{
	"name":"kps03009",
	"children":[
	{
		"name":"Eukaryotic type",
		"children":[
		{
			"name":"Sno RNPs",
			"children":[
			{
				"name":"Box C\/D snoRNPs"
			},
			{
				"name":"Box H\/ACA snoRNPs"
			}
			]
		},
		{
			"name":"90S particles",
			"children":[
			{
				"name":"U3 small nucleolar RNA-associated proteins"
			},
			{
				"name":"Helicases"
			},
			{
				"name":"GTPase"
			},
			{
				"name":"RNase",
				"children":[
				{
					"name":"KPNJ2_01412 Ribonuclease III\tK03685 rnc; ribonuclease III [EC:3.1.26.3]"
				}
				]
			},
			{
				"name":"Kinase"
			},
			{
				"name":"Other 90S particles"
			}
			]
		},
		{
			"name":"Pre-40S particles",
			"children":[
			{
				"name":"Kinases"
			},
			{
				"name":"Export and cytoplasmic maturation factors"
			},
			{
				"name":"Other pre-40S particles"
			}
			]
		},
		{
			"name":"Pre-60S particles",
			"children":[
			{
				"name":"Helicases"
			},
			{
				"name":"GTPases"
			},
			{
				"name":"RNases",
				"children":[
				{
					"name":"KPNJ2_05016 Oligoribonuclease\tK13288 orn; oligoribonuclease [EC:3.1.-.-]"
				},
				{
					"name":"RNase MRP"
				}
				]
			},
			{
				"name":"Kinases"
			},
			{
				"name":"Export and cytoplasmic maturation factors"
			},
			{
				"name":"55LCC heterohexameric ATPase complex"
			},
			{
				"name":"5-FMC complex"
			},
			{
				"name":"Ribosome quality control proteins"
			},
			{
				"name":"Other pre-60S particles"
			}
			]
		},
		{
			"name":"Other ribosome biogenesis factors",
			"children":[
			{
				"name":"KPNJ2_01413 GTP-binding protein era\tK03595 era; GTPase"
			},
			{
				"name":"KPNJ2_00596 GTP-binding protein CgtA (probably involved in DNA repair)\tK03979 obgE; GTPase [EC:3.6.5.-]"
			}
			]
		}
		]
	},
	{
		"name":"Prokaryotic type",
		"children":[
		{
			"name":"Sno RNPs",
			"children":[
			{
				"name":"Box C\/D snoRNPs"
			},
			{
				"name":"Box H\/ACA snoRNPs"
			}
			]
		},
		{
			"name":"rRNA transcription factors",
			"children":[
			{
				"name":"KPNJ2_04532 DnaK suppressor protein\tK06204 dksA; RNA polymerase-binding transcription factor"
			},
			{
				"name":"KPNJ2_00612 N utilization substance protein A\tK02600 nusA; transcription termination\/antitermination protein NusA"
			},
			{
				"name":"KPNJ2_04277 N utilization substance protein B\tK03625 nusB; transcription antitermination protein NusB"
			},
			{
				"name":"KPNJ2_00417 Transcription antitermination protein nusG\tK02601 nusG; transcription termination\/antitermination protein NusG"
			}
			]
		},
		{
			"name":"rRNA modification factors",
			"children":[
			{
				"name":"16S rRNA modification factors",
				"children":[
				{
					"name":"KPNJ2_01704 16S rRNA pseudouridine(516) synthase\tK06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]"
				},
				{
					"name":"KPNJ2_04645 Dimethyladenosine transferase\tK02528 ksgA; 16S rRNA (adenine1518-N6\/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]"
				},
				{
					"name":"KPNJ2_00490 16S rRNA m(5)C 967 methyltransferase\tK03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]"
				},
				{
					"name":"KPNJ2_04727 16S rRNA m(2)G 1207 methyltransferase\tK00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]"
				},
				{
					"name":"KPNJ2_00297 16S rRNA (guanine(966)-N(2))-methyltransferase\tK08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]"
				},
				{
					"name":"KPNJ2_00884 16S rRNA (uracil(1498)-N(3))-methyltransferase\tK09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]"
				},
				{
					"name":"KPNJ2_02033 16S rRNA (cytosine(1407)-C(5))-methyltransferase\tK11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]"
				},
				{
					"name":"KPNJ2_05418 16S rRNA (guanine(527)-N(7))-methyltransferase\tK03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]"
				},
				{
					"name":"KPNJ2_04602 16S rRNA (cytosine(1402)-N(4))-methyltransferase\tK03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]"
				},
				{
					"name":"KPNJ2_00636 16S rRNA (cytidine(1402)-2'-O)-methyltransferase\tK07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]"
				},
				{
					"name":"KPNJ2_00266 SAM-dependent methyltransferase\tK15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]"
				}
				]
			},
			{
				"name":"23S rRNA modification factors",
				"children":[
				{
					"name":"KPNJ2_02051 23S rRNA m(1)G 745 methyltransferase\tK00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]"
				},
				{
					"name":"KPNJ2_04997 23S rRNA Gm2251 methyltransferase\tK03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]"
				},
				{
					"name":"KPNJ2_00601 23S rRNA Um2552 2'-O-methyltransferase\tK02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]"
				},
				{
					"name":"KPNJ2_03733 23S rRNA (adenine(1618)-N(6))-methyltransferase\tK06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]"
				},
				{
					"name":"KPNJ2_00690 23S rRNA (guanine(1835)-N(2))-methyltransferase\tK11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]"
				},
				{
					"name":"KPNJ2_03900 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase\tK00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]"
				},
				{
					"name":"KPNJ2_03518 23S rRNA (cytosine(1962)-C(5))-methyltransferase\tK06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]"
				},
				{
					"name":"KPNJ2_00262 hypothetical protein\tK07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]"
				},
				{
					"name":"KPNJ2_03537 23S rRNA (guanine(2445)-N(2))-methyltransferase\tK12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase \/ 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]"
				},
				{
					"name":"KPNJ2_01103 23S rRNA (cytidine(2498)-2'-O)-methyltransferase\tK06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]"
				},
				{
					"name":"KPNJ2_01458 23S rRNA (adenine(2503)-C(2))-methyltransferase\tK06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]"
				},
				{
					"name":"KPNJ2_01142 23S rRNA m(5)U 1939 methyltransferase\tK03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]"
				},
				{
					"name":"KPNJ2_03624 23S rRNA m(5)U 747 methyltransferase\tK03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]"
				},
				{
					"name":"KPNJ2_02116 TRNA pseudouridine(32) synthase\tK06177 rluA; tRNA pseudouridine32 synthase \/ 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]"
				},
				{
					"name":"KPNJ2_04636 TRNA pseudouridine(32) synthase\tK06177 rluA; tRNA pseudouridine32 synthase \/ 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]"
				},
				{
					"name":"KPNJ2_03230 hypothetical protein\tK06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]"
				},
				{
					"name":"KPNJ2_03433 23S rRNA pseudouridine(955\/2504\/2580) synthase\tK06179 rluC; 23S rRNA pseudouridine955\/2504\/2580 synthase [EC:5.4.99.24]"
				},
				{
					"name":"KPNJ2_01388 23S rRNA pseudouridine(1911\/1915\/1917) synthase\tK06180 rluD; 23S rRNA pseudouridine1911\/1915\/1917 synthase [EC:5.4.99.23]"
				},
				{
					"name":"KPNJ2_03380 Ribosomal large subunit pseudouridine synthase E\tK06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]"
				},
				{
					"name":"KPNJ2_05182 16S rRNA pseudouridine(516) synthase\tK06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]"
				},
				{
					"name":"KPNJ2_01398 23S rRNA Gm2251 methyltransferase\tK03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]"
				}
				]
			}
			]
		},
		{
			"name":"ribosomal protein modification factors",
			"children":[
			{
				"name":"KPNJ2_04725 Ribosomal-protein-S18-alanine acetyltransferase\tK03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase \/ [ribosomal protein L31]-L-lysine N-acetyltransferase [EC:2.3.1.266 2.3.1.338]"
			},
			{
				"name":"KPNJ2_03440 Ribosomal-protein-S5-alanine acetyltransferase\tK03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]"
			},
			{
				"name":"KPNJ2_03631 Ribosomal protein S6 modification protein\tK05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]"
			},
			{
				"name":"KPNJ2_02485 Ribosomal-protein-serine acetyltransferase\tK03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]"
			},
			{
				"name":"KPNJ2_01373 16S rRNA processing protein rimM\tK02860 rimM; 16S rRNA processing protein RimM"
			},
			{
				"name":"KPNJ2_03698 TRNA 2-methylthioadenosine synthase -like protein\tK14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]"
			},
			{
				"name":"KPNJ2_03578 Fatty acid binding protein YcaO\tK09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor"
			},
			{
				"name":"KPNJ2_00529 Ribosomal protein L11 methyltransferase\tK02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]"
			},
			{
				"name":"KPNJ2_01587 Ribosomal protein L3P methyltransferase\tK07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]"
			},
			{
				"name":"KPNJ2_03389 Putative cytosolic protein\tK18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]"
			},
			{
				"name":"KPNJ2_04821 Putative cytosolic protein\tK18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]"
			}
			]
		},
		{
			"name":"rRNA processing factors",
			"children":[
			{
				"name":"KPNJ2_01412 Ribonuclease III\tK03685 rnc; ribonuclease III [EC:3.1.26.3]"
			},
			{
				"name":"KPNJ2_03434 Ribonuclease E\tK08300 rne; ribonuclease E [EC:3.1.26.12]"
			},
			{
				"name":"KPNJ2_00543 Ribonuclease G\tK08301 rng; ribonuclease G [EC:3.1.26.-]"
			},
			{
				"name":"KPNJ2_00881 Putative cytosolic protein\tK07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]"
			}
			]
		},
		{
			"name":"rRNA helicases",
			"children":[
			{
				"name":"KPNJ2_03051 ATP-dependent RNA helicase dbpA\tK05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]"
			},
			{
				"name":"KPNJ2_00620 ATP-dependent RNA helicase dbpA\tK05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]"
			},
			{
				"name":"KPNJ2_01401 ATP-dependent RNA helicase srmB\tK05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]"
			}
			]
		},
		{
			"name":"GTPases",
			"children":[
			{
				"name":"KPNJ2_01413 GTP-binding protein era\tK03595 era; GTPase"
			},
			{
				"name":"KPNJ2_05017 GTPase\tK06949 rsgA; ribosome biogenesis GTPase \/ thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]"
			},
			{
				"name":"KPNJ2_01465 GTP-binding protein\tK03977 engA; GTPase"
			},
			{
				"name":"KPNJ2_00596 GTP-binding protein CgtA (probably involved in DNA repair)\tK03979 obgE; GTPase [EC:3.6.5.-]"
			},
			{
				"name":"KPNJ2_05006 GTP-binding protein hflX\tK03665 hflX; GTPase"
			}
			]
		},
		{
			"name":"Other maturation factors",
			"children":[
			{
				"name":"KPNJ2_00496 Sua5\/YciO\/YrdC\/YwlC family protein\tK07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]"
			},
			{
				"name":"KPNJ2_00117 GTP pyrophosphokinase\tK01139 spoT; GTP diphosphokinase \/ guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]"
			},
			{
				"name":"KPNJ2_00614 Ribosome-binding factor A\tK02834 rbfA; ribosome-binding factor A"
			},
			{
				"name":"KPNJ2_00611 Putative cytosolic protein\tK09748 rimP; ribosome maturation factor RimP"
			},
			{
				"name":"KPNJ2_04155 Urease\tK14761 rlbA; ribosome-associated protein"
			},
			{
				"name":"KPNJ2_03899 Iojap protein family protein\tK09710 ybeB; ribosome-associated protein"
			},
			{
				"name":"KPNJ2_03879 Putative metal-binding protein\tK07042 ybeY; probable rRNA maturation factor"
			},
			{
				"name":"KPNJ2_00600 Putative RNA binding protein\tK07574 yhbY; RNA-binding protein"
			},
			{
				"name":"KPNJ2_00172 Hypothetical protein\tK14762 yibL; ribosome-associated protein"
			},
			{
				"name":"KPNJ2_04942 Hypothetical protein\tK09889 yjgA; ribosome-associated protein"
			},
			{
				"name":"KPNJ2_03532 Ribosome modulation factor\tK03812 rmf; ribosome modulation factor"
			},
			{
				"name":"KPNJ2_00576 Ribosome-associated factor Y\tK05808 hpf; ribosome hibernation promoting factor"
			},
			{
				"name":"KPNJ2_01386 Ribosome-associated factor Y\tK05809 raiA; ribosome-associated inhibitor A"
			},
			{
				"name":"KPNJ2_02588 SSU ribosomal protein S22P\tK02972 sra; stationary-phase-induced ribosome-associated protein"
			},
			{
				"name":"KPNJ2_02159 Putative GTP-binding protein\tK06942 ychF; ribosome-binding ATPase"
			},
			{
				"name":"KPNJ2_03431 Hypothetical protein\tK07040 yceD; DUF177 domain-containing protein"
			}
			]
		}
		]
	},
	{
		"name":"Related small nucleolar RNAs",
		"children":[
		{
			"name":"Box C\/D snoRNAs",
			"children":[
			{
				"name":"SnoRNAs involved in processing reactions"
			},
			{
				"name":"SnoRNAs act as guides for 2'-O-ribose methylation"
			}
			]
		},
		{
			"name":"Box H\/ACA snoRNAs",
			"children":[
			{
				"name":"SnoRNAs involved in processing reactions"
			},
			{
				"name":"SnoRNAs act as guides for pseudouridynation"
			}
			]
		},
		{
			"name":"Other snoRNA"
		}
		]
	}
	]
}