{
	"name":"pti03019",
	"children":[
	{
		"name":"Eukaryotic type",
		"children":[
		{
			"name":"mRNA processing factors",
			"children":[
			{
				"name":"5' end processing",
				"children":[
				{
					"name":"Capping factors",
					"children":[
					{
						"name":"PHATRDRAFT_43071 hypothetical protein\tK00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]"
					},
					{
						"name":"PHATRDRAFT_20262 CDKA1; hypothetical protein\tK04563 CDC28; cyclin-dependent kinase [EC:2.7.11.22]"
					},
					{
						"name":"PHATRDRAFT_10160 CDKD1; hypothetical protein\tK02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]"
					},
					{
						"name":"PHATRDRAFT_49487 hypothetical protein\tK14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57]"
					}
					]
				},
				{
					"name":"Cap binding complex",
					"children":[
					{
						"name":"PHATR_13520 hypothetical protein\tK12883 NCBP2; nuclear cap-binding protein subunit 2"
					}
					]
				}
				]
			},
			{
				"name":"3' end processing",
				"children":[
				{
					"name":"Pre-mRNA cleavage factor Im (CFIm)"
				},
				{
					"name":"Pre-mRNA cleavage factor IIm (CFIIm)",
					"children":[
					{
						"name":"PHATRDRAFT_15508 hypothetical protein\tK14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]"
					},
					{
						"name":"PHATRDRAFT_47180 hypothetical protein\tK14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11"
					}
					]
				},
				{
					"name":"Cleavage and polyadenylation specificity factor (CPSF) complex",
					"children":[
					{
						"name":"PHATRDRAFT_42753 hypothetical protein\tK14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1"
					},
					{
						"name":"PHATRDRAFT_52285 cleavage and polyadenylation specific factor\tK14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2"
					},
					{
						"name":"PHATRDRAFT_28482 hypothetical protein\tK14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]"
					},
					{
						"name":"PHATRDRAFT_45542 hypothetical protein\tK14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4"
					},
					{
						"name":"PHATRDRAFT_50624 hypothetical protein\tK14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4"
					},
					{
						"name":"PHATRDRAFT_29608 PAF1; PolyAdenylation factor subunit 1\tK15542 PFS2; polyadenylation factor subunit 2"
					},
					{
						"name":"PHATRDRAFT_11777 hypothetical protein\tK06269 PPP1C; serine\/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]"
					},
					{
						"name":"PHATRDRAFT_18899 hypothetical protein\tK06269 PPP1C; serine\/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]"
					},
					{
						"name":"PHATRDRAFT_50645 hypothetical protein\tK06269 PPP1C; serine\/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]"
					},
					{
						"name":"PHATRDRAFT_13834 hypothetical protein\tK15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]"
					}
					]
				},
				{
					"name":"Cleavage stimulation factor (CSTF) complex",
					"children":[
					{
						"name":"PHATRDRAFT_8451 hypothetical protein\tK14407 CSTF2; cleavage stimulation factor subunit 2"
					},
					{
						"name":"PHATRDRAFT_43779 hypothetical protein\tK06100 SYMPK; symplekin"
					}
					]
				},
				{
					"name":"U7-dependent histone pre-mRNA processing factors",
					"children":[
					{
						"name":"PHATRDRAFT_35063 hypothetical protein\tK11086 SNRPB; small nuclear ribonucleoprotein B and B'"
					},
					{
						"name":"PHATRDRAFT_9168 hypothetical protein\tK11088 SNRPD3; small nuclear ribonucleoprotein D3"
					},
					{
						"name":"PHATRDRAFT_15709 hypothetical protein\tK11097 SNRPE; small nuclear ribonucleoprotein E"
					},
					{
						"name":"PHATRDRAFT_20167 hypothetical protein\tK11098 SNRPF; small nuclear ribonucleoprotein F"
					},
					{
						"name":"PHATRDRAFT_20588 hypothetical protein\tK11099 SNRPG; small nuclear ribonucleoprotein G"
					},
					{
						"name":"PHATRDRAFT_43068 hypothetical protein\tK25592 LSM11; U7 snRNA-associated Sm-like protein LSm11"
					},
					{
						"name":"PHATRDRAFT_52285 cleavage and polyadenylation specific factor\tK14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2"
					},
					{
						"name":"PHATRDRAFT_28482 hypothetical protein\tK14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]"
					},
					{
						"name":"PHATRDRAFT_8451 hypothetical protein\tK14407 CSTF2; cleavage stimulation factor subunit 2"
					},
					{
						"name":"PHATRDRAFT_43779 hypothetical protein\tK06100 SYMPK; symplekin"
					},
					{
						"name":"PHATRDRAFT_43529 hypothetical protein\tK18710 SLBP; histone RNA hairpin-binding protein"
					}
					]
				},
				{
					"name":"DRB sensitivity inducing factor (DSIF) complex",
					"children":[
					{
						"name":"PHATRDRAFT_27082 hypothetical protein\tK15171 SUPT4H1; transcription elongation factor SPT4"
					},
					{
						"name":"PHATRDRAFT_47388 hypothetical protein\tK15172 SUPT5H; transcription elongation factor SPT5"
					}
					]
				},
				{
					"name":"N6-methyltransferase complex"
				},
				{
					"name":"Poly(A) addition factors",
					"children":[
					{
						"name":"PHATRDRAFT_12234 GABAR1 G protein-coupled GABA receptor\tK14376 PAP; poly(A) polymerase [EC:2.7.7.19]"
					},
					{
						"name":"PHATRDRAFT_47826 hypothetical protein\tK14376 PAP; poly(A) polymerase [EC:2.7.7.19]"
					}
					]
				},
				{
					"name":"Negative regulators of mRNA 3' end processing"
				}
				]
			},
			{
				"name":"Other processing factors",
				"children":[
				{
					"name":"PHATR_5508 hypothetical protein\tK13102 KIN; DNA\/RNA-binding protein KIN17"
				},
				{
					"name":"PHATRDRAFT_48857 hypothetical protein\tK27103 SRRT; serrate RNA effector molecule"
				}
				]
			}
			]
		},
		{
			"name":"mRNA surveillance and transport factors",
			"children":[
			{
				"name":"Transport factors",
				"children":[
				{
					"name":"EJC complex",
					"children":[
					{
						"name":"PHATRDRAFT_20716 hypothetical protein\tK12876 RBM8A; RNA-binding protein 8A"
					},
					{
						"name":"PHATR_33540 hypothetical protein\tK12877 MAGOH; protein mago nashi"
					},
					{
						"name":"PHATRDRAFT_51301 helicase_5; hypothetical protein\tK12812 DDX39B; ATP-dependent RNA helicase UAP56\/SUB2 [EC:5.6.2.7]"
					},
					{
						"name":"PHATR_41785 hypothetical protein\tK13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]"
					}
					]
				},
				{
					"name":"TREX complex",
					"children":[
					{
						"name":"PHATRDRAFT_47759 hypothetical protein\tK12878 THOC1; THO complex subunit 1"
					},
					{
						"name":"PHATRDRAFT_44632 hypothetical protein\tK12879 THOC2; THO complex subunit 2"
					},
					{
						"name":"PHATR_43990 hypothetical protein\tK12880 THOC3; THO complex subunit 3"
					},
					{
						"name":"PHATRDRAFT_48787 hypothetical protein\tK13176 THOC7; THO complex subunit 7"
					}
					]
				},
				{
					"name":"TREX-2 complex",
					"children":[
					{
						"name":"PHATR_13237 hypothetical protein\tK23801 PCID2; nuclear mRNA export protein PCID2\/THP1"
					},
					{
						"name":"PHATR_33504 hypothetical protein\tK11368 ENY2; enhancer of yellow 2 transcription factor"
					}
					]
				},
				{
					"name":"Nuclear pore complex",
					"children":[
					{
						"name":"PHATRDRAFT_35556 hypothetical protein\tK09291 TPR; nucleoprotein TPR"
					},
					{
						"name":"PHATRDRAFT_24439 hypothetical protein\tK14298 RAE1; mRNA export factor"
					},
					{
						"name":"PHATRDRAFT_24996 Sec13; hypothetical protein\tK14004 SEC13; protein transport protein SEC13"
					},
					{
						"name":"PHATRDRAFT_50425 hypothetical protein\tK14306 NUP62; nuclear pore complex protein Nup62"
					},
					{
						"name":"PHATRDRAFT_47393 hypothetical protein\tK14309 NUP93; nuclear pore complex protein Nup93"
					},
					{
						"name":"PHATRDRAFT_45854 hypothetical protein\tK14297 NUP98; nuclear pore complex protein Nup98-Nup96"
					},
					{
						"name":"PHATRDRAFT_46440 hypothetical protein\tK14301 NUP107; nuclear pore complex protein Nup107"
					},
					{
						"name":"PHATRDRAFT_35311 hypothetical protein\tK14312 NUP155; nuclear pore complex protein Nup155"
					},
					{
						"name":"PHATR_46906 hypothetical protein\tK14313 NUP35; nuclear pore complex protein Nup53"
					},
					{
						"name":"PHATRDRAFT_4700 hypothetical protein\tK14299 SEH1; nucleoporin SEH1"
					}
					]
				},
				{
					"name":"Ran-mediated transport factors",
					"children":[
					{
						"name":"PHATRDRAFT_40841 Ran2; hypothetical protein\tK07936 RAN; GTP-binding nuclear protein Ran"
					},
					{
						"name":"PHATRDRAFT_51169 Ran1; hypothetical protein\tK07936 RAN; GTP-binding nuclear protein Ran"
					},
					{
						"name":"PHATRDRAFT_44360 hypothetical protein\tK18726 FAF2; FAS-associated factor 2"
					},
					{
						"name":"PHATR_21083 hCdc48; hypothetical protein\tK13525 VCP; transitional endoplasmic reticulum ATPase"
					},
					{
						"name":"PHATRDRAFT_24186 hypothetical protein\tK14290 XPO1; exportin-1"
					},
					{
						"name":"PHATRDRAFT_18067 hypothetical protein\tK18460 XPO7; exportin-7"
					},
					{
						"name":"PHATRDRAFT_54869 hypothetical protein\tK14319 RANGAP1; Ran GTPase-activating protein 1"
					},
					{
						"name":"PHATRDRAFT_15688 hypothetical protein\tK28773 NUTF2; nuclear transport factor 2"
					}
					]
				},
				{
					"name":"eIF4F and regulatory proteins",
					"children":[
					{
						"name":"PHATRDRAFT_44459 hypothetical protein\tK03259 EIF4E; translation initiation factor 4E"
					},
					{
						"name":"PHATRDRAFT_9731 hypothetical protein\tK03259 EIF4E; translation initiation factor 4E"
					},
					{
						"name":"PHATRDRAFT_9829 hypothetical protein\tK03259 EIF4E; translation initiation factor 4E"
					},
					{
						"name":"PHATR_25743 hypothetical protein\tK03257 EIF4A; translation initiation factor 4A"
					},
					{
						"name":"PHATRDRAFT_47943 hypothetical protein\tK03260 EIF4G; translation initiation factor 4G"
					},
					{
						"name":"PHATRDRAFT_43274 hypothetical protein\tK24086 EIF4H; translation initiation factor 4H"
					},
					{
						"name":"PHATRDRAFT_2097 hypothetical protein\tK11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]"
					},
					{
						"name":"PHATRDRAFT_23959 hypothetical protein\tK13126 PABPC; polyadenylate-binding protein"
					},
					{
						"name":"PHATRDRAFT_33072 hypothetical protein\tK12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]"
					},
					{
						"name":"PHATRDRAFT_16787 hypothetical protein\tK07575 MCTS; malignant T-cell-amplified sequence"
					},
					{
						"name":"PHATRDRAFT_31987 hypothetical protein\tK24272 DENR; density-regulated protein"
					}
					]
				},
				{
					"name":"APOBEC1-ACF complex"
				},
				{
					"name":"Other transport factors",
					"children":[
					{
						"name":"PHATRDRAFT_41450 hypothetical protein\tK14411 MSI; RNA-binding protein Musashi"
					},
					{
						"name":"PHATR_21039 hypothetical protein\tK14411 MSI; RNA-binding protein Musashi"
					},
					{
						"name":"PHATRDRAFT_24748 hypothetical protein\tK06965 PELO; protein pelota"
					},
					{
						"name":"PHATRDRAFT_13095 hypothetical protein\tK14396 PABPN1; polyadenylate-binding protein 2"
					},
					{
						"name":"PHATRDRAFT_13053 hypothetical protein\tK12867 SYF1; pre-mRNA-splicing factor SYF1"
					},
					{
						"name":"PHATRDRAFT_36476 hypothetical protein\tK11493 RCC1; regulator of chromosome condensation"
					},
					{
						"name":"PHATRDRAFT_46213 hypothetical protein\tK23802 LENG8; SAC3 family protein LENG8\/THP3"
					}
					]
				}
				]
			},
			{
				"name":"Surveillance factors",
				"children":[
				{
					"name":"Surveillance complex",
					"children":[
					{
						"name":"PHATRDRAFT_50796 hypothetical protein\tK03265 ETF1; peptide chain release factor subunit 1"
					},
					{
						"name":"PHATRDRAFT_34493 hypothetical protein\tK03267 ERF3; peptide chain release factor subunit 3"
					},
					{
						"name":"PHATRDRAFT_16357 hypothetical protein\tK14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]"
					},
					{
						"name":"PHATRDRAFT_50132 hypothetical protein\tK14327 UPF2; regulator of nonsense transcripts 2"
					}
					]
				},
				{
					"name":"Protein phosphatase 2A",
					"children":[
					{
						"name":"PHATRDRAFT_22247 hypothetical protein\tK04382 PPP2C; serine\/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]"
					},
					{
						"name":"PHATRDRAFT_51017 hypothetical protein\tK04382 PPP2C; serine\/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]"
					},
					{
						"name":"PHATRDRAFT_bd800 hypothetical protein\tK04382 PPP2C; serine\/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]"
					},
					{
						"name":"PHATRDRAFT_12174 hypothetical protein\tK03456 PPP2R1; serine\/threonine-protein phosphatase 2A regulatory subunit A"
					},
					{
						"name":"PHATRDRAFT_30334 hypothetical protein\tK03456 PPP2R1; serine\/threonine-protein phosphatase 2A regulatory subunit A"
					},
					{
						"name":"PHATRDRAFT_1745 hypothetical protein\tK11583 PPP2R3; serine\/threonine-protein phosphatase 2A regulatory subunit B''"
					},
					{
						"name":"PHATRDRAFT_11741 hypothetical protein\tK11584 PPP2R5; serine\/threonine-protein phosphatase 2A regulatory subunit B'"
					}
					]
				},
				{
					"name":"Other surveillance factors",
					"children":[
					{
						"name":"PHATRDRAFT_42840 hypothetical protein\tK19539 SECISBP2; selenocysteine insertion sequence-binding protein 2"
					},
					{
						"name":"PHATRDRAFT_9185 hypothetical protein\tK24887 GTPBP1; GTP-binding protein 1"
					}
					]
				}
				]
			},
			{
				"name":"Factors involved in mRNA localization",
				"children":[
				{
					"name":"Cargo complex",
					"children":[
					{
						"name":"PHATRDRAFT_47058 hypothetical protein\tK14844 PUF6; pumilio homology domain family member 6"
					},
					{
						"name":"PHATRDRAFT_432 myoA4; hypothetical protein\tK10357 MYO5; myosin V"
					},
					{
						"name":"PHATRDRAFT_54688 myoA3; hypothetical protein\tK10357 MYO5; myosin V"
					}
					]
				},
				{
					"name":"Factors that have mRNA localization signals",
					"children":[
					{
						"name":"PHATRDRAFT_29136 Act2; actin\/actin like protein\tK05692 ACTB_G1; actin beta\/gamma 1"
					},
					{
						"name":"PHATRDRAFT_29812 hypothetical protein\tK05692 ACTB_G1; actin beta\/gamma 1"
					},
					{
						"name":"PHATRDRAFT_51157 ACT1; actin\/actin like protein\tK05692 ACTB_G1; actin beta\/gamma 1"
					}
					]
				},
				{
					"name":"Trans-acting binding proteins",
					"children":[
					{
						"name":"PHATRDRAFT_28737 hypothetical protein\tK03231 EEF1A; elongation factor 1-alpha"
					},
					{
						"name":"PHATR_18475 EF-1; translation elongation factor, EF-1, alpha subunit\tK03231 EEF1A; elongation factor 1-alpha"
					},
					{
						"name":"PHATRDRAFT_26176 hypothetical protein\tK03233 EEF1G; elongation factor 1-gamma"
					}
					]
				},
				{
					"name":"Other mRNA localization factors"
				}
				]
			},
			{
				"name":"mRNA cycle factors",
				"children":[
				{
					"name":"Common to processing body (P body) and stress granule",
					"children":[
					{
						"name":"PHATRDRAFT_42998 hypothetical protein\tK12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]"
					},
					{
						"name":"PHATRDRAFT_5588 hypothetical protein\tK12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]"
					},
					{
						"name":"PHATRDRAFT_44459 hypothetical protein\tK03259 EIF4E; translation initiation factor 4E"
					},
					{
						"name":"PHATRDRAFT_9731 hypothetical protein\tK03259 EIF4E; translation initiation factor 4E"
					},
					{
						"name":"PHATRDRAFT_9829 hypothetical protein\tK03259 EIF4E; translation initiation factor 4E"
					},
					{
						"name":"PHATRDRAFT_16357 hypothetical protein\tK14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]"
					},
					{
						"name":"PHATRDRAFT_2097 hypothetical protein\tK11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]"
					},
					{
						"name":"PHATRDRAFT_45848 hypothetical protein\tK18749 LSM14; protein LSM14"
					},
					{
						"name":"PHATRDRAFT_9413 hypothetical protein\tK04345 PKA; protein kinase A [EC:2.7.11.11]"
					}
					]
				},
				{
					"name":"P-body specific factors",
					"children":[
					{
						"name":"PHATRDRAFT_46543 hypothetical protein\tK12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]"
					},
					{
						"name":"PHATRDRAFT_46257 hypothetical protein\tK12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]"
					},
					{
						"name":"PHATRDRAFT_50048 hypothetical protein\tK12620 LSM1; U6 snRNA-associated Sm-like protein LSm1"
					},
					{
						"name":"PHATR_10494 hypothetical protein\tK12621 LSM2; U6 snRNA-associated Sm-like protein LSm2"
					},
					{
						"name":"PHATRDRAFT_42364 hypothetical protein\tK12622 LSM3; U6 snRNA-associated Sm-like protein LSm3"
					},
					{
						"name":"PHATRDRAFT_7848 hypothetical protein\tK12623 LSM4; U6 snRNA-associated Sm-like protein LSm4"
					},
					{
						"name":"PHATR_10583 hypothetical protein\tK12624 LSM5; U6 snRNA-associated Sm-like protein LSm5"
					},
					{
						"name":"PHATRDRAFT_8518 hypothetical protein\tK12625 LSM6; U6 snRNA-associated Sm-like protein LSm6"
					},
					{
						"name":"PHATRDRAFT_8840 hypothetical protein\tK12626 LSM7; U6 snRNA-associated Sm-like protein LSm7"
					},
					{
						"name":"PHATRDRAFT_10752 hypothetical protein\tK12627 LSM8; U6 snRNA-associated Sm-like protein LSm8"
					},
					{
						"name":"PHATRDRAFT_432 myoA4; hypothetical protein\tK10357 MYO5; myosin V"
					},
					{
						"name":"PHATRDRAFT_54688 myoA3; hypothetical protein\tK10357 MYO5; myosin V"
					},
					{
						"name":"PHATRDRAFT_54534 hypothetical protein\tK07374 TUBA; tubulin alpha"
					},
					{
						"name":"PHATR_10354 hypothetical protein\tK12604 CNOT1; CCR4-NOT transcription complex subunit 1"
					},
					{
						"name":"PHATR_18735 hypothetical protein\tK12604 CNOT1; CCR4-NOT transcription complex subunit 1"
					},
					{
						"name":"PHATRDRAFT_43176 hypothetical protein\tK12605 CNOT2; CCR4-NOT transcription complex subunit 2"
					},
					{
						"name":"PHATRDRAFT_9231 hypothetical protein\tK12580 CNOT3; CCR4-NOT transcription complex subunit 3"
					},
					{
						"name":"PHATRDRAFT_10102 hypothetical protein\tK10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]"
					},
					{
						"name":"PHATRDRAFT_42429 hypothetical protein\tK12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]"
					},
					{
						"name":"PHATRDRAFT_9576 hypothetical protein\tK12581 CNOT7_8; CCR4-NOT transcription complex subunit 7\/8"
					},
					{
						"name":"PHATRDRAFT_46460 hypothetical protein\tK12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]"
					},
					{
						"name":"PHATRDRAFT_50229 hypothetical protein\tK12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3"
					},
					{
						"name":"PHATRDRAFT_50132 hypothetical protein\tK14327 UPF2; regulator of nonsense transcripts 2"
					},
					{
						"name":"PHATRDRAFT_35680 RNAP-II_3; hypothetical protein\tK03015 RPB7; DNA-directed RNA polymerase II subunit RPB7"
					}
					]
				},
				{
					"name":"Stress granule specific factors",
					"children":[
					{
						"name":"PHATRDRAFT_23959 hypothetical protein\tK13126 PABPC; polyadenylate-binding protein"
					},
					{
						"name":"PHATRDRAFT_48306 hypothetical protein\tK15026 EIF2A; translation initiation factor 2A"
					},
					{
						"name":"PHATRDRAFT_26975 hypothetical protein\tK03253 EIF3B; translation initiation factor 3 subunit B"
					},
					{
						"name":"PHATR_25743 hypothetical protein\tK03257 EIF4A; translation initiation factor 4A"
					},
					{
						"name":"PHATR_41785 hypothetical protein\tK13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]"
					},
					{
						"name":"PHATRDRAFT_47943 hypothetical protein\tK03260 EIF4G; translation initiation factor 4G"
					},
					{
						"name":"PHATRDRAFT_28694 hypothetical protein\tK14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein"
					},
					{
						"name":"PHATRDRAFT_35869 hypothetical protein\tK11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98]"
					},
					{
						"name":"PHATRDRAFT_45906 hypothetical protein\tK11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98]"
					}
					]
				}
				]
			}
			]
		},
		{
			"name":"mRNA degradation factors",
			"children":[
			{
				"name":"5'-3' decay",
				"children":[
				{
					"name":"Decapping complex",
					"children":[
					{
						"name":"PHATRDRAFT_46257 hypothetical protein\tK12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]"
					},
					{
						"name":"PHATRDRAFT_46543 hypothetical protein\tK12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]"
					}
					]
				},
				{
					"name":"Lsm complex",
					"children":[
					{
						"name":"PHATRDRAFT_50048 hypothetical protein\tK12620 LSM1; U6 snRNA-associated Sm-like protein LSm1"
					},
					{
						"name":"PHATR_10494 hypothetical protein\tK12621 LSM2; U6 snRNA-associated Sm-like protein LSm2"
					},
					{
						"name":"PHATRDRAFT_42364 hypothetical protein\tK12622 LSM3; U6 snRNA-associated Sm-like protein LSm3"
					},
					{
						"name":"PHATRDRAFT_7848 hypothetical protein\tK12623 LSM4; U6 snRNA-associated Sm-like protein LSm4"
					},
					{
						"name":"PHATR_10583 hypothetical protein\tK12624 LSM5; U6 snRNA-associated Sm-like protein LSm5"
					},
					{
						"name":"PHATRDRAFT_8518 hypothetical protein\tK12625 LSM6; U6 snRNA-associated Sm-like protein LSm6"
					},
					{
						"name":"PHATRDRAFT_8840 hypothetical protein\tK12626 LSM7; U6 snRNA-associated Sm-like protein LSm7"
					},
					{
						"name":"PHATRDRAFT_10752 hypothetical protein\tK12627 LSM8; U6 snRNA-associated Sm-like protein LSm8"
					}
					]
				},
				{
					"name":"5' exonucleases",
					"children":[
					{
						"name":"PHATRDRAFT_42998 hypothetical protein\tK12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]"
					},
					{
						"name":"PHATRDRAFT_5588 hypothetical protein\tK12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]"
					},
					{
						"name":"PHATRDRAFT_15233 hypothetical protein\tK12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]"
					}
					]
				},
				{
					"name":"Other 5'-3' decay factors"
				}
				]
			},
			{
				"name":"3'-5' decay",
				"children":[
				{
					"name":"Core exosome factors",
					"children":[
					{
						"name":"PHATRDRAFT_37291 hypothetical protein\tK07573 CSL4; exosome complex component CSL4"
					},
					{
						"name":"PHATRDRAFT_bd509 hypothetical protein\tK03679 RRP4; exosome complex component RRP4"
					},
					{
						"name":"PHATRDRAFT_12921 hypothetical protein\tK03681 RRP40; exosome complex component RRP40"
					},
					{
						"name":"PHATRDRAFT_23286 hypothetical protein\tK11600 RRP41; exosome complex component RRP41"
					},
					{
						"name":"PHATRDRAFT_16766 hypothetical protein\tK12590 RRP46; exosome complex component RRP46"
					},
					{
						"name":"PHATRDRAFT_12322 hypothetical protein\tK12587 MTR3; exosome complex component MTR3"
					},
					{
						"name":"PHATRDRAFT_55141 RRP; ribosomal RNA processing protein\tK12589 RRP42; exosome complex component RRP42"
					},
					{
						"name":"PHATRDRAFT_16560 hypothetical protein\tK03678 RRP45; exosome complex component RRP45"
					}
					]
				},
				{
					"name":"Exosome cofactors",
					"children":[
					{
						"name":"PHATRDRAFT_23306 hypothetical protein\tK12585 DIS3; exosome complex exonuclease DIS3\/RRP44 [EC:3.1.13.-]"
					},
					{
						"name":"PHATRDRAFT_22703 hypothetical protein\tK12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]"
					},
					{
						"name":"PHATRDRAFT_47412 hypothetical protein\tK20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]"
					}
					]
				},
				{
					"name":"TRAMP complex",
					"children":[
					{
						"name":"PHATRDRAFT_50326 hypothetical protein\tK12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]"
					}
					]
				},
				{
					"name":"Ski complex",
					"children":[
					{
						"name":"PHATRDRAFT_33072 hypothetical protein\tK12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]"
					},
					{
						"name":"PHATRDRAFT_47896 hypothetical protein\tK12600 SKI3; superkiller protein 3"
					}
					]
				},
				{
					"name":"Ccr4-NOT complex",
					"children":[
					{
						"name":"PHATRDRAFT_42429 hypothetical protein\tK12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]"
					},
					{
						"name":"PHATR_10354 hypothetical protein\tK12604 CNOT1; CCR4-NOT transcription complex subunit 1"
					},
					{
						"name":"PHATR_18735 hypothetical protein\tK12604 CNOT1; CCR4-NOT transcription complex subunit 1"
					},
					{
						"name":"PHATRDRAFT_43176 hypothetical protein\tK12605 CNOT2; CCR4-NOT transcription complex subunit 2"
					},
					{
						"name":"PHATRDRAFT_9231 hypothetical protein\tK12580 CNOT3; CCR4-NOT transcription complex subunit 3"
					},
					{
						"name":"PHATRDRAFT_10102 hypothetical protein\tK10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]"
					},
					{
						"name":"PHATRDRAFT_9576 hypothetical protein\tK12581 CNOT7_8; CCR4-NOT transcription complex subunit 7\/8"
					},
					{
						"name":"PHATRDRAFT_54813 hypothetical protein\tK12606 RCD1; CCR4-NOT transcription complex subunit 9"
					},
					{
						"name":"PHATRDRAFT_43104 hypothetical protein\tK12607 CNOT10; CCR4-NOT transcription complex subunit 10"
					},
					{
						"name":"PHATRDRAFT_32559 hypothetical protein\tK12608 CAF16; CCR4-NOT complex subunit CAF16"
					}
					]
				},
				{
					"name":"Pan complex",
					"children":[
					{
						"name":"PHATRDRAFT_46460 hypothetical protein\tK12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]"
					},
					{
						"name":"PHATRDRAFT_50229 hypothetical protein\tK12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3"
					}
					]
				},
				{
					"name":"Other 3'-5' decay factors"
				}
				]
			},
			{
				"name":"Other degradation factors",
				"children":[
				{
					"name":"RNases"
				}
				]
			}
			]
		}
		]
	},
	{
		"name":"Prokaryotic type",
		"children":[
		{
			"name":"Bacterial mRNA degradation factors",
			"children":[
			{
				"name":"RNA degradosome components",
				"children":[
				{
					"name":"Ribonucreases"
				},
				{
					"name":"Helicases",
					"children":[
					{
						"name":"PHATRDRAFT_9529 hypothetical protein\tK03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]"
					},
					{
						"name":"PHATR_2089 hypothetical protein\tK03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]"
					}
					]
				},
				{
					"name":"Other RNA degradosome components",
					"children":[
					{
						"name":"PHATRDRAFT_56468 plastidic enolase\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]"
					},
					{
						"name":"PHATRDRAFT_bd1572 hypothetical protein\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]"
					},
					{
						"name":"PHATRDRAFT_bd1874 hypothetical protein\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]"
					},
					{
						"name":"PHATRDRAFT_20608 hypothetical protein\tK00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]"
					},
					{
						"name":"PHATRDRAFT_47690 PFK1; pyrophosphate-dependent phosphofructose kinase\tK00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]"
					},
					{
						"name":"PHATRDRAFT_50424 PFK_2; phosphofructokinase\tK00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]"
					},
					{
						"name":"PHATRDRAFT_51286 PFK_1; pyrophosphate-dependent phosphofructose kinase\tK00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]"
					}
					]
				}
				]
			},
			{
				"name":"Other RNA degradation factors",
				"children":[
				{
					"name":"Chaperones",
					"children":[
					{
						"name":"PHATRDRAFT_17633 Hsp70_1; hypothetical protein\tK04043 dnaK; molecular chaperone DnaK"
					},
					{
						"name":"PHATRDRAFT_24820 CPN60_1; mitochondria-targeted chaperonin\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]"
					},
					{
						"name":"PHATRDRAFT_41721 CPN60_2; nuclear-encoded-like protein of chloroplast gro\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]"
					}
					]
				},
				{
					"name":"Others"
				},
				{
					"name":"Bacterial Small RNA Regulators"
				}
				]
			}
			]
		},
		{
			"name":"Archeal mRNA degradation factors",
			"children":[
			{
				"name":"Exosome components",
				"children":[
				{
					"name":"Core exosome",
					"children":[
					{
						"name":"PHATRDRAFT_bd509 hypothetical protein\tK03679 RRP4; exosome complex component RRP4"
					},
					{
						"name":"PHATRDRAFT_37291 hypothetical protein\tK07573 CSL4; exosome complex component CSL4"
					}
					]
				},
				{
					"name":"Cofactors",
					"children":[
					{
						"name":"PHATRDRAFT_23286 hypothetical protein\tK11600 RRP41; exosome complex component RRP41"
					},
					{
						"name":"PHATRDRAFT_55141 RRP; ribosomal RNA processing protein\tK12589 RRP42; exosome complex component RRP42"
					}
					]
				},
				{
					"name":"Others"
				}
				]
			}
			]
		}
		]
	}
	]
}