=Actinoplanes friuliensis DSM 7358 GN=AFR_25675 PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_51570 chemotaxis protein : Uncharacterized protein OS=Pseudogulbenkiania ferrooxidans EGD-HP2 GN=O166_02540 PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_71720 chemotaxis protein : Chemotaxis signal transduction protein CheW OS=Candidatus Nitrospira defluvii GN=cheW PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_74480 chemotaxis protein : Chemotaxis signal transduction protein CheW OS=Candidatus Nitrospira defluvii GN=cheW PE=4 SV=1: CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SOIL9_09890 CheC domain protein OS=Hippea maritima (strain ATCC 700847 \/ DSM 10411 \/ MH2) GN=Hipma_0355 PE=4 SV=1: CheX\tK03409 cheX; chemotaxis protein CheX" }, { "name":"SOIL9_19440 : CheX\tK03409 cheX; chemotaxis protein CheX" }, { "name":"SOIL9_05820 CheC, inhibitor of MCP methylation OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3530 PE=4 SV=1\tK03410 cheC; chemotaxis protein CheC" }, { "name":"SOIL9_36640 inhibitor of mcp methylation : CheC, inhibitor of MCP methylation OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3530 PE=4 SV=1: CheC\tK03410 cheC; chemotaxis protein CheC" }, { "name":"SOIL9_09860 chemotaxis protein : Chemotaxis protein methyltransferase OS=Candidatus Methylomirabilis oxyfera GN=cheR PE=4 SV=1: CheR_N: CheR: CheD\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"SOIL9_19450 chemotaxis protein : MCP methyltransferase, CheR-type OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3069 PE=4 SV=1: CheR_N: CheR\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"SOIL9_24190 chemotaxis protein : Methylase of chemotaxis methyl-accepting protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0284 PE=4 SV=1: CheR_N: CheR\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"SOIL9_36670 chemotaxis protein : CheR Chemotaxis protein methyltransferase, MCP methyltransferase, Protein-glutamate O-methyltransferase_ OS=Arthrospira sp. PCC 8005 GN=cheR1 PE=4 SV=1: CheR_N: CheR\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"SOIL9_51560 protein-glutamate o-methyltransferase : Protein-glutamate O-methyltransferase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=Anae109_2370 PE=4 SV=1: CheR\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"SOIL9_09870 chemotaxis response regulator protein-glutamate methylesterase : Chemotaxis response regulator protein-glutamate methylesterase OS=Candidatus Methylomirabilis oxyfera GN=cheB PE=3 SV=1: Response_reg: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_19460 response regulator receiver modulated methylesterase : Chemotaxis response regulator protein-glutamate methylesterase OS=Candidatus Contendobacter odensis Run_B_J11 GN=cheB PE=3 SV=1: Response_reg: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_24180 chemotaxis protein : Uncharacterized protein OS=Asticcacaulis sp. AC466 GN=AEAC466_07295 PE=4 SV=1: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_36660 chemotaxis response regulator protein-glutamate methylesterase : Chemotaxis response regulator protein-glutamate methylesterase OS=Crinalium epipsammum PCC 9333 GN=cheB PE=3 SV=1: Response_reg: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_48600 chemotaxis protein : Chemotaxis protein CheB OS=Tolypothrix bouteillei VB521301 GN=DA73_11040 PE=4 SV=1: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_51520 chemotaxis protein : Chemotaxis response regulator protein-glutamate methylesterase OS=Herbaspirillum sp. CF444 GN=cheB PE=3 SV=1: Response_reg: CheB_methylest\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SOIL9_48580 signal transduction histidine kinase with and activity : Protein-glutamate methylesterase OS=Anabaena variabilis (strain ATCC 29413 \/ PCC 7937) GN=Ava_0314 PE=4 SV=1: CheB_methylest: CheR_N: CheR: PAS_10\tK13924 cheBR; two-component system, chemotaxis family, CheB\/CheR fusion protein [EC:2.1.1.80 3.1.1.61]" }, { "name":"SOIL9_09780 fis family transcriptional regulator : Response regulator receiver protein OS=Gallionella capsiferriformans (strain ES-2) GN=Galf_1020 PE=4 SV=1: Response_reg\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SOIL9_09880 chemotaxis protein : Response regulator receiver protein OS=Arcobacter nitrofigilis (strain ATCC 33309 \/ DSM 7299 \/ LMG 7604 \/ NCTC 12251 \/ CI) GN=Arnit_0721 PE=4 SV=1: Response_reg\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SOIL9_19470 histidine kinase : Response regulator containing a CheY-like receiver domain and a GGDEF domain OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3686 PE=4 SV=1: Response_reg\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SOIL9_36650 response regulator receiver protein : Response regulator receiver protein OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3528 PE=4 SV=1: Response_reg\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SOIL9_06130 chemotaxis protein : Methyl-accepting chemotaxis sensory transducer OS=Rhodothermus marinus (strain ATCC 43812 \/ DSM 4252 \/ R-10) GN=Rmar_2782 PE=4 SV=1: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_06150 chemotaxis partial : Chemotaxis protein OS=Burkholderia sp. MP-1 GN=BG58_15470 PE=4 SV=1: 4HB_MCP_1: HAMP: PAS_9: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_06160 chemotaxis protein : Methyl-accepting chemotaxis sensory transducer OS=Thiorhodospira sibirica ATCC 700588 GN=ThisiDRAFT_1409 PE=4 SV=1: 4HB_MCP_1: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_09180 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_09810 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_09820 chemotaxis protein : Chemotaxis protein OS=Listonella anguillarum M3 GN=N175_16910 PE=4 SV=1: DUF3365: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_09830 chemotaxis protein : Methyl-accepting chemotaxis protein OS=Desulfovibrio africanus PCS GN=PCS_01416 PE=4 SV=1: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_15130 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_19480 methyl-accepting chemotaxis sensory transducer with pas pac sensor : Methyl-accepting chemotaxis sensory transducer with Pas\/Pac sensor OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3072 PE=4 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_21450 chemotaxis protein : Histidine kinase, HAMP region:chemotaxis sensory transducer OS=Candidatus Methylomirabilis oxyfera GN=DAMO_1725 PE=4 SV=1: 4HB_MCP_1: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_32910 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_36680 methyl-accepting chemotaxis protein : Methyl-accepting chemotaxis sensory transducer OS=Crinalium epipsammum PCC 9333 GN=Cri9333_3524 PE=4 SV=1: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_45440 chemotaxis protein : Methyl-accepting chemotaxis (MCP) signaling domain protein OS=Vibrio cholerae CP1047(20) GN=VCCP1047_2988 PE=4 SV=1: 4HB_MCP_1: HAMP: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_47160 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_57150 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_60830 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_70440 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_71690 chemotaxis partial : Globin-coupled methyl-accepting chemotaxis protein (Modular protein) OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_74490 chemotaxis protein : Histidine kinase, HAMP region:chemotaxis sensory transducer OS=Candidatus Methylomirabilis oxyfera GN=DAMO_1725 PE=4 SV=1: 4HB_MCP_1: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_77260 chemotaxis partial : Putative methyl-accepting chemotaxis protein (MCP) with multiple PAS domains OS=Bradyrhizobium sp. ORS 375 GN=BRAO375_800034 PE=4 SV=1: 4HB_MCP_1: HAMP: PAS_9: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_85740 chemotaxis protein : Histidine kinase, HAMP region:chemotaxis sensory transducer OS=Candidatus Methylomirabilis oxyfera GN=DAMO_1725 PE=4 SV=1: 4HB_MCP_1: HAMP: MCPsignal\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SOIL9_13490 Flagellar assembly protein FliH\/Type III secretion system HrpE OS=Terriglobus saanensis (strain ATCC BAA-1853 \/ DSM 23119 \/ SP1PR4) GN=AciPR4_1814 PE=4 SV=1: FliH\tK02411 fliH; flagellar assembly protein FliH" }, { "name":"SOIL9_13480 atp synthase : Flagellum-specific ATP synthase FliI OS=Clostridium acidurici (strain ATCC 7906 \/ DSM 604 \/ KCTC 5404 \/ 9a) GN=fliI PE=4 SV=1: ATP-synt_ab_N: ATP-synt_ab\tK02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]" }, { "name":"SOIL9_13470 flagellar export protein : : FliJ\tK02413 fliJ; flagellar protein FliJ" }, { "name":"SOIL9_13290 : FliO\tK02418 fliO; flagellar protein FliO\/FliZ" }, { "name":"SOIL9_13450 flagellar biosynthesis protein :\tK02418 fliO; flagellar protein FliO\/FliZ" }, { "name":"SOIL9_13430 flagellar biosynthesis protein : Flagellar biosynthetic protein FliP OS=uncultured planctomycete GN=HGMM_F11F07C18 PE=3 SV=1: FliP\tK02419 fliP; flagellar biosynthesis protein FliP" }, { "name":"SOIL9_13420 flagellar biosynthetic protein : Flagellar biosynthesis protein FliQ OS=Clostridium ljungdahlii (strain ATCC 55383 \/ DSM 13528 \/ PETC) GN=fliQ PE=4 SV=1: Bac_export_3\tK02420 fliQ; flagellar biosynthesis protein FliQ" }, { "name":"SOIL9_13410 flagellar biosynthesis protein : Flagellar biosynthetic protein fliR OS=Clostridium sp. CAG:253 GN=BN565_01317 PE=3 SV=1: Bac_export_1\tK02421 fliR; flagellar biosynthesis protein FliR" }, { "name":"SOIL9_13390 flagellar biosynthesis protein : Flagellar biosynthesis protein FlhA OS=uncultured planctomycete GN=HGMM_F11F07C14 PE=4 SV=1: FHIPEP\tK02400 flhA; flagellar biosynthesis protein FlhA" }, { "name":"SOIL9_13400 flagellar biosynthesis protein : Flagellar biosynthetic protein FlhB OS=Deferribacter desulfuricans (strain DSM 14783 \/ JCM 11476 \/ NBRC 101012 \/ SSM1) GN=flhB PE=4 SV=1: Bac_export_2\tK02401 flhB; flagellar biosynthesis protein FlhB" }, { "name":"SOIL9_13500 flagellar motor switch protein : Flagellar motor switch protein FliG OS=Rhodothermus marinus (strain ATCC 43812 \/ DSM 4252 \/ R-10) GN=Rmar_0789 PE=4 SV=1: FliG_M: FliG_C\tK02410 fliG; flagellar motor switch protein FliG" }, { "name":"SOIL9_13270 Flagellar motor switch protein FliM OS=Moorella thermoacetica (strain ATCC 39073) GN=Moth_0804 PE=4 SV=1: SpoA\tK02416 fliM; flagellar motor switch protein FliM" }, { "name":"SOIL9_13280 flagellar motor switch protein : Flagellar motor switch protein FliY OS=Lactobacillus mali KCTC 3596 = DSM 20444 GN=fliY PE=4 SV=1: SpoA\tK02417 fliN; flagellar motor switch protein FliN" }, { "name":"SOIL9_13510 flagellar m-ring protein : Flagellar M-ring protein OS=Candidatus Methylomirabilis oxyfera GN=fliF PE=3 SV=1: YscJ_FliF: YscJ_FliF_C\tK02409 fliF; flagellar M-ring protein FliF" }, { "name":"SOIL9_13180 flagellar p-ring protein : Flagellar P-ring protein OS=Desulfohalobium retbaense (strain DSM 5692) GN=flgI PE=3 SV=1: FlgI\tK02394 flgI; flagellar P-ring protein FlgI" }, { "name":"SOIL9_13160 : SAF_2\tK02386 flgA; flagellar basal body P-ring formation protein FlgA" }, { "name":"SOIL9_13170 flagellar l-ring protein : Flagellar L-ring protein FlgH OS=uncultured planctomycete GN=HGMM_F33C03C02 PE=4 SV=1: FlgH\tK02393 flgH; flagellar L-ring protein FlgH" }, { "name":"SOIL9_13260 flagellar basal body-associated protein : Flagellar basal body-associated protein FliL OS=Labrenzia alexandrii DFL-11 GN=fliL PE=4 SV=1: FliL\tK02415 fliL; flagellar protein FliL" }, { "name":"SOIL9_13520 flagellar hook-basal body complex protein : Flagellar hook-basal body complex protein FliE OS=Desulfotomaculum hydrothermale Lam5 = DSM 18033 GN=fliE PE=3 SV=1: FliE\tK02408 fliE; flagellar hook-basal body complex protein FliE" }, { "name":"SOIL9_13540 flagellar basal-body rod protein : Flagellar basal body rod protein FlgB OS=Candidatus Kuenenia stuttgartiensis GN=flgB PE=3 SV=1: Flg_bb_rod\tK02387 flgB; flagellar basal-body rod protein FlgB" }, { "name":"SOIL9_13530 flagellar basal body rod protein : Flagellar basal-body rod protein FlgC OS=Marinitoga piezophila (strain DSM 14283 \/ JCM 11233 \/ KA3) GN=Marpi_1604 PE=4 SV=1: Flg_bb_rod: Flg_bbr_C\tK02388 flgC; flagellar basal-body rod protein FlgC" }, { "name":"SOIL9_13310 Flagellar hook capping protein OS=Bacillus sp. 1NLA3E GN=B1NLA3E_18280 PE=4 SV=1: FlgD\tK02389 flgD; flagellar basal-body rod modification protein FlgD" }, { "name":"SOIL9_13140 Flagellar basal body rod protein FlgG OS=uncultured planctomycete GN=HGMM_F33C03C05 PE=4 SV=1: Flg_bbr_C\tK02391 flgF; flagellar basal-body rod protein FlgF" }, { "name":"SOIL9_13150 flagellar basal body rod protein : Flagellar basal body rod protein FlgG OS=uncultured planctomycete GN=HGMM_F33C03C04 PE=4 SV=1: Flg_bb_rod: Flg_bbr_C\tK02392 flgG; flagellar basal-body rod protein FlgG" }, { "name":"SOIL9_45510 Flagellar basal body rod protein FlgG OS=uncultured planctomycete GN=HGMM_F33C03C04 PE=4 SV=1\tK02392 flgG; flagellar basal-body rod protein FlgG" }, { "name":"SOIL9_47220 flagellar basal body rod protein : Flagellar hook basal-body protein FlgG OS=Aquifex aeolicus (strain VF5) GN=flgG2 PE=4 SV=1: Flg_bb_rod: Flg_bbr_C\tK02392 flgG; flagellar basal-body rod protein FlgG" }, { "name":"SOIL9_58010 Flagellar basal-body rod protein FlgG OS=Novosphingobium pentaromativorans US6-1 GN=flgG PE=4 SV=1\tK02392 flgG; flagellar basal-body rod protein FlgG" }, { "name":"SOIL9_13190 FlgJ family peptidoglycan hydrolase OS=Leclercia adecarboxylata ATCC 23216 = NBRC 102595 GN=flgJ PE=4 SV=1: Rod-binding\tK02395 flgJ; peptidoglycan hydrolase FlgJ" }, { "name":"SOIL9_13300 flagellar hook protein : Flagellar hook-basal body protein OS=Cellulomonas fimi (strain ATCC 484 \/ DSM 20113 \/ JCM 1341 \/ NBRC 15513 \/ NCIMB 8980 \/ NCTC 7547) GN=Celf_0679 PE=4 SV=1: Flg_bb_rod: FlaE: Flg_bbr_C\tK02390 flgE; flagellar hook protein FlgE" }, { "name":"SOIL9_13210 flagellar hook-associated protein : Uncharacterized protein OS=uncultured bacterium GN=ACD_79C00963G0004 PE=4 SV=1: Flg_bb_rod: Flagellin_C\tK02396 flgK; flagellar hook-associated protein 1" }, { "name":"SOIL9_13220 flagellar hook-associated protein : Similar to flagellar hook-associated protein FlgL OS=Candidatus Kuenenia stuttgartiensis GN=flgL PE=4 SV=1: Flagellin_N\tK02397 flgL; flagellar hook-associated protein 3 FlgL" }, { "name":"SOIL9_63630 Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_14991 PE=4 SV=1: CxxCxxCC\tK18475 fliB; lysine-N-methylase [EC:2.1.1.-]" }, { "name":"SOIL9_13110 protein containing flagellin : Flagellar protein OS=Geobacillus sp. A8 GN=GA8_04200 PE=4 SV=1: Flagellin_N: Flagellin_C\tK02406 fliC; flagellin" }, { "name":"SOIL9_13120 flagellar hook protein : Flagellar hook-associated 2 domain protein OS=Methylovorus glucosetrophus (strain SIP3-4) GN=Msip34_0750 PE=4 SV=1: FliD_N: FliD_C\tK02407 fliD; flagellar hook-associated protein 2" }, { "name":"SOIL9_13130 flagellar protein : Flagellar protein FliS OS=Natranaerobius thermophilus (strain ATCC BAA-1301 \/ DSM 18059 \/ JW\/NM-WN-LF) GN=Nther_2228 PE=4 SV=1: FliS\tK02422 fliS; flagellar secretion chaperone FliS" }, { "name":"SOIL9_13380 rna sigma 28 : RNA polymerase sigma factor for flagellar operon FliA OS=uncultured planctomycete GN=HGMM_F11F07C13 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2\tK02405 fliA; RNA polymerase sigma factor FliA" }, { "name":"SOIL9_67350 rna polymerase sigma70 : RNA polymerase sigma factor OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7408 PE=3 SV=1: Sigma70_r2: Sigma70_r3: Sigma70_r4\tK02405 fliA; RNA polymerase sigma factor FliA" }, { "name":"SOIL9_13360 flagellar motor protein : MotA\/TolQ\/ExbB proton channel OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2583 PE=4 SV=1: MotA_ExbB\tK02556 motA; chemotaxis protein MotA" }, { "name":"SOIL9_13350 flagellar motor protein : Motility protein B, N-terminal domain protein OS=Gemmatimonadetes bacterium KBS708 GN=J421_0225 PE=4 SV=1: MotB_plug\tK02557 motB; chemotaxis protein MotB" }, { "name":"SOIL9_66740 unnamed protein product; BLAST_uniprot: no_hits\tK02398 flgM; negative regulator of flagellin synthesis FlgM" }, { "name":"SOIL9_11500 twitching motility protein : Pilus retraction protein PilT OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5249 PE=4 SV=1: T2SE\tK02669 pilT; twitching motility protein PilT" }, { "name":"SOIL9_12630 twitching motility protein : Uncharacterized protein OS=uncultured bacterium GN=ACD_38C00035G0004 PE=4 SV=1: T2SE\tK02669 pilT; twitching motility protein PilT" }, { "name":"SOIL9_65960 twitching motility protein : Twitching motility protein OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_2546 PE=4 SV=1: T2SE\tK02669 pilT; twitching motility protein PilT" }, { "name":"SOIL9_65950 type ii secretion system protein e : Type II secretion system protein E OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0408 PE=4 SV=1: T2SE_Nter: T2SE\tK02652 pilB; type IV pilus assembly protein PilB" }, { "name":"SOIL9_65970 type ii secretion system protein e : Type II secretion system protein E OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0410 PE=4 SV=1: T2SE_Nter: T2SE\tK02652 pilB; type IV pilus assembly protein PilB" }, { "name":"SOIL9_65940 type iv fimbrial assembly protein : Type II secretory pathway, component PulF OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6457 PE=4 SV=1: T2SF: T2SF\tK02653 pilC; type IV pilus assembly protein PilC" }, { "name":"SOIL9_26350 Flp\/Fap pilin component OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0134 PE=4 SV=1: Flp_Fap\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"SOIL9_32450 Flp\/Fap pilin component OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0134 PE=4 SV=1: Flp_Fap\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"SOIL9_32460 Flp\/Fap pilin component OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0134 PE=4 SV=1: Flp_Fap\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"SOIL9_59840 Flp\/Fap pilin component OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0134 PE=4 SV=1: Flp_Fap\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"SOIL9_59850 Flp\/Fap pilin component OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0134 PE=4 SV=1: Flp_Fap\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"SOIL9_59860 peptidase a24a prepilin type iv : Type IV prepilin peptidase CpaA-like protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_06439 PE=4 SV=1: Peptidase_A24\tK02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]" }, { "name":"SOIL9_59880 Flp pilus assembly protein CpaB OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_1524 PE=4 SV=1: SAF_2: SAF\tK02279 cpaB; pilus assembly protein CpaB" }, { "name":"SOIL9_59890 type ii and iii secretion system protein : Type II and III secretion system protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2076 PE=4 SV=1: Secretin\tK02280 cpaC; pilus assembly protein CpaC" }, { "name":"SOIL9_59900 response regulator receiver protein : Response regulator receiver protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2077 PE=4 SV=1: Response_reg: AAA_31\tK02282 cpaE; pilus assembly protein CpaE" }, { "name":"SOIL9_63820 Uncharacterized protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_3714 PE=4 SV=1: AAA_31\tK02282 cpaE; pilus assembly protein CpaE" }, { "name":"SOIL9_59910 type ii secretion system protein e : Type II secretion system protein E OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1434 PE=4 SV=1: T2SE\tK02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]" }, { "name":"SOIL9_63830 type ii secretion system protein e : Type II secretion system protein E OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1434 PE=4 SV=1: T2SE\tK02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]" }, { "name":"SOIL9_77010 Type II\/IV secretion system protein, TadA subfamily protein OS=Rhodopirellula maiorica SM1 GN=RMSM_05347 PE=4 SV=1\tK02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]" } ] }, { "name":"03037 Cilium and associated proteins" }, { "name":"04812 Cytoskeleton proteins [BR:gms04812]", "children":[ { "name":"SOIL9_43550 ParA protein OS=Rhodopirellula europaea 6C GN=RE6C_04424 PE=4 SV=1: CbiA\tK03496 parA; chromosome partitioning protein" }, { "name":"SOIL9_61090 ParA protein OS=Rhodopirellula europaea 6C GN=RE6C_04424 PE=4 SV=1: CbiA\tK03496 parA; chromosome partitioning protein" }, { "name":"SOIL9_63490 Partitioning or sporulation protein ParA OS=uncultured planctomycete GN=HGMM_F01A04C17 PE=4 SV=1: CbiA\tK03496 parA; chromosome partitioning protein" }, { "name":"SOIL9_81300 ParA protein OS=Rhodopirellula europaea 6C GN=RE6C_04424 PE=4 SV=1: CbiA\tK03496 parA; chromosome partitioning protein" }, { "name":"SOIL9_42960 ParBc, ParB-like nuclease domain OS=Blastopirellula marina DSM 3645 GN=DSM3645_27843 PE=4 SV=1: ParBc\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"SOIL9_48260 chromosome partitioning protein : ParBc, ParB-like nuclease domain OS=Blastopirellula marina DSM 3645 GN=DSM3645_27843 PE=4 SV=1: ParBc\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"SOIL9_60400 chromosome partitioning protein : ParBc, ParB-like nuclease domain OS=Symbiobacterium thermophilum (strain T \/ IAM 14863) GN=STH3332 PE=4 SV=1: ParBc\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"SOIL9_69650 parb-like partition protein : ParB-like partition protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1718 PE=4 SV=1: ParBc\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"SOIL9_81950 chromosome partitioning protein : ParB-like partition protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7661 PE=4 SV=1: ParBc\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" } ] }, { "name":"04147 Exosome [BR:gms04147]", "children":[ { "name":"SOIL9_59030 heat shock protein 90 : Chaperone protein HtpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1: HATPase_c_3: HSP90\tK04079 HSP90A; molecular chaperone HtpG" }, { "name":"SOIL9_22170 enolase : Enolase OS=Brevibacillus panacihumi W25 GN=eno PE=3 SV=1: Enolase_N: Enolase_C\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]" }, { "name":"SOIL9_11620 glyceraldehyde-3-phosphate dehydrogenase : Glyceraldehyde-3-phosphate dehydrogenase OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_1890 PE=3 SV=1: Gp_dh_N: Gp_dh_C\tK00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]" }, { "name":"SOIL9_11610 phosphoglycerate kinase : Phosphoglycerate kinase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=pgk PE=3 SV=1: PGK\tK00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]" }, { "name":"SOIL9_58040 pyruvate kinase : Pyruvate kinase OS=Hyalangium minutum GN=DB31_5931 PE=3 SV=1: PK: PK_C\tK00873 PK; pyruvate kinase [EC:2.7.1.40]" }, { "name":"SOIL9_12550 peptidyl-prolyl cis-trans isomerase : Peptidyl-prolyl cis-trans isomerase, cyclophilin type OS=Fimbriimonas ginsengisoli Gsoil 348 GN=OP10G_4301 PE=3 SV=1: Pro_isomerase\tK03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]" }, { "name":"SOIL9_10350 membrane dipeptidase : Membrane dipeptidase OS=Planctomyces maris DSM 8797 GN=PM8797T_23916 PE=4 SV=1: Peptidase_M19\tK01273 DPEP; membrane dipeptidase [EC:3.4.13.19]" }, { "name":"SOIL9_40620 peptidase m19 : Putative peptidase OS=Blastopirellula marina DSM 3645 GN=DSM3645_18586 PE=4 SV=1: Peptidase_M19\tK01273 DPEP; membrane dipeptidase [EC:3.4.13.19]" }, { "name":"SOIL9_73140 Flotillin-like protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_05480 PE=4 SV=1: Band_7\tK07192 FLOT; flotillin" }, { "name":"SOIL9_50210 chaperonin : 60 kDa chaperonin OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=groL PE=3 SV=1: Cpn60_TCP1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SOIL9_50230 chaperonin : 60 kDa chaperonin OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=groL PE=3 SV=1: Cpn60_TCP1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SOIL9_50690 chaperonin : 60 kDa chaperonin OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=groL PE=3 SV=1: Cpn60_TCP1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SOIL9_25310 molecular chaperone : Chaperone protein HscA OS=Terriglobus roseus (strain DSM 18391 \/ NRRL B-41598 \/ KBS 63) GN=Terro_4169 PE=3 SV=1: HSP70: Fe-S_assembly\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SOIL9_54850 Heat shock protein 70 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3585 PE=3 SV=1: HSP70: HSP70\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SOIL9_59680 chaperone protein : Chaperone protein DnaK OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=dnaK PE=2 SV=1: HSP70\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SOIL9_54790 glucose-6-phosphate isomerase : Glucose-6-phosphate isomerase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_3532 PE=3 SV=1: PGI\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]" }, { "name":"SOIL9_63350 glucose-6-phosphate isomerase : Glucose-6-phosphate isomerase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=pgi PE=3 SV=1: PGI\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]" }, { "name":"SOIL9_39700 peptidase s9 : Peptidase S9B dipeptidylpeptidase IV domain protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1654 PE=4 SV=1: Peptidase_M14: DPPIV_N: Peptidase_S9\tK01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]" }, { "name":"SOIL9_47500 peptidase s9 : Peptidase S9B dipeptidylpeptidase IV domain protein OS=Gemmatimonadetes bacterium KBS708 GN=J421_1372 PE=4 SV=1: DPPIV_N: Peptidase_S9\tK01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]" }, { "name":"SOIL9_59980 peptidase s9 : Dipeptidyl aminopeptidase OS=Microscilla marina ATCC 23134 GN=M23134_06058 PE=4 SV=1: DPPIV_N: Peptidase_S9\tK01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]" }, { "name":"SOIL9_73160 dipeptidyl peptidase iv : Gll3871 protein OS=Gloeobacter violaceus (strain PCC 7421) GN=gll3871 PE=4 SV=1: DPPIV_N: Peptidase_S9\tK01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]" }, { "name":"SOIL9_07210 Gluconolactonase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5868 PE=4 SV=1: SGL\tK01053 gnl; gluconolactonase [EC:3.1.1.17]" }, { "name":"SOIL9_42460 Uncharacterized protein OS=Dysgonomonas gadei ATCC BAA-286 GN=HMPREF9455_03868 PE=4 SV=1: SGL\tK01053 gnl; gluconolactonase [EC:3.1.1.17]" }, { "name":"SOIL9_69090 gluconolactonase : Gluconolactonase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2387 PE=4 SV=1: Esterase: SGL\tK01053 gnl; gluconolactonase [EC:3.1.1.17]" }, { "name":"SOIL9_58080 inosine-5 -monophosphate dehydrogenase : Inosine-5'-monophosphate dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=guaB PE=3 SV=1: IMPDH: CBS: CBS\tK00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]" }, { "name":"SOIL9_03630 elongation factor tu : Elongation factor Tu OS=Planctomyces maris DSM 8797 GN=tuf PE=3 SV=1: GTP_EFTU: GTP_EFTU_D2: GTP_EFTU_D3\tK02358 tuf; elongation factor Tu" }, { "name":"SOIL9_11170 elongation factor tu : Elongation factor Tu OS=Rhodopirellula maiorica SM1 GN=tuf PE=3 SV=1: GTP_EFTU: GTP_EFTU_D2: GTP_EFTU_D3\tK02358 tuf; elongation factor Tu" }, { "name":"SOIL9_82280 zinc-binding protein : Histidine triad nucleotide-binding protein 1 OS=Pseudomonas sp. P482 GN=BV82_1936 PE=4 SV=1: HIT\tK02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]" }, { "name":"SOIL9_08790 l-lactate dehydrogenase : L-lactate dehydrogenase OS=Caldilinea aerophila (strain DSM 14535 \/ JCM 11387 \/ NBRC 104270 \/ STL-6-O1) GN=ldh PE=3 SV=1: Ldh_1_N: Ldh_1_C\tK00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]" }, { "name":"SOIL9_31830 Bile acid:sodium symporter OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD2538 PE=4 SV=1: DUF4137\tK14347 SLC10A7; solute carrier family 10 (sodium\/bile acid cotransporter), member 7" }, { "name":"SOIL9_59250 selenium-binding protein : Selenium-binding protein OS=Chroococcidiopsis thermalis PCC 7203 GN=Chro_2931 PE=4 SV=1: SBP56\tK17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4]" }, { "name":"SOIL9_50660 acetyl-acetyltransferase : Acetyl-CoA acetyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6120 PE=3 SV=1: Thiolase_N: Thiolase_C\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SOIL9_09640 peptidase m3a and m3b thimet oligopeptidase f : Oligoendopeptidase F OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2369 PE=3 SV=1: Peptidase_M3: Peptidase_M3\tK01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]" }, { "name":"SOIL9_34650 s-adenosyl-l-homocysteine hydrolase : Adenosylhomocysteinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=ahcY PE=3 SV=1: AdoHcyase: AdoHcyase_NAD\tK01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]" }, { "name":"SOIL9_84780 adenylate kinase : Adenylate kinase OS=Streptomyces hygroscopicus subsp. jinggangensis (strain 5008) GN=adk PE=3 SV=1: ADK: ADK_lid\tK00939 adk; adenylate kinase [EC:2.7.4.3]" }, { "name":"SOIL9_69450 adenine phosphoribosyltransferase : Adenine phosphoribosyltransferase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=apt PE=3 SV=1: Pribosyltran\tK00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]" }, { "name":"SOIL9_06360 argininosuccinate lyase : Argininosuccinate lyase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=argH PE=3 SV=1: Lyase_1: ASL_C2\tK01755 argH; argininosuccinate lyase [EC:4.3.2.1]" }, { "name":"SOIL9_53430 argininosuccinate synthase : Argininosuccinate synthase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2909 PE=4 SV=1: Arginosuc_synth\tK01940 argG; argininosuccinate synthase [EC:6.3.4.5]" }, { "name":"SOIL9_56280 cystathionine beta-lyase : Cystathionine beta-lyase\/cystathionine gamma-synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7194 PE=3 SV=1: Cys_Met_Meta_PP\tK01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]" }, { "name":"SOIL9_38750 amino acid decarboxylase : Aromatic-L-amino-acid decarboxylase OS=Solibacter usitatus (strain Ellin6076) GN=Acid_1182 PE=3 SV=1: Pyridoxal_deC\tK01593 DDC; aromatic-L-amino-acid\/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]" }, { "name":"SOIL9_06670 glycogen branching protein : 1,4-alpha-glucan branching enzyme GlgB OS=Nitrolancea hollandica Lb GN=glgB PE=3 SV=1: CBM_48: Alpha-amylase: Alpha-amylase: Alpha-amylase_C\tK00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]" }, { "name":"SOIL9_17350 -alpha-glucan branching protein : 1,4-alpha-glucan branching enzyme OS=Candidatus Competibacter denitrificans Run_A_D11 GN=BN873_630010 PE=4 SV=1: CBM_48: Alpha-amylase: Alpha-amylase: Alpha-amylase_C\tK00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]" }, { "name":"SOIL9_33870 -alpha-glucan branching protein : 1,4-alpha-glucan branching enzyme OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7136 PE=4 SV=1: CBM_48: Alpha-amylase: Alpha-amylase_C\tK00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]" }, { "name":"SOIL9_82610 glycerol kinase : Glycerol kinase OS=Thermobacillus composti (strain DSM 18247 \/ JCM 13945 \/ KWC4) GN=glpK PE=3 SV=1: FGGY_N: FGGY_C\tK00864 glpK; glycerol kinase [EC:2.7.1.30]" }, { "name":"SOIL9_63500 glutamine synthetase : Glutamine synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4895 PE=3 SV=1: GSIII_N: Gln-synt_C\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"SOIL9_75110 glutamine synthetase : Glutamine synthetase OS=Blastopirellula marina DSM 3645 GN=DSM3645_13233 PE=3 SV=1: Gln-synt_N: Gln-synt_C\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"SOIL9_11820 delta-aminolevulinic acid dehydratase : Delta-aminolevulinic acid dehydratase OS=uncultured planctomycete GN=HGMM_F13D05C09 PE=3 SV=1: ALAD\tK01698 hemB; porphobilinogen synthase [EC:4.2.1.24]" }, { "name":"SOIL9_61740 4-hydroxyphenylpyruvate dioxygenase : 4-hydroxyphenylpyruvate dioxygenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1068 PE=3 SV=1: Glyoxalase: Glyoxalase\tK00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]" }, { "name":"SOIL9_76370 pterin-4-alpha-carbinolamine dehydratase : 4a-hydroxytetrahydrobiopterin dehydratase OS=Rhodopirellula maiorica SM1 GN=RMSM_03401 PE=4 SV=1: Pterin_4a\tK01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]" }, { "name":"SOIL9_03290 d-3-phosphoglycerate dehydrogenase : D-3-phosphoglycerate dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6245 PE=3 SV=1: 2-Hacid_dh: 2-Hacid_dh_C\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"SOIL9_06550 phosphoglycerate dehydrogenase : Lactate dehydrogenase-like oxidoreductase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3563 PE=3 SV=1: 2-Hacid_dh: 2-Hacid_dh_C\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"SOIL9_54710 purine biosynthesis protein purh : Bifunctional purine biosynthesis protein PurH OS=Desulfotomaculum ruminis (strain ATCC 23193 \/ DSM 2154 \/ NCIB 8452 \/ DL) GN=purH PE=3 SV=1: MGS: AICARFT_IMPCHas\tK00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase \/ IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]" }, { "name":"SOIL9_75310 peptidase m48 ste24p : Tetratricopeptide repeat domain protein OS=uncultured planctomycete GN=HGMM_F01A04C25 PE=4 SV=1: Peptidase_M48\tK06013 STE24; STE24 endopeptidase [EC:3.4.24.84]" }, { "name":"SOIL9_55200 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4534 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_74420 dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6538 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SOIL9_23100 glutamate dehydrogenase : Glutamate dehydrogenase OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD2095 PE=3 SV=1: ELFV_dehydrog_N: ELFV_dehydrog\tK00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]" }, { "name":"SOIL9_08930 glucose-6-phosphate 1-dehydrogenase : Glucose-6-phosphate 1-dehydrogenase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=zwf PE=3 SV=1: G6PD_N: G6PD_C\tK00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]" }, { "name":"SOIL9_23700 glucose-6-phosphate 1-dehydrogenase : Glucose-6-phosphate 1-dehydrogenase OS=uncultured bacterium GN=zwf PE=3 SV=1: G6PD_N: G6PD_C\tK00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]" }, { "name":"SOIL9_59720 triosephosphate isomerase : Triosephosphate isomerase OS=Pelotomaculum thermopropionicum (strain DSM 13744 \/ JCM 10971 \/ SI) GN=TpiA PE=3 SV=1: TIM\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]" } ] }, { "name":"02048 Prokaryotic defense system [BR:gms02048]", "children":[ { "name":"SOIL9_41170 CRISPR-associated endonuclease Cas1 OS=Hydrocarboniphaga effusa AP103 GN=cas1 PE=3 SV=1: Cas_Cas4: Cas_Cas1\tK15342 cas1; CRISP-associated protein Cas1" }, { "name":"SOIL9_41160 crispr-associated protein cas2 : CRISPR-associated endoribonuclease Cas2 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=cas2 PE=3 SV=1: CRISPR_Cas2\tK09951 cas2; CRISPR-associated protein Cas2" }, { "name":"SOIL9_41150 crispr-associated helicase cas3 : CRISPR-associated helicase Cas3 OS=Geobacter sulfurreducens (strain ATCC 51573 \/ DSM 12127 \/ PCA) GN=cas3-1 PE=4 SV=1: ResIII: Helicase_C\tK07012 cas3; CRISPR-associated endonuclease\/helicase Cas3 [EC:3.1.-.- 5.6.2.4]" }, { "name":"SOIL9_78820 CRISPR-associated helicase Cas3, subtype Dpsyc OS=Thioflavicoccus mobilis 8321 GN=Thimo_1278 PE=4 SV=1\tK07012 cas3; CRISPR-associated endonuclease\/helicase Cas3 [EC:3.1.-.- 5.6.2.4]" }, { "name":"SOIL9_41130 CRISPR-associated protein, GSU0053 family OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3149 PE=4 SV=1: Cas_GSU0053\tK19131 csb1; CRISPR-associated protein Csb1" }, { "name":"SOIL9_78800 CRISPR-associated protein GSU0053 OS=Haliangium ochraceum (strain DSM 14365 \/ JCM 11303 \/ SMP-2) GN=Hoch_4848 PE=4 SV=1: Cas_GSU0053\tK19131 csb1; CRISPR-associated protein Csb1" }, { "name":"SOIL9_41120 CRISPR-associated protein Csb2 OS=Geobacter sulfurreducens (strain ATCC 51573 \/ DSM 12127 \/ PCA) GN=csb2 PE=4 SV=1: Cas_GSU0054\tK19132 csb2; CRISPR-associated protein Csb2" }, { "name":"SOIL9_78810 Uncharacterized protein OS=Haliangium ochraceum (strain DSM 14365 \/ JCM 11303 \/ SMP-2) GN=Hoch_4849 PE=4 SV=1: Cas_GSU0054\tK19132 csb2; CRISPR-associated protein Csb2" }, { "name":"SOIL9_41140 Uncharacterized protein OS=Rhodovulum sp. PH10 GN=A33M_3013 PE=4 SV=1\tK19135 csx14; CRISPR-associated protein Csx14" }, { "name":"SOIL9_19210 Uncharacterized protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2539 PE=4 SV=1\tK19136 csx17; CRISPR-associated protein Csx17" }, { "name":"SOIL9_49530 dead deah box helicase : EcoEI R domain protein OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 \/ Py2) GN=Xaut_0785 PE=4 SV=1: ResIII: Helicase_C: EcoEI_R_C\tK01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]" }, { "name":"SOIL9_49550 restriction endonuclease s subunits : Restriction endonuclease S subunits-like protein OS=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 GN=RBXJA2T_02302 PE=4 SV=1: Methylase_S\tK01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]" }, { "name":"SOIL9_49540 sam-dependent methyltransferase : N-6 DNA methylase OS=Nitrobacter winogradskyi (strain Nb-255 \/ ATCC 25391) GN=Nwi_0269 PE=4 SV=1: HsdM_N: N6_Mtase\tK03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]" }, { "name":"SOIL9_78900 dna methyltransferase : Adenine-specific DNA-methyltransferase OS=Alcanivorax pacificus W11-5 GN=S7S_02498 PE=4 SV=1: N6_Mtase\tK03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]" }, { "name":"SOIL9_25770 d12 class n6 adenine-specific dna methyltransferase : D12 class N6 adenine-specific DNA methyltransferase OS=Rhodopirellula sallentina SM41 GN=RSSM_03350 PE=4 SV=1: MethyltransfD12\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]" }, { "name":"SOIL9_25780 d12 class n6 adenine-specific dna methyltransferase : D12 class N6 adenine-specific DNA methyltransferase OS=Rhodopirellula sallentina SM41 GN=RSSM_03350 PE=4 SV=1: MethyltransfD12\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]" }, { "name":"SOIL9_78330 d12 class n6 adenine-specific dna methyltransferase : D12 class N6 adenine-specific DNA methyltransferase OS=Rhodopirellula sallentina SM41 GN=RSSM_03350 PE=4 SV=1: MethyltransfD12: MethyltransfD12\tK06223 dam; DNA adenine methylase [EC:2.1.1.72]" }, { "name":"SOIL9_26600 adenine-specific methyltransferase : DNA methylase N-4\/N-6 domain protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_0519 PE=4 SV=1: N6_N4_Mtase\tK07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]" }, { "name":"SOIL9_16960 dna methylase family protein : Uncharacterized protein OS=Hylemonella gracilis str. Niagara R GN=AZ34_10380 PE=4 SV=1: N6_N4_Mtase: N6_N4_Mtase\tK00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]" }, { "name":"SOIL9_78210 adenine dna methyltransferase : DNA methylase domain protein OS=Bordetella bronchiseptica E010 GN=AZ23_1740 PE=4 SV=1: N6_N4_Mtase\tK00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]" }, { "name":"SOIL9_24840 HNH endonuclease OS=Desulfarculus baarsii (strain ATCC 33931 \/ DSM 2075 \/ VKM B-1802 \/ 2st14) GN=Deba_2594 PE=4 SV=1\tK07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]" }, { "name":"SOIL9_27890 gtpase subunit of restriction endonuclease : ATPase associated with various cellular activities AAA_5 OS=Natranaerobius thermophilus (strain ATCC BAA-1301 \/ DSM 18059 \/ JW\/NM-WN-LF) GN=Nther_0805 PE=4 SV=1: DUF2461: AAA_5\tK07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]" }, { "name":"SOIL9_27910 Putative McrC protein OS=Mobilicoccus pelagius NBRC 104925 GN=MOPEL_003_00020 PE=4 SV=1: McrBC\tK19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC" }, { "name":"SOIL9_77810 family transcriptional regulator : mRNA interferase OS=Stigmatella aurantiaca (strain DW4\/3-1) GN=STIAU_1234 PE=3 SV=1: PemK\tK07171 mazF; mRNA interferase MazF [EC:3.1.-.-]" }, { "name":"SOIL9_72630 plasmid maintenance protein : Ribonuclease VapC OS=uncultured bacterium GN=vapC PE=3 SV=1: PIN\tK18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]" }, { "name":"SOIL9_43540 Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7677 PE=4 SV=1: PIN\tK19686 vapC28S; ribonuclease VapC28\/30\/34\/36\/42 [EC:3.1.-.-]" }, { "name":"SOIL9_60420 Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7677 PE=4 SV=1: PIN\tK19686 vapC28S; ribonuclease VapC28\/30\/34\/36\/42 [EC:3.1.-.-]" }, { "name":"SOIL9_05650 glutamyl-q trna ligase : Glutamyl-or glutaminyl-tRNA synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1159 PE=3 SV=1: tRNA-synt_1c\tK01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]" }, { "name":"SOIL9_43090 unnamed protein product; BLAST_uniprot: no_hits\tK19168 cptA; toxin CptA" }, { "name":"SOIL9_00460 cysteine desulfurase : Cysteine desulfurase family protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0245 PE=4 SV=1: Aminotran_5: Aminotran_5\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]" }, { "name":"SOIL9_25240 cysteine desulfurase : Cysteine desulfurase IscS OS=Acidobacterium capsulatum (strain ATCC 51196 \/ DSM 11244 \/ JCM 7670) GN=icsS2 PE=3 SV=1: Aminotran_5\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]" }, { "name":"SOIL9_35690 2 3 -cyclic nucleotide 2 -phosphodiesterase : 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase OS=Mesorhizobium amorphae CCNWGS0123 GN=MEA186_24967 PE=4 SV=1\tK19170 dndC; DNA sulfur modification protein DndC" } ] }, { "name":"04030 G protein-coupled receptors" }, { "name":"04050 Cytokine receptors" }, { "name":"04054 Pattern recognition receptors" }, { "name":"03310 Nuclear receptors" }, { "name":"04040 Ion channels" }, { "name":"04031 GTP-binding proteins" }, { "name":"04052 Cytokines and neuropeptides" }, { "name":"04515 Cell adhesion molecules" }, { "name":"04090 CD molecules [BR:gms04090]", "children":[ { "name":"SOIL9_39700 peptidase s9 : Peptidase S9B dipeptidylpeptidase IV domain protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1654 PE=4 SV=1: Peptidase_M14: DPPIV_N: Peptidase_S9\tK01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]" }, { "name":"SOIL9_47500 peptidase s9 : Peptidase S9B dipeptidylpeptidase IV domain protein OS=Gemmatimonadetes bacterium KBS708 GN=J421_1372 PE=4 SV=1: DPPIV_N: Peptidase_S9\tK01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]" }, { "name":"SOIL9_59980 peptidase s9 : Dipeptidyl aminopeptidase OS=Microscilla marina ATCC 23134 GN=M23134_06058 PE=4 SV=1: DPPIV_N: Peptidase_S9\tK01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]" }, { "name":"SOIL9_73160 dipeptidyl peptidase iv : Gll3871 protein OS=Gloeobacter violaceus (strain PCC 7421) GN=gll3871 PE=4 SV=1: DPPIV_N: Peptidase_S9\tK01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]" }, { "name":"SOIL9_09640 peptidase m3a and m3b thimet oligopeptidase f : Oligoendopeptidase F OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2369 PE=3 SV=1: Peptidase_M3: Peptidase_M3\tK01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]" } ] }, { "name":"01504 Antimicrobial resistance genes [BR:gms01504]", "children":[ { "name":"SOIL9_06060 aminoglycoside acetyltransferase : Sortase-like acyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6048 PE=4 SV=1: Acetyltransf_1: ACT_7\tK18816 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82]" }, { "name":"SOIL9_70580 unnamed protein product; BLAST_uniprot: no_hits\tK00663 aacA; aminoglycoside 6'-N-acetyltransferase [EC:2.3.1.82]" }, { "name":"SOIL9_01930 Virginiamycin B lyase OS=Streptococcus gallolyticus GN=vgb PE=3 SV=1\tK18235 vgb; virginiamycin B lyase [EC:4.2.99.-]" }, { "name":"SOIL9_15440 transcriptional regulator : Putative transcriptional regulator OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1395 PE=4 SV=1: Penicillinase_R\tK02171 blaI; BlaI family transcriptional regulator, penicillinase repressor" }, { "name":"SOIL9_35030 penicillinase repressor : Probable Penicillinase repressor OS=Planctomyces maris DSM 8797 GN=PM8797T_09109 PE=4 SV=1: Penicillinase_R\tK02171 blaI; BlaI family transcriptional regulator, penicillinase repressor" }, { "name":"SOIL9_41640 transcriptional regulator : Transcriptional repressor, CopY family OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_3893 PE=4 SV=1: Penicillinase_R\tK02171 blaI; BlaI family transcriptional regulator, penicillinase repressor" }, { "name":"SOIL9_73910 family transcriptional regulator : Transcriptional repressor CopY OS=Sorangium cellulosum (strain So ce56) GN=sce6610 PE=4 SV=1: Penicillinase_R: DDE_Tnp_IS1595\tK02171 blaI; BlaI family transcriptional regulator, penicillinase repressor" }, { "name":"SOIL9_78390 histidine kinase : Histidine kinase OS=Hyphomicrobium denitrificans 1NES1 GN=HYPDE_40403 PE=4 SV=1: 2CSK_N: HAMP: HisKA: HATPase_c\tK07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]" }, { "name":"SOIL9_24510 transcriptional regulator : Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0888 PE=4 SV=1: Response_reg: Trans_reg_C\tK07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR" }, { "name":"SOIL9_78400 transcriptional regulator : DNA-binding heavy metal response regulator (Fragment) OS=mine drainage metagenome GN=B2A_07583 PE=4 SV=1: Response_reg: Trans_reg_C\tK07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR" }, { "name":"SOIL9_09490 Endonuclease\/exonuclease\/phosphatase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_3201 PE=4 SV=1: Exo_endo_phos\tK18353 vanJ; vancomycin resistance protein VanJ" }, { "name":"SOIL9_18810 rnd family efflux transporter mfp subunit : RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0100 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_23810 rnd family efflux transporter mfp subunit : Efflux transporter, RND family, MFP subunit OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1220 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_26910 rnd transporter mfp subunit : Efflux transporter, RND family, MFP subunit OS=Burkholderia sp. (strain CCGE1002) GN=BC1002_5413 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_66350 rnd family efflux transporter mfp subunit : RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1026 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_74170 hemolysin d : Putative Co\/Zn\/Cd efflux system membrane fusion protein OS=Sandaracinus amylolyticus GN=DB32_2325 PE=4 SV=1: HlyD_2\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_11990 hydrophobe amphiphile efflux-1 family : Transporter, hydrophobe\/amphiphile efflux-1 (HAE1) family OS=Rhodopirellula maiorica SM1 GN=RMSM_07794 PE=4 SV=1: ACR_tran: ACR_tran: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_18820 acriflavin resistance protein : Cation\/multidrug efflux pump OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2114 PE=4 SV=1: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_23820 acriflavin resistance protein : Acriflavin resistance protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1221 PE=4 SV=1: ACR_tran: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_26920 rnd transporter : Acriflavin resistance protein OS=Gloeobacter kilaueensis JS1 GN=GKIL_3115 PE=4 SV=1: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_66360 rnd transporter : Acriflavin resistance protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0559 PE=4 SV=1: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_74160 multidrug transporter : RND efflux system, inner membrane transporter CmeB OS=Sandaracinus amylolyticus GN=DB32_2324 PE=4 SV=1: ACR_tran: ACR_tran\tK18138 acrB; multidrug efflux pump" }, { "name":"SOIL9_74150 membrane protein : Outer membrane protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6898 PE=4 SV=1: OEP: OEP\tK18139 oprM; outer membrane protein, multidrug efflux system" }, { "name":"SOIL9_08680 rnd family efflux transporter mfp subunit : RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3860 PE=4 SV=1: HlyD\tK18298 mexE; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_35120 rnd transporter : RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7473 PE=4 SV=1: HlyD\tK18298 mexE; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_47580 rnd transporter mfp subunit : RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7473 PE=4 SV=1: HlyD\tK18298 mexE; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_54900 rnd family efflux transporter mfp subunit : Efflux transporter, RND family, MFP subunit OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2293 PE=4 SV=1: HlyD\tK18298 mexE; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_75260 rnd family efflux transporter mfp subunit : RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6016 PE=4 SV=1: HlyD\tK18298 mexE; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_01700 transporter : Efflux pump membrane transporter BepE OS=Methyloglobulus morosus KoM1 GN=bepE PE=4 SV=1: ACR_tran\tK18299 mexF; multidrug efflux pump" }, { "name":"SOIL9_08670 rnd transporter : Transporter, hydrophobe\/amphiphile efflux-1 (HAE1) family OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2288 PE=4 SV=1: ACR_tran\tK18299 mexF; multidrug efflux pump" }, { "name":"SOIL9_35100 transporter : Cation\/multidrug efflux pump OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7475 PE=4 SV=1: ACR_tran: ACR_tran\tK18299 mexF; multidrug efflux pump" }, { "name":"SOIL9_35110 rnd transporter : Cation\/multidrug efflux pump OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7474 PE=4 SV=1: ACR_tran: ACR_tran\tK18299 mexF; multidrug efflux pump" }, { "name":"SOIL9_47560 transporter : Cation\/multidrug efflux pump OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3859 PE=4 SV=1: ACR_tran: ACR_tran: ACR_tran\tK18299 mexF; multidrug efflux pump" }, { "name":"SOIL9_47570 transporter : Cation\/multidrug efflux pump OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7474 PE=4 SV=1: ACR_tran: ACR_tran\tK18299 mexF; multidrug efflux pump" }, { "name":"SOIL9_54910 rnd transporter : Transporter, hydrophobe\/amphiphile efflux-1 (HAE1) family OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2294 PE=4 SV=1: ACR_tran\tK18299 mexF; multidrug efflux pump" }, { "name":"SOIL9_54920 cation multidrug efflux pump : Transporter, hydrophobe\/amphiphile efflux-1 (HAE1) family OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2295 PE=4 SV=1: ACR_tran: ACR_tran\tK18299 mexF; multidrug efflux pump" }, { "name":"SOIL9_75270 rnd transporter : Transporter, hydrophobe\/amphiphile efflux-1 (HAE1) family OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2294 PE=4 SV=1: ACR_tran: ACR_tran\tK18299 mexF; multidrug efflux pump" }, { "name":"SOIL9_75280 cation multidrug efflux pump : Transporter, hydrophobe\/amphiphile efflux-1 (HAE1) family OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2295 PE=4 SV=1: ACR_tran: ACR_tran\tK18299 mexF; multidrug efflux pump" }, { "name":"SOIL9_04230 multidrug transporter : Putative Co\/Zn\/Cd efflux system membrane fusion protein OS=Rhodovulum sp. PH10 GN=A33M_4130 PE=4 SV=1: HlyD_2\tK18302 mexJ; membrane fusion protein, multidrug efflux system" }, { "name":"SOIL9_04240 acriflavin resistance protein : Efflux system protein OS=Nitratireductor pacificus pht-3B GN=NA2_12493 PE=4 SV=1: ACR_tran\tK18303 mexK; multidrug efflux pump" }, { "name":"SOIL9_06580 family transcriptional regulator : MerR family transcriptional regulator OS=Candidatus Entotheonella sp. TSY2 GN=ETSY2_48225 PE=4 SV=1: MerR: MerR-DNA-bind\tK19591 cueR; MerR family transcriptional regulator, copper efflux regulator" }, { "name":"SOIL9_07680 outer membrane efflux protein : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_09634 PE=4 SV=1: OEP\tK12340 tolC; outer membrane protein" } ] }, { "name":"00535 Proteoglycans" }, { "name":"00536 Glycosaminoglycan binding proteins" }, { "name":"00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:gms00537]", "children":[ { "name":"SOIL9_82340 trehalase : Alpha,alpha-trehalase OS=Herpetosiphon aurantiacus (strain ATCC 23779 \/ DSM 785) GN=Haur_2832 PE=4 SV=1: Trehalase: Trehalase\tK01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]" }, { "name":"SOIL9_10350 membrane dipeptidase : Membrane dipeptidase OS=Planctomyces maris DSM 8797 GN=PM8797T_23916 PE=4 SV=1: Peptidase_M19\tK01273 DPEP; membrane dipeptidase [EC:3.4.13.19]" }, { "name":"SOIL9_40620 peptidase m19 : Putative peptidase OS=Blastopirellula marina DSM 3645 GN=DSM3645_18586 PE=4 SV=1: Peptidase_M19\tK01273 DPEP; membrane dipeptidase [EC:3.4.13.19]" } ] }, { "name":"04091 Lectins" }, { "name":"04990 Domain-containing proteins not elsewhere classified" } ] }, { "name":"09185 Viral protein families", "children":[ { "name":"03200 Viral proteins" }, { "name":"03210 Viral fusion proteins" } ] }, { "name":"09184 RNA family", "children":[ { "name":"03100 Non-coding RNAs [BR:gms03100]", "children":[ { "name":"SOIL9__T250 score=79.65; score=79.65\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"SOIL9__T40 score=87.04; score=87.04\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"SOIL9__T460 score=83.68; score=83.68\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"SOIL9__T110 score=70.30; score=70.30\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SOIL9__T150 score=67.05; score=67.05\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SOIL9__T160 score=73.40; score=73.40\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SOIL9__T230 score=76.39; score=76.39\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SOIL9__T390 score=46.59; score=46.59\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SOIL9__T450 score=40.33; score=40.33\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SOIL9__T470 score=81.80; score=81.80\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SOIL9__T50 score=65.06; score=65.06\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SOIL9__T650 score=73.66; score=73.66\tK14220 tRNA-Asn; tRNA Asn" }, { "name":"SOIL9__T660 score=58.50; score=58.50\tK14220 tRNA-Asn; tRNA Asn" }, { "name":"SOIL9__T430 score=82.68; score=82.68\tK14221 tRNA-Asp; tRNA Asp" }, { "name":"SOIL9__T190 score=53.53; score=53.53\tK14223 tRNA-Gln; tRNA Gln" }, { "name":"SOIL9__T630 score=56.95; score=56.95\tK14223 tRNA-Gln; tRNA Gln" }, { "name":"SOIL9__T350 score=57.16; score=57.16\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"SOIL9__T500 score=56.01; score=56.01\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"SOIL9__T590 score=51.78; score=51.78\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"SOIL9__T310 score=45.19; score=45.19\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SOIL9__T540 score=77.25; score=77.25\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SOIL9__T680 score=47.76; score=47.76\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SOIL9__T530 score=80.21; score=80.21\tK14226 tRNA-His; tRNA His" }, { "name":"SOIL9__T30 score=80.27; score=80.27\tK14227 tRNA-Ile; tRNA Ile" }, { "name":"SOIL9__T130 score=66.05; score=66.05\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SOIL9__T330 score=37.33; score=37.33\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SOIL9__T360 score=48.51; score=48.51\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SOIL9__T370 score=43.33; score=43.33\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SOIL9__T510 score=66.02; score=66.02\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SOIL9__T620 score=67.36; score=67.36\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SOIL9__T210 score=84.77; score=84.77\tK14229 tRNA-Lys; tRNA Lys" }, { "name":"SOIL9__T420 score=90.89; score=90.89\tK14229 tRNA-Lys; tRNA Lys" }, { "name":"SOIL9__T20 score=81.52; score=81.52\tK14230 tRNA-Met; tRNA Met" }, { "name":"SOIL9__T270 score=41.76; score=41.76\tK14230 tRNA-Met; tRNA Met" }, { "name":"SOIL9__T520 score=75.88; score=75.88\tK14230 tRNA-Met; tRNA Met" }, { "name":"SOIL9__T560 score=44.67; score=44.67\tK14230 tRNA-Met; tRNA Met" }, { "name":"SOIL9__T640 score=44.67; score=44.67\tK14230 tRNA-Met; tRNA Met" }, { "name":"SOIL9__T720 score=41.99; score=41.99\tK14230 tRNA-Met; tRNA Met" }, { "name":"SOIL9__T140 score=80.81; score=80.81\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"SOIL9__T240 score=79.99; score=79.99\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"SOIL9__T550 score=83.14; score=83.14\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"SOIL9__T700 score=49.30; score=49.30\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"SOIL9__T220 score=73.94; score=73.94\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"SOIL9__T260 score=59.92; score=59.92\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"SOIL9__T290 score=58.56; score=58.56\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"SOIL9__T610 score=66.56; score=66.56\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"SOIL9__T580 score=77.70; score=77.70\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"SOIL9__T60 score=75.23; score=75.23\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"SOIL9__T90 score=89.18; score=89.18\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"SOIL9__T100 score=73.68; score=73.68\tK14235 tRNA-Trp; tRNA Trp" }, { "name":"SOIL9__T170 score=84.09; score=84.09\tK14237 tRNA-Val; tRNA Val" }, { "name":"SOIL9__T180 score=69.11; score=69.11\tK14237 tRNA-Val; tRNA Val" }, { "name":"SOIL9__T200 score=82.20; score=82.20\tK14237 tRNA-Val; tRNA Val" }, { "name":"SOIL9__T400 score=56.36; score=56.36\tK14237 tRNA-Val; tRNA Val" }, { "name":"SOIL9__T490 score=49.61; score=49.61\tK14237 tRNA-Val; tRNA Val" }, { "name":"SOIL9__R70 score=1415.6; score=1415.6; frame=.\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SOIL9__R80 score=1415.6; score=1415.6; frame=.\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SOIL9__R90 score=1415.6; score=1415.6; frame=.\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SOIL9__R40 score=2588.1; score=2588.1; frame=.\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SOIL9__R50 score=2588.1; score=2588.1; frame=.\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SOIL9__R60 score=2588.1; score=2588.1; frame=.\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SOIL9__R10 score=75.6; score=75.6; frame=.\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SOIL9__R20 score=75.6; score=75.6; frame=.\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SOIL9__R30 score=75.6; score=75.6; frame=.\tK01985 5SrRNA; 5S ribosomal RNA" } ] } ] } ] }, { "name":"09190 Not Included in Pathway or Brite", "children":[ { "name":"09191 Unclassified: metabolism", "children":[ { "name":"99980 Enzymes with EC numbers", "children":[ { "name":"SOIL9_84930 3-beta hydroxysteroid dehydrogenase : 3-beta-hydroxysteroid dehydrogenase\/isomerase family protein OS=Geobacter bemidjiensis (strain Bem \/ ATCC BAA-1014 \/ DSM 16622) GN=Gbem_2099 PE=4 SV=1: 3Beta_HSD\tK22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412]" }, { "name":"SOIL9_33240 acetoin dehydrogenase : Pyruvate\/2-oxoglutarate dehydrogenase complex,dehydrogenase (E1) component, eukaryotic type, beta subunit OS=Chthonomonas calidirosea (strain DSM 23976 \/ ICMP 18418 \/ T49) GN=CCALI_02126 PE=4 SV=1: Transket_pyr: Transketolase_C\tK21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]" }, { "name":"SOIL9_38350 acetoin dehydrogenase : Acetoin dehydrogenase E1 component beta-subunit OS=Crocosphaera watsonii WH 0401 GN=CWATWH0401_2619 PE=4 SV=1: Transket_pyr: Transketolase_C\tK21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]" }, { "name":"SOIL9_41690 aldo keto reductase : Aldo\/keto reductase OS=Solibacter usitatus (strain Ellin6076) GN=Acid_1998 PE=4 SV=1: Aldo_ket_red\tK23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]" }, { "name":"SOIL9_10340 copper homeostasis protein : Copper homeostasis protein CutC OS=Treponema medium ATCC 700293 GN=HMPREF9195_02012 PE=4 SV=1: NAD_binding_8: CutC\tK18208 RNLS; renalase [EC:1.6.3.5]" }, { "name":"SOIL9_31870 quinone oxidoreductase : Alcohol dehydrogenase zinc-binding domain protein OS=Anaeromyxobacter sp. (strain Fw109-5) GN=Anae109_2985 PE=4 SV=1: ADH_N: ADH_zinc_N\tK00344 qor; NADPH:quinone reductase [EC:1.6.5.5]" }, { "name":"SOIL9_14080 peptide methionine sulfoxide reductase : Peptide methionine sulfoxide reductase MsrA OS=Sporocytophaga myxococcoides GN=msrA PE=3 SV=1: PMSR\tK07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]" }, { "name":"SOIL9_12500 methionine sulfoxide reductase b : Peptide methionine sulfoxide reductase MsrB OS=Nitratireductor basaltis GN=msrB PE=3 SV=1: SelR\tK07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]" }, { "name":"SOIL9_67310 methionine sulfoxide reductase b : Peptide methionine sulfoxide reductase MsrB OS=Alcanivorax sp. P2S70 GN=msrB PE=3 SV=1: SelR\tK07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]" }, { "name":"SOIL9_37820 cytochrome c peroxidase : Di-haem cytochrome c peroxidase family protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_07016 PE=4 SV=1: CCP_MauG\tK00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]" }, { "name":"SOIL9_39140 cytochrome c peroxidase : Cytochrome c peroxidase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4048 PE=4 SV=1: CCP_MauG: Cytochrom_C\tK00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]" }, { "name":"SOIL9_63450 cytochrome c peroxidase : Cytochrome c peroxidase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5068 PE=4 SV=1: CCP_MauG\tK00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]" }, { "name":"SOIL9_61300 haloperoxidase : Alpha\/beta hydrolase fold OS=Parvibaculum lavamentivorans (strain DS-1 \/ DSM 13023 \/ NCIMB 13966) GN=Plav_2363 PE=4 SV=1: Abhydrolase_6\tK00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]" }, { "name":"SOIL9_47970 alkyl hydroperoxide reductase thiol specific antioxidant mal allergen : Alkyl hydroperoxide reductase\/Thiol specific antioxidant\/Mal allergen OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3118 PE=4 SV=1: AhpC-TSA\tK03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]" }, { "name":"SOIL9_69180 peroxiredoxin : Uncharacterized protein OS=Thermoactinomyces sp. Gus2-1 GN=JS81_09670 PE=4 SV=1: AhpC-TSA\tK03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]" }, { "name":"SOIL9_19940 lipid hydroperoxide peroxidase : Probable thiol peroxidase OS=Lysinibacillus sp. BF-4 GN=tpx PE=3 SV=1: Redoxin\tK11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]" }, { "name":"SOIL9_38200 peroxiredoxin : Peroxiredoxin, Ohr subfamily OS=Caulobacter sp. AP07 GN=PMI01_00540 PE=4 SV=1: OsmC\tK04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]" }, { "name":"SOIL9_46360 unnamed protein product; BLAST_uniprot: no_hits\tK04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]" }, { "name":"SOIL9_74220 peroxiredoxin : Peroxiredoxin, OsmC subfamily OS=Caulobacter segnis (strain ATCC 21756 \/ DSM 7131 \/ JCM 7823 \/ NBRC 15250 \/ LMG 17158 \/ TK0059) GN=Cseg_2089 PE=4 SV=1: OsmC\tK04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]" }, { "name":"SOIL9_57210 Uncharacterized protein OS=Methylococcus capsulatus (strain ATCC 33009 \/ NCIMB 11132 \/ Bath) GN=MCA2268 PE=3 SV=1: Pirin\tK06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]" }, { "name":"SOIL9_71080 delta 9 acyl-lipid fatty acid desaturase : Delta-9 acyl-phospholipid desaturase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_4622 PE=4 SV=1: FA_desaturase\tK23036 desC2; sn-2 palmitoyl-lipid 9-desaturase [EC:1.14.19.27]" }, { "name":"SOIL9_27610 ferredoxin--nadp reductase : Probable ferredoxin--NADP reductase OS=Planctomyces maris DSM 8797 GN=PM8797T_00487 PE=4 SV=1: NAD_binding_1\tK00528 fpr; ferredoxin\/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]" }, { "name":"SOIL9_25130 protein tyrosine phosphatase : Protein tyrosine phosphatase OS=Chlorobium sp. GBChlB GN=HY22_09850 PE=4 SV=1: LMWPc\tK03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]" }, { "name":"SOIL9_25140 Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4361 PE=4 SV=1: LMWPc\tK03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]" }, { "name":"SOIL9_11780 radical sam protein : Anaerobic ribonucleoside-triphosphate reductase-activating protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1721 PE=3 SV=1: Fer4_12: Radical_SAM\tK04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]" }, { "name":"SOIL9_35640 trans-aconitate 2-methyltransferase : Trans-aconitate 6-methyltransferase OS=Cupriavidus necator (strain ATCC 17699 \/ H16 \/ DSM 428 \/ Stanier 337) GN=H16_A0107 PE=4 SV=1\tK00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]" }, { "name":"SOIL9_65250 Methyltransferase domain family OS=Synechococcus sp. PCC 7335 GN=S7335_3388 PE=4 SV=1: Methyltransf_16\tK22843 ETFBKMT; ETFB lysine methyltransferase [EC:2.1.1.-]" }, { "name":"SOIL9_42110 gnat family acetyltransferase : Acetyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6570 PE=4 SV=1: Acetyltransf_1\tK22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]" }, { "name":"SOIL9_18060 maltose o-acetyltransferase : Putative maltose O-acetyltransferase OS=Blastopirellula marina DSM 3645 GN=DSM3645_21507 PE=4 SV=1: Mac: Hexapep\tK00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]" }, { "name":"SOIL9_21130 n-hydroxyarylamine o-acetyltransferase : Arylamine N-acetyltransferase OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_3211 PE=3 SV=1: Acetyltransf_2\tK00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]" }, { "name":"SOIL9_66070 apolipoprotein n-acyltransferase : Apolipoprotein N-acyltransferase OS=Planctomyces maris DSM 8797 GN=lnt PE=3 SV=1: CN_hydrolase\tK03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]" }, { "name":"SOIL9_57330 n-acetyltransferase : GCN5-related N-acetyltransferase OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_0689 PE=4 SV=1: Acetyltransf_10\tK03826 yiaB_C; [protein]-L-lysine N-acetyltransferase [EC:2.3.1.338]" }, { "name":"SOIL9_55300 gcn5-related n-acetyltransferase : Putative acetyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3591 PE=4 SV=1: Acetyltransf_9\tK03824 yhbS; putative acetyltransferase [EC:2.3.1.-]" }, { "name":"SOIL9_34560 acetyltransferase : Glr3142 protein OS=Gloeobacter violaceus (strain PCC 7421) GN=glr3142 PE=4 SV=1: Acetyltransf_10\tK03830 yafP; putative acetyltransferase [EC:2.3.1.-]" }, { "name":"SOIL9_01500 gnat family acetyltransferase : Putative acetyltransferase OS=uncultured Verrucomicrobia bacterium PE=4 SV=1: Acetyltransf_4\tK24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]" }, { "name":"SOIL9_45630 unnamed protein product; BLAST_uniprot: no_hits\tK24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]" }, { "name":"SOIL9_74860 leucyl phenylalanyl-trna--protein transferase : Leucyl\/phenylalanyl-tRNA--protein transferase OS=Magnetococcus sp. (strain MC-1) GN=aat PE=3 SV=1: Leu_Phe_trans\tK00684 aat; leucyl\/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]" }, { "name":"SOIL9_42290 Transglutaminase domain protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2495 PE=4 SV=1: Transglut_core: DUF4129\tK22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]" }, { "name":"SOIL9_46780 arginyl-trna-protein transferase : Putative arginyl-tRNA--protein transferase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_3091 PE=4 SV=1: ATE_N: ATE_C\tK21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]" }, { "name":"SOIL9_84900 3-oxoacyl-acp synthase : 3-Oxoacyl-(Acyl-carrier-protein (ACP)) synthase III domain protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_3323 PE=4 SV=1: ACP_syn_III: ACP_syn_III_C\tK22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20]" }, { "name":"SOIL9_21620 Glycosyltransferase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5387 PE=4 SV=1: Glyco_trans_4_4: Glycos_transf_1\tK00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]" }, { "name":"SOIL9_22470 Uncharacterized protein OS=Bdellovibrio bacteriovorus GN=EP01_16865 PE=4 SV=1: DTW\tK05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]" }, { "name":"SOIL9_22480 deoxyhypusine synthase : Deoxyhypusine synthase-like protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4928 PE=3 SV=1: DS\tK00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]" }, { "name":"SOIL9_46680 deoxyhypusine synthase : Deoxyhypusine synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2869 PE=4 SV=1: DS\tK00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]" }, { "name":"SOIL9_14130 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate carboxylase : NCAIR mutase-like protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2656 PE=4 SV=1: AIRC\tK06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]" }, { "name":"SOIL9_59260 prolipoprotein diacylglyceryl transferase : Prolipoprotein diacylglyceryl transferase OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2025 PE=4 SV=1: LGT: PDZ\tK13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]" }, { "name":"SOIL9_20880 radical sam domain-containing protein : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_28484 PE=4 SV=1: Radical_SAM\tK06936 raSEA; archaeosine synthase beta-subunit [EC:2.6.1.-]" }, { "name":"SOIL9_11390 family lipoprotein : ApbE family lipoprotein OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD0026 PE=4 SV=1: ApbE\tK03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]" }, { "name":"SOIL9_23040 family lipoprotein : ApbE family lipoprotein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_0073 PE=4 SV=1: ApbE\tK03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]" }, { "name":"SOIL9_64170 family lipoprotein : ApbE family lipoprotein OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_6260 PE=4 SV=1: ApbE: DUF2271\tK03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]" }, { "name":"SOIL9_64320 (glutamate--ammonia-ligase) adenylyltransferase : Glutamate-ammonia-ligase adenylyltransferase OS=Blastopirellula marina DSM 3645 GN=DSM3645_10057 PE=4 SV=1: GlnE: GlnD_UR_UTase: GlnE: GlnE: GlnD_UR_UTase\tK00982 glnE; [glutamine synthetase] adenylyltransferase \/ [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]" }, { "name":"SOIL9_06490 rna-directed dna polymerase : Reverse transcriptase (RNA-dependent DNA polymerase) OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3415 PE=4 SV=1: RVT_1\tK00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]" }, { "name":"SOIL9_17160 reverse transcriptase : Retron-type RNA-directed DNA polymerase protein OS=Myxococcus sp. (contaminant ex DSM 436) GN=A176_05275 PE=4 SV=1: RVT_1\tK00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]" }, { "name":"SOIL9_33580 RNA-directed DNA polymerase (Reverse transcriptase) (Fragment) OS=mine drainage metagenome GN=B1B_02047 PE=4 SV=1: RVT_1: GIIM\tK00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]" }, { "name":"SOIL9_46160 RNA-directed DNA polymerase (Reverse transcriptase) OS=mine drainage metagenome GN=B2A_12249 PE=4 SV=1: RVT_1: GIIM\tK00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]" }, { "name":"SOIL9_57520 rna-directed dna polymerase : Reverse transcriptase (RNA-dependent DNA polymerase) OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4396 PE=4 SV=1: RVT_1\tK00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]" }, { "name":"SOIL9_81920 RNA-directed DNA polymerase (Reverse transcriptase) OS=Thiothrix nivea DSM 5205 GN=Thini_3376 PE=4 SV=1: RVT_1\tK00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]" }, { "name":"SOIL9_00750 Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_23026 PE=4 SV=1: DisA_N\tK18672 dacA; diadenylate cyclase [EC:2.7.7.85]" }, { "name":"SOIL9_13950 UPF0061 protein Sinac_2759 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2759 PE=3 SV=1: UPF0061\tK08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]" }, { "name":"SOIL9_70980 pyruvate phosphate dikinase pep pyruvate-binding protein : Pyruvate phosphate dikinase PEP\/pyruvate-binding protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_04808 PE=4 SV=1: PPDK_N: PEP-utilizers\tK22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]" }, { "name":"SOIL9_76750 atp:guanido phosphotransferase : Protein-arginine kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=mcsB PE=3 SV=1: ATP-gua_Ptrans\tK19405 mcsB; protein arginine kinase [EC:2.7.14.1]" }, { "name":"SOIL9_15250 sulfotransferase domain protein : Uncharacterized protein OS=Mycobacterium canettii CIPT 140070017 GN=BN45_10647 PE=4 SV=1: Sulfotransfer_3\tK22905 stf3; omega-hydroxy-beta-dihydromenaquinone-9 sulfotransferase [EC:2.8.2.40]" }, { "name":"SOIL9_28300 sulfotransferase domain protein : Uncharacterized protein OS=Mycobacterium kansasii GN=MKSMC1_37350 PE=4 SV=1: Sulfotransfer_3\tK22905 stf3; omega-hydroxy-beta-dihydromenaquinone-9 sulfotransferase [EC:2.8.2.40]" }, { "name":"SOIL9_38720 Sialate O-acetylesterase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1978 PE=4 SV=1: DUF303\tK05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]" }, { "name":"SOIL9_30190 Uncharacterized protein OS=Fibrisoma limi BUZ 3 GN=BN8_04114 PE=4 SV=1\tK25010 GE; (4-O-methyl)-D-glucuronate---lignin esterase [EC:3.1.1.117]" }, { "name":"SOIL9_75710 Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7037 PE=4 SV=1: Abhydrolase_5\tK25010 GE; (4-O-methyl)-D-glucuronate---lignin esterase [EC:3.1.1.117]" }, { "name":"SOIL9_06630 4-hydroxybenzoyl-thioesterase : Thioesterase superfamily protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_1728 PE=4 SV=1: 4HBT_2\tK07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]" }, { "name":"SOIL9_32520 thioesterase : Acyl-CoA thioester hydrolase, YbgC\/YbaW family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_7067 PE=4 SV=1: 4HBT\tK07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]" }, { "name":"SOIL9_61660 Thioesterase superfamily protein OS=Candidatus Acetothermus autotrophicum GN=HGMM_OP3C154 PE=4 SV=1: 4HBT_2\tK07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]" }, { "name":"SOIL9_79440 exopolysaccharide biosynthesis protein : Tyrosine protein phosphatase OS=Thioalkalivibrio thiocyanoxidans ARh 4 GN=THITH_05565 PE=4 SV=1\tK01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]" }, { "name":"SOIL9_30380 metal-dependent phosphoesterase : PHP domain protein OS=Rhodothermus marinus (strain ATCC 43812 \/ DSM 4252 \/ R-10) GN=Rmar_1931 PE=4 SV=1: PHP\tK07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]" }, { "name":"SOIL9_02990 Uncharacterized protein OS=Synechococcus sp. (strain ATCC 27144 \/ PCC 6301 \/ SAUG 1402\/1) GN=syc0911_d PE=4 SV=1: His_Phos_1\tK08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]" }, { "name":"SOIL9_70800 -like fused with metal-dependent phosphohydrolase : Response regulator receiver modulated metal dependent phosphohydrolase OS=Desulfurivibrio alkaliphilus (strain DSM 19089 \/ UNIQEM U267 \/ AHT2) GN=DaAHT2_0731 PE=4 SV=1: Pkinase: Response_reg: HD\tK07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]" }, { "name":"SOIL9_02810 hydrolase : Putative deoxyribonuclease yabD OS=Planctomyces maris DSM 8797 GN=PM8797T_23711 PE=4 SV=1: TatD_DNase\tK03424 tatD; TatD DNase family protein [EC:3.1.21.-]" }, { "name":"SOIL9_10470 Uncharacterized protein conserved in bacteria OS=Hahella chejuensis (strain KCTC 2396) GN=HCH_06997 PE=4 SV=1: DUF1768\tK09935 ybiA; N-glycosidase YbiA [EC:3.2.2.-]" }, { "name":"SOIL9_18870 n-acyl-d-aspartate d-glutamate deacylase : N-acyl-D-aspartate\/D-glutamate deacylase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5669 PE=4 SV=1: Amidohydro_3: D-aminoacyl_C\tK06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]" }, { "name":"SOIL9_85280 n-acyl-d-aspartate d-glutamate deacylase : N-acyl-D-aspartate\/D-glutamate deacylase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3600 PE=4 SV=1: Amidohydro_3: D-aminoacyl_C\tK06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]" }, { "name":"SOIL9_74290 peptide deformylase : Peptide deformylase OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=def PE=3 SV=1: Pep_deformylase\tK01462 PDF; peptide deformylase [EC:3.5.1.88]" }, { "name":"SOIL9_29900 oligosaccharide deacetylase : Polysaccharide deacetylase OS=Vibrio campbellii CAIM 519 = NBRC 15631 GN=B878_00190 PE=4 SV=1: Polysacc_deac_1\tK22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]" }, { "name":"SOIL9_14210 Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_18144 PE=4 SV=1: PIG-L\tK01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]" }, { "name":"SOIL9_38820 Hypothetical conserved protein OS=uncultured planctomycete GN=HGMM_F22C11C35 PE=4 SV=1: PIG-L\tK01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]" }, { "name":"SOIL9_83470 Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_26590 PE=4 SV=1: PIG-L\tK01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]" }, { "name":"SOIL9_09690 magnesium chelatase : MoxR-like ATPase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2138 PE=4 SV=1: AAA_3\tK03924 moxR; MoxR-like ATPase [EC:3.6.3.-]" }, { "name":"SOIL9_14910 atpase aaa : MoxR-like ATPase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0405 PE=4 SV=1: AAA_3\tK03924 moxR; MoxR-like ATPase [EC:3.6.3.-]" }, { "name":"SOIL9_15500 atpase aaa : ATPase associated with various cellular activities, AAA-3 OS=Planctomyces maris DSM 8797 GN=PM8797T_07799 PE=4 SV=1: AAA_3\tK03924 moxR; MoxR-like ATPase [EC:3.6.3.-]" }, { "name":"SOIL9_19800 atpase aaa : ATPase associated with various cellular activities AAA_5 OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0540 PE=4 SV=1: AAA_5\tK03924 moxR; MoxR-like ATPase [EC:3.6.3.-]" }, { "name":"SOIL9_25340 atpase aaa : Holliday junction ATP-dependent DNA helicase ruvB OS=Medicago truncatula GN=MTR_020s0022 PE=4 SV=1: AAA_3\tK03924 moxR; MoxR-like ATPase [EC:3.6.3.-]" }, { "name":"SOIL9_26970 atpase : MoxR-like ATPase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2120 PE=4 SV=1: AAA_5\tK03924 moxR; MoxR-like ATPase [EC:3.6.3.-]" }, { "name":"SOIL9_27160 atpase aaa : Uncharacterized protein OS=Phycisphaera mikurensis (strain NBRC 102666 \/ KCTC 22515 \/ FYK2301M01) GN=PSMK_25800 PE=4 SV=1: AAA_3\tK03924 moxR; MoxR-like ATPase [EC:3.6.3.-]" }, { "name":"SOIL9_28040 atpase aaa : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_18279 PE=4 SV=1: AAA_3\tK03924 moxR; MoxR-like ATPase [EC:3.6.3.-]" }, { "name":"SOIL9_28130 atpase aaa : ATPase associated with various cellular activities AAA_3 OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1689 PE=4 SV=1: AAA_3\tK03924 moxR; MoxR-like ATPase [EC:3.6.3.-]" }, { "name":"SOIL9_33410 magnesium chelatase : MoxR-like ATPase OS=Pseudomonas sp. GM21 GN=PMI22_02969 PE=4 SV=1: AAA_3\tK03924 moxR; MoxR-like ATPase [EC:3.6.3.-]" }, { "name":"SOIL9_42270 magnesium chelatase : MoxR-like ATPase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5891 PE=4 SV=1: AAA_3\tK03924 moxR; MoxR-like ATPase [EC:3.6.3.-]" }, { "name":"SOIL9_53770 atpase aaa : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_11469 PE=4 SV=1: AAA_3\tK03924 moxR; MoxR-like ATPase [EC:3.6.3.-]" }, { "name":"SOIL9_59270 atpase : Uncharacterized protein OS=Candidatus Kuenenia stuttgartiensis GN=kuste3438 PE=4 SV=1: AAA_3\tK03924 moxR; MoxR-like ATPase [EC:3.6.3.-]" }, { "name":"SOIL9_64710 atpase aaa : Uncharacterized protein OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=RL1917 PE=4 SV=1: AAA_3\tK03924 moxR; MoxR-like ATPase [EC:3.6.3.-]" }, { "name":"SOIL9_84490 atpase aaa : ATPase associated with various cellular activities AAA_3 OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_2676 PE=4 SV=1: AAA_3\tK03924 moxR; MoxR-like ATPase [EC:3.6.3.-]" }, { "name":"SOIL9_62430 protein-tyrosine low molecular weight : Probable low molecular weight protein-tyrosine-phosphatase ywlE OS=Planctomyces maris DSM 8797 GN=PM8797T_17914 PE=4 SV=1: LMWPc\tK20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]" }, { "name":"SOIL9_84910 alpha beta hydrolase : Alpha\/beta hydrolase fold OS=Shewanella halifaxensis (strain HAW-EB4) GN=Shal_2819 PE=4 SV=1: Abhydrolase_6\tK22318 oleB; cis-3-alkyl-4-acyloxetan-2-one decarboxylase [EC:4.1.1.114]" }, { "name":"SOIL9_34130 galactarate dehydratase : Altronate dehydratase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3221 PE=4 SV=1: SAF: GD_AH_C\tK26399 K26399; arabinonate dehydratase [EC:4.2.1.5]" }, { "name":"SOIL9_62040 carbohydrate kinase : Marine sediment metagenome DNA, contig: S01H4_L00499 OS=marine sediment metagenome GN=S01H4_14240 PE=3 SV=1: Carb_kinase\tK17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]" }, { "name":"SOIL9_08210 TIGR00268 family protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0253 PE=4 SV=1: Asn_synthase\tK06864 larE; cysteine-dependent pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase [EC:4.4.1.37 4.4.1.45]" }, { "name":"SOIL9_62870 tigr00299 family protein : UPF0272 protein Sinac_2353 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2353 PE=3 SV=1: DUF111\tK09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]" }, { "name":"SOIL9_07520 Xylose isomerase domain-containing protein TIM barrel OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_0077 PE=4 SV=1: AP_endonuc_2\tK18910 dpe; D-psicose\/D-tagatose\/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31]" }, { "name":"SOIL9_47060 nad h-hydrate epimerase : NAD(P)H-hydrate epimerase OS=Planctomyces maris DSM 8797 GN=nnrE PE=3 SV=1: YjeF_N\tK17759 NAXE; NAD(P)H-hydrate epimerase [EC:5.1.99.6]" }, { "name":"SOIL9_51960 peptidylprolyl isomerase : Peptidyl-prolyl cis-trans isomerase (Fragment) OS=Trypanosomatidae sp. TS-2013 PE=3 SV=1: Pro_isomerase\tK01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]" }, { "name":"SOIL9_72960 peptidylprolyl isomerase : Peptidyl-prolyl cis-trans isomerase OS=Oscillochloris trichoides DG-6 GN=OSCT_2877 PE=4 SV=1: FKBP_C: FKBP_C\tK01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]" }, { "name":"SOIL9_84920 peptide synthase : Acyl-CoA synthetase (AMP-forming)\/AMP-acid ligase II OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3642 PE=4 SV=1: AMP-binding\tK22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1]" }, { "name":"SOIL9_73450 dna ligase : DNA ligase OS=Blastopirellula marina DSM 3645 GN=DSM3645_13253 PE=4 SV=1: DNA_ligase_A_M: DNA_ligase_OB_2: WGR\tK26441 lig; DNA ligase [EC:6.5.1.1]" }, { "name":"SOIL9_11790 rna 3 -phosphate cyclase : RNA 3''-phosphate cyclase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0456 PE=4 SV=1: RTC: RTC_insert\tK01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4]" }, { "name":"SOIL9_21380 calcium-translocating p-type pmca-type : Calcium-translocating P-type ATPase, PMCA-type OS=Methanospirillum hungatei JF-1 (strain ATCC 27890 \/ DSM 864 \/ NBRC 100397 \/ JF-1) GN=Mhun_0342 PE=4 SV=1: Cation_ATPase_N: E1-E2_ATPase: Hydrolase: Cation_ATPase_C\tK01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]" }, { "name":"SOIL9_77210 magnesium-translocating p-type atpase : Magnesium-translocating P-type ATPase OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2816 PE=3 SV=1: Cation_ATPase_N: E1-E2_ATPase: Hydrolase: Cation_ATPase_C\tK01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]" } ] }, { "name":"99981 Carbohydrate metabolism" }, { "name":"99982 Energy metabolism", "children":[ { "name":"SOIL9_33000 formate dehydrogenase accessory protein : Protein FdhD homolog OS=Rhodococcus opacus GN=fdhD PE=3 SV=1: FdhD-NarQ\tK02379 fdhD; FdhD protein" }, { "name":"SOIL9_50640 ferredoxin : 4Fe-4S ferredoxin iron-sulfur binding domain protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_1522 PE=4 SV=1: Fer4\tK05524 fdxA; ferredoxin" }, { "name":"SOIL9_62000 ferredoxin : Ferredoxin OS=Rhodopirellula baltica (strain SH1) GN=RB6415 PE=4 SV=1: Fer4_4: Fer4\tK05524 fdxA; ferredoxin" }, { "name":"SOIL9_25260 cluster assembly scaffold : Scaffolding protein OS=Alcaligenes xylosoxydans xylosoxydans GN=MC81_11325 PE=4 SV=1: NifU_N\tK04488 iscU; nitrogen fixation protein NifU and related proteins" }, { "name":"SOIL9_27860 unnamed protein product; BLAST_uniprot: no_hits\tK18683 rus; rusticyanin" } ] }, { "name":"99983 Lipid metabolism" }, { "name":"99984 Nucleotide metabolism" }, { "name":"99985 Amino acid metabolism", "children":[ { "name":"SOIL9_32850 glyoxalase bleomycin resistance protein dioxygenase : Glyoxylase I family protein OS=Herbaspirillum frisingense GSF30 GN=HFRIS_003763 PE=4 SV=1: Glyoxalase\tK08234 yaeR; glyoxylase I family protein" }, { "name":"SOIL9_82270 Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_19116 PE=3 SV=1: Ala_racemase_N\tK06997 yggS; PLP dependent protein" }, { "name":"SOIL9_53040 acetyltransferase : Acetyltransferase, GNAT family OS=Legionella pneumophila serogroup 1 (strain 2300\/99 Alcoy) GN=lpa_00445 PE=4 SV=1: Acetyltransf_3\tK22479 argA; N-acetyltransferase" } ] }, { "name":"99986 Glycan metabolism", "children":[ { "name":"SOIL9_42250 Uncharacterized protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0361 PE=4 SV=1: UPF0104\tK07027 K07027; glycosyltransferase 2 family protein" }, { "name":"SOIL9_71130 Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_10252 PE=4 SV=1: UPF0104\tK07027 K07027; glycosyltransferase 2 family protein" } ] }, { "name":"99987 Cofactor metabolism", "children":[ { "name":"SOIL9_23360 Ubiquinone biosynthesis protein UbiB OS=Rhodopirellula sp. SWK7 GN=RRSWK_02062 PE=4 SV=1: ABC1\tK03688 ubiB; ubiquinone biosynthesis protein" } ] }, { "name":"99988 Secondary metabolism", "children":[ { "name":"SOIL9_83280 Poly(3-hydroxybutyrate) depolymerase-like protein OS=Kosmotoga olearia (strain TBF 19.5.1) GN=Kole_0508 PE=4 SV=1: Abhydrolase_5\tK03932 lpqC; polyhydroxybutyrate depolymerase" }, { "name":"SOIL9_30510 fmn reductase : NADPH-dependent FMN reductase OS=Gloeobacter kilaueensis JS1 GN=GKIL_3076 PE=4 SV=1: FMN_red\tK19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)" } ] }, { "name":"99999 Others", "children":[ { "name":"SOIL9_21200 DoxX family protein OS=Burkholderia vietnamiensis (strain G4 \/ LMG 22486) GN=Bcep1808_3970 PE=4 SV=1: DoxX\tK15977 K15977; putative oxidoreductase" }, { "name":"SOIL9_07270 esterase : Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1: Abhydrolase_2\tK06999 K06999; phospholipase\/carboxylesterase" } ] } ] }, { "name":"09192 Unclassified: genetic information processing", "children":[ { "name":"99973 Transcription", "children":[ { "name":"SOIL9_09760 nitrogen regulatory protein p-ii : Nitrogen regulatory protein P-II OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0703 PE=4 SV=1: P-II\tK04752 glnK; nitrogen regulatory protein P-II 2" }, { "name":"SOIL9_19510 nitrogen regulatory protein p-ii : Nitrogen regulatory protein P-II OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0703 PE=4 SV=1: P-II\tK04752 glnK; nitrogen regulatory protein P-II 2" }, { "name":"SOIL9_38830 rna binding s1 domain protein : Transcriptional accessory protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0680 PE=4 SV=1: Tex_N: HHH_3: S1\tK06959 tex; protein Tex" } ] }, { "name":"99974 Translation", "children":[ { "name":"SOIL9_46970 Beta-lactamase domain protein OS=Solibacter usitatus (strain Ellin6076) GN=Acid_2834 PE=4 SV=1: Lactamase_B: Beta-Casp: RMMBL\tK07576 K07576; metallo-beta-lactamase family protein" }, { "name":"SOIL9_67130 Uncharacterized protein OS=Sorangium cellulosum (strain So ce56) GN=sce4166 PE=4 SV=1: Lactamase_B: Beta-Casp: RMMBL\tK07576 K07576; metallo-beta-lactamase family protein" }, { "name":"SOIL9_80950 exonuclease : RNA procession exonuclease-like protein OS=Burkholderia zhejiangensis GN=BG60_11870 PE=4 SV=1\tK07577 K07577; putative mRNA 3-end processing factor" } ] }, { "name":"99975 Protein processing", "children":[ { "name":"SOIL9_11890 atp-dependent clp protease adaptor protein : Putative uncharacterized protein OS=Rhodopirellula baltica (strain SH1) GN=RB12137 PE=4 SV=1: ClpS\tK06891 clpS; ATP-dependent Clp protease adaptor protein ClpS" }, { "name":"SOIL9_66460 modulator of substrate specificity : ATP-dependent Clp protease adapter protein ClpS OS=Blastopirellula marina DSM 3645 GN=clpS PE=3 SV=1: ClpS\tK06891 clpS; ATP-dependent Clp protease adaptor protein ClpS" }, { "name":"SOIL9_73990 atp-dependent clp protease adaptor protein : : ClpS\tK06891 clpS; ATP-dependent Clp protease adaptor protein ClpS" }, { "name":"SOIL9_76730 protein : Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_19048 PE=4 SV=1: UVR\tK19411 mcsA; protein arginine kinase activator" }, { "name":"SOIL9_76740 activator of protein kinase mcsb : UvrB\/UvrC protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_3470 PE=4 SV=1: UVR\tK19411 mcsA; protein arginine kinase activator" }, { "name":"SOIL9_55050 trigger factor : Trigger factor OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=tig PE=3 SV=1: Trigger_N: Trigger_C\tK03545 tig; trigger factor" }, { "name":"SOIL9_08090 single-stranded dna-binding protein : SsrA-binding protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=smpB PE=3 SV=1: SmpB\tK03664 smpB; SsrA-binding protein" }, { "name":"SOIL9_85610 magnesium chelatase : ComM protein OS=Planctomyces maris DSM 8797 GN=PM8797T_11069 PE=4 SV=1: ChlI: Mg_chelatase: Mg_chelatase_2\tK07391 comM; magnesium chelatase family protein" }, { "name":"SOIL9_60910 Xanthine dehydrogenase OS=Crinalium epipsammum PCC 9333 GN=Cri9333_1479 PE=4 SV=1: XdhC_CoxI: XdhC_C\tK07402 xdhC; xanthine dehydrogenase accessory factor" }, { "name":"SOIL9_12760 Membrane-bound serine protease (ClpP class) OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1414 PE=4 SV=1: NfeD\tK07403 nfeD; membrane-bound serine protease (ClpP class)" } ] }, { "name":"99976 Replication and repair", "children":[ { "name":"SOIL9_77740 Uncharacterized protein OS=Methylibium petroleiphilum (strain PM1) GN=Mpe_B0038 PE=4 SV=1: HNH_2\tK07454 K07454; putative restriction endonuclease" }, { "name":"SOIL9_40110 endonuclease : UPF0102 protein PM8797T_28449 OS=Planctomyces maris DSM 8797 GN=PM8797T_28449 PE=3 SV=1: UPF0102\tK07460 yraN; putative endonuclease" }, { "name":"SOIL9_05430 excinuclease abc c subunit domain protein : Excinuclease ABC C subunit domain protein OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_3365 PE=4 SV=1: GIY-YIG\tK07461 K07461; putative endonuclease" }, { "name":"SOIL9_41190 excinuclease abc subunit c : : GIY-YIG\tK07461 K07461; putative endonuclease" }, { "name":"SOIL9_03330 dna protecting protein : DNA protecting protein DprA OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_3430 PE=4 SV=1: HHH_5: DNA_processg_A\tK04096 smf; DNA processing protein" }, { "name":"SOIL9_25760 terminase : Phage Terminase Small Subunit OS=Fusobacterium nucleatum subsp. animalis 11_3_2 GN=HMPREF0401_01601 PE=4 SV=1: Terminase_2\tK07474 xtmA; phage terminase small subunit" }, { "name":"SOIL9_78320 terminase small subunit : Phage Terminase Small Subunit OS=Fusobacterium nucleatum subsp. animalis 11_3_2 GN=HMPREF0401_01601 PE=4 SV=1: Terminase_2\tK07474 xtmA; phage terminase small subunit" }, { "name":"SOIL9_29910 atpase aaa : AAA ATPase central domain protein OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD3365 PE=4 SV=1: RuvB_N: MgsA_C\tK07478 ycaJ; putative ATPase" }, { "name":"SOIL9_00230 phage plasmid p4 family : Predicted ATPase OS=uncultured Gemmatimonadales bacterium HF0770_11C06 PE=4 SV=1: D5_N\tK06919 K06919; putative DNA primase\/helicase" }, { "name":"SOIL9_05260 Phage\/plasmid primase, P4 family, C-terminal domain protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_4213 PE=4 SV=1\tK06919 K06919; putative DNA primase\/helicase" }, { "name":"SOIL9_36550 Phage\/plasmid primase, P4 family OS=Desulfotomaculum acetoxidans (strain ATCC 49208 \/ DSM 771 \/ VKM B-1644) GN=Dtox_3701 PE=4 SV=1: D5_N\tK06919 K06919; putative DNA primase\/helicase" }, { "name":"SOIL9_44290 Predicted ATPase OS=uncultured Gemmatimonadales bacterium HF0770_11C06 PE=4 SV=1\tK06919 K06919; putative DNA primase\/helicase" }, { "name":"SOIL9_67940 polysaccharide biosynthesis protein : Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_07794 PE=4 SV=1: DNA_pol_B_exo2\tK07501 K07501; 3'-5' exonuclease" }, { "name":"SOIL9_15590 Transposase IS66 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6249 PE=4 SV=1: DDE_Tnp_IS66\tK07484 K07484; transposase" }, { "name":"SOIL9_25640 Transposase IS66 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6249 PE=4 SV=1: DDE_Tnp_IS66\tK07484 K07484; transposase" }, { "name":"SOIL9_33740 Transposase IS66 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6249 PE=4 SV=1: zf-IS66: DDE_Tnp_IS66\tK07484 K07484; transposase" }, { "name":"SOIL9_43650 Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_28142 PE=4 SV=1: DDE_Tnp_IS66\tK07484 K07484; transposase" }, { "name":"SOIL9_60490 IS66 family element, transposase OS=Rhodopirellula europaea 6C GN=RE6C_02664 PE=4 SV=1: LZ_Tnp_IS66: zf-IS66: DDE_Tnp_IS66: DDE_Tnp_IS66_C\tK07484 K07484; transposase" }, { "name":"SOIL9_60500 Transposase IS66 OS=Rhodopirellula baltica WH47 GN=RBWH47_03457 PE=4 SV=1: TnpB_IS66\tK07484 K07484; transposase" }, { "name":"SOIL9_19550 unnamed protein product; BLAST_uniprot: no_hits\tK07491 rayT; REP-associated tyrosine transposase" }, { "name":"SOIL9_20320 transposase mutator type : Transposase OS=Neosynechococcus sphagnicola sy1 GN=DO97_10765 PE=4 SV=1: Transposase_mut\tK07493 K07493; putative transposase" }, { "name":"SOIL9_22700 mutator type : Uncharacterized protein OS=Acinetobacter sp. CIP 102129 GN=F973_00524 PE=4 SV=1: Transposase_mut\tK07493 K07493; putative transposase" }, { "name":"SOIL9_26400 Transposase OS=Neosynechococcus sphagnicola sy1 GN=DO97_10765 PE=4 SV=1: Transposase_mut\tK07493 K07493; putative transposase" }, { "name":"SOIL9_35650 transposase mutator type : Transposase OS=Neosynechococcus sphagnicola sy1 GN=DO97_10765 PE=4 SV=1: Transposase_mut\tK07493 K07493; putative transposase" }, { "name":"SOIL9_40300 transposase mutator type : Transposase OS=Neosynechococcus sphagnicola sy1 GN=DO97_10765 PE=4 SV=1: Transposase_mut\tK07493 K07493; putative transposase" }, { "name":"SOIL9_52600 Transposase OS=Neosynechococcus sphagnicola sy1 GN=DO97_10765 PE=4 SV=1: Transposase_mut\tK07493 K07493; putative transposase" }, { "name":"SOIL9_56830 transposase mutator type : Transposase OS=Neosynechococcus sphagnicola sy1 GN=DO97_10765 PE=4 SV=1: Transposase_mut\tK07493 K07493; putative transposase" }, { "name":"SOIL9_78890 transposase : Putative transposase OS=Blastopirellula marina DSM 3645 GN=DSM3645_27508 PE=4 SV=1: Transposase_mut\tK07493 K07493; putative transposase" }, { "name":"SOIL9_79820 mutator family : Transposase, Mutator family OS=Edwardsiella ictaluri (strain 93-146) GN=NT01EI_1510 PE=4 SV=2: Transposase_mut: DDE_3\tK07493 K07493; putative transposase" }, { "name":"SOIL9_25080 transposase is3 : Mobile element protein OS=Cystobacter fuscus DSM 2262 GN=D187_008851 PE=4 SV=1\tK07497 K07497; putative transposase" }, { "name":"SOIL9_32430 transposase : Integrase core domain protein OS=Legionella massiliensis GN=BN1094_01089 PE=4 SV=1: rve\tK07497 K07497; putative transposase" }, { "name":"SOIL9_33550 transposase : IS5 family transposase orfB OS=Myxococcus stipitatus (strain DSM 14675 \/ JCM 12634 \/ Mx s8) GN=MYSTI_05956 PE=4 SV=1: rve\tK07497 K07497; putative transposase" }, { "name":"SOIL9_35390 transposase : Integrase, catalytic region OS=Candidatus Contendobacter odensis Run_B_J11 GN=BN874_1700001 PE=4 SV=1: HTH_21: rve\tK07497 K07497; putative transposase" }, { "name":"SOIL9_51580 transposase : Marine sediment metagenome DNA, contig: S03H2_S04256 (Fragment) OS=marine sediment metagenome GN=S03H2_33945 PE=4 SV=1: rve\tK07497 K07497; putative transposase" }, { "name":"SOIL9_80050 transposase : Integrase, catalytic region OS=Candidatus Contendobacter odensis Run_B_J11 GN=BN874_1700001 PE=4 SV=1: rve\tK07497 K07497; putative transposase" } ] }, { "name":"99979 Viral proteins" }, { "name":"99998 Others", "children":[ { "name":"SOIL9_28280 nucleoid-associated protein : Nucleoid-associated protein Sinac_1311 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1311 PE=3 SV=1: YbaB_DNA_bd\tK09747 ebfC; nucleoid-associated protein EbfC" } ] } ] }, { "name":"09193 Unclassified: signaling and cellular processes", "children":[ { "name":"99977 Transport", "children":[ { "name":"SOIL9_30750 amino acid transporter : Amino acid transporter OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6857 PE=4 SV=1: AA_permease_2\tK03294 TC.APA; basic amino acid\/polyamine antiporter, APA family" }, { "name":"SOIL9_07200 uncharacterized transporter yclf : Peptide ABC transporter OS=Schleiferia thermophila str. Yellowstone GN=AT05_09120 PE=3 SV=1: PTR2\tK03305 TC.POT; proton-dependent oligopeptide transporter, POT family" }, { "name":"SOIL9_25850 amino acid peptide transporter : Amino acid\/peptide transporter OS=Nitrospirillum amazonense Y2 GN=AZA_58783 PE=3 SV=1: PTR2: PTR2\tK03305 TC.POT; proton-dependent oligopeptide transporter, POT family" }, { "name":"SOIL9_28890 phosphate permease : Phosphate transporter OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_2816 PE=4 SV=1: PHO4\tK03306 TC.PIT; inorganic phosphate transporter, PiT family" }, { "name":"SOIL9_39510 inorganic phosphate transporter : Probable low-affinity inorganic phosphate permease OS=Sorangium cellulosum (strain So ce56) GN=pit1 PE=4 SV=1: PHO4\tK03306 TC.PIT; inorganic phosphate transporter, PiT family" }, { "name":"SOIL9_32030 sss sodium solute transporter : SSS sodium solute transporter OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2852 PE=3 SV=1: SSF\tK03307 TC.SSS; solute:Na+ symporter, SSS family" }, { "name":"SOIL9_08740 bile acid:sodium symporter : Bile acid:sodium symporter, BASS family OS=gamma proteobacterium Hiromi1 GN=TBH_C2172 PE=4 SV=1: SBF\tK03453 TC.BASS; bile acid:Na+ symporter, BASS family" }, { "name":"SOIL9_24530 na+-dependent transporter : Sodium-dependent transporter OS=Nitrosospira sp. APG3 GN=EBAPG3_12230 PE=4 SV=1: SBF\tK03453 TC.BASS; bile acid:Na+ symporter, BASS family" }, { "name":"SOIL9_47730 na+-dependent transporter : Sodium-dependent transporter OS=Nitrosospira sp. APG3 GN=EBAPG3_12230 PE=4 SV=1: SBF\tK03453 TC.BASS; bile acid:Na+ symporter, BASS family" }, { "name":"SOIL9_32730 Na+ dependent nucleoside transporter domain protein OS=Solibacter usitatus (strain Ellin6076) GN=Acid_5232 PE=4 SV=1: Nucleos_tra2_N: Gate: Nucleos_tra2_C\tK03317 TC.CNT; concentrative nucleoside transporter, CNT family" } ] }, { "name":"99978 Cell growth", "children":[ { "name":"SOIL9_02640 Spore coat protein H OS=Sorangium cellulosum (strain So ce56) GN=sce7841 PE=4 SV=1: CotH\tK06330 cotH; spore coat protein H" }, { "name":"SOIL9_76350 Allophanate hydrolase subunit 1 OS=Fimbriimonas ginsengisoli Gsoil 348 GN=OP10G_2085 PE=4 SV=1: AHS1\tK06351 kipI; inhibitor of KinA" }, { "name":"SOIL9_77030 family protein : SpoVG family protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_3729 PE=4 SV=1: SpoVG\tK06412 spoVG; stage V sporulation protein G" }, { "name":"SOIL9_34480 Hypothetical conserved protein OS=uncultured planctomycete GN=HGMM_F13D05C23 PE=4 SV=1: SpoVR\tK06415 spoVR; stage V sporulation protein R" } ] }, { "name":"99993 Cell motility" }, { "name":"99995 Signaling proteins", "children":[ { "name":"SOIL9_02980 gtp-binding protein : GTP-binding protein TypA OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1239 PE=4 SV=1: GTP_EFTU: GTP_EFTU_D2: EFG_C\tK06207 typA; GTP-binding protein" }, { "name":"SOIL9_40770 family protein : Phosphate starvation-inducible protein PhoH, predicted ATPase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6811 PE=4 SV=1: PhoH\tK06217 phoH; phosphate starvation-inducible protein PhoH and related proteins" }, { "name":"SOIL9_34530 serine protein kinase : Serine protein kinase OS=uncultured planctomycete GN=HGMM_F13D05C25 PE=4 SV=1: AAA_PrkA: PrkA\tK07180 prkA; serine protein kinase" }, { "name":"SOIL9_04770 circadian clock protein : Putative circadian clock protein, KaiC OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD2769 PE=4 SV=1: KaiC: KaiC\tK08482 kaiC; circadian clock protein KaiC" }, { "name":"SOIL9_25950 circadian clock protein : KaiC family protein OS=Asticcacaulis biprosthecum C19 GN=ABI_22470 PE=4 SV=1: KaiC: KaiC\tK08482 kaiC; circadian clock protein KaiC" }, { "name":"SOIL9_49340 circadian clock protein : Uncharacterized protein OS=Cystobacter fuscus DSM 2262 GN=D187_001692 PE=4 SV=1: KaiC: KaiC\tK08482 kaiC; circadian clock protein KaiC" }, { "name":"SOIL9_80870 circadian clock protein : KaiC family protein OS=Asticcacaulis biprosthecum C19 GN=ABI_22470 PE=4 SV=1: KaiC: KaiC\tK08482 kaiC; circadian clock protein KaiC" }, { "name":"SOIL9_57120 Putative uncharacterized protein OS=Coleofasciculus chthonoplastes PCC 7420 GN=MC7420_108 PE=4 SV=1: Bax1-I\tK24205 TMBIM; protein lifeguard" } ] }, { "name":"99992 Structural proteins", "children":[ { "name":"SOIL9_72950 tetratricopeptide tpr_1 repeat-containing protein : Tetratricopeptide domain protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_3954 PE=4 SV=1: TPR_11\tK05803 nlpI; lipoprotein NlpI" }, { "name":"SOIL9_29100 sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6419 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2: HlyD_2\tK02005 ABC.CD.TX; HlyD family secretion protein" }, { "name":"SOIL9_30010 Hypothetical conserved protein OS=uncultured planctomycete GN=HGMM_F12C05C06 PE=4 SV=1: HlyD\tK02005 ABC.CD.TX; HlyD family secretion protein" }, { "name":"SOIL9_45790 rnd family efflux transporter mfp subunit : RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5744 PE=4 SV=1: HlyD_2\tK02005 ABC.CD.TX; HlyD family secretion protein" }, { "name":"SOIL9_68990 Secretion protein HlyD family protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2961 PE=4 SV=1: HlyD_2\tK02005 ABC.CD.TX; HlyD family secretion protein" } ] }, { "name":"99994 Others", "children":[ { "name":"SOIL9_39530 Phosphate-specific transport system accessory protein PhoU OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_2420 PE=3 SV=1: PhoU\tK02039 phoU; phosphate transport system protein" }, { "name":"SOIL9_31940 : Fer2_BFD\tK02192 bfd; bacterioferritin-associated ferredoxin" } ] } ] }, { "name":"09194 Poorly characterized", "children":[ { "name":"99996 General function prediction only", "children":[ { "name":"SOIL9_40230 dehydrogenase : Oxidoreductase domain protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_2920 PE=4 SV=1: GFO_IDH_MocA\tK03810 mviM; virulence factor" }, { "name":"SOIL9_47040 export-related chaperone : Export-related chaperone CsaA OS=Meiothermus silvanus (strain ATCC 700542 \/ DSM 9946 \/ VI-R2) GN=Mesil_2609 PE=4 SV=1: tRNA_bind\tK06878 K06878; tRNA-binding protein" }, { "name":"SOIL9_08860 esterase : Patatin domain protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_01371 PE=4 SV=1: cNMP_binding: Patatin\tK07001 K07001; NTE family protein" }, { "name":"SOIL9_33450 haloacid dehalogenase superfamily subfamily -2-like had subfamily ia : Haloacid dehalogenase superfamily enzyme, subfamily IA OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5298 PE=4 SV=1: HAD_2\tK07025 K07025; putative hydrolase of the HAD superfamily" }, { "name":"SOIL9_37000 Putative uncharacterized protein OS=Streptomyces himastatinicus ATCC 53653 GN=SSOG_04500 PE=4 SV=1: HAD_2\tK07025 K07025; putative hydrolase of the HAD superfamily" }, { "name":"SOIL9_17340 ribonuclease bn : Ribonuclease BN OS=Calothrix sp. PCC 7507 GN=Cal7507_5077 PE=4 SV=1: Virul_fac_BrkB\tK07058 K07058; membrane protein" }, { "name":"SOIL9_81020 ribonuclease bn : Ribonuclease BN OS=Gloeocapsa sp. PCC 7428 GN=Glo7428_4543 PE=4 SV=1: Virul_fac_BrkB\tK07058 K07058; membrane protein" }, { "name":"SOIL9_47310 family transcriptional regulator : DeoR family transcriptional regulator OS=Mesorhizobium sp. LNHC252B00 GN=X743_07280 PE=4 SV=1: Abhydrolase_5\tK07100 K07100; putative phosphoribosyl transferase" }, { "name":"SOIL9_73430 Uncharacterized protein OS=Mycobacterium neoaurum VKM Ac-1815D GN=D174_23100 PE=4 SV=1: Glyoxalase_2\tK04750 phnB; PhnB protein" }, { "name":"SOIL9_76770 glyoxalase : Glyoxalase\/bleomycin resistance protein\/dioxygenase (Dioxygenase) OS=Ralstonia solanacearum CFBP2957 GN=RCFBP_21344 PE=4 SV=1: Glyoxalase_2\tK04750 phnB; PhnB protein" }, { "name":"SOIL9_30250 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5575 PE=4 SV=1: DUF336\tK11477 glcG; glc operon protein GlcG" }, { "name":"SOIL9_62830 Hypothetical membrane protein OS=Gemmatimonas aurantiaca (strain T-27 \/ DSM 14586 \/ JCM 11422 \/ NBRC 100505) GN=GAU_2047 PE=4 SV=1: SNARE_assoc\tK03975 dedA; membrane-associated protein" }, { "name":"SOIL9_29130 Uncharacterized protein OS=Ralstonia sp. AU12-08 GN=C404_28245 PE=4 SV=1: Cupin_2\tK11312 K11312; cupin 2 domain-containing protein" }, { "name":"SOIL9_10210 membrane protein : Putative transmembrane protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_14830 PE=4 SV=1: DUF417\tK21741 rclC; reactive chlorine resistance protein C" } ] }, { "name":"99997 Function unknown", "children":[ { "name":"SOIL9_10590 ankyrin : Ankyrin OS=Pseudomonas syringae GN=IV02_05990 PE=4 SV=1: Ank_2\tK06867 K06867; uncharacterized protein" }, { "name":"SOIL9_65740 ankyrin repeat : Uncharacterized protein OS=Candidatus Methylomirabilis oxyfera GN=DAMO_0761 PE=4 SV=1: Ank_2: Ank_2\tK06867 K06867; uncharacterized protein" }, { "name":"SOIL9_66040 Uncharacterized protein OS=Microlunatus phosphovorus (strain ATCC 700054 \/ DSM 10555 \/ JCM 9379 \/ NBRC 101784 \/ NCIMB 13414 \/ VKM Ac-1990 \/ NM-1) GN=MLP_52680 PE=4 SV=1: HD\tK06885 K06885; uncharacterized protein" }, { "name":"SOIL9_47130 thioredoxin domain-containing protein : Thioredoxin domain protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5043 PE=4 SV=1: Thioredox_DsbH: DsbC\tK06888 K06888; uncharacterized protein" }, { "name":"SOIL9_62740 thioredoxin domain-containing protein : Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_08327 PE=4 SV=1: Thioredox_DsbH: GlcNAc_2-epim\tK06888 K06888; uncharacterized protein" }, { "name":"SOIL9_02730 Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_20618 PE=4 SV=1: Abhydrolase_5\tK06889 K06889; uncharacterized protein" }, { "name":"SOIL9_03750 Putative uncharacterized protein OS=marine gamma proteobacterium HTCC2148 GN=GPB2148_1827 PE=4 SV=1: Abhydrolase_6\tK06889 K06889; uncharacterized protein" }, { "name":"SOIL9_07020 Alpha\/beta fold family hydrolase OS=Pseudomonas sp. Chol1 GN=C211_02196 PE=4 SV=1: Abhydrolase_6\tK06889 K06889; uncharacterized protein" }, { "name":"SOIL9_49760 Putative enzyme (3.4.-) OS=Candidatus Methylomirabilis oxyfera GN=DAMO_3017 PE=4 SV=1: Abhydrolase_5\tK06889 K06889; uncharacterized protein" }, { "name":"SOIL9_65810 Uncharacterized protein OS=Cystobacter fuscus DSM 2262 GN=D187_000964 PE=4 SV=1: Abhydrolase_6\tK06889 K06889; uncharacterized protein" }, { "name":"SOIL9_72140 Putative lysophospholipase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6214 PE=4 SV=1: Abhydrolase_5\tK06889 K06889; uncharacterized protein" }, { "name":"SOIL9_03090 Ketosteroid isomerase-like protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3388 PE=4 SV=1: SnoaL_2\tK06893 K06893; uncharacterized protein" }, { "name":"SOIL9_26080 Uncharacterized protein OS=Fibrella aestuarina BUZ 2 GN=FAES_3406 PE=4 SV=1: SnoaL_2\tK06893 K06893; uncharacterized protein" }, { "name":"SOIL9_84100 Ketosteroid isomerase-like protein OS=Microvirga lotononidis GN=MicloDRAFT_00035400 PE=4 SV=1: SnoaL_2\tK06893 K06893; uncharacterized protein" }, { "name":"SOIL9_11470 atp-dependent carboligase : Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_08712 PE=4 SV=1: ATP-grasp_3\tK06913 K06913; uncharacterized protein" }, { "name":"SOIL9_30600 Uncharacterized protein OS=Desulfonatronospira thiodismutans ASO3-1 GN=Dthio_PD0221 PE=4 SV=1: DUF463\tK06918 K06918; uncharacterized protein" }, { "name":"SOIL9_75370 Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_01741 PE=4 SV=1: CxxCxxCC\tK06940 K06940; uncharacterized protein" }, { "name":"SOIL9_59150 gtp-binding protein hsr1-related protein : GTP-binding protein HSR1-related protein OS=Rhodopirellula maiorica SM1 GN=RMSM_06255 PE=4 SV=1: MMR_HSR1\tK06946 K06946; uncharacterized protein" }, { "name":"SOIL9_80980 dead deah box helicase : Metallophosphoesterase, DNA ligase-associated OS=uncultured bacterium PE=4 SV=1\tK06953 K06953; uncharacterized protein" }, { "name":"SOIL9_50160 Uncharacterized protein OS=Isosphaera pallida (strain ATCC 43644 \/ DSM 9630 \/ IS1B) GN=Isop_0059 PE=4 SV=1: NYN_YacP\tK06962 K06962; uncharacterized protein" }, { "name":"SOIL9_51120 x-pro dipeptidyl-peptidase : X-Pro dipeptidyl-peptidase OS=Tolypothrix bouteillei VB521301 GN=DA73_000000127635 PE=4 SV=1: Peptidase_S15: PepX_C\tK06978 K06978; uncharacterized protein" }, { "name":"SOIL9_76160 x-pro dipeptidyl-peptidase : Putative hydrolase, CocE\/NonD family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2220 PE=4 SV=1: Peptidase_S15: PepX_C\tK06978 K06978; uncharacterized protein" }, { "name":"SOIL9_10190 pyridoxamine 5 -phosphate oxidase : Pyridoxamine 5'-phosphate oxidase-related, FMN-binding OS=Blastopirellula marina DSM 3645 GN=DSM3645_14815 PE=4 SV=1: Pyridox_oxidase\tK07006 K07006; uncharacterized protein" }, { "name":"SOIL9_26090 alpha beta hydrolase : Alpha\/beta hydrolase superfamily enzyme, predicted hydrolase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_0966 PE=4 SV=1: Abhydrolase_5\tK07020 K07020; uncharacterized protein" }, { "name":"SOIL9_65090 amidohydrolase : Metallo-dependent hydrolase OS=Candidatus Nitrosoarchaeum limnia SFB1 GN=Nlim_0884 PE=4 SV=1: Amidohydro_2\tK07045 K07045; uncharacterized protein" }, { "name":"SOIL9_20510 metal-dependent hydrolase : Putative metal-dependent hydrolase with TIM-barrel fold OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1748 PE=4 SV=1: TatD_DNase\tK07051 K07051; uncharacterized protein" }, { "name":"SOIL9_11680 Uncharacterized protein OS=Dyadobacter fermentans (strain ATCC 700827 \/ DSM 18053 \/ NS114) GN=Dfer_0335 PE=4 SV=1: Zn_peptidase\tK07054 K07054; uncharacterized protein" }, { "name":"SOIL9_68510 nad-dependent epimerase : Uncharacterized protein OS=Koribacter versatilis (strain Ellin345) GN=Acid345_0624 PE=4 SV=1: Epimerase: DUF1731\tK07071 K07071; uncharacterized protein" }, { "name":"SOIL9_83440 nucleoside-diphosphate sugar epimerase : Nucleoside-diphosphate sugar epimerase OS=Cystobacter violaceus Cb vi76 GN=Q664_13690 PE=4 SV=1: Epimerase: DUF1731\tK07071 K07071; uncharacterized protein" }, { "name":"SOIL9_23110 Uncharacterized protein OS=Rhodopirellula maiorica SM1 GN=RMSM_07286 PE=4 SV=1: Nuc-transf\tK07074 K07074; uncharacterized protein" }, { "name":"SOIL9_53180 Uncharacterized protein OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD6468 PE=4 SV=1: Nuc-transf\tK07074 K07074; uncharacterized protein" }, { "name":"SOIL9_27540 Putative permease OS=Bacillus methanolicus PB1 GN=PB1_03625 PE=4 SV=1: DUF318\tK07089 K07089; uncharacterized protein" }, { "name":"SOIL9_10370 sulfite exporter : Uncharacterized protein OS=Aquimarina sp. 22II-S11-z7 GN=ATO12_05965 PE=4 SV=1: TauE\tK07090 K07090; uncharacterized protein" }, { "name":"SOIL9_67840 sulfite exporter : Uncharacterized protein OS=Solibacter usitatus (strain Ellin6076) GN=Acid_5931 PE=4 SV=1: TauE\tK07090 K07090; uncharacterized protein" }, { "name":"SOIL9_42490 Phosphodiesterase, MJ0936 family OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1399 PE=4 SV=1: Metallophos_2\tK07095 K07095; uncharacterized protein" }, { "name":"SOIL9_76480 Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_08702 PE=4 SV=1: Metallophos_2\tK07095 K07095; uncharacterized protein" }, { "name":"SOIL9_23960 phosphoesterase : Calcineurin-like phosphoesterase OS=Polaribacter sp. Hel1_85 GN=PHEL85_0238 PE=4 SV=1: Metallophos_2\tK07098 K07098; uncharacterized protein" }, { "name":"SOIL9_39650 phosphoesterase : Metallophosphoesterase OS=uncultured planctomycete GN=HGMM_F11F07C07 PE=4 SV=1: Metallophos_2\tK07098 K07098; uncharacterized protein" }, { "name":"SOIL9_66490 metallophosphoesterase : Putative phosphohydrolase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_2611 PE=4 SV=1: Metallophos\tK07098 K07098; uncharacterized protein" }, { "name":"SOIL9_69710 metallophosphoesterase : Marine sediment metagenome DNA, contig: S01H1_S40665 (Fragment) OS=marine sediment metagenome GN=S01H1_81852 PE=4 SV=1: Metallophos\tK07098 K07098; uncharacterized protein" }, { "name":"SOIL9_19830 lysine methyltransferase : Uncharacterized protein OS=Methanosarcina mazei (strain ATCC BAA-159 \/ DSM 3647 \/ Goe1 \/ Go1 \/ JCM 11833 \/ OCM 88) GN=MM_2845 PE=4 SV=1: SET\tK07117 K07117; uncharacterized protein" }, { "name":"SOIL9_39100 nuclear protein set : SET domain-containing protein OS=Methanoregula formicica (strain DSM 22288 \/ NBRC 105244 \/ SMSP) GN=Metfor_0594 PE=4 SV=1: SET\tK07117 K07117; uncharacterized protein" }, { "name":"SOIL9_81730 lysine methyltransferase :\tK07117 K07117; uncharacterized protein" }, { "name":"SOIL9_19610 3-beta hydroxysteroid dehydrogenase OS=Paenibacillus sp. MSt1 GN=ET33_05360 PE=4 SV=1: NAD_binding_10\tK07118 K07118; uncharacterized protein" }, { "name":"SOIL9_83640 short-chain dehydrogenase : Short-chain dehydrogenase\/reductase SDR OS=Haloferax elongans ATCC BAA-1513 GN=C453_17874 PE=3 SV=1: adh_short\tK07124 K07124; uncharacterized protein" }, { "name":"SOIL9_17690 sel1 domain-containing protein : Sel1 domain protein repeat-containing protein OS=Magnetococcus sp. (strain MC-1) GN=Mmc1_2003 PE=4 SV=1: Sel1: Sel1: Sel1: Sel1: Sel1: Sel1: Sel1: Sel1\tK07126 K07126; uncharacterized protein" }, { "name":"SOIL9_72980 cobalamin biosynthesis protein : Sel1 domain protein repeat-containing protein OS=Magnetococcus sp. (strain MC-1) GN=Mmc1_2003 PE=4 SV=1: Pkinase: Sel1: Sel1: Sel1: Sel1: Sel1: Sel1: Sel1: Sel1: Sel1: Sel1: Sel1: Sel1\tK07126 K07126; uncharacterized protein" }, { "name":"SOIL9_31340 FAD-dependent dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_3551 PE=4 SV=1: NAD_binding_8: DAO\tK07137 K07137; uncharacterized protein" }, { "name":"SOIL9_19950 peptidase s16 lon domain protein : Peptidase S16 lon domain protein OS=Pirellula staleyi (strain ATCC 27377 \/ DSM 6068 \/ ICPB 4128) GN=Psta_2708 PE=4 SV=1: LON\tK07157 K07157; uncharacterized protein" }, { "name":"SOIL9_03940 Uncharacterized protein OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_0030 PE=4 SV=1: DUF164\tK07164 K07164; uncharacterized protein" }, { "name":"SOIL9_00840 membrane protein insertion efficiency factor : Putative membrane protein insertion efficiency factor OS=Planctomyces limnophilus (strain ATCC 43296 \/ DSM 3776 \/ IFAM 1008 \/ 290) GN=Plim_1541 PE=3 SV=1: Haemolytic\tK08998 K08998; uncharacterized protein" }, { "name":"SOIL9_17830 protein containing duf151 : Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6056 PE=4 SV=1: DNase-RNase\tK08999 K08999; uncharacterized protein" }, { "name":"SOIL9_15660 family protein : YqeY family protein OS=Coprothermobacter proteolyticus (strain ATCC 35245 \/ DSM 5265 \/ BT) GN=COPRO5265_0510 PE=4 SV=1: YqeY\tK09117 K09117; uncharacterized protein" }, { "name":"SOIL9_61550 family protein : YqeY family protein OS=Coprothermobacter proteolyticus (strain ATCC 35245 \/ DSM 5265 \/ BT) GN=COPRO5265_0510 PE=4 SV=1: YqeY\tK09117 K09117; uncharacterized protein" }, { "name":"SOIL9_65470 UPF0235 protein HGMM_OP4C819 OS=Candidatus Acetothermus autotrophicum GN=HGMM_OP4C819 PE=3 SV=1: DUF167\tK09131 K09131; uncharacterized protein" }, { "name":"SOIL9_19970 protein containing duf447 : Conserved protein OS=Gemmata sp. Wa1-1 PE=4 SV=1: DUF447\tK09154 K09154; uncharacterized protein" }, { "name":"SOIL9_67290 Uncharacterized protein OS=Vibrio sp. AND4 GN=AND4_07959 PE=4 SV=1: YfbU\tK09161 K09161; uncharacterized protein" }, { "name":"SOIL9_02210 Uncharacterized protein OS=Herpetosiphon aurantiacus (strain ATCC 23779 \/ DSM 785) GN=Haur_0637 PE=4 SV=1: DUF2071\tK09166 K09166; uncharacterized protein" }, { "name":"SOIL9_83790 : COXG\tK09386 K09386; uncharacterized protein" }, { "name":"SOIL9_66050 Uncharacterized protein OS=Methanocella conradii (strain DSM 24694 \/ JCM 17849 \/ CGMCC 1.5162 \/ HZ254) GN=Mtc_0874 PE=4 SV=1\tK09388 K09388; uncharacterized protein" }, { "name":"SOIL9_01830 Uncharacterized protein OS=Koribacter versatilis (strain Ellin345) GN=Acid345_1992 PE=4 SV=1: Cupin_5\tK09705 K09705; uncharacterized protein" }, { "name":"SOIL9_21670 hypothetical protein, partial : Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_1079 PE=4 SV=1: DUF790\tK09744 K09744; uncharacterized protein" }, { "name":"SOIL9_70900 Putative uncharacterized protein OS=Desulfotomaculum carboxydivorans (strain DSM 14880 \/ VKM B-2319 \/ CO-1-SRB) GN=Desca_0783 PE=4 SV=1: DUF503\tK09764 K09764; uncharacterized protein" }, { "name":"SOIL9_66020 UPF0178 protein EP01_16045 OS=Bdellovibrio bacteriovorus GN=EP01_16045 PE=3 SV=1: DUF188\tK09768 K09768; uncharacterized protein" }, { "name":"SOIL9_40250 YCII-related OS=Burkholderia phymatum (strain DSM 17167 \/ STM815) GN=Bphy_1054 PE=4 SV=1: YCII\tK09780 K09780; uncharacterized protein" }, { "name":"SOIL9_76440 YCII-related domain superfamily OS=Thermomicrobium roseum (strain ATCC 27502 \/ DSM 5159 \/ P-2) GN=trd_1826 PE=4 SV=1: YCII\tK09780 K09780; uncharacterized protein" }, { "name":"SOIL9_34520 Hypothetical conserved protein OS=uncultured planctomycete GN=HGMM_F13D05C24 PE=4 SV=1: DUF444: DUF444\tK09786 K09786; uncharacterized protein" }, { "name":"SOIL9_69950 Uncharacterized protein OS=Candidatus Entotheonella sp. TSY1 GN=ETSY1_28640 PE=4 SV=1: DUF454\tK09790 K09790; uncharacterized protein" }, { "name":"SOIL9_28170 UPF0753 protein Sinac_5055 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_5055 PE=3 SV=1: DUF2309\tK09822 K09822; uncharacterized protein" }, { "name":"SOIL9_21650 Uncharacterized protein OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_2611 PE=4 SV=1\tK09859 K09859; uncharacterized protein" }, { "name":"SOIL9_50170 conserved domain protein : DNA gyrase inhibitor YacG OS=Cystobacter fuscus DSM 2262 GN=yacG PE=3 SV=1: DUF329\tK09862 K09862; uncharacterized protein" }, { "name":"SOIL9_63460 Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6325 PE=4 SV=1: DUF480\tK09915 K09915; uncharacterized protein" }, { "name":"SOIL9_16360 Uncharacterized protein OS=Planctomyces brasiliensis (strain ATCC 49424 \/ DSM 5305 \/ JCM 21570 \/ NBRC 103401 \/ IFAM 1448) GN=Plabr_3606 PE=4 SV=1: DUF692\tK09930 K09930; uncharacterized protein" }, { "name":"SOIL9_64180 PepSY-associated TM helix domain protein OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_6259 PE=4 SV=1: PepSY_TM_1: PepSY_TM_1\tK09939 K09939; uncharacterized protein" }, { "name":"SOIL9_59310 Uncharacterized protein OS=Desulfococcus oleovorans (strain DSM 6200 \/ Hxd3) GN=Dole_3082 PE=4 SV=1: Tic20\tK09940 K09940; uncharacterized protein" }, { "name":"SOIL9_27410 Uncharacterized protein OS=Limnobacter sp. MED105 GN=LMED105_08820 PE=4 SV=1: DUF1415\tK09941 K09941; uncharacterized protein" }, { "name":"SOIL9_23030 Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 \/ DSM 18658 \/ VKM B-2454 \/ MOB10) GN=Sinac_6872 PE=4 SV=1\tK09942 K09942; uncharacterized protein" }, { "name":"SOIL9_10220 50s ribosomal protein l21 : Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_14825 PE=4 SV=1: DUF1348\tK09958 K09958; uncharacterized protein" }, { "name":"SOIL9_11670 Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_25406 PE=4 SV=1: DUF2237\tK09966 K09966; uncharacterized protein" }, { "name":"SOIL9_39520 Phosphate transport regulator OS=Syntrophus aciditrophicus (strain SB) GN=SYN_02545 PE=4 SV=1: PhoU_div\tK07220 K07220; uncharacterized protein" } ] } ] } ] } ] }