{
	"name":"ppb02035",
	"children":[
	{
		"name":"Flagellar system",
		"children":[
		{
			"name":"Chemotaxis proteins",
			"children":[
			{
				"name":"Two component system proteins",
				"children":[
				{
					"name":"PPUBIRD1_1513 cheA; CheA\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]"
				},
				{
					"name":"PPUBIRD1_1518 hypothetical protein\tK03408 cheW; purine-binding chemotaxis protein CheW"
				},
				{
					"name":"PPUBIRD1_1519 cheW; CheW\tK03408 cheW; purine-binding chemotaxis protein CheW"
				},
				{
					"name":"PPUBIRD1_1450 cheR; CheR\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]"
				},
				{
					"name":"PPUBIRD1_2002 MCP methyltransferase, CheR-type\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]"
				},
				{
					"name":"PPUBIRD1_1514 cheB; CheB\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]"
				},
				{
					"name":"PPUBIRD1_2003 CheB methylesterase\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]"
				},
				{
					"name":"PPUBIRD1_1511 Response regulator receiver protein\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY"
				},
				{
					"name":"PPUBIRD1_1512 cheZ; CheZ\tK03414 cheZ; chemotaxis protein CheZ"
				},
				{
					"name":"PPUBIRD1_0848 cheV; CheV\tK03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV"
				},
				{
					"name":"PPUBIRD1_1449 cheV_2; CheV_2\tK03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV"
				},
				{
					"name":"PPUBIRD1_3524 cheV_3; CheV_3\tK03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV"
				}
				]
			},
			{
				"name":"MCPs",
				"children":[
				{
					"name":"PPUBIRD1_0347 Methyl-accepting chemotaxis sensory transducer\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"PPUBIRD1_0350 Methyl-accepting chemotaxis sensory transducer\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"PPUBIRD1_0612 ctpL; CtpL\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"PPUBIRD1_0634 Methyl-accepting chemotaxis sensory transducer\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"PPUBIRD1_0824 Methyl-accepting chemotaxis sensory transducer\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"PPUBIRD1_1266 Methyl-accepting chemotaxis transducer\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"PPUBIRD1_2096 Chemotaxis sensory transducer\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"PPUBIRD1_2146 Methyl-accepting chemotaxis sensory transducer\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"PPUBIRD1_2237 Methyl-accepting chemotaxis transducer\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"PPUBIRD1_2375 Methyl-accepting chemotaxis sensory transducer\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"PPUBIRD1_2874 Methyl-accepting chemotaxis sensory transducer\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"PPUBIRD1_3037 Methyl-accepting chemotaxis sensory transducer\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"PPUBIRD1_3405 Methyl-accepting chemotaxis transducer\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"PPUBIRD1_3533 Methyl-accepting chemotaxis sensory transducer\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"PPUBIRD1_3793 Methyl-accepting chemotaxis sensory transducer\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"PPUBIRD1_4191 Methyl-accepting chemotaxis sensory transducer\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"PPUBIRD1_4354 Methyl-accepting chemotaxis sensory transducer\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"PPUBIRD1_4808 Methyl-accepting chemotaxis sensory transducer\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"PPUBIRD1_4809 Methyl-accepting chemotaxis sensory transducer\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"PPUBIRD1_1378 Methyl-accepting chemotaxis sensory transducer\tK03776 aer; aerotaxis receptor"
				},
				{
					"name":"PPUBIRD1_3397 Methyl-accepting chemotaxis sensory transducer\tK03776 aer; aerotaxis receptor"
				},
				{
					"name":"PPUBIRD1_3540 Methyl-accepting chemotaxis sensory transducer\tK03776 aer; aerotaxis receptor"
				}
				]
			}
			]
		},
		{
			"name":"Flagellar assembly proteins",
			"children":[
			{
				"name":"Type-III secretion",
				"children":[
				{
					"name":"PPUBIRD1_1492 fliH; FliH\tK02411 fliH; flagellar assembly protein FliH"
				},
				{
					"name":"PPUBIRD1_1493 fliI; FliI\tK02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]"
				},
				{
					"name":"PPUBIRD1_1494 fliJ; FliJ\tK02413 fliJ; flagellar protein FliJ"
				},
				{
					"name":"PPUBIRD1_1502 fliO; FliO\tK02418 fliO; flagellar protein FliO\/FliZ"
				},
				{
					"name":"PPUBIRD1_1503 fliP; FliP\tK02419 fliP; flagellar biosynthesis protein FliP"
				},
				{
					"name":"PPUBIRD1_1504 fliQ; FliQ\tK02420 fliQ; flagellar biosynthesis protein FliQ"
				},
				{
					"name":"PPUBIRD1_1505 fliR; FliR\tK02421 fliR; flagellar biosynthesis protein FliR"
				},
				{
					"name":"PPUBIRD1_1507 flhA; FlhA\tK02400 flhA; flagellar biosynthesis protein FlhA"
				},
				{
					"name":"PPUBIRD1_1506 flhB; FlhB\tK02401 flhB; flagellar biosynthesis protein FlhB"
				}
				]
			},
			{
				"name":"C ring",
				"children":[
				{
					"name":"PPUBIRD1_1491 fliG; FliG\tK02410 fliG; flagellar motor switch protein FliG"
				},
				{
					"name":"PPUBIRD1_1500 fliM; FliM\tK02416 fliM; flagellar motor switch protein FliM"
				},
				{
					"name":"PPUBIRD1_1501 fliN; FliN\tK02417 fliN; flagellar motor switch protein FliN"
				}
				]
			},
			{
				"name":"M, S, P and L rings",
				"children":[
				{
					"name":"PPUBIRD1_1490 fliF; FliF\tK02409 fliF; flagellar M-ring protein FliF"
				},
				{
					"name":"PPUBIRD1_1459 flgI; FlgI\tK02394 flgI; flagellar P-ring protein FlgI"
				},
				{
					"name":"PPUBIRD1_1448 flgA; FlgA\tK02386 flgA; flagellar basal body P-ring formation protein FlgA"
				},
				{
					"name":"PPUBIRD1_1458 flgH; FlgH\tK02393 flgH; flagellar L-ring protein FlgH"
				},
				{
					"name":"PPUBIRD1_1499 fliL; FliL\tK02415 fliL; flagellar protein FliL"
				},
				{
					"name":"PPUBIRD1_5005 Flagellar basal body-associated protein FliL-like protein\tK02415 fliL; flagellar protein FliL"
				}
				]
			},
			{
				"name":"Rod and hook",
				"children":[
				{
					"name":"PPUBIRD1_1489 fliE; FliE\tK02408 fliE; flagellar hook-basal body complex protein FliE"
				},
				{
					"name":"PPUBIRD1_1498 fliK; FliK\tK02414 fliK; flagellar hook-length control protein FliK"
				},
				{
					"name":"PPUBIRD1_1451 flgB; FlgB\tK02387 flgB; flagellar basal-body rod protein FlgB"
				},
				{
					"name":"PPUBIRD1_1452 flgC; FlgC\tK02388 flgC; flagellar basal-body rod protein FlgC"
				},
				{
					"name":"PPUBIRD1_1453 flgD; FlgD\tK02389 flgD; flagellar basal-body rod modification protein FlgD"
				},
				{
					"name":"PPUBIRD1_1456 Flagellar basal body rod protein FlgF\tK02391 flgF; flagellar basal-body rod protein FlgF"
				},
				{
					"name":"PPUBIRD1_1457 flgG; FlgG\tK02392 flgG; flagellar basal-body rod protein FlgG"
				},
				{
					"name":"PPUBIRD1_1460 flgJ; FlgJ\tK02395 flgJ; peptidoglycan hydrolase FlgJ"
				},
				{
					"name":"PPUBIRD1_1454 flgE; FlgE\tK02390 flgE; flagellar hook protein FlgE"
				},
				{
					"name":"PPUBIRD1_1461 flgK; FlgK\tK02396 flgK; flagellar hook-associated protein 1"
				},
				{
					"name":"PPUBIRD1_1462 flgL; FlgL\tK02397 flgL; flagellar hook-associated protein 3 FlgL"
				},
				{
					"name":"PPUBIRD1_1446 FlgN family protein\tK02399 flgN; flagellar biosynthesis protein FlgN"
				}
				]
			},
			{
				"name":"H and T rings",
				"children":[
				{
					"name":"PPUBIRD1_1137 OmpA\/MotB domain-containing protein\tK21218 motY; sodium-type flagellar protein MotY"
				}
				]
			},
			{
				"name":"Filament",
				"children":[
				{
					"name":"PPUBIRD1_1465 Flagellin\tK02406 fliC; flagellin"
				},
				{
					"name":"PPUBIRD1_1467 Flagellar hook-associated 2 domain-containing protein\tK02407 fliD; flagellar hook-associated protein 2"
				},
				{
					"name":"PPUBIRD1_1468 fliS; FliS\tK02422 fliS; flagellar secretion chaperone FliS"
				},
				{
					"name":"PPUBIRD1_1469 Hypothetical protein, conserved\tK02423 fliT; flagellar protein FliT"
				}
				]
			},
			{
				"name":"Stator",
				"children":[
				{
					"name":"PPUBIRD1_1510 fliA; FliA\tK02405 fliA; RNA polymerase sigma factor FliA"
				},
				{
					"name":"PPUBIRD1_1515 motC; MotC\tK02556 motA; chemotaxis protein MotA"
				},
				{
					"name":"PPUBIRD1_4692 Flagellar motor protein MotA\tK02556 motA; chemotaxis protein MotA"
				},
				{
					"name":"PPUBIRD1_1516 Flagellar motor protein MotD\tK02557 motB; chemotaxis protein MotB"
				},
				{
					"name":"PPUBIRD1_4691 motB; MotB\tK02557 motB; chemotaxis protein MotB"
				}
				]
			},
			{
				"name":"Others",
				"children":[
				{
					"name":"PPUBIRD1_1470 fleQ; FleQ\tK10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein"
				},
				{
					"name":"PPUBIRD1_1487 fleS; FleS\tK10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]"
				},
				{
					"name":"PPUBIRD1_1488 Two component, sigma54 specific, Fis family transcriptional regulator\tK10943 flrC; two-component system, response regulator FlrC"
				},
				{
					"name":"PPUBIRD1_0251 Cystine transporter subunit\tK02424 tcyA; L-cystine transport system substrate-binding protein"
				},
				{
					"name":"PPUBIRD1_4948 Hypothetical protein, conserved\tK02424 tcyA; L-cystine transport system substrate-binding protein"
				},
				{
					"name":"PPUBIRD1_1447 flgM; FlgM\tK02398 flgM; negative regulator of flagellin synthesis FlgM"
				},
				{
					"name":"PPUBIRD1_1466 Flagellar protein FlaG protein\tK06603 flaG; flagellar protein FlaG"
				},
				{
					"name":"PPUBIRD1_1508 flhF; FlhF\tK02404 flhF; flagellar biosynthesis protein FlhF"
				},
				{
					"name":"PPUBIRD1_1509 fleN; FleN\tK04562 flhG; flagellar biosynthesis protein FlhG"
				}
				]
			}
			]
		},
		{
			"name":"Archaeal flagellar assembly proteins"
		}
		]
	},
	{
		"name":"Pilus system",
		"children":[
		{
			"name":"Twitching motility proteins",
			"children":[
			{
				"name":"PPUBIRD1_4779 pilG; PilG\tK02657 pilG; twitching motility two-component system response regulator PilG"
			},
			{
				"name":"PPUBIRD1_4778 Response regulator receiver protein\tK02658 pilH; twitching motility two-component system response regulator PilH"
			},
			{
				"name":"PPUBIRD1_4777 Putative CheW protein\tK02659 pilI; twitching motility protein PilI"
			},
			{
				"name":"PPUBIRD1_4776 Protein pilJ\tK02660 pilJ; twitching motility protein PilJ"
			},
			{
				"name":"PPUBIRD1_4775 CheA signal transduction histidine kinase\tK06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase\/response regulator)"
			},
			{
				"name":"PPUBIRD1_4882 Twitching motility protein\tK02669 pilT; twitching motility protein PilT"
			}
			]
		},
		{
			"name":"Chemosensory pili system proteins",
			"children":[
			{
				"name":"PPUBIRD1_4775 CheA signal transduction histidine kinase\tK06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase\/response regulator)"
			},
			{
				"name":"PPUBIRD1_4774 CheW domain protein\tK06598 chpC; chemosensory pili system protein ChpC"
			}
			]
		},
		{
			"name":"Positive phototactic motility proteins"
		},
		{
			"name":"Pilus assembly proteins",
			"children":[
			{
				"name":"PPUBIRD1_0687 Fimbrial protein pilin\tK02650 pilA; type IV pilus assembly protein PilA"
			},
			{
				"name":"PPUBIRD1_0686 pilC; PilC\tK02653 pilC; type IV pilus assembly protein PilC"
			},
			{
				"name":"PPUBIRD1_0685 Prepilin peptidase\tK02654 pilD; leader peptidase (prepilin peptidase) \/ N-methyltransferase [EC:3.4.23.43 2.1.1.-]"
			},
			{
				"name":"PPUBIRD1_0902 pilF; PilF\tK02656 pilF; type IV pilus assembly protein PilF"
			},
			{
				"name":"PPUBIRD1_4869 pilQ; PilQ\tK02666 pilQ; type IV pilus assembly protein PilQ"
			},
			{
				"name":"PPUBIRD1_4870 Type IV pili biogenesis protein\tK23985 pilOP; type IV pilus assembly protein PilOP"
			},
			{
				"name":"PPUBIRD1_4871 pilN; PilN\tK02663 pilN; type IV pilus assembly protein PilN"
			},
			{
				"name":"PPUBIRD1_4872 Type IV pili biogenesis protein PilM, putative\tK02662 pilM; type IV pilus assembly protein PilM"
			},
			{
				"name":"PPUBIRD1_0660 Hypothetical protein, conserved\tK02672 pilW; type IV pilus assembly protein PilW"
			},
			{
				"name":"PPUBIRD1_0661 Hypothetical protein, conserved\tK02673 pilX; type IV pilus assembly protein PilX"
			},
			{
				"name":"PPUBIRD1_0662 pilE; PilE\tK02655 pilE; type IV pilus assembly protein PilE"
			},
			{
				"name":"PPUBIRD1_0625 Hypothetical protein, conserved\tK02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]"
			}
			]
		},
		{
			"name":"Fimbrial proteins",
			"children":[
			{
				"name":"PPUBIRD1_3662 Fimbrial protein-like protein\tK07345 fimA; major type 1 subunit fimbrin (pilin)"
			},
			{
				"name":"PPUBIRD1_3326 csuC; CsuC\tK07346 fimC; fimbrial chaperone protein"
			},
			{
				"name":"PPUBIRD1_3325 csuD; CsuD\tK07347 fimD; outer membrane usher protein"
			},
			{
				"name":"PPUBIRD1_3664 Fimbrial biogenesis outer membrane usher protein\tK07347 fimD; outer membrane usher protein"
			},
			{
				"name":"PPUBIRD1_3324 csuE; CsuE\tK27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1\/2\/3\/6"
			},
			{
				"name":"PPUBIRD1_3327 Spore coat U domain protein\tK27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1\/2\/3\/6"
			},
			{
				"name":"PPUBIRD1_3328 Spore coat U domain protein\tK27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1\/2\/3\/6"
			},
			{
				"name":"PPUBIRD1_3329 Spore coat U domain-containing protein\tK27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1\/2\/3\/6"
			},
			{
				"name":"PPUBIRD1_3330 Spore coat U domain protein\tK27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1\/2\/3\/6"
			}
			]
		}
		]
	}
	]
}