{
	"name":"pcm01002",
	"children":[
	{
		"name":"Aspartic peptidases",
		"children":[
		{
			"name":"Family A1: pepsin family"
		},
		{
			"name":"Family A2: retropepsin family"
		},
		{
			"name":"Family A5: thermopsin family"
		},
		{
			"name":"Family A8: signal peptidase II family",
			"children":[
			{
				"name":"AY601_2407 Lipoprotein signal peptidase\tK03101 lspA; signal peptidase II [EC:3.4.23.36]"
			},
			{
				"name":"AY601_3764 Lipoprotein signal peptidase\tK03101 lspA; signal peptidase II [EC:3.4.23.36]"
			}
			]
		},
		{
			"name":"Family A22: presenilin family"
		},
		{
			"name":"Family A24: type IV prepilin peptidase family"
		},
		{
			"name":"Family A25: gpr protease family"
		},
		{
			"name":"Family A26: omptin family"
		},
		{
			"name":"Family A28"
		},
		{
			"name":"Family A31: HybD endopeptidase family"
		},
		{
			"name":"Family A36"
		}
		]
	},
	{
		"name":"Cysteine peptidases",
		"children":[
		{
			"name":"Family C1: papain family",
			"children":[
			{
				"name":"AY601_0831 Aminopeptidase\tK01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]"
			}
			]
		},
		{
			"name":"Family C2: calpain family"
		},
		{
			"name":"Family C3: picornain family"
		},
		{
			"name":"Family C4: NIa protease family"
		},
		{
			"name":"Family C5"
		},
		{
			"name":"Family C9"
		},
		{
			"name":"Family C10: streptopain family"
		},
		{
			"name":"Family C11: clostripain family"
		},
		{
			"name":"Family C12: ubiquitin C-terminal hydrolase family"
		},
		{
			"name":"Family C13: legumain family"
		},
		{
			"name":"Family C14: caspase family"
		},
		{
			"name":"Family C15: pyroglutamyl peptidase I family"
		},
		{
			"name":"Family C16"
		},
		{
			"name":"Family C19: ubiquitin-specific protease family"
		},
		{
			"name":"Family C25: gingipain family"
		},
		{
			"name":"Family C26: gamma-glutamyl hydrolase family",
			"children":[
			{
				"name":"AY601_3357 GMP synthase\tK01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]"
			},
			{
				"name":"AY601_1436 Peptidase C26\tK07010 K07010; putative glutamine amidotransferase"
			}
			]
		},
		{
			"name":"Family C27"
		},
		{
			"name":"Family C30"
		},
		{
			"name":"Family C37"
		},
		{
			"name":"Family C39",
			"children":[
			{
				"name":"AY601_3535 hypothetical protein\tK20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter"
			}
			]
		},
		{
			"name":"Family C40",
			"children":[
			{
				"name":"AY601_0377 Peptidoglycan-binding protein\tK19223 lytF; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]"
			},
			{
				"name":"AY601_3948 Glycoside hydrolase\tK13694 mepS; murein DD-endopeptidase \/ murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]"
			},
			{
				"name":"AY601_0118 Hydrolase\tK20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]"
			},
			{
				"name":"AY601_1704 hydrolase\tK13695 nlpC; probable lipoprotein NlpC"
			}
			]
		},
		{
			"name":"Family C44",
			"children":[
			{
				"name":"AY601_3361 Amidophosphoribosyltransferase\tK00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]"
			},
			{
				"name":"AY601_1392 Glutamate synthase\tK00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]"
			},
			{
				"name":"AY601_4575 Glutamine--fructose-6-phosphate aminotransferase\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]"
			}
			]
		},
		{
			"name":"Family C45"
		},
		{
			"name":"Family C46: hedgehog family"
		},
		{
			"name":"Family C47: staphopain family"
		},
		{
			"name":"Family C48: Ulp1 endopeptidase family"
		},
		{
			"name":"Family C50: separase family"
		},
		{
			"name":"Family C54: Aut2 peptidase family"
		},
		{
			"name":"Family C55: YopJ protease family"
		},
		{
			"name":"Family C56: PfpI endopeptidase family",
			"children":[
			{
				"name":"AY601_1133 Glutamine amidotransferase\tK05520 yhbO; deglycase [EC:3.5.1.124]"
			}
			]
		},
		{
			"name":"Family C57: vaccinia virus I7 peptidase family"
		},
		{
			"name":"Family C58"
		},
		{
			"name":"Family C59"
		},
		{
			"name":"Family C60"
		},
		{
			"name":"Family C63"
		},
		{
			"name":"Family C64"
		},
		{
			"name":"Family C65"
		},
		{
			"name":"Family C67"
		},
		{
			"name":"Family C69"
		},
		{
			"name":"Family C70"
		},
		{
			"name":"Family C75"
		},
		{
			"name":"Family C76"
		},
		{
			"name":"Family C78"
		},
		{
			"name":"Family C79"
		},
		{
			"name":"Family C82",
			"children":[
			{
				"name":"AY601_0128 hypothetical protein\tK21470 ldtD; L,D-transpeptidase"
			},
			{
				"name":"AY601_0593 hypothetical protein\tK21470 ldtD; L,D-transpeptidase"
			},
			{
				"name":"AY601_1978 hypothetical protein\tK21470 ldtD; L,D-transpeptidase"
			},
			{
				"name":"AY601_2404 Cell wall degradation protein\tK21470 ldtD; L,D-transpeptidase"
			},
			{
				"name":"AY601_2685 membrane protein\tK28919 dpaA; peptidoglycan meso-diaminopimelic acid protein amidase A [EC:3.4.-.-]"
			}
			]
		},
		{
			"name":"Family C83"
		},
		{
			"name":"Family C85"
		},
		{
			"name":"Family C86"
		},
		{
			"name":"Family C88"
		},
		{
			"name":"Family C89"
		},
		{
			"name":"Family C97"
		},
		{
			"name":"Family C98"
		},
		{
			"name":"Family C110"
		}
		]
	},
	{
		"name":"Glutamic peptidases",
		"children":[
		{
			"name":"Family G1"
		},
		{
			"name":"Family G4"
		},
		{
			"name":"Family G5: prenyl protease 2 family",
			"children":[
			{
				"name":"AY601_0586 CAAX protease\tK07052 K07052; CAAX protease family protein"
			},
			{
				"name":"AY601_4205 peptidase\tK07052 K07052; CAAX protease family protein"
			}
			]
		}
		]
	},
	{
		"name":"Metallo peptidases",
		"children":[
		{
			"name":"Family M1",
			"children":[
			{
				"name":"AY601_0756 Peptidase M1\tK01256 pepN; aminopeptidase N [EC:3.4.11.2]"
			},
			{
				"name":"AY601_0833 Peptidase M1\tK01256 pepN; aminopeptidase N [EC:3.4.11.2]"
			}
			]
		},
		{
			"name":"Family M2"
		},
		{
			"name":"Family M3",
			"children":[
			{
				"name":"AY601_2441 Dipeptidyl carboxypeptidase Dcp\tK01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]"
			},
			{
				"name":"AY601_3381 Oligoendopeptidase F\tK08602 pepF; oligoendopeptidase F [EC:3.4.24.-]"
			}
			]
		},
		{
			"name":"Family M4: thermolysin family"
		},
		{
			"name":"Family M5: mycolysin family"
		},
		{
			"name":"Family M6: immune inhibitor A family"
		},
		{
			"name":"Family M7: snapalysin family"
		},
		{
			"name":"Family M8: leishmanolysin family"
		},
		{
			"name":"Family M9"
		},
		{
			"name":"Family M10"
		},
		{
			"name":"Family M12: astacin\/adamalysin family"
		},
		{
			"name":"Family M13: neprilysin family",
			"children":[
			{
				"name":"AY601_0321 peptidase M13\tK07386 pepO; putative endopeptidase [EC:3.4.24.-]"
			},
			{
				"name":"AY601_2357 Peptidase M13\tK07386 pepO; putative endopeptidase [EC:3.4.24.-]"
			},
			{
				"name":"AY601_3252 Peptidase M13\tK07386 pepO; putative endopeptidase [EC:3.4.24.-]"
			}
			]
		},
		{
			"name":"Family M14: carboxypeptidase A family"
		},
		{
			"name":"Family M15: zinc D-Ala-D-Ala carboxypeptidase family",
			"children":[
			{
				"name":"AY601_1867 D-alanyl-D-alanine dipeptidase\tK08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]"
			}
			]
		},
		{
			"name":"Family M16: pitrilysin family",
			"children":[
			{
				"name":"AY601_1921 hypothetical protein\tK07263 pqqL; zinc protease [EC:3.4.24.-]"
			},
			{
				"name":"AY601_1922 peptidase M16\tK07263 pqqL; zinc protease [EC:3.4.24.-]"
			},
			{
				"name":"AY601_2533 Peptidase M16\tK07263 pqqL; zinc protease [EC:3.4.24.-]"
			},
			{
				"name":"AY601_4386 Peptidase M16\tK07263 pqqL; zinc protease [EC:3.4.24.-]"
			}
			]
		},
		{
			"name":"Family M17: leucyl aminopeptidase family"
		},
		{
			"name":"Family M18"
		},
		{
			"name":"Family M19: membrane dipeptidase family",
			"children":[
			{
				"name":"AY601_3473 Peptidase M19\tK01273 DPEP; membrane dipeptidase [EC:3.4.13.19]"
			}
			]
		},
		{
			"name":"Family M20",
			"children":[
			{
				"name":"AY601_4023 Peptidase T\tK01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]"
			},
			{
				"name":"AY601_2401 Aminoacyl-histidine dipeptidase\tK01270 pepD; dipeptidase D [EC:3.4.13.-]"
			}
			]
		},
		{
			"name":"Family M23",
			"children":[
			{
				"name":"AY601_4358 peptidase M23\tK21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]"
			}
			]
		},
		{
			"name":"Family M24",
			"children":[
			{
				"name":"AY601_1359 methionine aminopeptidase\tK01265 map; methionyl aminopeptidase [EC:3.4.11.18]"
			},
			{
				"name":"AY601_3600 Methionine aminopeptidase\tK01265 map; methionyl aminopeptidase [EC:3.4.11.18]"
			},
			{
				"name":"AY601_5063 Methionine aminopeptidase\tK01265 map; methionyl aminopeptidase [EC:3.4.11.18]"
			},
			{
				"name":"AY601_3754 Xaa-Pro aminopeptidase\tK01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]"
			},
			{
				"name":"AY601_3969 X-Pro aminopeptidase\tK01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]"
			},
			{
				"name":"AY601_4515 Xaa-Pro aminopeptidase\tK01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]"
			}
			]
		},
		{
			"name":"Family M26"
		},
		{
			"name":"Family M27"
		},
		{
			"name":"Family M28: aminopeptidase Y family"
		},
		{
			"name":"Family M29: aminopeptidase T family"
		},
		{
			"name":"Family M32: carboxypeptidase Taq family"
		},
		{
			"name":"Family M34: anthrax lethal factor family"
		},
		{
			"name":"Family M35: deuterolysin family"
		},
		{
			"name":"Family M36: fungalysin family"
		},
		{
			"name":"Family M38: beta-aspartyl dipeptidase family"
		},
		{
			"name":"Family M41: FtsH endopeptidase family",
			"children":[
			{
				"name":"AY601_4183 Peptidase M41\tK08956 AFG3; AFG3 family protein [EC:3.4.24.-]"
			}
			]
		},
		{
			"name":"Family M42: glutamyl aminopeptidase family"
		},
		{
			"name":"Family M43: cytophagalysin family"
		},
		{
			"name":"Family M44"
		},
		{
			"name":"Family M48: Ste24 endopeptidase family"
		},
		{
			"name":"Family M49: dipeptidyl-peptidase III family"
		},
		{
			"name":"Family M50: S2P protease family",
			"children":[
			{
				"name":"AY601_0138 Peptidase\tK11749 rseP; regulator of sigma E protease [EC:3.4.24.-]"
			}
			]
		},
		{
			"name":"Family M54"
		},
		{
			"name":"Family M55: DppA aminopeptidase family"
		},
		{
			"name":"Family M56",
			"children":[
			{
				"name":"AY601_2844 Peptidase M56 BlaR1\tK02172 blaR1; bla regulator protein blaR1"
			},
			{
				"name":"AY601_3322 Peptidase M56\tK02172 blaR1; bla regulator protein blaR1"
			},
			{
				"name":"AY601_3908 TonB family protein\tK02172 blaR1; bla regulator protein blaR1"
			}
			]
		},
		{
			"name":"Family M67"
		},
		{
			"name":"Family M72"
		},
		{
			"name":"Family M73"
		},
		{
			"name":"Family M74"
		},
		{
			"name":"Family M80"
		},
		{
			"name":"Family M82"
		},
		{
			"name":"Family M85"
		},
		{
			"name":"Family M88"
		},
		{
			"name":"Family M90",
			"children":[
			{
				"name":"AY601_3935 Phenylalanyl-tRNA synthetase alpha subunit\tK09933 mtfA; MtfA peptidase"
			}
			]
		},
		{
			"name":"Family M98"
		}
		]
	},
	{
		"name":"Asparagine peptide lyases",
		"children":[
		{
			"name":"Family N1"
		},
		{
			"name":"Family N8"
		}
		]
	},
	{
		"name":"Mixed peptidases",
		"children":[
		{
			"name":"Family P1: DmpA aminopeptidase family"
		},
		{
			"name":"Family P2"
		}
		]
	},
	{
		"name":"Serine peptidases",
		"children":[
		{
			"name":"Family S1: chymotrypsin family",
			"children":[
			{
				"name":"AY601_2609 serine protease DO-like protein\tK04771 degP; serine protease Do [EC:3.4.21.107]"
			},
			{
				"name":"AY601_3912 Serine protease\tK04771 degP; serine protease Do [EC:3.4.21.107]"
			}
			]
		},
		{
			"name":"Family S3: togavirin family"
		},
		{
			"name":"Family S6"
		},
		{
			"name":"Family S7: flavivirin family"
		},
		{
			"name":"Family S8: subtilisin family",
			"children":[
			{
				"name":"AY601_4664 Peptidase S8\tK13274 wprA; cell wall-associated protease [EC:3.4.21.-]"
			},
			{
				"name":"AY601_1489 Peptidase S8\tK13277 epr; minor extracellular protease Epr [EC:3.4.21.-]"
			}
			]
		},
		{
			"name":"Family S9: prolyl oligopeptidase family",
			"children":[
			{
				"name":"AY601_0660 Peptidase S9\tK01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]"
			},
			{
				"name":"AY601_3251 Peptidase S9\tK01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]"
			},
			{
				"name":"AY601_3875 Peptidase S9\tK01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]"
			},
			{
				"name":"AY601_4160 Oligopeptidase\tK01354 ptrB; oligopeptidase B [EC:3.4.21.83]"
			}
			]
		},
		{
			"name":"Family S10"
		},
		{
			"name":"Family S11: D-Ala-D-Ala carboxypeptidase A family"
		},
		{
			"name":"Family S12: D-Ala-D-Ala carboxypeptidase B family"
		},
		{
			"name":"Family S13: D-Ala-D-Ala peptidase C family",
			"children":[
			{
				"name":"AY601_4223 Peptidase S13\tK07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase\/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]"
			},
			{
				"name":"AY601_4778 D-alanyl-D-alanine carboxypeptidase\tK07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase\/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]"
			}
			]
		},
		{
			"name":"Family S14: ClpP endopeptidase family",
			"children":[
			{
				"name":"AY601_0240 ATP-dependent Clp protease proteolytic subunit\tK01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]"
			}
			]
		},
		{
			"name":"Family S15"
		},
		{
			"name":"Family S16: lon protease family",
			"children":[
			{
				"name":"AY601_3294 Lon protease\tK01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]"
			}
			]
		},
		{
			"name":"Family S21: assemblin family"
		},
		{
			"name":"Family S24: LexA family"
		},
		{
			"name":"Family S26: signal peptidase I family",
			"children":[
			{
				"name":"AY601_1116 Signal peptidase I\tK03100 lepB; signal peptidase I [EC:3.4.21.89]"
			},
			{
				"name":"AY601_1874 Signal peptidase I\tK03100 lepB; signal peptidase I [EC:3.4.21.89]"
			},
			{
				"name":"AY601_4868 Signal peptidase\tK03100 lepB; signal peptidase I [EC:3.4.21.89]"
			}
			]
		},
		{
			"name":"Family S28"
		},
		{
			"name":"Family S31"
		},
		{
			"name":"Family S32"
		},
		{
			"name":"Family S33",
			"children":[
			{
				"name":"AY601_4309 Alpha\/beta hydrolase fold containing protein\tK01259 pip; proline iminopeptidase [EC:3.4.11.5]"
			}
			]
		},
		{
			"name":"Family S41: C-terminal processing peptidase family",
			"children":[
			{
				"name":"AY601_2444 Peptidase S41\tK03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]"
			},
			{
				"name":"AY601_2809 Carboxy-terminal processing protease\tK03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]"
			},
			{
				"name":"AY601_3952 Peptidase S41\tK03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]"
			},
			{
				"name":"AY601_4391 Carboxyl-terminal protease\tK03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]"
			},
			{
				"name":"AY601_4642 Peptidase S41\tK03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]"
			}
			]
		},
		{
			"name":"Family S45",
			"children":[
			{
				"name":"AY601_0043 Penicillin acylase\tK01434 pac; penicillin G amidase [EC:3.5.1.11]"
			},
			{
				"name":"AY601_2847 penicillin amidase\tK01434 pac; penicillin G amidase [EC:3.5.1.11]"
			}
			]
		},
		{
			"name":"Family S49: protease IV family",
			"children":[
			{
				"name":"AY601_0252 Protease IV\tK04773 sppA; protease IV [EC:3.4.21.-]"
			}
			]
		},
		{
			"name":"Family S50"
		},
		{
			"name":"Family S51",
			"children":[
			{
				"name":"AY601_0700 Cyanophycinase\tK13282 cphB; cyanophycinase [EC:3.4.15.6]"
			},
			{
				"name":"AY601_3956 Cyanophycinase\tK13282 cphB; cyanophycinase [EC:3.4.15.6]"
			}
			]
		},
		{
			"name":"Family S53"
		},
		{
			"name":"Family S54: Rhomboid family",
			"children":[
			{
				"name":"AY601_3706 Rhomboid family protein\tK07059 rho2; rhomboid family protease [EC:3.4.21.105]"
			},
			{
				"name":"AY601_3707 Transmembrane rhomboid family protein\tK07059 rho2; rhomboid family protease [EC:3.4.21.105]"
			}
			]
		},
		{
			"name":"Family S55: SpoIVB peptidase family"
		},
		{
			"name":"Family S62"
		},
		{
			"name":"Family S66",
			"children":[
			{
				"name":"AY601_0419 Peptidase U61\tK01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]"
			},
			{
				"name":"AY601_4130 peptidase S66\tK01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]"
			}
			]
		},
		{
			"name":"Family S77: phage prohead processing peptidase family"
		},
		{
			"name":"Family S78"
		}
		]
	},
	{
		"name":"Threonine peptidases",
		"children":[
		{
			"name":"Family T1: proteasome family"
		},
		{
			"name":"Family T2",
			"children":[
			{
				"name":"AY601_0699 Asparaginase family protein\tK13051 ASRGL1; L-asparaginase \/ beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]"
			},
			{
				"name":"AY601_3955 asparaginase\tK13051 ASRGL1; L-asparaginase \/ beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]"
			}
			]
		},
		{
			"name":"Family T3: gamma-glutamyltransferase family",
			"children":[
			{
				"name":"AY601_0985 Gamma-glutamyltranspeptidase\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]"
			},
			{
				"name":"AY601_3566 Gamma-glutamyltranspeptidase\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]"
			}
			]
		}
		]
	},
	{
		"name":"Peptidases of unknown catalytic type",
		"children":[
		{
			"name":"Family U32"
		},
		{
			"name":"Family U62"
		}
		]
	},
	{
		"name":"Peptidase inhibitors",
		"children":[
		{
			"name":"Family I1: Kazal family"
		},
		{
			"name":"Family I2: Kunitz - BPTI family"
		},
		{
			"name":"Family I4: serpin family"
		},
		{
			"name":"Family I11: ecotin family"
		},
		{
			"name":"Family I17: WAP-type family"
		},
		{
			"name":"Family I25: cystatin family"
		},
		{
			"name":"Family I27: calpastatin family"
		},
		{
			"name":"Family I32: IAP family"
		},
		{
			"name":"Family I34: IA3 family"
		},
		{
			"name":"Family I35: timp family"
		},
		{
			"name":"Family I39: alpha2M family",
			"children":[
			{
				"name":"AY601_1320 Alpha-2-macroglobulin domain protein\tK06894 yfhM; alpha-2-macroglobulin"
			}
			]
		},
		{
			"name":"Family I47: latexin family"
		},
		{
			"name":"Family I49: proSAAS family"
		},
		{
			"name":"Family I51: IC family"
		},
		{
			"name":"Family I57: staphostatin B family"
		},
		{
			"name":"Family I63"
		},
		{
			"name":"Family I80"
		},
		{
			"name":"Family I87"
		},
		{
			"name":"Family I93"
		}
		]
	}
	]
}