{
	"name":"sega03000",
	"children":[
	{
		"name":"Eukaryotic type",
		"children":[
		{
			"name":"Basic leucine zipper (bZIP)",
			"children":[
			{
				"name":"AP-1(-like) components, Jun"
			},
			{
				"name":"AP-1(-like) components, Fos"
			},
			{
				"name":"AP-1(-like) components, Maf"
			},
			{
				"name":"AP-1(-like) components, NF-E2"
			},
			{
				"name":"AP-1(-like) components, Fungal regulators"
			},
			{
				"name":"AP-1(-like) components, CRE-BP\/ATF"
			},
			{
				"name":"CREB"
			},
			{
				"name":"C\/EBP-like factors"
			},
			{
				"name":"bZIP\/PAR"
			},
			{
				"name":"Plant bZIP factors"
			},
			{
				"name":"ZIP only"
			}
			]
		},
		{
			"name":"Basic helix-loop-helix (bHLH)",
			"children":[
			{
				"name":"Ubiquitous (class A) factors"
			},
			{
				"name":"Myogenic transcription factors"
			},
			{
				"name":"Achaete-Scute"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, Lymphoid factors"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, Mesodermal Twist-like factors"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, HEN"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, Mesp"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, Atonal"
			},
			{
				"name":"Tal\/Twist\/Atonal\/Hen, Pancreatic factors"
			},
			{
				"name":"Hairy, Hairy\/E(SPL)"
			},
			{
				"name":"Hairy, Fungal regulators"
			},
			{
				"name":"Factors with PAS domain"
			},
			{
				"name":"Yabby"
			},
			{
				"name":"INO"
			},
			{
				"name":"HLH domain only"
			}
			]
		},
		{
			"name":"Basic helix-loop-helix\/leucine zipper (bHLH-ZIP)",
			"children":[
			{
				"name":"Ubiquitous bHLH-ZIP factors"
			},
			{
				"name":"Cell cycle controlling factors, Myc"
			},
			{
				"name":"Cell cycle controlling factors, Mad\/Max"
			},
			{
				"name":"Other bHLH-ZIP factors"
			}
			]
		},
		{
			"name":"Other basic domains",
			"children":[
			{
				"name":"NF-1"
			},
			{
				"name":"RF-X"
			},
			{
				"name":"AP-2 (bHSH)"
			}
			]
		},
		{
			"name":"Zinc finger",
			"children":[
			{
				"name":"Cys4 thyroid hormone receptor-like"
			},
			{
				"name":"Cys4 hepatocyte nuclear factor 4-like"
			},
			{
				"name":"Cys4 estrogen receptor-like"
			},
			{
				"name":"Cys4 nerve growth factor IB-like"
			},
			{
				"name":"Cys4 Fushi tarazu-F1-like"
			},
			{
				"name":"Cys4 germ cell nuclear factor"
			},
			{
				"name":"Cys4 Knirps\/DAX1-like"
			},
			{
				"name":"Cys4 GATA-factors"
			},
			{
				"name":"Cys2His2 SP\/KLF family and related proteins"
			},
			{
				"name":"Cys2His2 GLI-like"
			},
			{
				"name":"Cys2His2 Snail"
			},
			{
				"name":"Cys2His2 BTB-ZF factors"
			},
			{
				"name":"Cys2His2 BED"
			},
			{
				"name":"Cys2His2 PRDM"
			},
			{
				"name":"Cys2His2 metabolic regulators in fungi"
			},
			{
				"name":"Cys2His2 others"
			},
			{
				"name":"Cys2HisCys zinc factors"
			},
			{
				"name":"Cys3His zinc factors"
			},
			{
				"name":"Cys2CysHis zinc factors"
			},
			{
				"name":"CXXC CpG-binding proteins",
				"children":[
				{
					"name":"SPUCDC_1865 dcm; DNA-cytosine methyltransferase\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]"
				}
				]
			},
			{
				"name":"Cys6 metabolic regulators in fungi"
			},
			{
				"name":"Other zinc fingers"
			}
			]
		},
		{
			"name":"Helix-turn-helix",
			"children":[
			{
				"name":"Homeo domain ANTP: HOXL"
			},
			{
				"name":"Homeo domain ANTP: NKL"
			},
			{
				"name":"Homeo domain Paired-related"
			},
			{
				"name":"Homeo domain LIM"
			},
			{
				"name":"Homeo domain POU"
			},
			{
				"name":"Homeo domain SINE"
			},
			{
				"name":"Homeo domain ZF"
			},
			{
				"name":"Homeo domain CUT"
			},
			{
				"name":"Homeo domain PROS"
			},
			{
				"name":"Homeo domain TALE"
			},
			{
				"name":"Homeo domain other"
			},
			{
				"name":"Fork head\/winged helix developmental regulators"
			},
			{
				"name":"Fork head\/winged helix tissue-specific regulators"
			},
			{
				"name":"Fork head\/winged helix cell cycle-controlling factors, E2F"
			},
			{
				"name":"Fork head\/winged helix cell cycle-controlling factors, DP"
			},
			{
				"name":"Fork head\/winged helix other regulators"
			},
			{
				"name":"Stork head\/winged helix factors"
			},
			{
				"name":"Heat shock factors"
			},
			{
				"name":"Tryptophan clusters Myb, Myb-factors"
			},
			{
				"name":"Tryptophan clusters Myb, Myb-like factors"
			},
			{
				"name":"Tryptophan clusters Ets-type"
			},
			{
				"name":"Tryptophan clusters interferon-regulating factors"
			},
			{
				"name":"TEA domain"
			},
			{
				"name":"ARID"
			}
			]
		},
		{
			"name":"beta-Scaffold factors with minor groove contacts",
			"children":[
			{
				"name":"RHR (Rel homology region) Rel\/Ankyrin"
			},
			{
				"name":"RHR (Rel homology region) Ankyrin only"
			},
			{
				"name":"RHR (Rel homology region) NF-AT"
			},
			{
				"name":"STAT"
			},
			{
				"name":"p53"
			},
			{
				"name":"MADS-box regulators of differentiation, MEF-2"
			},
			{
				"name":"MADS-box regulators of differentiation, Homeotic genes"
			},
			{
				"name":"MADS-box regulators of differentiation, Yeast regulators"
			},
			{
				"name":"MADS-box responders to external signals"
			},
			{
				"name":"SAND domain-containing proteins"
			},
			{
				"name":"TATA-binding proteins"
			},
			{
				"name":"HMG SOX"
			},
			{
				"name":"HMG TCF-1"
			},
			{
				"name":"HMG TOX"
			},
			{
				"name":"HMG2-related"
			},
			{
				"name":"UBF"
			},
			{
				"name":"Other HMG box factors"
			},
			{
				"name":"Heteromeric CCAAT factors"
			},
			{
				"name":"Grainyhead"
			},
			{
				"name":"Cold-shock domain factors, DbpA-like"
			},
			{
				"name":"Cold-shock domain factors, YB-1\/DbpB-like"
			},
			{
				"name":"Cold-shock domain factors, FRG Y2-like"
			},
			{
				"name":"Runt"
			},
			{
				"name":"MYRF"
			}
			]
		},
		{
			"name":"Other transcription factors",
			"children":[
			{
				"name":"HMGI(Y)"
			},
			{
				"name":"NUPR"
			},
			{
				"name":"Pocket domain Rb"
			},
			{
				"name":"Pocket domain CBP"
			},
			{
				"name":"T-box"
			},
			{
				"name":"DMRT"
			},
			{
				"name":"LRRFIP"
			},
			{
				"name":"TCP"
			},
			{
				"name":"AP2\/ERF"
			},
			{
				"name":"WRKY"
			},
			{
				"name":"LOB"
			},
			{
				"name":"GRAS"
			},
			{
				"name":"NAC"
			},
			{
				"name":"Copper-fist proteins fungal regulators"
			},
			{
				"name":"Others"
			}
			]
		}
		]
	},
	{
		"name":"Prokaryotic type",
		"children":[
		{
			"name":"Helix-turn-helix",
			"children":[
			{
				"name":"AraC family",
				"children":[
				{
					"name":"SPUCDC_0109 araC; arabinose operon regulatory protein\tK02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein"
				},
				{
					"name":"SPUCDC_1935 hpaA; 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein\tK02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein"
				},
				{
					"name":"SPUCDC_3604 rhaR; L-rhamnose operon transcriptional activator\tK02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR"
				},
				{
					"name":"SPUCDC_3605 rhaS; L-rhamnose operon regulatory protein\tK02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS"
				},
				{
					"name":"SPUCDC_1132 celD; putative cel operon repressor\tK03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon"
				},
				{
					"name":"SPUCDC_4273 adiY; putative AraC family regulatory protein\tK03755 adiY; AraC family transcriptional regulator, transcriptional activator of adiA"
				},
				{
					"name":"SPUCDC_0426 eutR; ethanolamine operon transcriptional regulator\tK04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator"
				},
				{
					"name":"SPUCDC_4243 soxS; regulatory protein SoxS\tK13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator"
				},
				{
					"name":"SPUCDC_1337 marA; multiple antibiotic resistance protein MarA\tK13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator"
				},
				{
					"name":"SPUCDC_4560 rob; right origin-binding protein\tK05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator"
				},
				{
					"name":"SPUCDC_2372 transcriptional activator RamA\tK18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator"
				},
				{
					"name":"SPUCDC_2384 putative araC-family transcriptional regulator\tK21746 rclR; AraC family transcriptional regulator, reactive chlorine species (RCS)-specific activator of rcl operon"
				},
				{
					"name":"SPUCDC_4275 melR; melibiose operon regulatory protein\tK23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein"
				},
				{
					"name":"SPUCDC_1085 yeaM; putative transcriptional regulator\tK25495 nimR; AraC family transcriptional regulator, regulator of nimT"
				},
				{
					"name":"SPUCDC_3170 putative AraC-family transcriptional regulator\tK13652 K13652; AraC family transcriptional regulator"
				},
				{
					"name":"SPUCDC_0626 ada; ADA regulatory protein\tK10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response \/ methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]"
				}
				]
			},
			{
				"name":"LysR family",
				"children":[
				{
					"name":"SPUCDC_2978 gcvA; regulatory protein for glycine cleavage pathway\tK03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator"
				},
				{
					"name":"SPUCDC_3502 ilvY; LysR-family regulatory protein for ilvC expression\tK02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC"
				},
				{
					"name":"SPUCDC_3455 hypothetical protein\tK03576 metR; LysR family transcriptional regulator, regulator for metE and metH"
				},
				{
					"name":"SPUCDC_0043 nhaR; transcriptional activator protein NhaR\tK03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA"
				},
				{
					"name":"SPUCDC_3519 oxyR; hydrogen peroxide-inducible regulon activator\tK04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator"
				},
				{
					"name":"SPUCDC_3050 iciA; Chromosome initiation inhibitor\tK05596 argP; LysR family transcriptional regulator, arginine and lysine transport system\/DNA replication regulator"
				},
				{
					"name":"SPUCDC_0122 leuO; putative activator protein in leuABCD operon\tK05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon"
				},
				{
					"name":"SPUCDC_3244 tdcA; TDC operon transcriptional activator\tK07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator"
				},
				{
					"name":"SPUCDC_2431 ybbS; putative lysR-family transcriptional regulator\tK10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon"
				},
				{
					"name":"SPUCDC_1526 cysB; cys regulon transcriptional activator\tK13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator"
				},
				{
					"name":"SPUCDC_3754 dsdC; D-serine deaminase activator\tK13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator"
				},
				{
					"name":"SPUCDC_2258 lysR-family transcriptional regulator\tK13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC"
				},
				{
					"name":"SPUCDC_2626 hypothetical protein\tK16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA"
				},
				{
					"name":"SPUCDC_1485 putative transcriptional regulator\tK18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC"
				},
				{
					"name":"SPUCDC_3363 yhcS; putative LysR-family transcriptional regulator\tK21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon"
				},
				{
					"name":"SPUCDC_3512 yifA; LysR-family transcriptional regulatory protein\tK23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator"
				}
				]
			},
			{
				"name":"DeoR family",
				"children":[
				{
					"name":"SPUCDC_2090 deoR; deoxyribose operon repressor\tK11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor"
				},
				{
					"name":"SPUCDC_3759 putative DeoR-family transcriptional regulator\tK11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor"
				},
				{
					"name":"SPUCDC_4043 glpR; glycerol-3-phosphate regulon repressor\tK02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor"
				},
				{
					"name":"SPUCDC_3257 galactitol utilization operon repressor\tK02436 gatR; DeoR family transcriptional regulator, galactitol utilization operon repressor"
				},
				{
					"name":"SPUCDC_2975 fucR; l-fucose operon activator\tK02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator"
				},
				{
					"name":"SPUCDC_2817 srlR; glucitol operon repressor\tK02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor"
				},
				{
					"name":"SPUCDC_4357 yjfQ; putative transcriptional regulator\tK03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor"
				},
				{
					"name":"SPUCDC_3632 yihW; putative DeoR-family transcriptional regulator\tK27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor"
				}
				]
			},
			{
				"name":"LacI family",
				"children":[
				{
					"name":"SPUCDC_0698 galS; mgl repressor and galactose ultrainduction factor\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor"
				},
				{
					"name":"SPUCDC_3008 galR; galactose operon repressor\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor"
				},
				{
					"name":"SPUCDC_3667 rbsR; ribose operon repressor\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor"
				},
				{
					"name":"SPUCDC_3890 xylR; xylose operon regulatory protein\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor"
				},
				{
					"name":"SPUCDC_3554 cytR; transcriptional repressor\tK05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG"
				},
				{
					"name":"SPUCDC_0126 fruR; fructose repressor\tK03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor"
				},
				{
					"name":"SPUCDC_4416 treR; trehalose operon repressor\tK03485 treR; LacI family transcriptional regulator, trehalose operon repressor"
				},
				{
					"name":"SPUCDC_1244 purR; purine nucleotide synthesis repressor\tK03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor"
				},
				{
					"name":"SPUCDC_3854 putative lacI family transcriptional regulator regulator\tK06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor"
				},
				{
					"name":"SPUCDC_4023 gntR; gluconate utilization operon repressor\tK06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor"
				},
				{
					"name":"SPUCDC_4443 idnR; regulatory protein\tK06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator"
				}
				]
			},
			{
				"name":"GntR family",
				"children":[
				{
					"name":"SPUCDC_2173 hutC; histidine utilization repressor\tK05836 hutC; GntR family transcriptional regulator, histidine utilization repressor"
				},
				{
					"name":"SPUCDC_3957 gntR family regulatory protein\tK03710 K03710; GntR family transcriptional regulator"
				},
				{
					"name":"SPUCDC_1621 fadR; fatty acid metabolism regulator protein\tK03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA"
				},
				{
					"name":"SPUCDC_0163 pdhR; pyruvate dehydrogenase complex repressor\tK05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex"
				},
				{
					"name":"SPUCDC_1358 putative regulatory protein\tK13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor"
				},
				{
					"name":"SPUCDC_4480 uxuR; uxu operon transcriptional regulator\tK13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor"
				},
				{
					"name":"SPUCDC_3857 lldR; putative L-lactate dehydrogenase operon regulator\tK14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator"
				},
				{
					"name":"SPUCDC_3722 dgoR; galactonate operon transcriptional repressor\tK19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor"
				},
				{
					"name":"SPUCDC_3336 yhcK; putative GntR-family transcriptional regulator\tK22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor"
				},
				{
					"name":"SPUCDC_3538 alanine racemase\tK00375 K00375; GntR family transcriptional regulator \/ MocR family aminotransferase"
				},
				{
					"name":"SPUCDC_1399 yncC; putative regulatory protein\tK13654 mcbR; GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator"
				},
				{
					"name":"SPUCDC_2774 ygaE; putative transcriptional regulator\tK15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator"
				},
				{
					"name":"SPUCDC_1327 ydfH; putative regulatory protein\tK22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor"
				}
				]
			},
			{
				"name":"TetR\/AcrR family",
				"children":[
				{
					"name":"SPUCDC_2473 acrR; putative acrAB operon repressor\tK03577 acrR; TetR\/AcrR family transcriptional regulator, acrAB operon repressor"
				},
				{
					"name":"SPUCDC_3818 ttk; putative TetR-family transcriptional regulator\tK05501 slmA; TetR\/AcrR family transcriptional regulator"
				},
				{
					"name":"SPUCDC_1252 ydhM; putative TetR-family transcriptional regulator\tK16137 nemR; TetR\/AcrR family transcriptional regulator, transcriptional repressor for nem operon"
				},
				{
					"name":"SPUCDC_3385 envR; TetR-family transcriptional regulator\tK18140 envR; TetR\/AcrR family transcriptional regulator, acrEF\/envCD operon repressor"
				},
				{
					"name":"SPUCDC_1014 ycfQ; putative TetR-family regulatory protein\tK22041 comR; TetR\/AcrR family transcriptional regulator, copper-responsive repressor"
				},
				{
					"name":"SPUCDC_3517 yijC; TetR-family trancriptional regulatory protein\tK22105 fabR; TetR\/AcrR family transcriptional regulator, fatty acid biosynthesis regulator"
				},
				{
					"name":"SPUCDC_2143 ybiH; putative tetR-family transcriptional regulator\tK23777 cecR; TetR\/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity"
				},
				{
					"name":"SPUCDC_2085 putative tetR-family transcriptional regulator\tK23778 rcdA; TetR\/AcrR family transcriptional regulator, regulator of biofilm formation and stress response"
				}
				]
			},
			{
				"name":"Lrp\/AsnC family",
				"children":[
				{
					"name":"SPUCDC_3677 asnC; regulatory protein\tK03718 asnC; Lrp\/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA"
				},
				{
					"name":"SPUCDC_2034 lrp; leucine-responsive regulatory protein\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein"
				},
				{
					"name":"SPUCDC_2491 ybaO; putative transcriptional regulator\tK05800 decR; Lrp\/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator"
				}
				]
			},
			{
				"name":"LuxR family",
				"children":[
				{
					"name":"SPUCDC_1824 sdiA; cell-division regulatory protein\tK07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA"
				},
				{
					"name":"SPUCDC_1856 rcsA; colanic acid capsullar biosynthesis activation protein A\tK07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor"
				},
				{
					"name":"SPUCDC_0941 csgD; csg operon transcriptional regulator protein\tK04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein"
				},
				{
					"name":"SPUCDC_4527 bglJ; conserved hypothetical regulatory protein\tK22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides"
				},
				{
					"name":"SPUCDC_4050 malT; MalT regulatory protein\tK03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein"
				}
				]
			},
			{
				"name":"MarR family",
				"children":[
				{
					"name":"SPUCDC_1338 marR; multiple antibiotic resistance protein MarR\tK03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR"
				},
				{
					"name":"SPUCDC_1259 slyA; transcriptional regulator\tK06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin"
				},
				{
					"name":"SPUCDC_2797 emrR; putative transcriptional regulator\tK15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB"
				},
				{
					"name":"SPUCDC_2904 putative regulatory protein\tK22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility"
				}
				]
			},
			{
				"name":"MerR family",
				"children":[
				{
					"name":"SPUCDC_2447 cueR; copper efflux regulator\tK19591 cueR; MerR family transcriptional regulator, copper efflux regulator"
				},
				{
					"name":"SPUCDC_4244 soxR; SoxR protein\tK13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR"
				},
				{
					"name":"SPUCDC_2605 putative transcriptional regulatory protein\tK19592 golS; MerR family transcriptional regulator, gold-responsive activator of gol and ges genes"
				},
				{
					"name":"SPUCDC_0730 yehV; putative transcriptional regulator\tK21089 mlrA; MerR family transcriptional regulator, activator of the csg genes"
				}
				]
			},
			{
				"name":"Fur family",
				"children":[
				{
					"name":"SPUCDC_2257 fur; ferric uptake regulation protein\tK03711 fur; Fur family transcriptional regulator, ferric uptake regulator"
				},
				{
					"name":"SPUCDC_4217 zur; zinc uptake regulation protein\tK09823 zur; Fur family transcriptional regulator, zinc uptake regulator"
				}
				]
			},
			{
				"name":"IclR family",
				"children":[
				{
					"name":"SPUCDC_4179 iclR; acetate operon repressor\tK13641 iclR; IclR family transcriptional regulator, acetate operon repressor"
				},
				{
					"name":"SPUCDC_2429 allR; negative regulator of allantoin and glyoxylate utilization operons\tK10973 allR; IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons"
				},
				{
					"name":"SPUCDC_1659 kdgR; transcriptional regulator KdgR\tK19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor"
				},
				{
					"name":"SPUCDC_3884 yiaJ; putative transcriptional regulator\tK21602 plaR; IclR family transcriptional regulator, regulator of plant utilization"
				}
				]
			},
			{
				"name":"CRP\/FNR family",
				"children":[
				{
					"name":"SPUCDC_4101 crp; cyclic AMP receptor protein,catabolite gene activator\tK10914 crp; CRP\/FNR family transcriptional regulator, cyclic AMP receptor protein"
				},
				{
					"name":"SPUCDC_1480 fnr; fumarate and nitrate reduction regulatory protein\tK01420 fnr; CRP\/FNR family transcriptional regulator, anaerobic regulatory protein"
				}
				]
			},
			{
				"name":"Rrf2 family",
				"children":[
				{
					"name":"SPUCDC_0331 hypothetical protein\tK13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor"
				},
				{
					"name":"SPUCDC_4343 hypothetical protein\tK13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor"
				}
				]
			},
			{
				"name":"ArsR family"
			},
			{
				"name":"XRE family",
				"children":[
				{
					"name":"SPUCDC_1416 ydcN; putative DNA-binding protein\tK23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization"
				}
				]
			},
			{
				"name":"PadR family"
			},
			{
				"name":"Other families",
				"children":[
				{
					"name":"SPUCDC_2121 transcriptional regulator\tK11924 mntR; DtxR family transcriptional regulator, manganese transport regulator"
				},
				{
					"name":"SPUCDC_1757 yebK; putative hex-regulon repressor\tK19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator"
				},
				{
					"name":"SPUCDC_3429 birA; bifunctional protein: biotin operon repressor and biotin-[acetyl-CoA carboxylase] synthetase\tK03524 birA; BirA family transcriptional regulator, biotin operon repressor \/ biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]"
				},
				{
					"name":"SPUCDC_3381 fis; Fis DNA-binding protein\tK03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein"
				},
				{
					"name":"SPUCDC_4557 trpR; putative trp operon repressor\tK03720 trpR; TrpR family transcriptional regulator, trp operon repressor"
				},
				{
					"name":"SPUCDC_2592 prpR; propionate catabolism operon regulatory protein\tK02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein"
				},
				{
					"name":"SPUCDC_3302 nlp; Ner-like regulatory protein\tK07724 ner; Ner family transcriptional regulator"
				},
				{
					"name":"SPUCDC_0115 hypothetical protein\tK11925 sgrR; SgrR family transcriptional regulator"
				},
				{
					"name":"SPUCDC_3696 hypothetical protein\tK11925 sgrR; SgrR family transcriptional regulator"
				},
				{
					"name":"SPUCDC_4554 nadR; conserved hypothetical transcriptional regulator\tK06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]"
				},
				{
					"name":"SPUCDC_3627 hypothetical protein\tK18831 higA; HTH-type transcriptional regulator \/ antitoxin HigA"
				},
				{
					"name":"SPUCDC_3775 putative NtrC-family transcriptional regulator\tK17473 dgaR; sigma-54 dependent transcriptional regulator, dga operon transcriptional activator"
				},
				{
					"name":"SPUCDC_4512 putative transcriptional regulatory protein\tK19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator"
				},
				{
					"name":"SPUCDC_2819 ygaA; putative sigma-54-dependent transriptional regulator\tK12266 norR; anaerobic nitric oxide reductase transcription regulator"
				},
				{
					"name":"SPUCDC_2842 fhlA; transcriptional activator of the formate hydrogenlyase system\tK15836 fhlA; formate hydrogenlyase transcriptional activator"
				},
				{
					"name":"SPUCDC_2183 modE; putative molybdenum transport protein ModE\tK02019 modE; molybdate transport system regulatory protein"
				},
				{
					"name":"SPUCDC_3622 putative DNA-binding protein\tK07726 K07726; putative transcriptional regulator"
				},
				{
					"name":"SPUCDC_3768 putative DNA-binding protein\tK07726 K07726; putative transcriptional regulator"
				},
				{
					"name":"SPUCDC_3904 yiaG; putative HTH-type transcriptional regulator\tK07726 K07726; putative transcriptional regulator"
				}
				]
			}
			]
		},
		{
			"name":"Ribbon-helix-helix",
			"children":[
			{
				"name":"CopG family",
				"children":[
				{
					"name":"SPUCDC_3977 nikR; nickel responsive regulator\tK07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator"
				}
				]
			},
			{
				"name":"Other families",
				"children":[
				{
					"name":"SPUCDC_3548 metJ; repressor of the methionine regulon\tK03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor"
				},
				{
					"name":"SPUCDC_1920 proline dehydrogenase\tK13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor \/ proline dehydrogenase \/ delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]"
				},
				{
					"name":"SPUCDC_4408 RelB protein\tK18918 relB; RHH-type transcriptional regulator, rel operon repressor \/ antitoxin RelB"
				}
				]
			}
			]
		},
		{
			"name":"Other transcription factors",
			"children":[
			{
				"name":"BglG family"
			},
			{
				"name":"Others",
				"children":[
				{
					"name":"SPUCDC_1443 hypothetical protein\tK23239 frmR; FrmR\/RcnR family transcriptional regulator, repressor of frmRAB operon"
				},
				{
					"name":"SPUCDC_2505 bolA; BolA protein\tK05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator"
				},
				{
					"name":"SPUCDC_3440 rfaH; transcriptional activator\tK05785 rfaH; transcriptional antiterminator RfaH"
				},
				{
					"name":"SPUCDC_3356 argR; arginine repressor\tK03402 argR; transcriptional regulator of arginine metabolism"
				},
				{
					"name":"SPUCDC_2269 nagC; N-acetylglucosamine repressor\tK02565 nagC; N-acetylglucosamine repressor"
				},
				{
					"name":"SPUCDC_1304 mlc; putative regulatory protein\tK15545 mlc; transcriptional regulator of PTS gene"
				},
				{
					"name":"SPUCDC_3864 mtlR; mannitol operon repressor\tK02562 mtlR; mannitol operon repressor"
				},
				{
					"name":"SPUCDC_1491 tyrR; transcriptional regulatory protein\tK03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport"
				},
				{
					"name":"SPUCDC_0317 cadC; transcriptional activator cadC\tK03765 cadC; transcriptional activator of cad operon"
				},
				{
					"name":"SPUCDC_2859 hilA; invasion protein regulator\tK22486 hilA; transcriptional regulator HilA, main transcriptional regulator of SPI1"
				},
				{
					"name":"SPUCDC_0390 gcvR; glycine cleavage system transcriptional repressor\tK03567 gcvR; glycine cleavage system transcriptional repressor"
				},
				{
					"name":"SPUCDC_1499 pspF; psp operon transcriptional activator PspF\tK03974 pspF; psp operon transcriptional activator"
				},
				{
					"name":"SPUCDC_1496 pspC; phage shock protein C\tK03973 pspC; phage shock protein C"
				},
				{
					"name":"SPUCDC_3577 ydeW; putative regulatory protein\tK11531 lsrR; lsr operon transcriptional repressor"
				},
				{
					"name":"SPUCDC_2334 rnk; regulator of nucleoside diphosphate kinase\tK06140 rnk; regulator of nucleoside diphosphate kinase"
				},
				{
					"name":"SPUCDC_0899 putative phage regulatory protein\tK07733 alpA; prophage regulatory protein"
				},
				{
					"name":"SPUCDC_3084 hypothetical protein\tK07735 algH; putative transcriptional regulator"
				},
				{
					"name":"SPUCDC_0073 caiF; transcriptional activator CaiF\tK08277 caiF; transcriptional activator CaiF"
				},
				{
					"name":"SPUCDC_0202 dksA; dosage-dependent dnaK suppressor protein\tK06204 dksA; RNA polymerase-binding transcription factor"
				},
				{
					"name":"SPUCDC_2538 hypothetical protein\tK07738 nrdR; transcriptional repressor NrdR"
				},
				{
					"name":"SPUCDC_2640 crl; curlin genes transcriptional activator\tK11926 crl; sigma factor-binding protein Crl"
				},
				{
					"name":"SPUCDC_4044 rtcR; transcriptional regulatory protein\tK14414 rtcR; transcriptional regulatory protein RtcR"
				},
				{
					"name":"SPUCDC_0127 hypothetical protein\tK03925 mraZ; transcriptional regulator MraZ"
				},
				{
					"name":"SPUCDC_2395 fimY; fimbriae Y protein\tK08088 fimY; fimbrial regulator"
				}
				]
			}
			]
		}
		]
	}
	]
}