{
	"name":"ret02035",
	"children":[
	{
		"name":"Flagellar system",
		"children":[
		{
			"name":"Chemotaxis proteins",
			"children":[
			{
				"name":"Two component system proteins",
				"children":[
				{
					"name":"RHE_CH00639 cheA; chemotaxis two-component sensor histidine kinase protein\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]"
				},
				{
					"name":"RHE_CH03522 putative chemotaxis two-component sensor histidine kinase protein\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]"
				},
				{
					"name":"RHE_CH00641 cheRch1; chemotaxis signal transduction protein\tK03408 cheW; purine-binding chemotaxis protein CheW"
				},
				{
					"name":"RHE_CH02831 cheW2; chemotaxis signal transduction protein\tK03408 cheW; purine-binding chemotaxis protein CheW"
				},
				{
					"name":"RHE_CH03517 cheW3; chemotaxis signal transduction protein\tK03408 cheW; purine-binding chemotaxis protein CheW"
				},
				{
					"name":"RHE_CH03521 cheW4; chemotaxis signal transduction protein\tK03408 cheW; purine-binding chemotaxis protein CheW"
				},
				{
					"name":"RHE_CH03853 cheW5; chemotaxis signal transduction protein\tK03408 cheW; purine-binding chemotaxis protein CheW"
				},
				{
					"name":"RHE_PD00097 hypothetical protein\tK03408 cheW; purine-binding chemotaxis protein CheW"
				},
				{
					"name":"RHE_CH03516 cheRch2; chemotaxis methyltransferase protein\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]"
				},
				{
					"name":"RHE_CH00643 cheY2; protein-glutamate methylesterase protein\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]"
				},
				{
					"name":"RHE_CH03515 cheBch2; chemotaxis-specific methylesterase protein\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]"
				},
				{
					"name":"RHE_PF00075 cheBf; protein-glutamate methylesterase protein\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]"
				},
				{
					"name":"RHE_PF00076 cheRf; chemotaxis methyltransferase protein\tK13924 cheBR; two-component system, chemotaxis family, CheB\/CheR fusion protein [EC:2.1.1.80 3.1.1.61]"
				},
				{
					"name":"RHE_CH00638 cheY1; chemotaxis two-component response regulator protein\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY"
				},
				{
					"name":"RHE_CH00644 cheD; chemotaxis two-component response regulator protein\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY"
				},
				{
					"name":"RHE_CH03335 probable two-component response regulator protein\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY"
				},
				{
					"name":"RHE_CH03523 cheY3; chemotaxis two-component response regulator protein\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY"
				}
				]
			},
			{
				"name":"MCPs",
				"children":[
				{
					"name":"RHE_CH00408 mcpX1; methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_CH00411 mcpV1; methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_CH00440 mcpT; methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_CH00532 mcpAch; methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_CH00636 mcpE; methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_CH00708 mcpZch1; methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_CH00709 mcpZch2; methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_CH00888 mcpV2; methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_CH00912 mcpU; methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_CH00974 mcpX2; methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_CH01161 mcpY; methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_CH01254 putative methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_CH02547 mcpV3; methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_CH02830 mcpW; methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_CH03477 probable methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_CH03518 putative methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_CH03519 putative methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_CH03520 putative methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_PC00153 mcpGc; methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_PD00136 methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_PF00178 probable methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_PF00299 mcpB; methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein"
				},
				{
					"name":"RHE_PF00451 mcpCf; methyl accepting chemotaxis protein\tK05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor"
				}
				]
			}
			]
		},
		{
			"name":"Flagellar assembly proteins",
			"children":[
			{
				"name":"Type-III secretion",
				"children":[
				{
					"name":"RHE_CH00656 fliI; H(+)-transporting ATP synthase, flagellum-specific protein\tK02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]"
				},
				{
					"name":"RHE_CH00667 fliP; flagellar biosynthesis transmembrane protein\tK02419 fliP; flagellar biosynthesis protein FliP"
				},
				{
					"name":"RHE_CH00685 fliQ; flagellar biosynthesis transmembrane protein\tK02420 fliQ; flagellar biosynthesis protein FliQ"
				},
				{
					"name":"RHE_CH00687 fliR; flagellar byosinthesis transmembrane protein\tK02421 fliR; flagellar biosynthesis protein FliR"
				},
				{
					"name":"RHE_CH00686 flhA; flagellar biosynthesis transmembrane protein\tK02400 flhA; flagellar biosynthesis protein FlhA"
				},
				{
					"name":"RHE_CH00650 flhB; flagellar biosynthesis transmembrane protein\tK02401 flhB; flagellar biosynthesis protein FlhB"
				}
				]
			},
			{
				"name":"C ring",
				"children":[
				{
					"name":"RHE_CH00651 fliG; flagellar motor switch protein\tK02410 fliG; flagellar motor switch protein FliG"
				},
				{
					"name":"RHE_CH00653 fliM; flagellar C-ring protein\tK02416 fliM; flagellar motor switch protein FliM"
				},
				{
					"name":"RHE_CH00652 fliN; flagellar motor switch protein\tK02417 fliN; flagellar motor switch protein FliN"
				}
				]
			},
			{
				"name":"M, S, P and L rings",
				"children":[
				{
					"name":"RHE_CH00646 fliF; flagellar M-ring protein\tK02409 fliF; flagellar M-ring protein FliF"
				},
				{
					"name":"RHE_CH00663 flgI; flagellar basal-body P-ring protein\tK02394 flgI; flagellar P-ring protein FlgI"
				},
				{
					"name":"RHE_CH00662 flgA; flagellar basal-body rod protein\tK02386 flgA; flagellar basal body P-ring formation protein FlgA"
				},
				{
					"name":"RHE_CH00665 flgH; flagellar L-ring protein\tK02393 flgH; flagellar L-ring protein FlgH"
				},
				{
					"name":"RHE_CH00666 fliL; flagellar biosynthesis transmembrane protein\tK02415 fliL; flagellar protein FliL"
				}
				]
			},
			{
				"name":"Rod and hook",
				"children":[
				{
					"name":"RHE_CH00660 fliE; flagellar hook-basal body protein\tK02408 fliE; flagellar hook-basal body complex protein FliE"
				},
				{
					"name":"RHE_CH00658 flgB; flagellar basal-body rod protein\tK02387 flgB; flagellar basal-body rod protein FlgB"
				},
				{
					"name":"RHE_CH00659 flgC; flagellar basal-body rod protein\tK02388 flgC; flagellar basal-body rod protein FlgC"
				},
				{
					"name":"RHE_CH00684 flgD; flagellar basal-body rod protein\tK02389 flgD; flagellar basal-body rod modification protein FlgD"
				},
				{
					"name":"RHE_CH00655 flgF; flagellar basal-body rod protein\tK02391 flgF; flagellar basal-body rod protein FlgF"
				},
				{
					"name":"RHE_CH00661 flgG; flagellar basal-body rod protein\tK02392 flgG; flagellar basal-body rod protein FlgG"
				},
				{
					"name":"RHE_CH00689 hypothetical conserved protein\tK02395 flgJ; peptidoglycan hydrolase FlgJ"
				},
				{
					"name":"RHE_CH00679 flgEch; flagellar hook protein\tK02390 flgE; flagellar hook protein FlgE"
				},
				{
					"name":"RHE_PF00171 flgEf; flagellar hook protein\tK02390 flgE; flagellar hook protein FlgE"
				},
				{
					"name":"RHE_CH00680 flgKch; flagellar hook-associated protein\tK02396 flgK; flagellar hook-associated protein 1"
				},
				{
					"name":"RHE_PF00172 flgKf; flagellar hook-associated protein\tK02396 flgK; flagellar hook-associated protein 1"
				},
				{
					"name":"RHE_CH00681 flgLch; flagellar hook-assosiated protein\tK02397 flgL; flagellar hook-associated protein 3 FlgL"
				},
				{
					"name":"RHE_PF00173 flgLf; flagellar hook-associated protein\tK02397 flgL; flagellar hook-associated protein 3 FlgL"
				}
				]
			},
			{
				"name":"H and T rings"
			},
			{
				"name":"Filament",
				"children":[
				{
					"name":"RHE_CH00669 flaCch1; flagellin C protein\tK02406 fliC; flagellin"
				},
				{
					"name":"RHE_CH00670 flaCch2; flagellin C protein\tK02406 fliC; flagellin"
				},
				{
					"name":"RHE_CH00671 flaCch3; flagellin C protein\tK02406 fliC; flagellin"
				},
				{
					"name":"RHE_CH00672 flaCch4; flagellin C protein\tK02406 fliC; flagellin"
				},
				{
					"name":"RHE_CH02811 flaCch5; flagellin C protein\tK02406 fliC; flagellin"
				},
				{
					"name":"RHE_PE00392 flaCe; flagellin C protein\tK02406 fliC; flagellin"
				}
				]
			},
			{
				"name":"Stator",
				"children":[
				{
					"name":"RHE_CH00654 motA; chemotaxis motility protein\tK02556 motA; chemotaxis protein MotA"
				},
				{
					"name":"RHE_CH00674 motB; chemotaxis motility protein\tK02557 motB; chemotaxis protein MotB"
				},
				{
					"name":"RHE_CH00675 motC; chemotaxis motility protein\tK10564 motC; chemotaxis protein MotC"
				},
				{
					"name":"RHE_CH00676 motD; chemotaxis motility protein\tK10565 motD; chemotaxis protein MotD"
				}
				]
			},
			{
				"name":"Others",
				"children":[
				{
					"name":"RHE_CH04006 probable amino acid ABC transporter, substrate-binding protein\tK02424 tcyA; L-cystine transport system substrate-binding protein"
				},
				{
					"name":"RHE_CH00682 flaF; flagellin synthesis regulator protein\tK06602 flaF; flagellar biosynthesis activator protein FlaF"
				},
				{
					"name":"RHE_CH00683 flbT; flagellin synthesis regulator (repressor) protein\tK06601 flbT; flagellar biosynthesis repressor protein FlbT"
				}
				]
			}
			]
		},
		{
			"name":"Archaeal flagellar assembly proteins"
		}
		]
	},
	{
		"name":"Pilus system",
		"children":[
		{
			"name":"Twitching motility proteins"
		},
		{
			"name":"Chemosensory pili system proteins"
		},
		{
			"name":"Positive phototactic motility proteins"
		},
		{
			"name":"Pilus assembly proteins",
			"children":[
			{
				"name":"RHE_CH00202 pilA; component of type IV pilus, pilin subunit protein\tK02651 flp; pilus assembly protein Flp\/PilA"
			},
			{
				"name":"RHE_CH00203 cpaA; prepilin peptidase protein\tK02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]"
			},
			{
				"name":"RHE_PE00156 hypothetical protein\tK02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]"
			},
			{
				"name":"RHE_PE00304 putative cpaA pilus assembly protein\tK02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]"
			},
			{
				"name":"RHE_CH00204 cpaB; pilus assembly protein\tK02279 cpaB; pilus assembly protein CpaB"
			},
			{
				"name":"RHE_PE00305 putative cpaB pilus assembly protein\tK02279 cpaB; pilus assembly protein CpaB"
			},
			{
				"name":"RHE_CH00205 cpaC; pilus assembly secretion protein\tK02280 cpaC; pilus assembly protein CpaC"
			},
			{
				"name":"RHE_PE00306 pilQ; cpaC pilus assembly Q protein\tK02280 cpaC; pilus assembly protein CpaC"
			},
			{
				"name":"RHE_CH00206 cpaD; pilus assembly protein\tK02281 cpaD; pilus assembly protein CpaD"
			},
			{
				"name":"RHE_CH00207 cpaE; pilus assembly protein, response regulator protein\tK02282 cpaE; pilus assembly protein CpaE"
			},
			{
				"name":"RHE_PE00311 putative pilus assembly protein\tK02282 cpaE; pilus assembly protein CpaE"
			},
			{
				"name":"RHE_CH00208 cpaF; pilus assembly secretion ATP-binding protein\tK02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]"
			},
			{
				"name":"RHE_PE00150 putative bacterial type II secretion system protein\tK02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]"
			},
			{
				"name":"RHE_PE00157 putative bacterial type II secretion system protein\tK02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]"
			},
			{
				"name":"RHE_PE00313 probable cpaF pilus assembly protein, ATPase CpaF\tK02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]"
			}
			]
		},
		{
			"name":"Fimbrial proteins"
		}
		]
	}
	]
}