{
	"name":"phyg03000",
	"children":[
	{
		"name":"Eukaryotic type",
		"children":[
		{
			"name":"Basic leucine zipper (bZIP)",
			"children":[
			{
				"name":"AP-1(-like) components, Jun"
			},
			{
				"name":"AP-1(-like) components, Fos"
			},
			{
				"name":"AP-1(-like) components, Maf"
			},
			{
				"name":"AP-1(-like) components, NF-E2"
			},
			{
				"name":"AP-1(-like) components, Fungal regulators"
			},
			{
				"name":"AP-1(-like) components, CRE-BP\/ATF"
			},
			{
				"name":"CREB"
			},
			{
				"name":"C\/EBP-like factors"
			},
			{
				"name":"bZIP\/PAR"
			},
			{
				"name":"Plant bZIP factors"
			},
			{
				"name":"ZIP only"
			}
			]
		},
		{
			"name":"Basic helix-loop-helix (bHLH)",
			"children":[
			{
				"name":"Ubiquitous (class A) factors"
			},
			{
				"name":"Myogenic transcription factors"
			},
			{
				"name":"Achaete-Scute"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, Lymphoid factors"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, Mesodermal Twist-like factors"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, HEN"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, Mesp"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, Atonal"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, Pancreatic factors"
			},
			{
				"name":"Hairy, Hairy\/E(SPL)"
			},
			{
				"name":"Hairy, Fungal regulators"
			},
			{
				"name":"Factors with PAS domain"
			},
			{
				"name":"Yabby"
			},
			{
				"name":"INO"
			},
			{
				"name":"HLH domain only"
			}
			]
		},
		{
			"name":"Basic helix-loop-helix\/leucine zipper (bHLH-ZIP)",
			"children":[
			{
				"name":"Ubiquitous bHLH-ZIP factors"
			},
			{
				"name":"Cell cycle controlling factors, Myc"
			},
			{
				"name":"Cell cycle controlling factors, Mad\/Max"
			},
			{
				"name":"Other bHLH-ZIP factors"
			}
			]
		},
		{
			"name":"Other basic domains",
			"children":[
			{
				"name":"NF-1"
			},
			{
				"name":"RF-X"
			},
			{
				"name":"AP-2 (bHSH)"
			}
			]
		},
		{
			"name":"Zinc finger",
			"children":[
			{
				"name":"Cys4 thyroid hormone receptor-like"
			},
			{
				"name":"Cys4 hepatocyte nuclear factor 4-like"
			},
			{
				"name":"Cys4 estrogen receptor-like"
			},
			{
				"name":"Cys4 nerve growth factor IB-like"
			},
			{
				"name":"Cys4 Fushi tarazu-F1-like"
			},
			{
				"name":"Cys4 germ cell nuclear factor"
			},
			{
				"name":"Cys4 Knirps\/DAX1-like"
			},
			{
				"name":"Cys4 GATA-factors"
			},
			{
				"name":"Cys2His2 SP\/KLF family and related proteins"
			},
			{
				"name":"Cys2His2 GLI-like"
			},
			{
				"name":"Cys2His2 Snail"
			},
			{
				"name":"Cys2His2 BTB-ZF factors"
			},
			{
				"name":"Cys2His2 BED"
			},
			{
				"name":"Cys2His2 PRDM"
			},
			{
				"name":"Cys2His2 metabolic regulators in fungi"
			},
			{
				"name":"Cys2His2 others"
			},
			{
				"name":"Cys2HisCys zinc factors"
			},
			{
				"name":"Cys3His zinc factors"
			},
			{
				"name":"Cys2CysHis zinc factors"
			},
			{
				"name":"CXXC CpG-binding proteins",
				"children":[
				{
					"name":"JTY93_10925 DNA cytosine methyltransferase\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]"
				}
				]
			},
			{
				"name":"Cys6 metabolic regulators in fungi"
			},
			{
				"name":"Other zinc fingers"
			}
			]
		},
		{
			"name":"Helix-turn-helix",
			"children":[
			{
				"name":"Homeo domain ANTP: HOXL"
			},
			{
				"name":"Homeo domain ANTP: NKL"
			},
			{
				"name":"Homeo domain Paired-related"
			},
			{
				"name":"Homeo domain LIM"
			},
			{
				"name":"Homeo domain POU"
			},
			{
				"name":"Homeo domain SINE"
			},
			{
				"name":"Homeo domain ZF"
			},
			{
				"name":"Homeo domain CUT"
			},
			{
				"name":"Homeo domain PROS"
			},
			{
				"name":"Homeo domain TALE"
			},
			{
				"name":"Homeo domain other"
			},
			{
				"name":"Fork head\/winged helix developmental regulators"
			},
			{
				"name":"Fork head\/winged helix tissue-specific regulators"
			},
			{
				"name":"Fork head\/winged helix cell cycle-controlling factors, E2F"
			},
			{
				"name":"Fork head\/winged helix cell cycle-controlling factors, DP"
			},
			{
				"name":"Fork head\/winged helix other regulators"
			},
			{
				"name":"Stork head\/winged helix factors"
			},
			{
				"name":"Heat shock factors"
			},
			{
				"name":"Tryptophan clusters Myb, Myb-factors"
			},
			{
				"name":"Tryptophan clusters Myb, Myb-like factors"
			},
			{
				"name":"Tryptophan clusters Ets-type"
			},
			{
				"name":"Tryptophan clusters interferon-regulating factors"
			},
			{
				"name":"TEA domain"
			},
			{
				"name":"ARID"
			}
			]
		},
		{
			"name":"beta-Scaffold factors with minor groove contacts",
			"children":[
			{
				"name":"RHR (Rel homology region) Rel\/Ankyrin"
			},
			{
				"name":"RHR (Rel homology region) Ankyrin only"
			},
			{
				"name":"RHR (Rel homology region) NF-AT"
			},
			{
				"name":"STAT"
			},
			{
				"name":"p53"
			},
			{
				"name":"MADS-box regulators of differentiation, MEF-2"
			},
			{
				"name":"MADS-box regulators of differentiation, Homeotic genes"
			},
			{
				"name":"MADS-box regulators of differentiation, Yeast regulators"
			},
			{
				"name":"MADS-box responders to external signals"
			},
			{
				"name":"SAND domain-containing proteins"
			},
			{
				"name":"TATA-binding proteins"
			},
			{
				"name":"HMG SOX"
			},
			{
				"name":"HMG TCF-1"
			},
			{
				"name":"HMG TOX"
			},
			{
				"name":"HMG2-related"
			},
			{
				"name":"UBF"
			},
			{
				"name":"Other HMG box factors"
			},
			{
				"name":"Heteromeric CCAAT factors"
			},
			{
				"name":"Grainyhead"
			},
			{
				"name":"Cold-shock domain factors, DbpA-like"
			},
			{
				"name":"Cold-shock domain factors, YB-1\/DbpB-like"
			},
			{
				"name":"Cold-shock domain factors, FRG Y2-like"
			},
			{
				"name":"Runt"
			},
			{
				"name":"MYRF"
			}
			]
		},
		{
			"name":"Other transcription factors",
			"children":[
			{
				"name":"HMGI(Y)"
			},
			{
				"name":"NUPR"
			},
			{
				"name":"Pocket domain Rb"
			},
			{
				"name":"Pocket domain CBP"
			},
			{
				"name":"T-box"
			},
			{
				"name":"DMRT"
			},
			{
				"name":"LRRFIP"
			},
			{
				"name":"TCP"
			},
			{
				"name":"AP2\/ERF"
			},
			{
				"name":"WRKY"
			},
			{
				"name":"LOB"
			},
			{
				"name":"GRAS"
			},
			{
				"name":"NAC"
			},
			{
				"name":"Copper-fist proteins fungal regulators"
			},
			{
				"name":"Others"
			}
			]
		}
		]
	},
	{
		"name":"Prokaryotic type",
		"children":[
		{
			"name":"Helix-turn-helix",
			"children":[
			{
				"name":"AraC family",
				"children":[
				{
					"name":"JTY93_17145 hpaA; 4-hydroxyphenylacetate catabolism regulatory protein HpaA\tK02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein"
				},
				{
					"name":"JTY93_11775 AraC family transcriptional regulator\tK06599 chpD; AraC family transcriptional regulator, chemosensory pili system protein ChpD"
				},
				{
					"name":"JTY93_17205 feaR; transcriptional regulator FeaR\tK14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB"
				},
				{
					"name":"JTY93_06805 helix-turn-helix domain-containing protein\tK18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA"
				},
				{
					"name":"JTY93_25945 AraC family transcriptional regulator\tK18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE"
				},
				{
					"name":"JTY93_19900 GyrI-like domain-containing protein\tK13653 K13653; AraC family transcriptional regulator"
				},
				{
					"name":"JTY93_04760 helix-turn-helix transcriptional regulator\tK07506 K07506; AraC family transcriptional regulator"
				},
				{
					"name":"JTY93_11850 ada; bifunctional DNA-binding transcriptional regulator\/O6-methylguanine-DNA methyltransferase Ada\tK10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response \/ methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]"
				},
				{
					"name":"JTY93_25120 GlxA family transcriptional regulator\tK17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator"
				},
				{
					"name":"JTY93_19710 argR; transcriptional regulator ArgR\tK21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator"
				},
				{
					"name":"JTY93_17130 GlxA family transcriptional regulator\tK21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator"
				},
				{
					"name":"JTY93_25150 GlxA family transcriptional regulator\tK21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator"
				}
				]
			},
			{
				"name":"LysR family",
				"children":[
				{
					"name":"JTY93_02550 LysR family transcriptional regulator\tK03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator"
				},
				{
					"name":"JTY93_04700 LysR family transcriptional regulator\tK03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator"
				},
				{
					"name":"JTY93_04855 LysR family transcriptional regulator\tK03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator"
				},
				{
					"name":"JTY93_10360 LysR family transcriptional regulator\tK03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator"
				},
				{
					"name":"JTY93_11740 LysR family transcriptional regulator\tK03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator"
				},
				{
					"name":"JTY93_12460 LysR family transcriptional regulator\tK03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator"
				},
				{
					"name":"JTY93_26605 LysR family transcriptional regulator\tK03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator"
				},
				{
					"name":"JTY93_21230 metR; transcriptional regulator MetR\tK03576 metR; LysR family transcriptional regulator, regulator for metE and metH"
				},
				{
					"name":"JTY93_16695 nhaR; transcriptional activator NhaR\tK03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA"
				},
				{
					"name":"JTY93_28715 nhaR; transcriptional activator NhaR\tK03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA"
				},
				{
					"name":"JTY93_26815 LysR family transcriptional regulator\tK04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator"
				},
				{
					"name":"JTY93_06835 cynR; transcriptional regulator CynR\tK11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator"
				},
				{
					"name":"JTY93_24845 LysR family transcriptional regulator\tK11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator"
				},
				{
					"name":"JTY93_09225 cysB; HTH-type transcriptional regulator CysB\tK13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator"
				},
				{
					"name":"JTY93_03460 dsdC; DNA-binding transcriptional regulator DsdC\tK13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator"
				},
				{
					"name":"JTY93_05020 LysR family transcriptional regulator\tK13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC"
				},
				{
					"name":"JTY93_25430 LysR family transcriptional regulator\tK13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator"
				},
				{
					"name":"JTY93_16615 LysR family transcriptional regulator\tK17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator"
				},
				{
					"name":"JTY93_11630 LysR family transcriptional regulator\tK17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase"
				},
				{
					"name":"JTY93_06770 LysR family transcriptional regulator\tK18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator"
				},
				{
					"name":"JTY93_14635 LysR family transcriptional regulator\tK19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein"
				},
				{
					"name":"JTY93_26950 LysR family transcriptional regulator\tK21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT"
				},
				{
					"name":"JTY93_03160 LysR family transcriptional regulator\tK21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon"
				},
				{
					"name":"JTY93_04920 LysR family transcriptional regulator\tK21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator"
				},
				{
					"name":"JTY93_27150 LysR family transcriptional regulator\tK21711 pycR; LysR family transcriptional regulator, putative pyruvate carboxylase regulator"
				},
				{
					"name":"JTY93_03310 LysR family transcriptional regulator\tK21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes"
				},
				{
					"name":"JTY93_17085 LysR family transcriptional regulator\tK23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator"
				},
				{
					"name":"JTY93_00185 LysR family transcriptional regulator\tK27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator"
				}
				]
			},
			{
				"name":"DeoR family",
				"children":[
				{
					"name":"JTY93_11675 DeoR\/GlpR transcriptional regulator\tK02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor"
				},
				{
					"name":"JTY93_21125 DeoR\/GlpR family transcriptional regulator\tK02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor"
				}
				]
			},
			{
				"name":"LacI family",
				"children":[
				{
					"name":"JTY93_10410 LacI family DNA-binding transcriptional regulator\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor"
				},
				{
					"name":"JTY93_17385 LacI family DNA-binding transcriptional regulator\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor"
				},
				{
					"name":"JTY93_13630 LacI family DNA-binding transcriptional regulator\tK02525 kdgR; LacI family transcriptional regulator, kdg operon repressor"
				},
				{
					"name":"JTY93_22515 cra; catabolite repressor\/activator\tK03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor"
				},
				{
					"name":"JTY93_19920 LacI family DNA-binding transcriptional regulator\tK06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor"
				}
				]
			},
			{
				"name":"GntR family",
				"children":[
				{
					"name":"JTY93_05235 treR; trehalose operon repressor\tK03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor"
				},
				{
					"name":"JTY93_07800 phnF; phosphonate metabolism transcriptional regulator PhnF\tK02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein"
				},
				{
					"name":"JTY93_01610 hutC; histidine utilization repressor\tK05836 hutC; GntR family transcriptional regulator, histidine utilization repressor"
				},
				{
					"name":"JTY93_05305 GntR family transcriptional regulator\tK24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator"
				},
				{
					"name":"JTY93_03550 FCD domain-containing protein\tK05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex"
				},
				{
					"name":"JTY93_03430 PLP-dependent aminotransferase family protein\tK00375 K00375; GntR family transcriptional regulator \/ MocR family aminotransferase"
				},
				{
					"name":"JTY93_27090 PLP-dependent aminotransferase family protein\tK00375 K00375; GntR family transcriptional regulator \/ MocR family aminotransferase"
				}
				]
			},
			{
				"name":"TetR\/AcrR family",
				"children":[
				{
					"name":"JTY93_25180 betI; transcriptional regulator BetI\tK02167 betI; TetR\/AcrR family transcriptional regulator, transcriptional repressor of bet genes"
				},
				{
					"name":"JTY93_06245 TetR family transcriptional regulator\tK03577 acrR; TetR\/AcrR family transcriptional regulator, acrAB operon repressor"
				},
				{
					"name":"JTY93_03150 TetR\/AcrR family transcriptional regulator\tK09017 rutR; TetR\/AcrR family transcriptional regulator"
				},
				{
					"name":"JTY93_07920 TetR\/AcrR family transcriptional regulator\tK09017 rutR; TetR\/AcrR family transcriptional regulator"
				},
				{
					"name":"JTY93_16275 TetR family transcriptional regulator C-terminal domain-containing protein\tK09017 rutR; TetR\/AcrR family transcriptional regulator"
				},
				{
					"name":"JTY93_19785 TetR\/AcrR family transcriptional regulator\tK19736 aefR; TetR\/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness"
				},
				{
					"name":"JTY93_09045 TetR\/AcrR family transcriptional regulator\tK16137 nemR; TetR\/AcrR family transcriptional regulator, transcriptional repressor for nem operon"
				},
				{
					"name":"JTY93_09670 TetR\/AcrR family transcriptional regulator\tK16137 nemR; TetR\/AcrR family transcriptional regulator, transcriptional repressor for nem operon"
				},
				{
					"name":"JTY93_12505 TetR\/AcrR family transcriptional regulator\tK16137 nemR; TetR\/AcrR family transcriptional regulator, transcriptional repressor for nem operon"
				},
				{
					"name":"JTY93_05620 TetR\/AcrR family transcriptional regulator\tK18301 mexL; TetR\/AcrR family transcriptional regulator, mexJK operon transcriptional repressor"
				},
				{
					"name":"JTY93_02630 TetR family transcriptional regulator\tK22105 fabR; TetR\/AcrR family transcriptional regulator, fatty acid biosynthesis regulator"
				},
				{
					"name":"JTY93_09510 TetR family transcriptional regulator\tK22108 kstR2; TetR\/AcrR family transcriptional regulator, cholesterol catabolism regulator"
				}
				]
			},
			{
				"name":"Lrp\/AsnC family",
				"children":[
				{
					"name":"JTY93_03330 Lrp\/AsnC family transcriptional regulator\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein"
				},
				{
					"name":"JTY93_11965 Lrp\/AsnC family transcriptional regulator\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein"
				},
				{
					"name":"JTY93_12900 Lrp\/AsnC family transcriptional regulator\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein"
				},
				{
					"name":"JTY93_16425 bkdR; Bkd operon transcriptional regulator BkdR\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein"
				},
				{
					"name":"JTY93_16490 Lrp\/AsnC family transcriptional regulator\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein"
				},
				{
					"name":"JTY93_17120 Lrp\/AsnC family transcriptional regulator\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein"
				},
				{
					"name":"JTY93_22485 Lrp\/AsnC family transcriptional regulator\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein"
				},
				{
					"name":"JTY93_23045 Lrp\/AsnC family transcriptional regulator\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein"
				},
				{
					"name":"JTY93_23095 Lrp\/AsnC family transcriptional regulator\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein"
				},
				{
					"name":"JTY93_26660 Lrp\/AsnC ligand binding domain-containing protein\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein"
				},
				{
					"name":"JTY93_10345 Lrp\/AsnC family transcriptional regulator\tK05800 decR; Lrp\/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator"
				},
				{
					"name":"JTY93_26075 Lrp\/AsnC family transcriptional regulator\tK05800 decR; Lrp\/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator"
				}
				]
			},
			{
				"name":"LuxR family",
				"children":[
				{
					"name":"JTY93_04630 helix-turn-helix transcriptional regulator\tK03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein"
				},
				{
					"name":"JTY93_21915 helix-turn-helix transcriptional regulator\tK03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein"
				}
				]
			},
			{
				"name":"MarR family",
				"children":[
				{
					"name":"JTY93_00700 winged helix DNA-binding protein\tK06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin"
				},
				{
					"name":"JTY93_07405 MarR family transcriptional regulator\tK06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin"
				},
				{
					"name":"JTY93_09255 MarR family transcriptional regulator\tK23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator"
				},
				{
					"name":"JTY93_09335 MarR family transcriptional regulator\tK23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator"
				}
				]
			},
			{
				"name":"MerR family",
				"children":[
				{
					"name":"JTY93_27590 merR; Hg(II)-responsive transcriptional regulator\tK08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein"
				},
				{
					"name":"JTY93_27830 mercury resistance transcriptional regulator MerR\tK08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein"
				},
				{
					"name":"JTY93_27565 merD; mercury resistance co-regulator MerD\tK19057 merD; MerR family transcriptional regulator, mercuric resistance operon regulatory protein"
				},
				{
					"name":"JTY93_27810 merD; mercury resistance co-regulator MerD\tK19057 merD; MerR family transcriptional regulator, mercuric resistance operon regulatory protein"
				},
				{
					"name":"JTY93_03080 cueR; Cu(I)-responsive transcriptional regulator\tK19591 cueR; MerR family transcriptional regulator, copper efflux regulator"
				},
				{
					"name":"JTY93_17780 soxR; redox-sensitive transcriptional activator SoxR\tK13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR"
				},
				{
					"name":"JTY93_04430 MerR family transcriptional regulator\tK22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator"
				},
				{
					"name":"JTY93_04565 MerR family transcriptional regulator\tK22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator"
				}
				]
			},
			{
				"name":"Fur family",
				"children":[
				{
					"name":"JTY93_03575 fur; ferric iron uptake transcriptional regulator\tK03711 fur; Fur family transcriptional regulator, ferric uptake regulator"
				},
				{
					"name":"JTY93_00370 transcriptional repressor\tK09823 zur; Fur family transcriptional regulator, zinc uptake regulator"
				}
				]
			},
			{
				"name":"IclR family",
				"children":[
				{
					"name":"JTY93_06160 pcaR; pca regulon transcriptional regulator PcaR\tK02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein"
				}
				]
			},
			{
				"name":"CRP\/FNR family",
				"children":[
				{
					"name":"JTY93_00890 Crp\/Fnr family transcriptional regulator\tK10914 crp; CRP\/FNR family transcriptional regulator, cyclic AMP receptor protein"
				},
				{
					"name":"JTY93_24230 crp; cAMP-activated global transcriptional regulator CRP\tK10914 crp; CRP\/FNR family transcriptional regulator, cyclic AMP receptor protein"
				},
				{
					"name":"JTY93_18310 fnr; fumarate\/nitrate reduction transcriptional regulator Fnr\tK01420 fnr; CRP\/FNR family transcriptional regulator, anaerobic regulatory protein"
				},
				{
					"name":"JTY93_11570 Crp\/Fnr family transcriptional regulator\tK21563 dnr; CRP\/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator"
				},
				{
					"name":"JTY93_14085 Crp\/Fnr family transcriptional regulator\tK21563 dnr; CRP\/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator"
				}
				]
			},
			{
				"name":"Rrf2 family",
				"children":[
				{
					"name":"JTY93_05095 iscR; Fe-S cluster assembly transcriptional regulator IscR\tK13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor"
				}
				]
			},
			{
				"name":"ArsR family",
				"children":[
				{
					"name":"JTY93_11790 metalloregulator ArsR\/SmtB family transcription factor\tK03892 arsR; ArsR family transcriptional regulator, arsenate\/arsenite\/antimonite-responsive transcriptional repressor"
				},
				{
					"name":"JTY93_24735 metalloregulator ArsR\/SmtB family transcription factor\tK03892 arsR; ArsR family transcriptional regulator, arsenate\/arsenite\/antimonite-responsive transcriptional repressor"
				}
				]
			},
			{
				"name":"XRE family"
			},
			{
				"name":"PadR family"
			},
			{
				"name":"Other families",
				"children":[
				{
					"name":"JTY93_20030 MurR\/RpiR family transcriptional regulator\tK19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator"
				},
				{
					"name":"JTY93_27155 hexR; transcriptional regulator HexR\tK19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator"
				},
				{
					"name":"JTY93_24140 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase\/biotin operon repressor BirA\tK03524 birA; BirA family transcriptional regulator, biotin operon repressor \/ biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]"
				},
				{
					"name":"JTY93_02865 fis; DNA-binding transcriptional regulator Fis\tK03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein"
				},
				{
					"name":"JTY93_02035 transcriptional regulator\tK18831 higA; HTH-type transcriptional regulator \/ antitoxin HigA"
				},
				{
					"name":"JTY93_18650 transcriptional regulator\tK18831 higA; HTH-type transcriptional regulator \/ antitoxin HigA"
				},
				{
					"name":"JTY93_07545 sigma-54-dependent Fis family transcriptional regulator\tK10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein"
				},
				{
					"name":"JTY93_16950 sigma-54-dependent Fis family transcriptional regulator\tK21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR"
				},
				{
					"name":"JTY93_23360 sigma-54-dependent Fis family transcriptional regulator\tK21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR"
				},
				{
					"name":"JTY93_14265 sigma 54-interacting transcriptional regulator\tK11914 sfa2; sigma-54 dependent transcriptional regulator"
				},
				{
					"name":"JTY93_04770 norR; nitric oxide reductase transcriptional regulator NorR\tK12266 norR; anaerobic nitric oxide reductase transcription regulator"
				},
				{
					"name":"JTY93_24905 TOBE domain-containing protein\tK02019 modE; molybdate transport system regulatory protein"
				},
				{
					"name":"JTY93_15895 transcriptional regulator\tK07726 K07726; putative transcriptional regulator"
				},
				{
					"name":"JTY93_24830 DNA-binding transcriptional regulator\tK07726 K07726; putative transcriptional regulator"
				}
				]
			}
			]
		},
		{
			"name":"Ribbon-helix-helix",
			"children":[
			{
				"name":"CopG family"
			},
			{
				"name":"Other families",
				"children":[
				{
					"name":"JTY93_02075 putA; trifunctional transcriptional regulator\/proline dehydrogenase\/L-glutamate gamma-semialdehyde dehydrogenase\tK13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor \/ proline dehydrogenase \/ delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]"
				}
				]
			}
			]
		},
		{
			"name":"Other transcription factors",
			"children":[
			{
				"name":"BglG family"
			},
			{
				"name":"Others",
				"children":[
				{
					"name":"JTY93_10865 regulatory protein NosR\tK19339 nosR; NosR\/NirI family transcriptional regulator, nitrous oxide reductase regulator"
				},
				{
					"name":"JTY93_24710 metal\/formaldehyde-sensitive transcriptional repressor\tK23239 frmR; FrmR\/RcnR family transcriptional regulator, repressor of frmRAB operon"
				},
				{
					"name":"JTY93_08765 BolA family transcriptional regulator\tK05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator"
				},
				{
					"name":"JTY93_27390 ParB\/RepB\/Spo0J family partition protein\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein"
				},
				{
					"name":"JTY93_27440 PRTRC system ParB family protein\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein"
				},
				{
					"name":"JTY93_28635 ParB\/RepB\/Spo0J family partition protein\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein"
				},
				{
					"name":"JTY93_07455 sigma-54-dependent transcriptional regulator\tK03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport"
				},
				{
					"name":"JTY93_20260 sigma-54-dependent transcriptional regulator\tK03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport"
				},
				{
					"name":"JTY93_06600 glycine cleavage system protein R\tK03567 gcvR; glycine cleavage system transcriptional repressor"
				},
				{
					"name":"JTY93_26440 rnk; nucleoside diphosphate kinase regulator\tK06140 rnk; regulator of nucleoside diphosphate kinase"
				},
				{
					"name":"JTY93_27325 GNAT family N-acetyltransferase\tK06140 rnk; regulator of nucleoside diphosphate kinase"
				},
				{
					"name":"JTY93_25550 pyrR; bifunctional pyr operon transcriptional regulator\/uracil phosphoribosyltransferase PyrR\tK02825 pyrR; pyrimidine operon attenuation protein \/ uracil phosphoribosyltransferase [EC:2.4.2.9]"
				},
				{
					"name":"JTY93_04170 AlpA family phage regulatory protein\tK07733 alpA; prophage regulatory protein"
				},
				{
					"name":"JTY93_27095 FMN-binding negative transcriptional regulator\tK07734 paiB; transcriptional regulator"
				},
				{
					"name":"JTY93_25540 YqgE\/AlgH family protein\tK07735 algH; putative transcriptional regulator"
				},
				{
					"name":"JTY93_03780 dksA; RNA polymerase-binding protein DksA\tK06204 dksA; RNA polymerase-binding transcription factor"
				},
				{
					"name":"JTY93_10160 TraR\/DksA C4-type zinc finger protein\tK06204 dksA; RNA polymerase-binding transcription factor"
				},
				{
					"name":"JTY93_27220 dksA; RNA polymerase-binding protein DksA\tK06204 dksA; RNA polymerase-binding transcription factor"
				},
				{
					"name":"JTY93_27785 TraR\/DksA family transcriptional regulator\tK06204 dksA; RNA polymerase-binding transcription factor"
				},
				{
					"name":"JTY93_23765 nrdR; transcriptional regulator NrdR\tK07738 nrdR; transcriptional repressor NrdR"
				},
				{
					"name":"JTY93_21865 mraZ; division\/cell wall cluster transcriptional repressor MraZ\tK03925 mraZ; transcriptional regulator MraZ"
				}
				]
			}
			]
		}
		]
	}
	]
}