{ "name":"smi00001", "children":[ { "name":"09100 Metabolism", "children":[ { "name":"09101 Carbohydrate metabolism", "children":[ { "name":"00010 Glycolysis \/ Gluconeogenesis [PATH:smi00010]", "children":[ { "name":"BN406_03292 glk; glucokinase\tK00845 glk; glucokinase [EC:2.7.1.2]" }, { "name":"BN406_00131 pgi; glucose-6-phosphate isomerase\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]" }, { "name":"BN406_02402 pgiA1; Putative glucose-6-phosphate isomerase 1\tK06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]" }, { "name":"BN406_05522 pgiA2; Putative glucose-6-phosphate isomerase 2\tK06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]" }, { "name":"BN406_02014 pfk; pyrophosphate--fructose-6-phosphate 1-phosphotransferase\tK00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]" }, { "name":"BN406_06461 cbbF; fructose-1,6-bisphosphatase\tK03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]" }, { "name":"BN406_02625 fbaB; fructose-bisphosphate aldolase class I protein\tK01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]" }, { "name":"BN406_06665 fda; Fructose-bisphosphate aldolase class 1\tK01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]" }, { "name":"BN406_05800 fba; Fructose-bisphosphate aldolase\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"BN406_06464 cbbA; Fructose-bisphosphate aldolase\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"BN406_01170 tpiA1; Triosephosphate isomerase 1\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]" }, { "name":"BN406_06677 tpiA; Triosephosphate isomerase\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]" }, { "name":"BN406_02621 gap; glyceraldehyde-3-phosphate dehydrogenase\tK00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]" }, { "name":"BN406_02623 pgk; phosphoglycerate kinase\tK00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]" }, { "name":"BN406_03295 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase\tK01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]" }, { "name":"BN406_01175 eno; phosphopyruvate hydratase\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]" }, { "name":"BN406_02647 pykA; pyruvate kinase\tK00873 PK; pyruvate kinase [EC:2.7.1.40]" }, { "name":"BN406_00588 ppdK; Pyruvate, phosphate dikinase\tK01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]" }, { "name":"BN406_01178 pdhA; Pyruvate dehydrogenase E1 component subunit alpha\tK00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]" }, { "name":"BN406_01179 pdhB; Pyruvate dehydrogenase E1 component subunit beta\tK00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]" }, { "name":"BN406_01180 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"BN406_06653 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"BN406_06766 acoC1; Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"BN406_06774 acoC3; Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"BN406_01183 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02792 lpdV; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02904 LPD2; Dihydrolipoyl dehydrogenase 2, mitochondrial\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_06654 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_01125 adhI; Alcohol dehydrogenase class-3\tK00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase \/ alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]" }, { "name":"BN406_06487 adhI; Alcohol dehydrogenase class-3\tK00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase \/ alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]" }, { "name":"BN406_00627 probabable alcohol dehydrogenase\tK13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]" }, { "name":"BN406_04098 adhA1; Alcohol dehydrogenase\tK13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]" }, { "name":"BN406_04429 adhA3; Alcohol dehydrogenase\tK13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]" }, { "name":"BN406_02549 adhC2; NADP-dependent alcohol dehydrogenase C 2\tK13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]" }, { "name":"BN406_02352 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03510 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03712 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_04757 aldA; Aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_05853 aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_02201 acoD; Acetaldehyde dehydrogenase 2\tK00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]" }, { "name":"BN406_02489 acsA3; probabable acetyl-CoA synthetase\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]" }, { "name":"BN406_03122 acsA2; Acetyl-coenzyme A synthetase 2\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]" }, { "name":"BN406_02981 galM; aldose 1-epimerase\tK01785 galM; aldose 1-epimerase [EC:5.1.3.3]" }, { "name":"BN406_05048 hypothetical protein\tK01785 galM; aldose 1-epimerase [EC:5.1.3.3]" }, { "name":"BN406_02703 pgm; Phosphoglucomutase\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"BN406_03179 pckA; phosphoenolpyruvate carboxykinase\tK01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]" } ] }, { "name":"00020 Citrate cycle (TCA cycle) [PATH:smi00020]", "children":[ { "name":"BN406_01240 gltA; type II citrate synthase\tK01647 CS; citrate synthase [EC:2.3.3.1]" }, { "name":"BN406_03030 acnA; Aconitate hydratase\tK27802 acnA; aconitate hydratase A \/ 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]" }, { "name":"BN406_01525 icd; Isocitrate dehydrogenase [NADP]\tK00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]" }, { "name":"BN406_02909 sucA; 2-oxoglutarate dehydrogenase E1 component\tK00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]" }, { "name":"BN406_02908 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex\tK00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]" }, { "name":"BN406_05114 dihydrolipoyllysine-residue succinyltransferase\tK00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]" }, { "name":"BN406_01183 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02792 lpdV; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02904 LPD2; Dihydrolipoyl dehydrogenase 2, mitochondrial\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_06654 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02910 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha\tK01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]" }, { "name":"BN406_02911 sucC; succinyl-CoA synthetase subunit beta\tK01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]" }, { "name":"BN406_02926 sdhA; Succinate dehydrogenase flavoprotein subunit\tK00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]" }, { "name":"BN406_02925 sdhB; Succinate dehydrogenase iron-sulfur subunit\tK00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]" }, { "name":"BN406_02928 sdhC; succinate dehydrogenase cytochrome B-556 subunit transmembrane protein\tK00241 sdhC; succinate dehydrogenase cytochrome b subunit" }, { "name":"BN406_02927 sdhD; succinate dehydrogenase membrane anchor subunit protein\tK00242 sdhD; succinate dehydrogenase membrane anchor subunit" }, { "name":"BN406_01593 fumC; Fumarate hydratase class II\tK01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]" }, { "name":"BN406_02912 mdh; malate dehydrogenase\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]" }, { "name":"BN406_03077 pyc; Pyruvate carboxylase\tK01958 PC; pyruvate carboxylase [EC:6.4.1.1]" }, { "name":"BN406_03179 pckA; phosphoenolpyruvate carboxykinase\tK01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]" }, { "name":"BN406_01178 pdhA; Pyruvate dehydrogenase E1 component subunit alpha\tK00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]" }, { "name":"BN406_01179 pdhB; Pyruvate dehydrogenase E1 component subunit beta\tK00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]" }, { "name":"BN406_01180 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"BN406_06653 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"BN406_06766 acoC1; Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"BN406_06774 acoC3; Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" } ] }, { "name":"00030 Pentose phosphate pathway [PATH:smi00030]", "children":[ { "name":"BN406_00131 pgi; glucose-6-phosphate isomerase\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]" }, { "name":"BN406_02402 pgiA1; Putative glucose-6-phosphate isomerase 1\tK06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]" }, { "name":"BN406_05522 pgiA2; Putative glucose-6-phosphate isomerase 2\tK06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]" }, { "name":"BN406_00319 zwf; glucose-6-phosphate 1-dehydrogenase\tK00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]" }, { "name":"BN406_00318 pgl; 6-phosphogluconolactonase\tK01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]" }, { "name":"BN406_01660 yqjI; 6-phosphogluconate dehydrogenase, decarboxylating 2\tK00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]" }, { "name":"BN406_01497 cbbE; Ribulose-phosphate 3-epimerase\tK01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]" }, { "name":"BN406_06468 cbbE; Ribulose-phosphate 3-epimerase\tK01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]" }, { "name":"BN406_02419 tkt2; Transketolase 2\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_02620 cbbT; Transketolase\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_04021 transketolase\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_04022 transketolase\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_06463 cbbT; Transketolase\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_06671 hypothetical protein\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_06672 Putative transketolase N-terminal section\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_06679 cbbT; Transketolase\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_02896 tal; putative transaldolase\tK00616 TALDO1; transaldolase [EC:2.2.1.2]" }, { "name":"BN406_06680 tal; putative transaldolase\tK00616 TALDO1; transaldolase [EC:2.2.1.2]" }, { "name":"BN406_01590 rpiA; ribose-5-phosphate isomerase A\tK01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]" }, { "name":"BN406_06301 ribose-5-phosphate isomerase B\tK01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]" }, { "name":"BN406_03240 putative phosphoketolase 1\tK01621 xfp; xylulose-5-phosphate\/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]" }, { "name":"BN406_04099 putative phosphoketolase 1\tK01621 xfp; xylulose-5-phosphate\/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]" }, { "name":"BN406_02408 deoC; Deoxyribose-phosphate aldolase\tK01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]" }, { "name":"BN406_05854 DERA; Putative deoxyribose-phosphate aldolase\tK01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]" }, { "name":"BN406_00050 rbsK; ribokinase\tK00852 rbsK; ribokinase [EC:2.7.1.15]" }, { "name":"BN406_06666 hypothetical protein\tK00852 rbsK; ribokinase [EC:2.7.1.15]" }, { "name":"BN406_03267 deoB; phosphopentomutase\tK01839 deoB; phosphopentomutase [EC:5.4.2.7]" }, { "name":"BN406_02703 pgm; Phosphoglucomutase\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"BN406_05821 phosphonate metabolism protein\/1,5-bisphosphokinase PhnN\tK05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]" }, { "name":"BN406_02198 prs; Ribose-phosphate pyrophosphokinase\tK00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]" }, { "name":"BN406_00317 edd; Phosphogluconate dehydratase\tK01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]" }, { "name":"BN406_02403 eda1; KHG\/KDPG aldolase\tK01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase \/ (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]" }, { "name":"BN406_02740 eda; KHG\/KDPG aldolase\tK01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase \/ (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]" }, { "name":"BN406_00638 gdh; Quinoprotein glucose dehydrogenase\tK00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]" }, { "name":"BN406_04976 gluconolactonase\tK01053 gnl; gluconolactonase [EC:3.1.1.17]" }, { "name":"BN406_06225 putative gluconolactonase precursor protein\tK01053 gnl; gluconolactonase [EC:3.1.1.17]" }, { "name":"BN406_03904 idnK; IdnK gluconate kinase IdnK\tK00851 idnK; gluconokinase [EC:2.7.1.12]" }, { "name":"BN406_05953 gntK; gluconokinase\tK00851 idnK; gluconokinase [EC:2.7.1.12]" }, { "name":"BN406_02256 kdgK; 2-dehydro-3-deoxygluconokinase\tK00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]" }, { "name":"BN406_03090 ttuD; Putative hydroxypyruvate reductase\tK11529 gck; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"BN406_04503 ttuD; Putative hydroxypyruvate reductase\tK11529 gck; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"BN406_05314 ttuD; Putative hydroxypyruvate reductase\tK11529 gck; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"BN406_02625 fbaB; fructose-bisphosphate aldolase class I protein\tK01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]" }, { "name":"BN406_06665 fda; Fructose-bisphosphate aldolase class 1\tK01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]" }, { "name":"BN406_05800 fba; Fructose-bisphosphate aldolase\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"BN406_06464 cbbA; Fructose-bisphosphate aldolase\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"BN406_06461 cbbF; fructose-1,6-bisphosphatase\tK03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]" }, { "name":"BN406_02014 pfk; pyrophosphate--fructose-6-phosphate 1-phosphotransferase\tK00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]" } ] }, { "name":"00040 Pentose and glucuronate interconversions [PATH:smi00040]", "children":[ { "name":"BN406_05911 hypothetical protein\tK01728 pel; pectate lyase [EC:4.2.2.2]" }, { "name":"BN406_05738 pectin degradation protein\tK26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]" }, { "name":"BN406_04964 kduI1; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 1\tK01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]" }, { "name":"BN406_05736 kduI2; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 2\tK01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]" }, { "name":"BN406_05737 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase\tK00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]" }, { "name":"BN406_05731 uxaC; glucuronate isomerase\tK01812 uxaC; glucuronate isomerase [EC:5.3.1.12]" }, { "name":"BN406_06232 uxuA; mannonate dehydratase\tK01686 uxuA; mannonate dehydratase [EC:4.2.1.8]" }, { "name":"BN406_05257 uxuB; D-mannonate oxidoreductase\tK00040 uxuB; fructuronate reductase [EC:1.1.1.57]" }, { "name":"BN406_00817 rkpK; UDP-glucose 6-dehydrogenase\tK00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]" }, { "name":"BN406_02665 exoN; UTP--glucose-1-phosphate uridylyltransferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]" }, { "name":"BN406_05584 exoN; UTP--glucose-1-phosphate uridylyltransferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]" }, { "name":"BN406_06186 L-xylulokinase\tK00880 lyxK; L-xylulokinase [EC:2.7.1.53]" }, { "name":"BN406_01497 cbbE; Ribulose-phosphate 3-epimerase\tK01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]" }, { "name":"BN406_06468 cbbE; Ribulose-phosphate 3-epimerase\tK01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]" }, { "name":"BN406_02409 putative carbohydrate kinase\tK00854 xylB; xylulokinase [EC:2.7.1.17]" }, { "name":"BN406_02410 pentose kinase\tK00854 xylB; xylulokinase [EC:2.7.1.17]" }, { "name":"BN406_02418 sugar kinase\tK00854 xylB; xylulokinase [EC:2.7.1.17]" }, { "name":"BN406_02751 xylB; Xylulose kinase\tK00854 xylB; xylulokinase [EC:2.7.1.17]" }, { "name":"BN406_02750 xylA; xylose isomerase\tK01805 xylA; xylose isomerase [EC:5.3.1.5]" }, { "name":"BN406_00243 sugar isomerase\tK01820 rhaA; L-rhamnose isomerase \/ sugar isomerase [EC:5.3.1.14 5.3.1.-]" }, { "name":"BN406_02374 Putative D-xylulose reductase\tK05351 E1.1.1.9; D-xylulose reductase [EC:1.1.1.9]" }, { "name":"BN406_05526 galactitol-1-phosphate 5-dehydrogenase\tK00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]" }, { "name":"BN406_06659 hypothetical protein\tK00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]" }, { "name":"BN406_04950 dihydroxy-acid dehydratase\tK22186 xylD; xylonate dehydratase [EC:4.2.1.82]" }, { "name":"BN406_06404 aldH; NADP-dependent fatty aldehyde dehydrogenase\tK13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]" }, { "name":"BN406_03966 aldHT; Aldehyde dehydrogenase, thermostable\tK22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]" }, { "name":"BN406_05489 aldHT; Aldehyde dehydrogenase, thermostable\tK22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]" }, { "name":"BN406_02287 Fggy; FGGY carbohydrate kinase domain-containing protein\tK00875 rbtK; D-ribulokinase [EC:2.7.1.47]" }, { "name":"BN406_02054 carbohydrate kinase\tK22935 XK1; D-ribulokinase [EC:2.7.1.47]" }, { "name":"BN406_02057 fucA1; L-fuculose phosphate aldolase\tK01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]" }, { "name":"BN406_06195 L-fuculose phosphate aldolase\tK01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]" } ] }, { "name":"00051 Fructose and mannose metabolism [PATH:smi00051]", "children":[ { "name":"BN406_05059 N-acylglucosamine 2-epimerase family protein\tK29027 E5.3.1.7; mannose isomerase [EC:5.3.1.7]" }, { "name":"BN406_00130 frk; Fructokinase\tK00847 E2.7.1.4; fructokinase [EC:2.7.1.4]" }, { "name":"BN406_02839 mak; Fructokinase\tK00847 E2.7.1.4; fructokinase [EC:2.7.1.4]" }, { "name":"BN406_02837 pmi; Mannose-6-phosphate isomerase\tK28465 pmi; mannose-6-phosphate isomerase [EC:5.3.1.8]" }, { "name":"BN406_02057 fucA1; L-fuculose phosphate aldolase\tK01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]" }, { "name":"BN406_06195 L-fuculose phosphate aldolase\tK01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]" }, { "name":"BN406_03154 pld1; Pyridoxal 4-dehydrogenase\tK00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]" }, { "name":"BN406_04502 pld1; Pyridoxal 4-dehydrogenase\tK00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]" }, { "name":"BN406_06705 putative oxidoreductase\tK00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]" }, { "name":"BN406_00122 hypothetical protein\tK02431 fucU; L-fucose mutarotase [EC:5.1.3.29]" }, { "name":"BN406_05852 transporter\tK02431 fucU; L-fucose mutarotase [EC:5.1.3.29]" }, { "name":"BN406_05958 enosf1; Mitochondrial enolase superfamily member 1\tK18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]" }, { "name":"BN406_05960 Bdh2; 3-hydroxybutyrate dehydrogenase type 2\tK18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434]" }, { "name":"BN406_05959 Ureidoglycolate lyase\tK18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]" }, { "name":"BN406_00243 sugar isomerase\tK01820 rhaA; L-rhamnose isomerase \/ sugar isomerase [EC:5.3.1.14 5.3.1.-]" }, { "name":"BN406_02014 pfk; pyrophosphate--fructose-6-phosphate 1-phosphotransferase\tK00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]" }, { "name":"BN406_06461 cbbF; fructose-1,6-bisphosphatase\tK03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]" }, { "name":"BN406_05526 galactitol-1-phosphate 5-dehydrogenase\tK00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]" }, { "name":"BN406_06659 hypothetical protein\tK00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]" }, { "name":"BN406_02290 polS; Sorbitol dehydrogenase\tK21620 gdh; galactitol 2-dehydrogenase \/ sorbitol dehydrogenase [EC:1.1.1.16 1.1.1.-]" }, { "name":"BN406_02394 oxidoreductase\tK21620 gdh; galactitol 2-dehydrogenase \/ sorbitol dehydrogenase [EC:1.1.1.16 1.1.1.-]" }, { "name":"BN406_02416 oxidoreductase\tK21620 gdh; galactitol 2-dehydrogenase \/ sorbitol dehydrogenase [EC:1.1.1.16 1.1.1.-]" }, { "name":"BN406_02750 xylA; xylose isomerase\tK01805 xylA; xylose isomerase [EC:5.3.1.5]" }, { "name":"BN406_02289 mtlK; Mannitol 2-dehydrogenase\tK00045 mtlK; mannitol 2-dehydrogenase [EC:1.1.1.67]" }, { "name":"BN406_02625 fbaB; fructose-bisphosphate aldolase class I protein\tK01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]" }, { "name":"BN406_06665 fda; Fructose-bisphosphate aldolase class 1\tK01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]" }, { "name":"BN406_05800 fba; Fructose-bisphosphate aldolase\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"BN406_06464 cbbA; Fructose-bisphosphate aldolase\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"BN406_01170 tpiA1; Triosephosphate isomerase 1\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]" }, { "name":"BN406_06677 tpiA; Triosephosphate isomerase\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]" }, { "name":"BN406_03000 sugar kinase\tK00881 alsK; allose kinase [EC:2.7.1.55]" }, { "name":"BN406_06301 ribose-5-phosphate isomerase B\tK01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]" }, { "name":"BN406_03175 IIA component of PTS system protein\tK02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]" }, { "name":"BN406_05779 HAD superfamily hydrolase\tK19270 hxpA; mannitol-1-\/sugar-\/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]" } ] }, { "name":"00052 Galactose metabolism [PATH:smi00052]", "children":[ { "name":"BN406_02981 galM; aldose 1-epimerase\tK01785 galM; aldose 1-epimerase [EC:5.1.3.3]" }, { "name":"BN406_05048 hypothetical protein\tK01785 galM; aldose 1-epimerase [EC:5.1.3.3]" }, { "name":"BN406_00190 exoB; UDP-glucose 4-epimerase\tK01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]" }, { "name":"BN406_05602 exoB1; UDP-glucose 4-epimerase\tK01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]" }, { "name":"BN406_02665 exoN; UTP--glucose-1-phosphate uridylyltransferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]" }, { "name":"BN406_05584 exoN; UTP--glucose-1-phosphate uridylyltransferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]" }, { "name":"BN406_02703 pgm; Phosphoglucomutase\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"BN406_03292 glk; glucokinase\tK00845 glk; glucokinase [EC:2.7.1.2]" }, { "name":"BN406_05132 lacZ; Beta-galactosidase\tK01190 lacZ; beta-galactosidase [EC:3.2.1.23]" }, { "name":"BN406_05579 lacZ2; beta-galactosidase\tK12308 bgaB; beta-galactosidase [EC:3.2.1.23]" }, { "name":"BN406_06097 UDP-galactopyranose mutase\tK01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]" }, { "name":"BN406_05140 melA1; Alpha-galactosidase\tK07406 melA; alpha-galactosidase [EC:3.2.1.22]" }, { "name":"BN406_05145 melA3; Alpha-galactosidase\tK07406 melA; alpha-galactosidase [EC:3.2.1.22]" }, { "name":"BN406_02290 polS; Sorbitol dehydrogenase\tK21620 gdh; galactitol 2-dehydrogenase \/ sorbitol dehydrogenase [EC:1.1.1.16 1.1.1.-]" }, { "name":"BN406_02394 oxidoreductase\tK21620 gdh; galactitol 2-dehydrogenase \/ sorbitol dehydrogenase [EC:1.1.1.16 1.1.1.-]" }, { "name":"BN406_02416 oxidoreductase\tK21620 gdh; galactitol 2-dehydrogenase \/ sorbitol dehydrogenase [EC:1.1.1.16 1.1.1.-]" }, { "name":"BN406_05712 fructokinase\tK21621 fk; tagatose kinase [EC:2.7.1.101]" }, { "name":"BN406_05713 sugar kinase\tK21622 tag6PK; D-tagatose 6-phosphate 4-epimerase [EC:5.1.3.40]" }, { "name":"BN406_00892 gal; Galactose 1-dehydrogenase\tK00035 gal; D-galactose 1-dehydrogenase [EC:1.1.1.48]" }, { "name":"BN406_00480 oxidoreductase\tK22215 galD; galactose dehydrogenase [EC:1.1.1.48 1.1.1.120]" }, { "name":"BN406_03692 mandelate racemase\/muconate lactonizing protein\tK01684 dgoD; galactonate dehydratase [EC:4.2.1.6]" }, { "name":"BN406_06173 dgoD; D-galactonate dehydratase\tK01684 dgoD; galactonate dehydratase [EC:4.2.1.6]" }, { "name":"BN406_00479 dgoK1; 2-dehydro-3-deoxygalactonokinase\tK00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]" }, { "name":"BN406_00478 dgoA; probabable 2-dehydro-3-deoxy-6-phosphogalactonate aldolase\tK01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]" }, { "name":"BN406_00314 aglA1; putative alpha-glucosidase\tK01187 malZ; alpha-glucosidase [EC:3.2.1.20]" }, { "name":"BN406_02255 aglA3; putative alpha-glucosidase\tK01187 malZ; alpha-glucosidase [EC:3.2.1.20]" } ] }, { "name":"00053 Ascorbate and aldarate metabolism [PATH:smi00053]", "children":[ { "name":"BN406_00817 rkpK; UDP-glucose 6-dehydrogenase\tK00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]" }, { "name":"BN406_04976 gluconolactonase\tK01053 gnl; gluconolactonase [EC:3.1.1.17]" }, { "name":"BN406_06225 putative gluconolactonase precursor protein\tK01053 gnl; gluconolactonase [EC:3.1.1.17]" }, { "name":"BN406_03154 pld1; Pyridoxal 4-dehydrogenase\tK00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]" }, { "name":"BN406_04502 pld1; Pyridoxal 4-dehydrogenase\tK00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]" }, { "name":"BN406_06705 putative oxidoreductase\tK00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]" }, { "name":"BN406_00818 lspL; UDP-glucuronate 5'-epimerase\tK08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]" }, { "name":"BN406_06186 L-xylulokinase\tK00880 lyxK; L-xylulokinase [EC:2.7.1.53]" }, { "name":"BN406_02352 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03510 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03712 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_04757 aldA; Aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_05853 aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_05060 glucarate dehydratase\tK01706 gudD; glucarate dehydratase [EC:4.2.1.40]" }, { "name":"BN406_05490 dihydroxy-acid dehydratase\tK13875 araC; L-arabonate dehydrase [EC:4.2.1.25]" }, { "name":"BN406_06404 aldH; NADP-dependent fatty aldehyde dehydrogenase\tK13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]" }, { "name":"BN406_03965 putative 5-dehydro-4-deoxyglucarate dehydratase\tK01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41]" }, { "name":"BN406_04523 putative 5-dehydro-4-deoxyglucarate dehydratase\tK01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41]" }, { "name":"BN406_03241 hypothetical protein\tK18981 udh; uronate dehydrogenase [EC:1.1.1.203]" } ] }, { "name":"00500 Starch and sucrose metabolism [PATH:smi00500]", "children":[ { "name":"BN406_00314 aglA1; putative alpha-glucosidase\tK01187 malZ; alpha-glucosidase [EC:3.2.1.20]" }, { "name":"BN406_02255 aglA3; putative alpha-glucosidase\tK01187 malZ; alpha-glucosidase [EC:3.2.1.20]" }, { "name":"BN406_02665 exoN; UTP--glucose-1-phosphate uridylyltransferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]" }, { "name":"BN406_05584 exoN; UTP--glucose-1-phosphate uridylyltransferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]" }, { "name":"BN406_02747 beta-glucosidase\tK05350 bglB; beta-glucosidase [EC:3.2.1.21]" }, { "name":"BN406_04101 glycosyltransferase\tK00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20]" }, { "name":"BN406_05437 rfbF; Glucose-1-phosphate cytidylyltransferase\tK00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]" }, { "name":"BN406_02701 glgC; Glucose-1-phosphate adenylyltransferase\tK00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]" }, { "name":"BN406_02702 glgA1; Glycogen synthase 1\tK00703 glgA; starch synthase [EC:2.4.1.21]" }, { "name":"BN406_05289 glgA2; Glycogen synthase 2\tK00703 glgA; starch synthase [EC:2.4.1.21]" }, { "name":"BN406_02700 glgB; 1,4-alpha-glucan branching enzyme GlgB\tK00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]" }, { "name":"BN406_02699 glgP; glycogen phosphorylase\tK00688 PYG; glycogen phosphorylase [EC:2.4.1.1]" }, { "name":"BN406_02704 glgX; Glycogen debranching enzyme\tK02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]" }, { "name":"BN406_06557 maltose alpha-D-glucosyltransferase\tK05343 treS; maltose alpha-D-glucosyltransferase \/ alpha-amylase [EC:5.4.99.16 3.2.1.1]" }, { "name":"BN406_05418 glgX; Glycogen operon protein GlgX homolog\tK01214 ISA; isoamylase [EC:3.2.1.68]" }, { "name":"BN406_05220 malto-oligosyltrehalose synthase\tK06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]" }, { "name":"BN406_05417 malto-oligosyltrehalose trehalohydrolase\tK01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]" }, { "name":"BN406_04951 otsA; OtsA trehalose-6-phosphate synthase\tK00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]" }, { "name":"BN406_02703 pgm; Phosphoglucomutase\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"BN406_03292 glk; glucokinase\tK00845 glk; glucokinase [EC:2.7.1.2]" }, { "name":"BN406_00131 pgi; glucose-6-phosphate isomerase\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]" }, { "name":"BN406_02402 pgiA1; Putative glucose-6-phosphate isomerase 1\tK06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]" }, { "name":"BN406_05522 pgiA2; Putative glucose-6-phosphate isomerase 2\tK06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]" }, { "name":"BN406_00130 frk; Fructokinase\tK00847 E2.7.1.4; fructokinase [EC:2.7.1.4]" }, { "name":"BN406_02839 mak; Fructokinase\tK00847 E2.7.1.4; fructokinase [EC:2.7.1.4]" } ] }, { "name":"00620 Pyruvate metabolism [PATH:smi00620]", "children":[ { "name":"BN406_02489 acsA3; probabable acetyl-CoA synthetase\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]" }, { "name":"BN406_03122 acsA2; Acetyl-coenzyme A synthetase 2\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]" }, { "name":"BN406_01178 pdhA; Pyruvate dehydrogenase E1 component subunit alpha\tK00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]" }, { "name":"BN406_01179 pdhB; Pyruvate dehydrogenase E1 component subunit beta\tK00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]" }, { "name":"BN406_01180 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"BN406_06653 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"BN406_06766 acoC1; Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"BN406_06774 acoC3; Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"BN406_01183 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02792 lpdV; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02904 LPD2; Dihydrolipoyl dehydrogenase 2, mitochondrial\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_06654 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_00627 probabable alcohol dehydrogenase\tK13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]" }, { "name":"BN406_04098 adhA1; Alcohol dehydrogenase\tK13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]" }, { "name":"BN406_04429 adhA3; Alcohol dehydrogenase\tK13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]" }, { "name":"BN406_01125 adhI; Alcohol dehydrogenase class-3\tK00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase \/ alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]" }, { "name":"BN406_06487 adhI; Alcohol dehydrogenase class-3\tK00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase \/ alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]" }, { "name":"BN406_02549 adhC2; NADP-dependent alcohol dehydrogenase C 2\tK13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]" }, { "name":"BN406_04094 ackA; Acetate kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]" }, { "name":"BN406_05808 ackA; Acetate kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]" }, { "name":"BN406_04093 pta1; Phosphate acetyltransferase\tK00625 pta; phosphate acetyltransferase [EC:2.3.1.8]" }, { "name":"BN406_04904 pta3; Phosphate acetyltransferase\tK00625 pta; phosphate acetyltransferase [EC:2.3.1.8]" }, { "name":"BN406_05692 pta; Phosphate acetyltransferase\tK00625 pta; phosphate acetyltransferase [EC:2.3.1.8]" }, { "name":"BN406_06802 malic enzyme\tK00625 pta; phosphate acetyltransferase [EC:2.3.1.8]" }, { "name":"BN406_02647 pykA; pyruvate kinase\tK00873 PK; pyruvate kinase [EC:2.7.1.40]" }, { "name":"BN406_02540 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha\tK01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]" }, { "name":"BN406_01053 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit\tK02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein" }, { "name":"BN406_01052 accC; Biotin carboxylase\tK01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]" }, { "name":"BN406_03165 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta\tK01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]" }, { "name":"BN406_06793 bccA; Acetyl-\/propionyl-coenzyme A carboxylase alpha chain\tK11263 bccA; acetyl-CoA\/propionyl-CoA\/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]" }, { "name":"BN406_05204 acylphosphatase\tK01512 acyP; acylphosphatase [EC:3.6.1.7]" }, { "name":"BN406_02352 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03510 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03712 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_04757 aldA; Aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_05853 aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_02201 acoD; Acetaldehyde dehydrogenase 2\tK00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]" }, { "name":"BN406_03100 acyl-COA transferase\tK01026 pct; propionate CoA-transferase [EC:2.8.3.1]" }, { "name":"BN406_04505 acyl-CoA transferase\tK01026 pct; propionate CoA-transferase [EC:2.8.3.1]" }, { "name":"BN406_00100 lldD2; L-lactate dehydrogenase (cytochrome) protein\tK29125 lldD; L-lactate dehydrogenase (quinone) [EC:1.1.5.15]" }, { "name":"BN406_03638 lldD; L-lactate dehydrogenase [cytochrome]\tK29125 lldD; L-lactate dehydrogenase (quinone) [EC:1.1.5.15]" }, { "name":"BN406_05529 lldD; L-lactate dehydrogenase [cytochrome]\tK29125 lldD; L-lactate dehydrogenase (quinone) [EC:1.1.5.15]" }, { "name":"BN406_06561 acetolactate synthase\tK00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]" }, { "name":"BN406_01960 LDHD; putative D-lactate dehydrogenase, mitochondrial\tK00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]" }, { "name":"BN406_01460 gloA; lactoylglutathione lyase\tK01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]" }, { "name":"BN406_06741 glyoxalase I\tK01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]" }, { "name":"BN406_02182 ycbL; putative protein ycbL\tK01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]" }, { "name":"BN406_02522 gloB; Hydroxyacylglutathione hydrolase\tK01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]" }, { "name":"BN406_03285 hydroxyacid dehydrogenase\tK12972 ghrA; glyoxylate\/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]" }, { "name":"BN406_04755 hydroxypyruvate reductase\tK12972 ghrA; glyoxylate\/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]" }, { "name":"BN406_00027 tme; NADP-dependent malic enzyme\tK00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]" }, { "name":"BN406_01570 dme; NAD-dependent malic enzyme\tK00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]" }, { "name":"BN406_03077 pyc; Pyruvate carboxylase\tK01958 PC; pyruvate carboxylase [EC:6.4.1.1]" }, { "name":"BN406_02912 mdh; malate dehydrogenase\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]" }, { "name":"BN406_01593 fumC; Fumarate hydratase class II\tK01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]" }, { "name":"BN406_03179 pckA; phosphoenolpyruvate carboxykinase\tK01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]" }, { "name":"BN406_00588 ppdK; Pyruvate, phosphate dikinase\tK01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]" }, { "name":"BN406_03196 glcB; malate synthase G\tK01638 aceB; malate synthase [EC:2.3.3.9]" }, { "name":"BN406_00166 fadA; Putative acyltransferase Rv0859\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_00541 vraB; Putative acetyl-CoA C-acetyltransferase vraB\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_01442 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_03063 phbA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_04528 thlA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_00852 putative AIPM\/Hcit synthase family transferase aq_356\tK01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]" }, { "name":"BN406_02230 leuA; 2-isopropylmalate synthase\tK01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]" } ] }, { "name":"00630 Glyoxylate and dicarboxylate metabolism [PATH:smi00630]", "children":[ { "name":"BN406_00337 aceA; isocitrate lyase\tK01637 ICL; isocitrate\/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]" }, { "name":"BN406_03196 glcB; malate synthase G\tK01638 aceB; malate synthase [EC:2.3.3.9]" }, { "name":"BN406_02912 mdh; malate dehydrogenase\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]" }, { "name":"BN406_01240 gltA; type II citrate synthase\tK01647 CS; citrate synthase [EC:2.3.3.1]" }, { "name":"BN406_03030 acnA; Aconitate hydratase\tK27802 acnA; aconitate hydratase A \/ 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]" }, { "name":"BN406_02489 acsA3; probabable acetyl-CoA synthetase\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]" }, { "name":"BN406_03122 acsA2; Acetyl-coenzyme A synthetase 2\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]" }, { "name":"BN406_00166 fadA; Putative acyltransferase Rv0859\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_00541 vraB; Putative acetyl-CoA C-acetyltransferase vraB\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_01442 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_03063 phbA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_04528 thlA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_03062 phbB; Acetoacetyl-CoA reductase\tK00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]" }, { "name":"BN406_01017 methylmalonyl-CoA epimerase\tK05606 MCEE; methylmalonyl-CoA\/ethylmalonyl-CoA epimerase [EC:5.1.99.1]" }, { "name":"BN406_05250 Pcca; Propionyl-CoA carboxylase alpha chain, mitochondrial\tK01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]" }, { "name":"BN406_05251 PCCB; Propionyl-CoA carboxylase beta chain, mitochondrial\tK01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]" }, { "name":"BN406_06793 bccA; Acetyl-\/propionyl-coenzyme A carboxylase alpha chain\tK11263 bccA; acetyl-CoA\/propionyl-CoA\/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]" }, { "name":"BN406_05249 bhbA; methylmalonyl-CoA mutase\tK01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]" }, { "name":"BN406_06800 D-threonine aldolase\tK18425 dhaa; 3-hydroxy-D-aspartate aldolase [EC:4.1.3.41]" }, { "name":"BN406_06799 srr; putative serine racemase\tK28180 bhcB; (3S)-3-hydroxy-D-aspartate dehydratase [EC:4.2.1.184]" }, { "name":"BN406_06801 ocd3; ornithine cyclodeaminase\tK28178 bhcD; iminosuccinate reductase [EC:1.4.1.29]" }, { "name":"BN406_06798 sgaA; Serine--glyoxylate aminotransferase\tK28179 bhcA; glycine---oxaloacetate transaminase [EC:2.6.1.35]" }, { "name":"BN406_00434 glcD; Glycolate oxidase subunit glcD\tK00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]" }, { "name":"BN406_06794 glcD; Glycolate oxidase subunit glcD\tK00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]" }, { "name":"BN406_00435 glcE; glycolate oxidase subunit protein\tK11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]" }, { "name":"BN406_06795 hypothetical protein\tK11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]" }, { "name":"BN406_00436 hypothetical protein\tK11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]" }, { "name":"BN406_06796 hypothetical protein\tK11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]" }, { "name":"BN406_00421 katA; Catalase A\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"BN406_05126 katE; Catalase C\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"BN406_03304 gyaR3; Glyoxylate reductase\tK00015 gyaR; glyoxylate reductase [EC:1.1.1.26]" }, { "name":"BN406_03285 hydroxyacid dehydrogenase\tK12972 ghrA; glyoxylate\/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]" }, { "name":"BN406_04755 hydroxypyruvate reductase\tK12972 ghrA; glyoxylate\/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]" }, { "name":"BN406_00467 hypothetical protein\tK01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]" }, { "name":"BN406_01119 gph2; phosphoglycolate phosphatase\tK01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]" }, { "name":"BN406_01591 gph; Phosphoglycolate phosphatase\tK01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]" }, { "name":"BN406_06465 cbbL; Ribulose bisphosphate carboxylase large chain\tK01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]" }, { "name":"BN406_06466 cbbS; ribulose-1,5-bisphosphate carboxylase small subunit protein\tK01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]" }, { "name":"BN406_03708 aminotransferase, class V superfamily\tK00830 AGXT; alanine-glyoxylate transaminase \/ serine-glyoxylate transaminase \/ serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]" }, { "name":"BN406_04551 Agxt; Serine--pyruvate aminotransferase, mitochondrial\tK00830 AGXT; alanine-glyoxylate transaminase \/ serine-glyoxylate transaminase \/ serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]" }, { "name":"BN406_00321 glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_01379 glnA; Glutamine synthetase 1\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_02037 hypothetical protein\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_02355 glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_02429 glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_03224 glnT; Glutamine synthetase 3\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_05261 glnII; Glutamine synthetase 2\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_00943 glyA1; Serine hydroxymethyltransferase 1\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" }, { "name":"BN406_01279 gcvP; glycine dehydrogenase\tK00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]" }, { "name":"BN406_01281 gcvT; Aminomethyltransferase, mitochondrial\tK00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]" }, { "name":"BN406_01183 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02792 lpdV; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02904 LPD2; Dihydrolipoyl dehydrogenase 2, mitochondrial\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_06654 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_01280 gcvH; glycine cleavage system protein H\tK02437 gcvH; glycine cleavage system H protein" }, { "name":"BN406_05311 gcl; Glyoxylate carboligase\tK01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]" }, { "name":"BN406_05312 hyi; Hydroxypyruvate isomerase\tK01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]" }, { "name":"BN406_04949 2-hydroxy-3-oxopropionate reductase\tK00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]" }, { "name":"BN406_05313 glxR; 2-hydroxy-3-oxopropionate reductase\tK00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]" }, { "name":"BN406_03090 ttuD; Putative hydroxypyruvate reductase\tK11529 gck; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"BN406_04503 ttuD; Putative hydroxypyruvate reductase\tK11529 gck; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"BN406_05314 ttuD; Putative hydroxypyruvate reductase\tK11529 gck; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"BN406_04758 ycsA; putative tartrate dehydrogenase\/decarboxylase\tK07246 ttuC; tartrate dehydrogenase\/decarboxylase \/ D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]" }, { "name":"BN406_02403 eda1; KHG\/KDPG aldolase\tK01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase \/ (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]" }, { "name":"BN406_02740 eda; KHG\/KDPG aldolase\tK01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase \/ (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]" }, { "name":"BN406_03885 Formate dehydrogenase\tK00122 FDH; formate dehydrogenase [EC:1.17.1.9]" }, { "name":"BN406_03986 Formate dehydrogenase\tK00122 FDH; formate dehydrogenase [EC:1.17.1.9]" }, { "name":"BN406_02862 fdsD; NAD-dependent formate dehydrogenase delta subunit protein\tK00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]" }, { "name":"BN406_02864 fdsA; NAD-dependent formate dehydrogenase alpha subunit protein\tK00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]" }, { "name":"BN406_05086 fdoG1; Formate dehydrogenase-O major subunit\tK00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]" }, { "name":"BN406_05087 fdoG3; Formate dehydrogenase-O major subunit\tK00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]" }, { "name":"BN406_02866 fdsB; NAD-dependent formate dehydrogenase beta subunit protein\tK00124 fdoH; formate dehydrogenase iron-sulfur subunit" }, { "name":"BN406_05085 fdoH; Formate dehydrogenase-O iron-sulfur subunit\tK00124 fdoH; formate dehydrogenase iron-sulfur subunit" }, { "name":"BN406_02867 fdsG; formate dehydrogenase subunit gamma\tK00127 fdoI; formate dehydrogenase subunit gamma" }, { "name":"BN406_05084 fdoI; formate dehydrogenase subunit gamma\tK00127 fdoI; formate dehydrogenase subunit gamma" }, { "name":"BN406_02793 purU1; Formyltetrahydrofolate deformylase\tK01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]" }, { "name":"BN406_03232 purU3; Formyltetrahydrofolate deformylase\tK01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]" }, { "name":"BN406_05827 N-formylglutamate amidohydrolase\tK01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]" } ] }, { "name":"00640 Propanoate metabolism [PATH:smi00640]", "children":[ { "name":"BN406_02489 acsA3; probabable acetyl-CoA synthetase\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]" }, { "name":"BN406_03122 acsA2; Acetyl-coenzyme A synthetase 2\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]" }, { "name":"BN406_03124 putative protein PA3568\tK01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]" }, { "name":"BN406_03100 acyl-COA transferase\tK01026 pct; propionate CoA-transferase [EC:2.8.3.1]" }, { "name":"BN406_04505 acyl-CoA transferase\tK01026 pct; propionate CoA-transferase [EC:2.8.3.1]" }, { "name":"BN406_04094 ackA; Acetate kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]" }, { "name":"BN406_05808 ackA; Acetate kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]" }, { "name":"BN406_04093 pta1; Phosphate acetyltransferase\tK00625 pta; phosphate acetyltransferase [EC:2.3.1.8]" }, { "name":"BN406_04904 pta3; Phosphate acetyltransferase\tK00625 pta; phosphate acetyltransferase [EC:2.3.1.8]" }, { "name":"BN406_05692 pta; Phosphate acetyltransferase\tK00625 pta; phosphate acetyltransferase [EC:2.3.1.8]" }, { "name":"BN406_06802 malic enzyme\tK00625 pta; phosphate acetyltransferase [EC:2.3.1.8]" }, { "name":"BN406_02789 bkdA1; 2-oxoisovalerate dehydrogenase subunit alpha\tK00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]" }, { "name":"BN406_02790 bkdA2; 2-oxoisovalerate dehydrogenase subunit beta\tK00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]" }, { "name":"BN406_05113 transketolase\tK11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]" }, { "name":"BN406_02791 bkdB; Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex\tK09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]" }, { "name":"BN406_01183 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02792 lpdV; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02904 LPD2; Dihydrolipoyl dehydrogenase 2, mitochondrial\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_06654 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_03498 fadB1; putative enoyl-CoA hydratase\tK01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]" }, { "name":"BN406_00165 fadB; putative fatty oxidation complex alpha subunit\tK01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase \/ enoyl-CoA hydratase \/ 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]" }, { "name":"BN406_02540 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha\tK01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]" }, { "name":"BN406_01053 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit\tK02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein" }, { "name":"BN406_01052 accC; Biotin carboxylase\tK01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]" }, { "name":"BN406_03165 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta\tK01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]" }, { "name":"BN406_06793 bccA; Acetyl-\/propionyl-coenzyme A carboxylase alpha chain\tK11263 bccA; acetyl-CoA\/propionyl-CoA\/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]" }, { "name":"BN406_05000 hypothetical protein\tK01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]" }, { "name":"BN406_05806 puuE; 4-aminobutyrate aminotransferase PuuE\tK00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]" }, { "name":"BN406_02253 Omega-amino acid--pyruvate aminotransferase\tK00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]" }, { "name":"BN406_03089 Omega-amino acid--pyruvate aminotransferase\tK00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]" }, { "name":"BN406_05250 Pcca; Propionyl-CoA carboxylase alpha chain, mitochondrial\tK01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]" }, { "name":"BN406_05251 PCCB; Propionyl-CoA carboxylase beta chain, mitochondrial\tK01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]" }, { "name":"BN406_01017 methylmalonyl-CoA epimerase\tK05606 MCEE; methylmalonyl-CoA\/ethylmalonyl-CoA epimerase [EC:5.1.99.1]" }, { "name":"BN406_05249 bhbA; methylmalonyl-CoA mutase\tK01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]" }, { "name":"BN406_02911 sucC; succinyl-CoA synthetase subunit beta\tK01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]" }, { "name":"BN406_02910 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha\tK01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]" }, { "name":"BN406_00351 mmsA; Methylmalonate-semialdehyde dehydrogenase [acylating]\tK00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) \/ methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]" }, { "name":"BN406_03030 acnA; Aconitate hydratase\tK27802 acnA; aconitate hydratase A \/ 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]" }, { "name":"BN406_00337 aceA; isocitrate lyase\tK01637 ICL; isocitrate\/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]" }, { "name":"BN406_03291 mgsA; methylglyoxal synthase\tK01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]" }, { "name":"BN406_06183 aldoketo reductase\tK18471 ydjG; methylglyoxal reductase [EC:1.1.1.-]" }, { "name":"BN406_02399 gldA; Glycerol dehydrogenase\tK00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]" }, { "name":"BN406_02439 aminotransferase\tK29020 E5.1.1.15; 2-aminohexano-6-lactam racemase [EC:5.1.1.15]" } ] }, { "name":"00650 Butanoate metabolism [PATH:smi00650]", "children":[ { "name":"BN406_00166 fadA; Putative acyltransferase Rv0859\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_00541 vraB; Putative acetyl-CoA C-acetyltransferase vraB\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_01442 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_03063 phbA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_04528 thlA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_02503 hbdA; 3-hydroxybutyryl-CoA dehydrogenase\tK00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]" }, { "name":"BN406_05156 3-hydroxybutyryl-CoA epimerase\tK07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]" }, { "name":"BN406_00165 fadB; putative fatty oxidation complex alpha subunit\tK01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase \/ enoyl-CoA hydratase \/ 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]" }, { "name":"BN406_03498 fadB1; putative enoyl-CoA hydratase\tK01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]" }, { "name":"BN406_02105 enoyl-CoA hydratase\tK01715 crt; short-chain-enoyl-CoA hydratase [EC:4.2.1.150]" }, { "name":"BN406_03099 enoyl-CoA hydratase\tK01715 crt; short-chain-enoyl-CoA hydratase [EC:4.2.1.150]" }, { "name":"BN406_04504 dehydratase\tK01715 crt; short-chain-enoyl-CoA hydratase [EC:4.2.1.150]" }, { "name":"BN406_01467 phbC; POLY3-hydroxybutyrate polymerase\tK03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]" }, { "name":"BN406_03159 hypothetical protein\tK05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]" }, { "name":"BN406_03062 phbB; Acetoacetyl-CoA reductase\tK00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]" }, { "name":"BN406_05207 catI; 3-oxoadipate CoA-transferase subunit A\tK01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]" }, { "name":"BN406_05206 CoA-transferase subunit B protein\tK01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]" }, { "name":"BN406_04758 ycsA; putative tartrate dehydrogenase\/decarboxylase\tK07246 ttuC; tartrate dehydrogenase\/decarboxylase \/ D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]" }, { "name":"BN406_04914 Asp\/Glu\/Hydantoin racemase family protein\tK01799 nicE; maleate isomerase [EC:5.2.1.1]" }, { "name":"BN406_06243 ectoine utilization protein EutA\tK01799 nicE; maleate isomerase [EC:5.2.1.1]" }, { "name":"BN406_02926 sdhA; Succinate dehydrogenase flavoprotein subunit\tK00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]" }, { "name":"BN406_02925 sdhB; Succinate dehydrogenase iron-sulfur subunit\tK00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]" }, { "name":"BN406_02928 sdhC; succinate dehydrogenase cytochrome B-556 subunit transmembrane protein\tK00241 sdhC; succinate dehydrogenase cytochrome b subunit" }, { "name":"BN406_02927 sdhD; succinate dehydrogenase membrane anchor subunit protein\tK00242 sdhD; succinate dehydrogenase membrane anchor subunit" }, { "name":"BN406_05806 puuE; 4-aminobutyrate aminotransferase PuuE\tK00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]" }, { "name":"BN406_04030 GABA-TP3; Gamma aminobutyrate transaminase 3, chloroplastic\tK16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]" }, { "name":"BN406_06293 GABA-TP3; Gamma aminobutyrate transaminase 3, chloroplastic\tK16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]" }, { "name":"BN406_03150 gabD; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_04033 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_04224 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_04759 gabD5; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_04937 gabD7; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_05807 gabD1; putative succinate-semialdehyde dehydrogenase [NADP(+)]\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_06294 aldehyde dehydrogenase\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_06688 gabD; putative succinate-semialdehyde dehydrogenase [NADP(+)]\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_05948 HMGCL; Hydroxymethylglutaryl-CoA lyase, mitochondrial\tK01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]" }, { "name":"BN406_00344 acsA1; Acetoacetyl-coenzyme A synthetase\tK01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]" }, { "name":"BN406_05536 bdhA; D-beta-hydroxybutyrate dehydrogenase\tK00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]" }, { "name":"BN406_00202 ilvB1; hypothetical protein\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_01936 ilvI; Acetolactate synthase large subunit\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_02029 ilvG; thiamine pyrophosphate protein\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_03706 hypothetical protein\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_03874 Thiamine pyrophosphate-requiring protein\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_04001 Acetolactate synthase\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_01935 ilvH; acetolactate synthase 3 regulatory subunit\tK01653 E2.2.1.6S; acetolactate synthase I\/III small subunit [EC:2.2.1.6]" }, { "name":"BN406_03635 L-iditol 2-dehydrogenase\tK00004 BDH; (R,R)-butanediol dehydrogenase \/ meso-butanediol dehydrogenase \/ diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]" }, { "name":"BN406_06668 hypothetical protein\tK03366 butA; meso-butanediol dehydrogenase \/ (S,S)-butanediol dehydrogenase \/ diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]" }, { "name":"BN406_03595 short chain alcohol dehydrogenase\tK18009 budC; meso-butanediol dehydrogenase \/ (S,S)-butanediol dehydrogenase \/ diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]" }, { "name":"BN406_02439 aminotransferase\tK29020 E5.1.1.15; 2-aminohexano-6-lactam racemase [EC:5.1.1.15]" } ] }, { "name":"00660 C5-Branched dibasic acid metabolism [PATH:smi00660]", "children":[ { "name":"BN406_00202 ilvB1; hypothetical protein\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_01936 ilvI; Acetolactate synthase large subunit\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_02029 ilvG; thiamine pyrophosphate protein\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_03706 hypothetical protein\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_03874 Thiamine pyrophosphate-requiring protein\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_04001 Acetolactate synthase\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_01935 ilvH; acetolactate synthase 3 regulatory subunit\tK01653 E2.2.1.6S; acetolactate synthase I\/III small subunit [EC:2.2.1.6]" }, { "name":"BN406_02911 sucC; succinyl-CoA synthetase subunit beta\tK01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]" }, { "name":"BN406_02910 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha\tK01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]" }, { "name":"BN406_03006 leuC; 3-isopropylmalate dehydratase large subunit\tK01703 leuC; 3-isopropylmalate\/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]" }, { "name":"BN406_02977 leuD; 3-isopropylmalate dehydratase small subunit\tK01704 leuD; 3-isopropylmalate\/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]" }, { "name":"BN406_03106 leuB; 3-isopropylmalate dehydrogenase\tK00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]" } ] }, { "name":"00562 Inositol phosphate metabolism [PATH:smi00562]", "children":[ { "name":"BN406_00464 sulfite biosynthesis protein\tK01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]" }, { "name":"BN406_02636 suhB; Inositol-1-monophosphatase\tK01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]" }, { "name":"BN406_06310 inositol monophosphatase\tK01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]" }, { "name":"BN406_06499 inositol monophosphatase\tK01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]" }, { "name":"BN406_06508 inositol monophosphatase\tK01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]" }, { "name":"BN406_06417 myo-inositol-1-phosphate synthase\tK01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]" }, { "name":"BN406_05481 idhA; Inositol 2-dehydrogenase\tK00010 iolG; myo-inositol 2-dehydrogenase \/ D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]" }, { "name":"BN406_06727 idhA; Inositol 2-dehydrogenase\tK00010 iolG; myo-inositol 2-dehydrogenase \/ D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]" }, { "name":"BN406_06786 iolG1; Inositol 2-dehydrogenase 1\tK00010 iolG; myo-inositol 2-dehydrogenase \/ D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]" }, { "name":"BN406_05281 hypothetical protein\tK06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11]" }, { "name":"BN406_03483 mocC; Rhizopine catabolism protein mocC\tK03335 iolE; inosose dehydratase [EC:4.2.1.44]" }, { "name":"BN406_03484 iolD2; 3D-(3,5\/4)-trihydroxycyclohexane-1,2-dione hydrolase 2\tK03336 iolD; 3D-(3,5\/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]" }, { "name":"BN406_03482 iolB; myo-inositol catabolism protein\tK03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]" }, { "name":"BN406_03485 iolC; sugar kinase\tK03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]" }, { "name":"BN406_00351 mmsA; Methylmalonate-semialdehyde dehydrogenase [acylating]\tK00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) \/ methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]" }, { "name":"BN406_01170 tpiA1; Triosephosphate isomerase 1\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]" }, { "name":"BN406_06677 tpiA; Triosephosphate isomerase\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]" } ] }, { "name":"00566 Sulfoquinovose metabolism [PATH:smi00566]", "children":[ { "name":"BN406_02602 SQD1; UDP-sulfoquinovose synthase, chloroplastic\tK06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]" }, { "name":"BN406_02912 mdh; malate dehydrogenase\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]" }, { "name":"BN406_04533 Dehydrogenase, malate\/L-lactate family\tK16844 comC; (2R)-3-sulfolactate dehydrogenase (NADP+) [EC:1.1.1.338]" } ] } ] }, { "name":"09102 Energy metabolism", "children":[ { "name":"00190 Oxidative phosphorylation [PATH:smi00190]", "children":[ { "name":"BN406_00999 nuoA1; NADH-quinone oxidoreductase subunit A 1\tK00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]" }, { "name":"BN406_04571 nuoA2; NADH-quinone oxidoreductase subunit A 2\tK00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]" }, { "name":"BN406_01000 nuoB1; NADH-quinone oxidoreductase subunit B 1\tK00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]" }, { "name":"BN406_04570 nuoB2; NADH-quinone oxidoreductase subunit B 2\tK00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]" }, { "name":"BN406_01001 nuoC1; NADH-quinone oxidoreductase subunit C 1\tK00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]" }, { "name":"BN406_04569 nuoC2; NADH-quinone oxidoreductase subunit C 2\tK00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]" }, { "name":"BN406_01002 nuoD1; NADH-quinone oxidoreductase subunit D 1\tK00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]" }, { "name":"BN406_04568 nuoD2; NADH-quinone oxidoreductase subunit D 2\tK00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]" }, { "name":"BN406_01004 nuoE1; NADH-quinone oxidoreductase subunit E 1\tK00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]" }, { "name":"BN406_01006 hypothetical protein\tK00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]" }, { "name":"BN406_04567 nuoE2; NADH-quinone oxidoreductase subunit E 2\tK00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]" }, { "name":"BN406_01005 nuoF1; NADH-quinone oxidoreductase subunit F 1\tK00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]" }, { "name":"BN406_04566 nuoF2; NADH-quinone oxidoreductase subunit F 2\tK00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]" }, { "name":"BN406_01007 nqo3; NADH-quinone oxidoreductase chain 3\tK00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]" }, { "name":"BN406_04565 nuoG2; NADH-quinone oxidoreductase subunit G 2\tK00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]" }, { "name":"BN406_01008 nuoH1; NADH-quinone oxidoreductase subunit H 1\tK00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]" }, { "name":"BN406_04562 nuoH2; NADH-quinone oxidoreductase subunit H 2\tK00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]" }, { "name":"BN406_01009 nuoI1; NADH-quinone oxidoreductase subunit I 1\tK00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]" }, { "name":"BN406_04563 nuoI2; NADH-quinone oxidoreductase subunit I 2\tK00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]" }, { "name":"BN406_01010 nuoJ; NADH-quinone oxidoreductase subunit J\tK00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]" }, { "name":"BN406_04578 nuoJ2; NuoJ2 NADH:quinone oxidoreductase subunit 6 (chain J)\tK00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]" }, { "name":"BN406_01011 putative membrane protein\tK00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]" }, { "name":"BN406_04577 putative membrane protein\tK00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]" }, { "name":"BN406_01012 nqo12; NADH-quinone oxidoreductase chain 12\tK00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]" }, { "name":"BN406_01013 nuoM; NADH-quinone oxidoreductase subunit M\tK00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]" }, { "name":"BN406_04573 nuoM; NADH-quinone oxidoreductase subunit M\tK00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]" }, { "name":"BN406_01014 nuoN1; NADH-quinone oxidoreductase subunit N 1\tK00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]" }, { "name":"BN406_04572 nuoN2; NADH-quinone oxidoreductase subunit N 2\tK00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]" }, { "name":"BN406_01900 ndh; NADH dehydrogenase transmembrane protein\tK03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]" }, { "name":"BN406_05518 NADH dehydrogenase-like protein Rv1812c\/MT1860\tK03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]" }, { "name":"BN406_02926 sdhA; Succinate dehydrogenase flavoprotein subunit\tK00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]" }, { "name":"BN406_02925 sdhB; Succinate dehydrogenase iron-sulfur subunit\tK00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]" }, { "name":"BN406_02928 sdhC; succinate dehydrogenase cytochrome B-556 subunit transmembrane protein\tK00241 sdhC; succinate dehydrogenase cytochrome b subunit" }, { "name":"BN406_02927 sdhD; succinate dehydrogenase membrane anchor subunit protein\tK00242 sdhD; succinate dehydrogenase membrane anchor subunit" }, { "name":"BN406_01552 petA; Ubiquinol-cytochrome c reductase iron-sulfur subunit\tK00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]" }, { "name":"BN406_01551 fbcB; cytochrome B transmembrane protein\tK00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit" }, { "name":"BN406_01550 fbcC; cytochrome C1 protein\tK00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit" }, { "name":"BN406_00561 ctaB; Protoheme IX farnesyltransferase\tK02257 COX10; heme o synthase [EC:2.5.1.141]" }, { "name":"BN406_05377 cyoD; cytochrome O ubiquinol oxidase CyoD\tK02300 cyoD; cytochrome o ubiquinol oxidase subunit IV" }, { "name":"BN406_02368 hypothetical protein\tK02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]" }, { "name":"BN406_00564 ctaE; Cytochrome c oxidase subunit 3\tK02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]" }, { "name":"BN406_02366 coxO; cytochrome-C oxidase transmembrane protein\tK02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]" }, { "name":"BN406_02367 coxP; cytochrome-c oxidase\tK02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]" }, { "name":"BN406_00560 ctaD; Cytochrome c oxidase subunit 1\tK02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]" }, { "name":"BN406_02365 coxN; Alternative cytochrome c oxidase subunit 1\tK02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]" }, { "name":"BN406_05716 cytochrome c oxidase subunit I\tK15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9]" }, { "name":"BN406_00559 ctaC; Cytochrome c oxidase subunit 2\tK02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]" }, { "name":"BN406_02364 coxM; Alternative cytochrome c oxidase subunit 2\tK02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]" }, { "name":"BN406_05718 cytochrome c oxidase subunit II\tK02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]" }, { "name":"BN406_00563 ctaG; cytochrome C oxidase assembly protein\tK02258 COX11; cytochrome c oxidase assembly protein subunit 11" }, { "name":"BN406_00975 cytochrome C oxidase assembly transmembrane protein\tK02259 COX15; heme a synthase [EC:1.17.99.9]" }, { "name":"BN406_04076 fixN1; Cytochrome c oxidase subunit 1 homolog, bacteroid\tK00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]" }, { "name":"BN406_04204 fixN3; Cytochrome c oxidase subunit 1 homolog, bacteroid\tK00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]" }, { "name":"BN406_04385 fixN5; Cytochrome c oxidase subunit 1 homolog, bacteroid\tK00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]" }, { "name":"BN406_04781 cytochrome-c oxidase\tK00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]" }, { "name":"BN406_04077 cytochrome c oxidase, cbb3-type subunit II\tK00405 ccoO; cytochrome c oxidase cbb3-type subunit II" }, { "name":"BN406_04205 fixO2; cbb3-type cytochrome c oxidase subunit II\tK00405 ccoO; cytochrome c oxidase cbb3-type subunit II" }, { "name":"BN406_04384 fixO1; cbb3-type cytochrome c oxidase subunit II\tK00405 ccoO; cytochrome c oxidase cbb3-type subunit II" }, { "name":"BN406_04780 cytochrome C oxidase mono-heme subunit\/FixO\tK15862 ccoNO; cytochrome c oxidase cbb3-type subunit I\/II [EC:7.1.1.9]" }, { "name":"BN406_04078 fixQ3; FixQ3 nitrogen fixation protein\tK00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV" }, { "name":"BN406_04206 unnamed protein product\tK00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV" }, { "name":"BN406_04383 unnamed protein product\tK00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV" }, { "name":"BN406_04079 fixP1; Cbb3-type cytochrome c oxidase subunit FixP\tK00406 ccoP; cytochrome c oxidase cbb3-type subunit III" }, { "name":"BN406_04207 fixP3; Cbb3-type cytochrome c oxidase subunit FixP\tK00406 ccoP; cytochrome c oxidase cbb3-type subunit III" }, { "name":"BN406_04382 fixP5; Cbb3-type cytochrome c oxidase subunit FixP\tK00406 ccoP; cytochrome c oxidase cbb3-type subunit III" }, { "name":"BN406_05378 cyoC; Cytochrome o ubiquinol oxidase subunit 3\tK02299 cyoC; cytochrome o ubiquinol oxidase subunit III" }, { "name":"BN406_05379 cyoB; Ubiquinol oxidase subunit 1\tK02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]" }, { "name":"BN406_05380 cyoA; cytochrome o ubiquinol oxidase subunit II\tK02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]" }, { "name":"BN406_00194 qxtA; quinol oxidase subunit I transmembrane protein\tK00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]" }, { "name":"BN406_00193 qxtB; quinol oxidase subunit II transmembrane protein\tK00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]" }, { "name":"BN406_02363 cytochrome C transmembrane protein\tK08738 CYC; cytochrome c" }, { "name":"BN406_03353 cycM; Cytochrome c homolog\tK08738 CYC; cytochrome c" }, { "name":"BN406_04546 cytochrome c class I\tK08738 CYC; cytochrome c" }, { "name":"BN406_06485 cytochrome c protein\tK08738 CYC; cytochrome c" }, { "name":"BN406_02892 atpA; ATP synthase subunit alpha\tK02111 ATPF1A; F-type H+\/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]" }, { "name":"BN406_02890 atpD; ATP synthase subunit beta\tK02112 ATPF1B; F-type H+\/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]" }, { "name":"BN406_02891 atpG; F0F1 ATP synthase subunit gamma\tK02115 ATPF1G; F-type H+-transporting ATPase subunit gamma" }, { "name":"BN406_02893 atpH; F0F1 ATP synthase subunit delta\tK02113 ATPF1D; F-type H+-transporting ATPase subunit delta" }, { "name":"BN406_02889 atpC; F0F1 ATP synthase subunit epsilon\tK02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon" }, { "name":"BN406_00489 atpB; F0F1 ATP synthase subunit A\tK02108 ATPF0A; F-type H+-transporting ATPase subunit a" }, { "name":"BN406_00491 atpF2; ATP synthase subunit b 2\tK02109 ATPF0B; F-type H+-transporting ATPase subunit b" }, { "name":"BN406_00492 atpF1; ATP synthase subunit b 1\tK02109 ATPF0B; F-type H+-transporting ATPase subunit b" }, { "name":"BN406_00490 atpE; F0F1 ATP synthase subunit C\tK02110 ATPF0C; F-type H+-transporting ATPase subunit c" }, { "name":"BN406_02943 ppa; inorganic pyrophosphatase\tK01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]" }, { "name":"BN406_00921 ppk; polyphosphate kinase\tK00937 ppk1; polyphosphate kinase [EC:2.7.4.1]" }, { "name":"BN406_00141 hypothetical protein\tK22468 ppk2; polyphosphate kinase [EC:2.7.4.34]" }, { "name":"BN406_04148 polyphosphate kinase 2\tK22468 ppk2; polyphosphate kinase [EC:2.7.4.34]" }, { "name":"BN406_04989 hypothetical protein\tK22468 ppk2; polyphosphate kinase [EC:2.7.4.34]" } ] }, { "name":"00195 Photosynthesis" }, { "name":"00196 Photosynthesis - antenna proteins" }, { "name":"00710 Carbon fixation by Calvin cycle [PATH:smi00710]", "children":[ { "name":"BN406_06465 cbbL; Ribulose bisphosphate carboxylase large chain\tK01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]" }, { "name":"BN406_06466 cbbS; ribulose-1,5-bisphosphate carboxylase small subunit protein\tK01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]" }, { "name":"BN406_02623 pgk; phosphoglycerate kinase\tK00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]" }, { "name":"BN406_02621 gap; glyceraldehyde-3-phosphate dehydrogenase\tK00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]" }, { "name":"BN406_02625 fbaB; fructose-bisphosphate aldolase class I protein\tK01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]" }, { "name":"BN406_06665 fda; Fructose-bisphosphate aldolase class 1\tK01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]" }, { "name":"BN406_05800 fba; Fructose-bisphosphate aldolase\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"BN406_06464 cbbA; Fructose-bisphosphate aldolase\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"BN406_06461 cbbF; fructose-1,6-bisphosphatase\tK03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]" }, { "name":"BN406_02419 tkt2; Transketolase 2\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_02620 cbbT; Transketolase\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_04021 transketolase\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_04022 transketolase\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_06463 cbbT; Transketolase\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_06671 hypothetical protein\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_06672 Putative transketolase N-terminal section\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_06679 cbbT; Transketolase\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_01590 rpiA; ribose-5-phosphate isomerase A\tK01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]" }, { "name":"BN406_06301 ribose-5-phosphate isomerase B\tK01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]" }, { "name":"BN406_06462 cbbP; phosphoribulokinase\tK28462 prkA_B; phosphoribulokinase [EC:2.7.1.19]" }, { "name":"BN406_01170 tpiA1; Triosephosphate isomerase 1\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]" }, { "name":"BN406_06677 tpiA; Triosephosphate isomerase\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]" }, { "name":"BN406_01497 cbbE; Ribulose-phosphate 3-epimerase\tK01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]" }, { "name":"BN406_06468 cbbE; Ribulose-phosphate 3-epimerase\tK01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]" }, { "name":"BN406_02896 tal; putative transaldolase\tK00616 TALDO1; transaldolase [EC:2.2.1.2]" }, { "name":"BN406_06680 tal; putative transaldolase\tK00616 TALDO1; transaldolase [EC:2.2.1.2]" }, { "name":"BN406_03179 pckA; phosphoenolpyruvate carboxykinase\tK01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]" }, { "name":"BN406_00588 ppdK; Pyruvate, phosphate dikinase\tK01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]" }, { "name":"BN406_00027 tme; NADP-dependent malic enzyme\tK00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]" }, { "name":"BN406_01570 dme; NAD-dependent malic enzyme\tK00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]" }, { "name":"BN406_02912 mdh; malate dehydrogenase\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]" } ] }, { "name":"00720 Other carbon fixation pathways [PATH:smi00720]", "children":[ { "name":"BN406_00588 ppdK; Pyruvate, phosphate dikinase\tK01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]" }, { "name":"BN406_03077 pyc; Pyruvate carboxylase\tK01958 PC; pyruvate carboxylase [EC:6.4.1.1]" }, { "name":"BN406_02912 mdh; malate dehydrogenase\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]" }, { "name":"BN406_01593 fumC; Fumarate hydratase class II\tK01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]" }, { "name":"BN406_02926 sdhA; Succinate dehydrogenase flavoprotein subunit\tK00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]" }, { "name":"BN406_02925 sdhB; Succinate dehydrogenase iron-sulfur subunit\tK00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]" }, { "name":"BN406_02928 sdhC; succinate dehydrogenase cytochrome B-556 subunit transmembrane protein\tK00241 sdhC; succinate dehydrogenase cytochrome b subunit" }, { "name":"BN406_02927 sdhD; succinate dehydrogenase membrane anchor subunit protein\tK00242 sdhD; succinate dehydrogenase membrane anchor subunit" }, { "name":"BN406_02910 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha\tK01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]" }, { "name":"BN406_02911 sucC; succinyl-CoA synthetase subunit beta\tK01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]" }, { "name":"BN406_00166 fadA; Putative acyltransferase Rv0859\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_00541 vraB; Putative acetyl-CoA C-acetyltransferase vraB\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_01442 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_03063 phbA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_04528 thlA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_01525 icd; Isocitrate dehydrogenase [NADP]\tK00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]" }, { "name":"BN406_03030 acnA; Aconitate hydratase\tK27802 acnA; aconitate hydratase A \/ 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]" }, { "name":"BN406_02540 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha\tK01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]" }, { "name":"BN406_01053 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit\tK02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein" }, { "name":"BN406_01052 accC; Biotin carboxylase\tK01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]" }, { "name":"BN406_03165 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta\tK01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]" }, { "name":"BN406_01017 methylmalonyl-CoA epimerase\tK05606 MCEE; methylmalonyl-CoA\/ethylmalonyl-CoA epimerase [EC:5.1.99.1]" }, { "name":"BN406_05249 bhbA; methylmalonyl-CoA mutase\tK01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]" }, { "name":"BN406_02238 fhs; formate--tetrahydrofolate ligase\tK01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]" }, { "name":"BN406_00309 folD2; Bifunctional protein FolD 2\tK01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) \/ methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]" }, { "name":"BN406_03215 folD1; Bifunctional protein FolD 1\tK01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) \/ methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]" }, { "name":"BN406_01715 oxidoreductase\tK00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]" }, { "name":"BN406_02023 metF; 5,10-methylenetetrahydrofolate reductase\tK00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]" }, { "name":"BN406_04093 pta1; Phosphate acetyltransferase\tK00625 pta; phosphate acetyltransferase [EC:2.3.1.8]" }, { "name":"BN406_04904 pta3; Phosphate acetyltransferase\tK00625 pta; phosphate acetyltransferase [EC:2.3.1.8]" }, { "name":"BN406_05692 pta; Phosphate acetyltransferase\tK00625 pta; phosphate acetyltransferase [EC:2.3.1.8]" }, { "name":"BN406_06802 malic enzyme\tK00625 pta; phosphate acetyltransferase [EC:2.3.1.8]" }, { "name":"BN406_04094 ackA; Acetate kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]" }, { "name":"BN406_05808 ackA; Acetate kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]" }, { "name":"BN406_02489 acsA3; probabable acetyl-CoA synthetase\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]" }, { "name":"BN406_03122 acsA2; Acetyl-coenzyme A synthetase 2\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]" } ] }, { "name":"00680 Methane metabolism [PATH:smi00680]", "children":[ { "name":"BN406_06484 xoxF; Putative dehydrogenase xoxF\tK23995 xoxF; lanthanide-dependent methanol dehydrogenase [EC:1.1.2.10]" }, { "name":"BN406_06470 gfa; Glutathione-dependent formaldehyde-activating enzyme\tK03396 gfa; S-(hydroxymethyl)glutathione synthase [EC:4.4.1.22]" }, { "name":"BN406_01125 adhI; Alcohol dehydrogenase class-3\tK00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase \/ alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]" }, { "name":"BN406_06487 adhI; Alcohol dehydrogenase class-3\tK00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase \/ alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]" }, { "name":"BN406_01122 Esd; S-formylglutathione hydrolase\tK01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]" }, { "name":"BN406_06486 fghA; S-formylglutathione hydrolase\tK01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]" }, { "name":"BN406_03885 Formate dehydrogenase\tK00122 FDH; formate dehydrogenase [EC:1.17.1.9]" }, { "name":"BN406_03986 Formate dehydrogenase\tK00122 FDH; formate dehydrogenase [EC:1.17.1.9]" }, { "name":"BN406_02864 fdsA; NAD-dependent formate dehydrogenase alpha subunit protein\tK00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]" }, { "name":"BN406_05086 fdoG1; Formate dehydrogenase-O major subunit\tK00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]" }, { "name":"BN406_05087 fdoG3; Formate dehydrogenase-O major subunit\tK00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]" }, { "name":"BN406_02866 fdsB; NAD-dependent formate dehydrogenase beta subunit protein\tK00124 fdoH; formate dehydrogenase iron-sulfur subunit" }, { "name":"BN406_05085 fdoH; Formate dehydrogenase-O iron-sulfur subunit\tK00124 fdoH; formate dehydrogenase iron-sulfur subunit" }, { "name":"BN406_02867 fdsG; formate dehydrogenase subunit gamma\tK00127 fdoI; formate dehydrogenase subunit gamma" }, { "name":"BN406_05084 fdoI; formate dehydrogenase subunit gamma\tK00127 fdoI; formate dehydrogenase subunit gamma" }, { "name":"BN406_02862 fdsD; NAD-dependent formate dehydrogenase delta subunit protein\tK00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]" }, { "name":"BN406_00943 glyA1; Serine hydroxymethyltransferase 1\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" }, { "name":"BN406_03708 aminotransferase, class V superfamily\tK00830 AGXT; alanine-glyoxylate transaminase \/ serine-glyoxylate transaminase \/ serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]" }, { "name":"BN406_04551 Agxt; Serine--pyruvate aminotransferase, mitochondrial\tK00830 AGXT; alanine-glyoxylate transaminase \/ serine-glyoxylate transaminase \/ serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]" }, { "name":"BN406_03090 ttuD; Putative hydroxypyruvate reductase\tK11529 gck; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"BN406_04503 ttuD; Putative hydroxypyruvate reductase\tK11529 gck; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"BN406_05314 ttuD; Putative hydroxypyruvate reductase\tK11529 gck; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"BN406_01175 eno; phosphopyruvate hydratase\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]" }, { "name":"BN406_02912 mdh; malate dehydrogenase\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]" }, { "name":"BN406_02625 fbaB; fructose-bisphosphate aldolase class I protein\tK01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]" }, { "name":"BN406_06665 fda; Fructose-bisphosphate aldolase class 1\tK01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]" }, { "name":"BN406_05800 fba; Fructose-bisphosphate aldolase\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"BN406_06464 cbbA; Fructose-bisphosphate aldolase\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"BN406_06461 cbbF; fructose-1,6-bisphosphatase\tK03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]" }, { "name":"BN406_04939 tmd; Trimethylamine dehydrogenase\tK00317 dmd-tmd; dimethylamine\/trimethylamine dehydrogenase [EC:1.5.8.1 1.5.8.2]" }, { "name":"BN406_03237 oxidoreductase\tK18277 tmm; trimethylamine monooxygenase [EC:1.14.13.148]" }, { "name":"BN406_03238 aminomethyltransferase\tK28979 tdm; trimethylamine-oxide aldolase [EC:4.1.2.32]" }, { "name":"BN406_03221 glxB; Glutamine amidotransferase-like protein glxB\tK22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21]" }, { "name":"BN406_03222 glxC; oxidoreductase\tK22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21]" }, { "name":"BN406_03223 glxD; Glutamate synthase large subunit-like protein\tK22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21]" }, { "name":"BN406_03219 soxB3; Sarcosine oxidase subunit beta\tK22084 mgdA; methylglutamate dehydrogenase subunit A [EC:1.5.99.5]" }, { "name":"BN406_03218 hypothetical protein\tK22085 mgdB; methylglutamate dehydrogenase subunit B [EC:1.5.99.5]" }, { "name":"BN406_03217 soxA3; Sarcosine oxidase subunit alpha\tK22086 mgdC; methylglutamate dehydrogenase subunit C [EC:1.5.99.5]" }, { "name":"BN406_03216 soxG; sarcosine oxidase subunit gamma\tK22087 mgdD; methylglutamate dehydrogenase subunit D [EC:1.5.99.5]" }, { "name":"BN406_04094 ackA; Acetate kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]" }, { "name":"BN406_05808 ackA; Acetate kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]" }, { "name":"BN406_04093 pta1; Phosphate acetyltransferase\tK00625 pta; phosphate acetyltransferase [EC:2.3.1.8]" }, { "name":"BN406_04904 pta3; Phosphate acetyltransferase\tK00625 pta; phosphate acetyltransferase [EC:2.3.1.8]" }, { "name":"BN406_05692 pta; Phosphate acetyltransferase\tK00625 pta; phosphate acetyltransferase [EC:2.3.1.8]" }, { "name":"BN406_06802 malic enzyme\tK00625 pta; phosphate acetyltransferase [EC:2.3.1.8]" }, { "name":"BN406_02489 acsA3; probabable acetyl-CoA synthetase\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]" }, { "name":"BN406_03122 acsA2; Acetyl-coenzyme A synthetase 2\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]" }, { "name":"BN406_03295 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase\tK01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]" }, { "name":"BN406_02058 oxidoreductase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"BN406_02405 oxidoreductase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"BN406_02587 serA; D-3-phosphoglycerate dehydrogenase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"BN406_04465 glyoxylate reductase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"BN406_06742 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"BN406_02588 serC; phosphoserine aminotransferase\tK00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]" }, { "name":"BN406_01941 serB; phosphoserine phosphatase\tK01079 serB; phosphoserine phosphatase [EC:3.1.3.3]" }, { "name":"BN406_00474 hypothetical protein\tK14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]" }, { "name":"BN406_01707 mttB; trimethylamine methyltransferase\tK14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]" }, { "name":"BN406_02097 methyltransferase\tK14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]" }, { "name":"BN406_04542 trimethylamine methyltransferase\tK14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]" }, { "name":"BN406_05814 membrane protein, methyltransferase\tK14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]" }, { "name":"BN406_04935 dehydrogenase\tK05884 comC; L-2-hydroxycarboxylate dehydrogenase (NAD+) [EC:1.1.1.337]" } ] }, { "name":"00910 Nitrogen metabolism [PATH:smi00910]", "children":[ { "name":"BN406_06238 nitrate transporter protein\tK02575 NRT2; MFS transporter, NNP family, nitrate\/nitrite transporter" }, { "name":"BN406_04055 nrtA; Nitrate transport protein NrtA\tK15576 nrtA; nitrate\/nitrite transport system substrate-binding protein" }, { "name":"BN406_04054 nrtB; Nitrate transport permease protein nrtB\tK15577 nrtB; nitrate\/nitrite transport system permease protein" }, { "name":"BN406_04053 nasD; Nitrate transport protein NasD\tK15578 nrtC; nitrate\/nitrite transport system ATP-binding protein [EC:7.3.2.4]" }, { "name":"BN406_04393 napA; Periplasmic nitrate reductase\tK02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]" }, { "name":"BN406_04139 nitrate reductase cytochrome c-type subunit (NapB)\tK02568 napB; nitrate reductase (cytochrome), electron transfer subunit" }, { "name":"BN406_04392 napB; Periplasmic nitrate reductase, electron transfer subunit\tK02568 napB; nitrate reductase (cytochrome), electron transfer subunit" }, { "name":"BN406_05561 nasA; Nitrate reductase\tK00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]" }, { "name":"BN406_05563 nasD; Nitrite reductase [NAD(P)H]\tK26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]" }, { "name":"BN406_05562 nitrite reductase (NAD(P)H) small subunit\tK26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]" }, { "name":"BN406_04400 nirK; Copper-containing nitrite reductase\tK00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]" }, { "name":"BN406_04415 norB; Nitric oxide reductase subunit B\tK04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]" }, { "name":"BN406_04416 norC; NorC nitric oxide reductase, small subunit\tK02305 norC; nitric oxide reductase subunit C" }, { "name":"BN406_04364 nosZ; Nitrous-oxide reductase\tK00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]" }, { "name":"BN406_04238 nifD1; Nitrogenase molybdenum-iron protein alpha chain\tK02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]" }, { "name":"BN406_04239 nifK1; Nitrogenase molybdenum-iron protein beta chain\tK02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]" }, { "name":"BN406_04237 nifH; Nitrogenase iron protein\tK02588 nifH; nitrogenase iron protein NifH" }, { "name":"BN406_00139 2-nitropropane dioxygenase\tK00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]" }, { "name":"BN406_03115 hypothetical protein\tK15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]" }, { "name":"BN406_04955 gdhA; glutamate dehydrogenase\tK00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]" }, { "name":"BN406_00321 glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_01379 glnA; Glutamine synthetase 1\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_02037 hypothetical protein\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_02355 glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_02429 glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_03224 glnT; Glutamine synthetase 3\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_05261 glnII; Glutamine synthetase 2\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_02669 gltB; Ferredoxin-dependent glutamate synthase 1\tK00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]" }, { "name":"BN406_02668 Putative glutamate synthase [NADPH]\tK00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]" }, { "name":"BN406_04165 arcC; carbamate kinase\tK00926 arcC; carbamate kinase [EC:2.7.2.2]" }, { "name":"BN406_03113 cynT; carbonic anhydrase\tK01673 cynT; carbonic anhydrase [EC:4.2.1.1]" }, { "name":"BN406_05061 cah; carbonic anhydrase\tK01674 cah; carbonic anhydrase [EC:4.2.1.1]" }, { "name":"BN406_01640 acetyltransferase\tK28956 E4.2.1.1; carbonic anhydrase [EC:4.2.1.1]" } ] }, { "name":"00920 Sulfur metabolism [PATH:smi00920]", "children":[ { "name":"BN406_03806 sbp; Sulfate-binding protein\tK02048 cysP; sulfate\/thiosulfate transport system substrate-binding protein" }, { "name":"BN406_05940 sbp; Sulfate-binding protein\tK23163 sbp; sulfate\/thiosulfate transport system substrate-binding protein" }, { "name":"BN406_05941 cysT; putative sulfate transport system permease protein cysT\tK02046 cysU; sulfate\/thiosulfate transport system permease protein" }, { "name":"BN406_05942 cysW; Sulfate transport system permease protein CysW\tK02047 cysW; sulfate\/thiosulfate transport system permease protein" }, { "name":"BN406_03807 cysA1; Sulfate\/thiosulfate import ATP-binding protein CysA 1\tK02045 cysA; sulfate\/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]" }, { "name":"BN406_05943 cysA2; Sulfate\/thiosulfate import ATP-binding protein CysA 2\tK02045 cysA; sulfate\/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]" }, { "name":"BN406_05699 taurine ABC transporter periplasmic binding protein\tK15551 tauA; taurine transport system substrate-binding protein" }, { "name":"BN406_05697 tauC; Taurine transport system permease protein tauC\tK15552 tauC; taurine transport system permease protein" }, { "name":"BN406_05698 tauB; Taurine import ATP-binding protein TauB\tK10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]" }, { "name":"BN406_05221 NADH-dependent FMN reductase\tK00299 ssuE; FMN reductase [EC:1.5.1.38]" }, { "name":"BN406_04266 nodQ; Bifunctional enzyme NodQ\tK00955 cysNC; bifunctional enzyme CysN\/CysC [EC:2.7.7.4 2.7.1.25]" }, { "name":"BN406_05924 nodQ; Bifunctional enzyme NodQ\tK00955 cysNC; bifunctional enzyme CysN\/CysC [EC:2.7.7.4 2.7.1.25]" }, { "name":"BN406_00598 cysN; Sulfate adenylyltransferase subunit 1\tK00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]" }, { "name":"BN406_00599 cysD; Sulfate adenylyltransferase subunit 2\tK00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]" }, { "name":"BN406_04265 nodP; Sulfate adenylyltransferase subunit 2\tK00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]" }, { "name":"BN406_05925 nodP; Sulfate adenylyltransferase subunit 2\tK00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]" }, { "name":"BN406_02335 cysQ; transmembrane protein\tK01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]" }, { "name":"BN406_05923 3'(2'),5'-bisphosphate nucleotidase\tK01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]" }, { "name":"BN406_00600 cysH; phosphoadenosine phosphosulfate reductase\tK00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]" }, { "name":"BN406_02688 sulfite oxidase\tK00387 SUOX; sulfite oxidase [EC:1.8.3.1]" }, { "name":"BN406_04793 sulfur oxidation protein SoxY\tK17226 soxY; sulfur-oxidizing protein SoxY" }, { "name":"BN406_06490 hypothetical protein\tK17226 soxY; sulfur-oxidizing protein SoxY" }, { "name":"BN406_04792 sulfur oxidation protein SoxZ\tK17227 soxZ; sulfur-oxidizing protein SoxZ" }, { "name":"BN406_01202 ferredoxin--nitrite reductase\tK00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]" }, { "name":"BN406_04790 soxF; sulfur oxidation F protein\tK17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]" }, { "name":"BN406_01359 STR1; Thiosulfate\/3-mercaptopyruvate sulfurtransferase 1, mitochondrial\tK01011 TST; thiosulfate\/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]" }, { "name":"BN406_05676 thtR; sulfurtransferase\tK01011 TST; thiosulfate\/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]" }, { "name":"BN406_01215 cysE; Serine acetyltransferase\tK00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]" }, { "name":"BN406_01356 cysB; Cysteine synthase\tK01738 cysK; cysteine synthase [EC:2.5.1.47]" }, { "name":"BN406_03471 cysK1; O-acetylserine sulfhydrylase\tK01738 cysK; cysteine synthase [EC:2.5.1.47]" }, { "name":"BN406_02980 metA; homoserine O-succinyltransferase\tK00651 metA; homoserine O-succinyltransferase\/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]" }, { "name":"BN406_03211 metB; Cystathionine gamma-synthase\tK01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]" }, { "name":"BN406_00155 metZ; O-succinylhomoserine sulfhydrylase\tK10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]" }, { "name":"BN406_00167 butyryl-CoA dehydrogenase\tK20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]" }, { "name":"BN406_00529 acyl-CoA dehydrogenase\tK20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]" } ] } ] }, { "name":"09103 Lipid metabolism", "children":[ { "name":"00061 Fatty acid biosynthesis [PATH:smi00061]", "children":[ { "name":"BN406_02540 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha\tK01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]" }, { "name":"BN406_01053 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit\tK02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein" }, { "name":"BN406_01052 accC; Biotin carboxylase\tK01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]" }, { "name":"BN406_03165 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta\tK01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]" }, { "name":"BN406_06793 bccA; Acetyl-\/propionyl-coenzyme A carboxylase alpha chain\tK11263 bccA; acetyl-CoA\/propionyl-CoA\/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]" }, { "name":"BN406_00879 unnamed protein product\tK02078 acpP; acyl carrier protein" }, { "name":"BN406_02135 unnamed protein product\tK02078 acpP; acyl carrier protein" }, { "name":"BN406_05985 hypothetical protein\tK02078 acpP; acyl carrier protein" }, { "name":"BN406_06019 unnamed protein product\tK02078 acpP; acyl carrier protein" }, { "name":"BN406_06109 hypothetical protein\tK02078 acpP; acyl carrier protein" }, { "name":"BN406_00877 fabD; Malonyl CoA-acyl carrier protein transacylase\tK00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]" }, { "name":"BN406_00958 fabH; 3-oxoacyl-ACP synthase\tK00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]" }, { "name":"BN406_03378 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase 1\tK00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]" }, { "name":"BN406_00880 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"BN406_01668 3-oxoacyl-ACP synthase\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"BN406_01669 3-oxoacyl-ACP synthase\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"BN406_00878 nodG; Nodulation protein G\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_01391 putative short-chain dehydrogenase\/reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_02869 oxidoreductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03494 3-oxoacyl-ACP reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03670 Short-chain type dehydrogenase\/reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03731 short chain dehydrogenase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03760 short-chain dehydrogenase\/reductase SDR\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03856 short-chain dehydrogenase\/reductase SDR\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03879 3-ketoacyl-ACP reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_04264 nodG; Nodulation protein G\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_04355 Short-chain type dehydrogenase\/reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_06191 Short-chain type dehydrogenase\/reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_06222 3-oxoacyl-(acyl-carrier-protein) reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_06762 hypothetical protein\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03379 fabA; 3-hydroxydecanoyl-ACP dehydratase\tK01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase \/ trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]" }, { "name":"BN406_01236 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein]dehydratase\tK02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]" }, { "name":"BN406_01670 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA\/FabZ\tK02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]" }, { "name":"BN406_00553 fabI1; Enoyl-[acyl-carrier-protein] reductase [NADH] 1\tK00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]" }, { "name":"BN406_03377 fabI2; Enoyl-[acyl-carrier-protein] reductase [NADH] 2\tK00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]" }, { "name":"BN406_04095 fabI1; Enoyl-[acyl-carrier-protein] reductase [NADH] 1\tK00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]" }, { "name":"BN406_00132 fadD; Long-chain-fatty-acid--CoA ligase\tK01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]" } ] }, { "name":"00062 Fatty acid elongation" }, { "name":"00071 Fatty acid degradation [PATH:smi00071]", "children":[ { "name":"BN406_00166 fadA; Putative acyltransferase Rv0859\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_00541 vraB; Putative acetyl-CoA C-acetyltransferase vraB\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_01442 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_03063 phbA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_04528 thlA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_00165 fadB; putative fatty oxidation complex alpha subunit\tK01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase \/ enoyl-CoA hydratase \/ 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]" }, { "name":"BN406_03498 fadB1; putative enoyl-CoA hydratase\tK01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]" }, { "name":"BN406_05156 3-hydroxybutyryl-CoA epimerase\tK07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]" }, { "name":"BN406_02075 yngJ; putative acyl-CoA dehydrogenase YngJ\tK00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]" }, { "name":"BN406_05811 putative glutaryl-CoA dehydrogenase, mitochondrial\tK00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]" }, { "name":"BN406_00132 fadD; Long-chain-fatty-acid--CoA ligase\tK01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]" }, { "name":"BN406_00447 oxidoreductase\tK00529 hcaD; 3-phenylpropionate\/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]" }, { "name":"BN406_02372 ferredoxin reductase\tK00529 hcaD; 3-phenylpropionate\/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]" }, { "name":"BN406_02376 ferredoxin--NAD(+) reductase\tK00529 hcaD; 3-phenylpropionate\/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]" }, { "name":"BN406_06058 andAa; Anthranilate 1,2-dioxygenase system ferredoxin--NAD(+) reductase component\tK00529 hcaD; 3-phenylpropionate\/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]" }, { "name":"BN406_01125 adhI; Alcohol dehydrogenase class-3\tK00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase \/ alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]" }, { "name":"BN406_06487 adhI; Alcohol dehydrogenase class-3\tK00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase \/ alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]" }, { "name":"BN406_00627 probabable alcohol dehydrogenase\tK13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]" }, { "name":"BN406_04098 adhA1; Alcohol dehydrogenase\tK13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]" }, { "name":"BN406_04429 adhA3; Alcohol dehydrogenase\tK13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]" }, { "name":"BN406_02352 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03510 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03712 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_04757 aldA; Aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_05853 aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" } ] }, { "name":"00073 Cutin, suberine and wax biosynthesis" }, { "name":"00074 Mycolic acid biosynthesis [PATH:smi00074]", "children":[ { "name":"BN406_06793 bccA; Acetyl-\/propionyl-coenzyme A carboxylase alpha chain\tK11263 bccA; acetyl-CoA\/propionyl-CoA\/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]" }, { "name":"BN406_00805 acpS; 4'-phosphopantetheinyl transferase\tK00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]" }, { "name":"BN406_00879 unnamed protein product\tK02078 acpP; acyl carrier protein" }, { "name":"BN406_02135 unnamed protein product\tK02078 acpP; acyl carrier protein" }, { "name":"BN406_05985 hypothetical protein\tK02078 acpP; acyl carrier protein" }, { "name":"BN406_06019 unnamed protein product\tK02078 acpP; acyl carrier protein" }, { "name":"BN406_06109 hypothetical protein\tK02078 acpP; acyl carrier protein" }, { "name":"BN406_00877 fabD; Malonyl CoA-acyl carrier protein transacylase\tK00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]" } ] }, { "name":"00100 Steroid biosynthesis" }, { "name":"00120 Primary bile acid biosynthesis" }, { "name":"00121 Secondary bile acid biosynthesis [PATH:smi00121]", "children":[ { "name":"BN406_04893 short-chain dehydrogenase\/reductase SDR\tK00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]" } ] }, { "name":"00140 Steroid hormone biosynthesis" }, { "name":"00561 Glycerolipid metabolism [PATH:smi00561]", "children":[ { "name":"BN406_03090 ttuD; Putative hydroxypyruvate reductase\tK11529 gck; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"BN406_04503 ttuD; Putative hydroxypyruvate reductase\tK11529 gck; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"BN406_05314 ttuD; Putative hydroxypyruvate reductase\tK11529 gck; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"BN406_02352 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03510 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03712 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_04757 aldA; Aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_05853 aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_02549 adhC2; NADP-dependent alcohol dehydrogenase C 2\tK13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]" }, { "name":"BN406_06358 glycerone kinase\tK05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]" }, { "name":"BN406_06360 glycerone kinase\tK05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]" }, { "name":"BN406_06359 glycerone kinase\tK05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]" }, { "name":"BN406_06361 dihydroxyacetone kinase\tK05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]" }, { "name":"BN406_02399 gldA; Glycerol dehydrogenase\tK00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]" }, { "name":"BN406_05537 glpK; Glycerol kinase\tK00864 glpK; glycerol kinase [EC:2.7.1.30]" }, { "name":"BN406_06670 glpK2; Glycerol kinase 2\tK00864 glpK; glycerol kinase [EC:2.7.1.30]" }, { "name":"BN406_00957 plsX; glycerol-3-phosphate acyltransferase PlsX\tK03621 plsX; phosphate acyltransferase [EC:2.3.1.274]" }, { "name":"BN406_01036 glycerol-3-phosphate acyltransferase PlsY\tK08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]" }, { "name":"BN406_02516 1-acyl-SN-glycerol-3-phosphate acyltransferase (PLSC) protein\tK00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]" }, { "name":"BN406_01616 dgkA; diacylglycerol kinase\tK00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]" }, { "name":"BN406_02602 SQD1; UDP-sulfoquinovose synthase, chloroplastic\tK06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]" }, { "name":"BN406_05140 melA1; Alpha-galactosidase\tK07406 melA; alpha-galactosidase [EC:3.2.1.22]" }, { "name":"BN406_05145 melA3; Alpha-galactosidase\tK07406 melA; alpha-galactosidase [EC:3.2.1.22]" } ] }, { "name":"00564 Glycerophospholipid metabolism [PATH:smi00564]", "children":[ { "name":"BN406_02933 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase\tK00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]" }, { "name":"BN406_02871 glpD3; Glycerol-3-phosphate dehydrogenase\tK00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]" }, { "name":"BN406_03680 FAD dependent oxidoreductase\tK00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]" }, { "name":"BN406_06184 glycerol-3-phosphate dehydrogenase\tK00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]" }, { "name":"BN406_06658 hypothetical protein\tK00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]" }, { "name":"BN406_01036 glycerol-3-phosphate acyltransferase PlsY\tK08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]" }, { "name":"BN406_02516 1-acyl-SN-glycerol-3-phosphate acyltransferase (PLSC) protein\tK00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]" }, { "name":"BN406_01616 dgkA; diacylglycerol kinase\tK00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]" }, { "name":"BN406_02680 pldB; lysophospholipase L2 protein\tK01048 pldB; lysophospholipase [EC:3.1.1.5]" }, { "name":"BN406_00813 hypothetical protein\tK01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]" }, { "name":"BN406_02820 hypothetical protein\tK01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]" }, { "name":"BN406_03465 hypothetical protein\tK00570 pmtA; phosphatidylethanolamine\/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]" }, { "name":"BN406_00137 hypothetical protein\tK00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]" }, { "name":"BN406_01232 phosphatidate cytidylyltransferase\tK00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]" }, { "name":"BN406_01424 pcs; phosphatidylcholine synthase\tK01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]" }, { "name":"BN406_00858 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase transmembrane protein\tK17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]" }, { "name":"BN406_00857 phosphatidylserine decarboxylase\tK01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]" }, { "name":"BN406_00905 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase\tK00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]" }, { "name":"BN406_01251 phospholipase D\tK06131 clsA_B; cardiolipin synthase A\/B [EC:2.7.8.-]" }, { "name":"BN406_00989 phospholipase D\tK06132 clsC; cardiolipin synthase C [EC:2.7.8.-]" }, { "name":"BN406_02018 hypothetical protein\tK13622 btaA; S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase" }, { "name":"BN406_02019 methyltransferase\tK13623 btaB; S-adenosylmethionine-diacylgycerolhomoserine-N-methlytransferase" } ] }, { "name":"00565 Ether lipid metabolism" }, { "name":"00600 Sphingolipid metabolism [PATH:smi00600]", "children":[ { "name":"BN406_05132 lacZ; Beta-galactosidase\tK01190 lacZ; beta-galactosidase [EC:3.2.1.23]" }, { "name":"BN406_04320 arylsulfatase\tK01130 atsA; arylsulfatase [EC:3.1.6.1]" }, { "name":"BN406_04653 arylsulfatase\tK01130 atsA; arylsulfatase [EC:3.1.6.1]" }, { "name":"BN406_05140 melA1; Alpha-galactosidase\tK07406 melA; alpha-galactosidase [EC:3.2.1.22]" }, { "name":"BN406_05145 melA3; Alpha-galactosidase\tK07406 melA; alpha-galactosidase [EC:3.2.1.22]" }, { "name":"BN406_05831 hexA; beta-N-acetylhexosaminidase\tK12373 HEXA_B; hexosaminidase [EC:3.2.1.52]" } ] }, { "name":"00590 Arachidonic acid metabolism" }, { "name":"00591 Linoleic acid metabolism" }, { "name":"00592 alpha-Linolenic acid metabolism" }, { "name":"01040 Biosynthesis of unsaturated fatty acids [PATH:smi01040]", "children":[ { "name":"BN406_03020 tesA; acyl-CoA thioesterase i protein\tK10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]" }, { "name":"BN406_02988 tesB; acyl-CoA thioesterase II\tK10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.20]" }, { "name":"BN406_01627 hypothetical protein\tK10806 yciA; acyl-CoA thioesterase [EC:3.1.2.-]" } ] } ] }, { "name":"09104 Nucleotide metabolism", "children":[ { "name":"00230 Purine metabolism [PATH:smi00230]", "children":[ { "name":"BN406_03267 deoB; phosphopentomutase\tK01839 deoB; phosphopentomutase [EC:5.4.2.7]" }, { "name":"BN406_02703 pgm; Phosphoglucomutase\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"BN406_02198 prs; Ribose-phosphate pyrophosphokinase\tK00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]" }, { "name":"BN406_00860 purF; Amidophosphoribosyltransferase\tK00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]" }, { "name":"BN406_00512 purD; Phosphoribosylamine--glycine ligase\tK01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]" }, { "name":"BN406_00917 purN; phosphoribosylglycinamide formyltransferase\tK11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]" }, { "name":"BN406_01511 purL; phosphoribosylformylglycinamidine synthase II\tK23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]" }, { "name":"BN406_01506 phosphoribosylformylglycinamidine synthase subunit PurS\tK23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]" }, { "name":"BN406_01507 purQ; phosphoribosylformylglycinamidine synthase I\tK23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ \/ glutaminase [EC:6.3.5.3 3.5.1.2]" }, { "name":"BN406_00918 purM; phosphoribosylaminoimidazole synthetase\tK01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]" }, { "name":"BN406_02644 purK; N5-carboxyaminoimidazole ribonucleotide synthase\tK01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]" }, { "name":"BN406_02643 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit protein\tK01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]" }, { "name":"BN406_01505 purC; phosphoribosylaminoimidazole-succinocarboxamidesynthase\tK01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]" }, { "name":"BN406_01500 purB; Adenylosuccinate lyase\tK01756 purB; adenylosuccinate lyase [EC:4.3.2.2]" }, { "name":"BN406_03117 purH; bifunctionalphosphoribosylaminoimidazolecarboxam ide formyltransferase\/IMP cyclohydrolase\tK00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase \/ IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]" }, { "name":"BN406_02211 apt; adenine phosphoribosyltransferase\tK00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]" }, { "name":"BN406_02660 5'-nucleotidase precursor (signal peptide) protein\tK11751 ushA; 5'-nucleotidase \/ UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]" }, { "name":"BN406_01264 surE; stationary phase survival protein SurE\tK03787 surE; 5'\/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]" }, { "name":"BN406_03263 deoD; purine nucleoside phosphorylase\tK03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]" }, { "name":"BN406_02195 hypothetical protein\tK05810 LACC1; purine-nucleoside\/S-methyl-5'-thioadenosine phosphorylase \/ adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]" }, { "name":"BN406_02511 hpt; hypoxanthine-guanine phosphoribosyltransferase\tK00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]" }, { "name":"BN406_00417 guaB; Inosine-5'-monophosphate dehydrogenase\tK00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]" }, { "name":"BN406_00899 ndk; nucleoside diphosphate kinase\tK00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]" }, { "name":"BN406_00007 deoxyribonucleotide triphosphate pyrophosphatase\tK01519 rdgB; XTP\/dITP diphosphohydrolase [EC:3.6.1.66]" }, { "name":"BN406_01376 gpt; xanthine-guanine phosphoribosyltransferase\tK00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]" }, { "name":"BN406_06526 dehydrogenase\tK00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4]" }, { "name":"BN406_05535 xanthine dehydrogenase small subunit\tK13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]" }, { "name":"BN406_05867 xanthine dehydrogenase small subunit\tK13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]" }, { "name":"BN406_05534 XDH1; Xanthine dehydrogenase\/oxidase\tK13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]" }, { "name":"BN406_05866 XDH3; Xanthine dehydrogenase\/oxidase\tK13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]" }, { "name":"BN406_03527 yagR; Putative xanthine dehydrogenase YagR molybdenum-binding subunit\tK11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]" }, { "name":"BN406_05669 xanthine dehydrogenase\tK11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]" }, { "name":"BN406_05745 yagR; Putative xanthine dehydrogenase YagR molybdenum-binding subunit\tK11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]" }, { "name":"BN406_06277 xanthine dehydrogenase\tK11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]" }, { "name":"BN406_03528 yagS; Putative xanthine dehydrogenase YagS FAD-binding subunit\tK11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]" }, { "name":"BN406_05668 yagS1; Putative xanthine dehydrogenase YagS FAD-binding subunit\tK11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]" }, { "name":"BN406_05746 yagS3; Putative xanthine dehydrogenase YagS FAD-binding subunit\tK11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]" }, { "name":"BN406_06276 yagS5; Putative xanthine dehydrogenase YagS FAD-binding subunit\tK11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]" }, { "name":"BN406_03529 yagT; Putative xanthine dehydrogenase yagT iron-sulfur-binding subunit\tK13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit" }, { "name":"BN406_05667 aldehyde or xanthine dehydrogenase, iron-sulfur subunit protein\tK13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit" }, { "name":"BN406_05747 yagT; Putative xanthine dehydrogenase yagT iron-sulfur-binding subunit\tK13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit" }, { "name":"BN406_06275 oxidoreductase\tK13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit" }, { "name":"BN406_02940 glutamine amidotransferase\tK01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]" }, { "name":"BN406_03445 guaA; GMP synthase [glutamine-hydrolyzing]\tK01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]" }, { "name":"BN406_05530 guaD1; Guanine deaminase\tK01487 guaD; guanine deaminase [EC:3.5.4.3]" }, { "name":"BN406_05860 guaD3; Guanine deaminase\tK01487 guaD; guanine deaminase [EC:3.5.4.3]" }, { "name":"BN406_00883 gmk; Guanylate kinase\tK00942 gmk; guanylate kinase [EC:2.7.4.8]" }, { "name":"BN406_01288 nrd; ribonucleotide-diphosphate reductase subunit alpha\tK00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]" }, { "name":"BN406_01253 deoxyguanosinetriphosphate triphosphohydrolase-like protein\tK01129 dgt; dGTPase [EC:3.1.5.1]" }, { "name":"BN406_00839 hypothetical protein\tK06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]" }, { "name":"BN406_00800 relA; GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein\tK01139 spoT; GTP diphosphokinase \/ guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]" }, { "name":"BN406_00412 Ppx\/GppA phosphatase\tK01524 ppx-gppA; exopolyphosphatase \/ guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]" }, { "name":"BN406_00922 hypothetical protein\tK01524 ppx-gppA; exopolyphosphatase \/ guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]" }, { "name":"BN406_00119 cyaD1; adenylate cyclase transmembrane protein\tK01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]" }, { "name":"BN406_00224 cyaE1; putative adenylate cyclase transmembrane protein\tK01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]" }, { "name":"BN406_00924 cya2; Adenylate cyclase 2\tK01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]" }, { "name":"BN406_01691 cyaD2; adenylate\/guanylate cyclase transmembrane protein\tK01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]" }, { "name":"BN406_02300 cyaC; adenylate cyclase transmembrane protein\tK01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]" }, { "name":"BN406_02627 cyaF2; adenylate\/guanylate cyclase\tK01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]" }, { "name":"BN406_02715 cyaG1; adenylate\/guanylate cyclase\tK01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]" }, { "name":"BN406_02851 cyaF1; adenylate cyclase\tK01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]" }, { "name":"BN406_03391 cya1; Adenylate cyclase 1\tK01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]" }, { "name":"BN406_03523 adenylate\/guanylate cyclase\tK01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]" }, { "name":"BN406_04052 cyaN; guanylate cyclase\tK01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]" }, { "name":"BN406_04598 cya3; Putative adenylate cyclase 3\tK01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]" }, { "name":"BN406_05231 adenylate\/guanylate cyclase with Chase sensor\tK01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]" }, { "name":"BN406_05286 adenylate\/guanylate cyclase\tK01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]" }, { "name":"BN406_05893 adenylate\/guanylate cyclase\tK01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]" }, { "name":"BN406_06155 cya3; Putative adenylate cyclase 3\tK01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]" }, { "name":"BN406_06365 adenylate\/guanylate cyclase\tK01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]" }, { "name":"BN406_02585 purA; adenylosuccinate synthetase\tK01939 purA; adenylosuccinate synthase [EC:6.3.4.4]" }, { "name":"BN406_03266 add; adenosine deaminase\tK01488 add; adenosine deaminase [EC:3.5.4.4]" }, { "name":"BN406_00701 amn; AMP nucleosidase\tK01241 amn; AMP nucleosidase [EC:3.2.2.4]" }, { "name":"BN406_02254 ade1; Adenine deaminase 1\tK01486 ade; adenine deaminase [EC:3.5.4.2]" }, { "name":"BN406_04676 ade3; Adenine deaminase 3\tK01486 ade; adenine deaminase [EC:3.5.4.2]" }, { "name":"BN406_04678 ade4; Adenine deaminase 4\tK01486 ade; adenine deaminase [EC:3.5.4.2]" }, { "name":"BN406_05874 ade2; Adenine deaminase 2\tK01486 ade; adenine deaminase [EC:3.5.4.2]" }, { "name":"BN406_01364 yfkN; Trifunctional nucleotide phosphoesterase protein YfkN\tK01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase \/ 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]" }, { "name":"BN406_02614 hypothetical protein\tK09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]" }, { "name":"BN406_01108 adk; Adenylate kinase\tK00939 adk; adenylate kinase [EC:2.7.4.3]" }, { "name":"BN406_01198 mazG; nucleoside triphosphate pyrophosphohydrolase\tK04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]" }, { "name":"BN406_00116 hypothetical protein\tK03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]" }, { "name":"BN406_04266 nodQ; Bifunctional enzyme NodQ\tK00955 cysNC; bifunctional enzyme CysN\/CysC [EC:2.7.7.4 2.7.1.25]" }, { "name":"BN406_05924 nodQ; Bifunctional enzyme NodQ\tK00955 cysNC; bifunctional enzyme CysN\/CysC [EC:2.7.7.4 2.7.1.25]" }, { "name":"BN406_00598 cysN; Sulfate adenylyltransferase subunit 1\tK00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]" }, { "name":"BN406_00599 cysD; Sulfate adenylyltransferase subunit 2\tK00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]" }, { "name":"BN406_04265 nodP; Sulfate adenylyltransferase subunit 2\tK00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]" }, { "name":"BN406_05925 nodP; Sulfate adenylyltransferase subunit 2\tK00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]" }, { "name":"BN406_06385 hypothetical protein\tK22879 hpyO; FAD-dependent urate hydroxylase [EC:1.14.13.113]" }, { "name":"BN406_05507 5-hydroxyisourate hydrolase 2\tK07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]" }, { "name":"BN406_05868 5-hydroxyisourate hydrolase 1\tK07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]" }, { "name":"BN406_05505 hypothetical protein\tK13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]" }, { "name":"BN406_02452 hyuE; Hydantoin racemase\tK16841 hpxA; allantoin racemase [EC:5.1.99.3]" }, { "name":"BN406_04633 hyuE; Hydantoin racemase\tK16841 hpxA; allantoin racemase [EC:5.1.99.3]" }, { "name":"BN406_03768 unnamed protein product\tK01466 allB; allantoinase [EC:3.5.2.5]" }, { "name":"BN406_03933 allB; Allantoinase\tK01466 allB; allantoinase [EC:3.5.2.5]" }, { "name":"BN406_05504 cda1; Chitin deacetylase 1\tK16842 hpxB; allantoinase [EC:3.5.2.5]" }, { "name":"BN406_05869 urate catabolism protein\tK16842 hpxB; allantoinase [EC:3.5.2.5]" }, { "name":"BN406_05870 allantoicase\tK01477 alc; allantoicase [EC:3.5.3.4]" }, { "name":"BN406_05308 hypothetical protein\tK14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]" }, { "name":"BN406_05315 allA2; Ureidoglycolate hydrolase 2\tK01483 allA; ureidoglycolate lyase [EC:4.3.2.3]" }, { "name":"BN406_05506 allA1; Ureidoglycolate hydrolase 1\tK01483 allA; ureidoglycolate lyase [EC:4.3.2.3]" }, { "name":"BN406_02319 ureC; Urease subunit alpha\tK01428 ureC; urease subunit alpha [EC:3.5.1.5]" }, { "name":"BN406_02322 ureB; Urease subunit beta\tK01429 ureB; urease subunit beta [EC:3.5.1.5]" }, { "name":"BN406_02324 ureA; urease subunit gamma\tK01430 ureA; urease subunit gamma [EC:3.5.1.5]" }, { "name":"BN406_04165 arcC; carbamate kinase\tK00926 arcC; carbamate kinase [EC:2.7.2.2]" } ] }, { "name":"00240 Pyrimidine metabolism [PATH:smi00240]", "children":[ { "name":"BN406_01309 carB; Carbamoyl-phosphate synthase large chain\tK01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]" }, { "name":"BN406_05921 carbamoyl phosphate synthase-like protein\tK01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]" }, { "name":"BN406_02171 carA; Carbamoyl-phosphate synthase small chain\tK01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]" }, { "name":"BN406_01038 pyrB; Aspartate carbamoyltransferase\tK00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]" }, { "name":"BN406_00128 pyrC1; dihydroorotase\tK01465 URA4; dihydroorotase [EC:3.5.2.3]" }, { "name":"BN406_01037 pyrC3; Dihydroorotase\tK01465 URA4; dihydroorotase [EC:3.5.2.3]" }, { "name":"BN406_00183 pyrD; Dihydroorotate dehydrogenase (quinone)\tK00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]" }, { "name":"BN406_00129 pyrE; orotate phosphoribosyltransferase\tK00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]" }, { "name":"BN406_03463 pyrF; orotidine 5'-phosphate decarboxylase\tK01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]" }, { "name":"BN406_01229 pyrH; Uridylate kinase\tK09903 pyrH; uridylate kinase [EC:2.7.4.22]" }, { "name":"BN406_00899 ndk; nucleoside diphosphate kinase\tK00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]" }, { "name":"BN406_01198 mazG; nucleoside triphosphate pyrophosphohydrolase\tK04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]" }, { "name":"BN406_00232 Maf-like protein R00615\tK06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]" }, { "name":"BN406_03138 Maf-like protein R00002\tK06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]" }, { "name":"BN406_01172 pyrG; CTP synthetase\tK01937 pyrG; CTP synthase [EC:6.3.4.2]" }, { "name":"BN406_03385 cmk; Cytidylate kinase\tK00945 cmk; CMP\/dCMP kinase [EC:2.7.4.25]" }, { "name":"BN406_02660 5'-nucleotidase precursor (signal peptide) protein\tK11751 ushA; 5'-nucleotidase \/ UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]" }, { "name":"BN406_01264 surE; stationary phase survival protein SurE\tK03787 surE; 5'\/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]" }, { "name":"BN406_03265 upp; uracil phosphoribosyltransferase\tK00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]" }, { "name":"BN406_01364 yfkN; Trifunctional nucleotide phosphoesterase protein YfkN\tK01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase \/ 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]" }, { "name":"BN406_02614 hypothetical protein\tK09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]" }, { "name":"BN406_01534 hypothetical protein\tK16329 psuG; pseudouridylate synthase [EC:4.2.1.70]" }, { "name":"BN406_03262 cdd; cytidine deaminase\tK01489 cdd; cytidine deaminase [EC:3.5.4.5]" }, { "name":"BN406_03516 codA; Cytosine deaminase\tK01485 codA; cytosine\/creatinine deaminase [EC:3.5.4.1 3.5.4.21]" }, { "name":"BN406_06530 cytosine deaminase\tK01485 codA; cytosine\/creatinine deaminase [EC:3.5.4.1 3.5.4.21]" }, { "name":"BN406_00156 2'-deoxycytidine 5'-triphosphate deaminase\tK01494 dcd; dCTP deaminase [EC:3.5.4.13]" }, { "name":"BN406_01288 nrd; ribonucleotide-diphosphate reductase subunit alpha\tK00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]" }, { "name":"BN406_00839 hypothetical protein\tK06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]" }, { "name":"BN406_01339 tmk; thymidylate kinase\tK00943 tmk; dTMP kinase [EC:2.7.4.9]" }, { "name":"BN406_03476 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase\tK01520 dut; dUTP diphosphatase [EC:3.6.1.23]" }, { "name":"BN406_03264 deoA; Thymidine phosphorylase\tK00758 deoA; thymidine phosphorylase [EC:2.4.2.4]" }, { "name":"BN406_02246 tdk; thymidine kinase\tK00857 tdk; thymidine kinase [EC:2.7.1.21]" }, { "name":"BN406_01950 thyA; thymidylate synthase\tK00560 thyA; thymidylate synthase [EC:2.1.1.45]" }, { "name":"BN406_02296 oxidoreductase\tK17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]" }, { "name":"BN406_02297 dihydropyrimidine dehydrogenase\tK17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]" }, { "name":"BN406_02303 dht; D-hydantoinase\/dihydropyrimidinase\tK01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]" }, { "name":"BN406_02302 allantoate amidohydrolase\tK06016 pydC; beta-ureidopropionase \/ N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]" }, { "name":"BN406_03705 aminohydrolase\tK06016 pydC; beta-ureidopropionase \/ N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]" }, { "name":"BN406_04912 atcC; N-carbamyl-L-cysteine amidohydrolase\tK06016 pydC; beta-ureidopropionase \/ N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]" }, { "name":"BN406_02432 hypothetical protein\tK09020 rutB; ureidoacrylate peracid hydrolase [EC:3.5.1.110]" } ] } ] }, { "name":"09105 Amino acid metabolism", "children":[ { "name":"00250 Alanine, aspartate and glutamate metabolism [PATH:smi00250]", "children":[ { "name":"BN406_02175 aatA; Aspartate aminotransferase A\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_03087 aatB; Aspartate aminotransferase B\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_03964 aatB; Aspartate aminotransferase B\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_00830 nadB; L-aspartate oxidase\tK00278 nadB; L-aspartate oxidase [EC:1.4.3.16]" }, { "name":"BN406_01902 aspartate racemase\tK01779 racD; aspartate racemase [EC:5.1.1.13]" }, { "name":"BN406_05340 asparagine synthase\tK01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]" }, { "name":"BN406_06204 asnO; protein AsnO\tK01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]" }, { "name":"BN406_03708 aminotransferase, class V superfamily\tK00830 AGXT; alanine-glyoxylate transaminase \/ serine-glyoxylate transaminase \/ serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]" }, { "name":"BN406_04551 Agxt; Serine--pyruvate aminotransferase, mitochondrial\tK00830 AGXT; alanine-glyoxylate transaminase \/ serine-glyoxylate transaminase \/ serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]" }, { "name":"BN406_01362 ald; Alanine dehydrogenase\tK00259 ald; alanine dehydrogenase [EC:1.4.1.1]" }, { "name":"BN406_03010 argG; Argininosuccinate synthase\tK01940 argG; argininosuccinate synthase [EC:6.3.4.5]" }, { "name":"BN406_02505 argH1; Argininosuccinate lyase 1\tK01755 argH; argininosuccinate lyase [EC:4.3.2.1]" }, { "name":"BN406_05976 argH2; Argininosuccinate lyase 2\tK01755 argH; argininosuccinate lyase [EC:4.3.2.1]" }, { "name":"BN406_02585 purA; adenylosuccinate synthetase\tK01939 purA; adenylosuccinate synthase [EC:6.3.4.4]" }, { "name":"BN406_01500 purB; Adenylosuccinate lyase\tK01756 purB; adenylosuccinate lyase [EC:4.3.2.2]" }, { "name":"BN406_01038 pyrB; Aspartate carbamoyltransferase\tK00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]" }, { "name":"BN406_05806 puuE; 4-aminobutyrate aminotransferase PuuE\tK00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]" }, { "name":"BN406_04030 GABA-TP3; Gamma aminobutyrate transaminase 3, chloroplastic\tK16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]" }, { "name":"BN406_06293 GABA-TP3; Gamma aminobutyrate transaminase 3, chloroplastic\tK16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]" }, { "name":"BN406_03150 gabD; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_04033 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_04224 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_04759 gabD5; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_04937 gabD7; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_05807 gabD1; putative succinate-semialdehyde dehydrogenase [NADP(+)]\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_06294 aldehyde dehydrogenase\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_06688 gabD; putative succinate-semialdehyde dehydrogenase [NADP(+)]\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_02669 gltB; Ferredoxin-dependent glutamate synthase 1\tK00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]" }, { "name":"BN406_02668 Putative glutamate synthase [NADPH]\tK00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]" }, { "name":"BN406_03115 hypothetical protein\tK15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]" }, { "name":"BN406_04955 gdhA; glutamate dehydrogenase\tK00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]" }, { "name":"BN406_00114 putA; Bifunctional protein putA\tK13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor \/ proline dehydrogenase \/ delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]" }, { "name":"BN406_00321 glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_01379 glnA; Glutamine synthetase 1\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_02037 hypothetical protein\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_02355 glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_02429 glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_03224 glnT; Glutamine synthetase 3\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_05261 glnII; Glutamine synthetase 2\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_01309 carB; Carbamoyl-phosphate synthase large chain\tK01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]" }, { "name":"BN406_05921 carbamoyl phosphate synthase-like protein\tK01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]" }, { "name":"BN406_02171 carA; Carbamoyl-phosphate synthase small chain\tK01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]" }, { "name":"BN406_01519 glsA; glutaminase\tK01425 glsA; glutaminase [EC:3.5.1.2]" }, { "name":"BN406_01507 purQ; phosphoribosylformylglycinamidine synthase I\tK23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ \/ glutaminase [EC:6.3.5.3 3.5.1.2]" }, { "name":"BN406_01408 glmS; Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]" }, { "name":"BN406_03332 hypothetical protein\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]" }, { "name":"BN406_04280 glmS; Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]" }, { "name":"BN406_00860 purF; Amidophosphoribosyltransferase\tK00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]" }, { "name":"BN406_02439 aminotransferase\tK29020 E5.1.1.15; 2-aminohexano-6-lactam racemase [EC:5.1.1.15]" } ] }, { "name":"00260 Glycine, serine and threonine metabolism [PATH:smi00260]", "children":[ { "name":"BN406_02471 lysC; Aspartokinase\tK00928 lysC; aspartate kinase [EC:2.7.2.4]" }, { "name":"BN406_03111 asd; aspartate-semialdehyde dehydrogenase\tK00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]" }, { "name":"BN406_01464 homoserine dehydrogenase\tK00003 hom; homoserine dehydrogenase [EC:1.1.1.3]" }, { "name":"BN406_00568 thrB; Homoserine kinase\tK02204 thrB2; homoserine kinase type II [EC:2.7.1.39]" }, { "name":"BN406_00577 thrC; Threonine synthase\tK01733 thrC; threonine synthase [EC:4.2.3.1]" }, { "name":"BN406_02670 low specificity L-threonine aldolase\tK01620 ltaE; threonine aldolase [EC:4.1.2.48]" }, { "name":"BN406_00943 glyA1; Serine hydroxymethyltransferase 1\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" }, { "name":"BN406_03708 aminotransferase, class V superfamily\tK00830 AGXT; alanine-glyoxylate transaminase \/ serine-glyoxylate transaminase \/ serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]" }, { "name":"BN406_04551 Agxt; Serine--pyruvate aminotransferase, mitochondrial\tK00830 AGXT; alanine-glyoxylate transaminase \/ serine-glyoxylate transaminase \/ serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]" }, { "name":"BN406_03285 hydroxyacid dehydrogenase\tK12972 ghrA; glyoxylate\/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]" }, { "name":"BN406_04755 hydroxypyruvate reductase\tK12972 ghrA; glyoxylate\/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]" }, { "name":"BN406_03090 ttuD; Putative hydroxypyruvate reductase\tK11529 gck; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"BN406_04503 ttuD; Putative hydroxypyruvate reductase\tK11529 gck; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"BN406_05314 ttuD; Putative hydroxypyruvate reductase\tK11529 gck; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"BN406_03295 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase\tK01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]" }, { "name":"BN406_02058 oxidoreductase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"BN406_02405 oxidoreductase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"BN406_02587 serA; D-3-phosphoglycerate dehydrogenase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"BN406_04465 glyoxylate reductase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"BN406_06742 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"BN406_02588 serC; phosphoserine aminotransferase\tK00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]" }, { "name":"BN406_01941 serB; phosphoserine phosphatase\tK01079 serB; phosphoserine phosphatase [EC:3.1.3.3]" }, { "name":"BN406_02167 Putative 8-amino-7-oxononanoate synthase\/2-amino-3-ketobutyrate coenzyme A ligase\tK00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]" }, { "name":"BN406_02166 tdh; L-threonine 3-dehydrogenase\tK00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]" }, { "name":"BN406_02845 hemA; 5-aminolevulinate synthase\tK00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]" }, { "name":"BN406_04785 hemA; 5-aminolevulinate synthase\tK00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]" }, { "name":"BN406_01279 gcvP; glycine dehydrogenase\tK00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]" }, { "name":"BN406_01281 gcvT; Aminomethyltransferase, mitochondrial\tK00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]" }, { "name":"BN406_01183 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02792 lpdV; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02904 LPD2; Dihydrolipoyl dehydrogenase 2, mitochondrial\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_06654 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_01280 gcvH; glycine cleavage system protein H\tK02437 gcvH; glycine cleavage system H protein" }, { "name":"BN406_00858 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase transmembrane protein\tK17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]" }, { "name":"BN406_00603 betA; Choline dehydrogenase\tK00108 betA; choline dehydrogenase [EC:1.1.99.1]" }, { "name":"BN406_00604 betB1; Betaine aldehyde dehydrogenase 1\tK00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]" }, { "name":"BN406_03854 ALDH10A9; Betaine aldehyde dehydrogenase 2, mitochondrial\tK00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]" }, { "name":"BN406_04688 betB2; Betaine aldehyde dehydrogenase 2\tK00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]" }, { "name":"BN406_00524 putative dioxygenase Rieske 2Fe-2S family protein\tK00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251]" }, { "name":"BN406_00525 oxidoreductase FAD\/NAD(P)-binding domain-containing protein\tK21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251]" }, { "name":"BN406_02099 dimethylglycine dehydrogenase\tK00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]" }, { "name":"BN406_04544 dimethylglycine dehydrogenase\tK00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]" }, { "name":"BN406_02709 soxA1; Sarcosine oxidase subunit alpha\tK00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]" }, { "name":"BN406_02711 soxB1; Sarcosine oxidase subunit beta\tK00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]" }, { "name":"BN406_02708 soxG2; sarcosine oxidase subunit gamma\tK00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]" }, { "name":"BN406_02710 soxD2; sarcosine oxidase subunit delta\tK00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]" }, { "name":"BN406_01140 sda; L-serine dehydratase\tK01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]" }, { "name":"BN406_01366 ilvA; L-threonine dehydratase biosynthetic IlvA\tK01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]" }, { "name":"BN406_04018 putative threonine dehydratase\tK01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]" }, { "name":"BN406_04773 tdcB; L-threonine dehydratase catabolic TdcB\tK01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]" }, { "name":"BN406_06242 Putative threonine dehydratase\tK01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]" }, { "name":"BN406_06781 threonine dehydratase\tK01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]" }, { "name":"BN406_03164 trpA; tryptophan synthase subunit alpha\tK01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]" }, { "name":"BN406_03163 trpB; Tryptophan synthase beta chain\tK01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]" }, { "name":"BN406_06240 putative hydrolase\/peptidase y4tM\tK15783 doeA; ectoine hydrolase [EC:3.5.4.44]" }, { "name":"BN406_06239 ectoine utilization protein EutE\tK15784 doeB; N2-acetyl-L-2,4-diaminobutanoate deacetylase [EC:3.5.1.125]" }, { "name":"BN406_06251 putative aminotransferase y4uB\tK15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76]" }, { "name":"BN406_06250 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK15786 doeC; aspartate-semialdehyde dehydrogenase [EC:1.2.1.-]" } ] }, { "name":"00270 Cysteine and methionine metabolism [PATH:smi00270]", "children":[ { "name":"BN406_01215 cysE; Serine acetyltransferase\tK00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]" }, { "name":"BN406_01356 cysB; Cysteine synthase\tK01738 cysK; cysteine synthase [EC:2.5.1.47]" }, { "name":"BN406_03471 cysK1; O-acetylserine sulfhydrylase\tK01738 cysK; cysteine synthase [EC:2.5.1.47]" }, { "name":"BN406_01211 metC; Putative cystathionine beta-lyase\tK01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]" }, { "name":"BN406_04118 metC; Putative cystathionine beta-lyase\tK01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]" }, { "name":"BN406_01701 methionine synthase I\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"BN406_01716 methyltetrahydrofolate:corrinoid\/iron-sulfur protein methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"BN406_02836 metH; Methionine synthase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"BN406_00044 metK; S-adenosylmethionine synthetase\tK00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]" }, { "name":"BN406_04334 traI; Acyl-homoserine-lactone synthase\tK22955 traI; acyl homoserine lactone synthase [EC:2.3.1.184]" }, { "name":"BN406_06844 traI; putative acyl-homoserine-lactone synthase\tK22955 traI; acyl homoserine lactone synthase [EC:2.3.1.184]" }, { "name":"BN406_01572 autoinducer synthase\tK22968 sinI; acyl homoserine lactone synthase [EC:2.3.1.184]" }, { "name":"BN406_03446 pfs; 5'-methylthioadenosine\/S-adenosylhomocysteinenucleosidase\tK01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]" }, { "name":"BN406_05172 mtnK; methylthioribose kinase\tK00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]" }, { "name":"BN406_02195 hypothetical protein\tK05810 LACC1; purine-nucleoside\/S-methyl-5'-thioadenosine phosphorylase \/ adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]" }, { "name":"BN406_05171 mtnA; methylthioribose-1-phosphate isomerase\tK08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]" }, { "name":"BN406_03438 tatA3; Tyrosine aminotransferase\tK00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]" }, { "name":"BN406_02102 mdeA; methionine gamma-lyase\tK01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]" }, { "name":"BN406_03173 ahcY; S-adenosyl-L-homocysteine hydrolase\tK01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]" }, { "name":"BN406_02471 lysC; Aspartokinase\tK00928 lysC; aspartate kinase [EC:2.7.2.4]" }, { "name":"BN406_03111 asd; aspartate-semialdehyde dehydrogenase\tK00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]" }, { "name":"BN406_01464 homoserine dehydrogenase\tK00003 hom; homoserine dehydrogenase [EC:1.1.1.3]" }, { "name":"BN406_02980 metA; homoserine O-succinyltransferase\tK00651 metA; homoserine O-succinyltransferase\/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]" }, { "name":"BN406_03211 metB; Cystathionine gamma-synthase\tK01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]" }, { "name":"BN406_00984 O-acetylhomoserine (thiol)-lyase\tK01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]" }, { "name":"BN406_00155 metZ; O-succinylhomoserine sulfhydrylase\tK10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]" }, { "name":"BN406_00628 ilvE2; aminotransferase\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"BN406_03352 ilvE; putative branched-chain-amino-acid aminotransferase\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"BN406_00427 gsh1; glutamate--cysteine ligase precursor protein\tK01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2]" }, { "name":"BN406_02175 aatA; Aspartate aminotransferase A\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_03087 aatB; Aspartate aminotransferase B\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_03964 aatB; Aspartate aminotransferase B\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_01359 STR1; Thiosulfate\/3-mercaptopyruvate sulfurtransferase 1, mitochondrial\tK01011 TST; thiosulfate\/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]" }, { "name":"BN406_05676 thtR; sulfurtransferase\tK01011 TST; thiosulfate\/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]" }, { "name":"BN406_02912 mdh; malate dehydrogenase\tK00024 mdh; malate dehydrogenase [EC:1.1.1.37]" }, { "name":"BN406_04533 Dehydrogenase, malate\/L-lactate family\tK16844 comC; (2R)-3-sulfolactate dehydrogenase (NADP+) [EC:1.1.1.338]" }, { "name":"BN406_01140 sda; L-serine dehydratase\tK01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]" }, { "name":"BN406_02058 oxidoreductase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"BN406_02405 oxidoreductase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"BN406_02587 serA; D-3-phosphoglycerate dehydrogenase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"BN406_04465 glyoxylate reductase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"BN406_06742 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"BN406_02588 serC; phosphoserine aminotransferase\tK00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]" } ] }, { "name":"00280 Valine, leucine and isoleucine degradation [PATH:smi00280]", "children":[ { "name":"BN406_00628 ilvE2; aminotransferase\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"BN406_03352 ilvE; putative branched-chain-amino-acid aminotransferase\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"BN406_02789 bkdA1; 2-oxoisovalerate dehydrogenase subunit alpha\tK00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]" }, { "name":"BN406_02790 bkdA2; 2-oxoisovalerate dehydrogenase subunit beta\tK00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]" }, { "name":"BN406_05113 transketolase\tK11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]" }, { "name":"BN406_02791 bkdB; Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex\tK09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]" }, { "name":"BN406_01183 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02792 lpdV; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02904 LPD2; Dihydrolipoyl dehydrogenase 2, mitochondrial\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_06654 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02075 yngJ; putative acyl-CoA dehydrogenase YngJ\tK00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]" }, { "name":"BN406_05952 IVD1; Isovaleryl-CoA dehydrogenase 1, mitochondrial\tK00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]" }, { "name":"BN406_03498 fadB1; putative enoyl-CoA hydratase\tK01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]" }, { "name":"BN406_00165 fadB; putative fatty oxidation complex alpha subunit\tK01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase \/ enoyl-CoA hydratase \/ 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]" }, { "name":"BN406_05250 Pcca; Propionyl-CoA carboxylase alpha chain, mitochondrial\tK01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]" }, { "name":"BN406_05251 PCCB; Propionyl-CoA carboxylase beta chain, mitochondrial\tK01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]" }, { "name":"BN406_06793 bccA; Acetyl-\/propionyl-coenzyme A carboxylase alpha chain\tK11263 bccA; acetyl-CoA\/propionyl-CoA\/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]" }, { "name":"BN406_01017 methylmalonyl-CoA epimerase\tK05606 MCEE; methylmalonyl-CoA\/ethylmalonyl-CoA epimerase [EC:5.1.99.1]" }, { "name":"BN406_05249 bhbA; methylmalonyl-CoA mutase\tK01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]" }, { "name":"BN406_05255 mmsB; putative 3-hydroxyisobutyrate dehydrogenase\tK00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]" }, { "name":"BN406_00351 mmsA; Methylmalonate-semialdehyde dehydrogenase [acylating]\tK00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) \/ methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]" }, { "name":"BN406_02352 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03510 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03712 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_04757 aldA; Aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_05853 aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_05001 malonyl-CoA synthase\tK18661 matB; malonyl-CoA\/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]" }, { "name":"BN406_02253 Omega-amino acid--pyruvate aminotransferase\tK00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]" }, { "name":"BN406_03089 Omega-amino acid--pyruvate aminotransferase\tK00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]" }, { "name":"BN406_05949 MCCC1; Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial\tK01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]" }, { "name":"BN406_05951 Mccc2; Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial\tK01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]" }, { "name":"BN406_05947 eccH2; enoyl-CoA hydratase\tK13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]" }, { "name":"BN406_05948 HMGCL; Hydroxymethylglutaryl-CoA lyase, mitochondrial\tK01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]" }, { "name":"BN406_00344 acsA1; Acetoacetyl-coenzyme A synthetase\tK01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]" }, { "name":"BN406_00166 fadA; Putative acyltransferase Rv0859\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_00541 vraB; Putative acetyl-CoA C-acetyltransferase vraB\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_01442 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_03063 phbA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_04528 thlA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" } ] }, { "name":"00290 Valine, leucine and isoleucine biosynthesis [PATH:smi00290]", "children":[ { "name":"BN406_01366 ilvA; L-threonine dehydratase biosynthetic IlvA\tK01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]" }, { "name":"BN406_04018 putative threonine dehydratase\tK01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]" }, { "name":"BN406_04773 tdcB; L-threonine dehydratase catabolic TdcB\tK01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]" }, { "name":"BN406_06242 Putative threonine dehydratase\tK01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]" }, { "name":"BN406_06781 threonine dehydratase\tK01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]" }, { "name":"BN406_03006 leuC; 3-isopropylmalate dehydratase large subunit\tK01703 leuC; 3-isopropylmalate\/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]" }, { "name":"BN406_02977 leuD; 3-isopropylmalate dehydratase small subunit\tK01704 leuD; 3-isopropylmalate\/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]" }, { "name":"BN406_03106 leuB; 3-isopropylmalate dehydrogenase\tK00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]" }, { "name":"BN406_00202 ilvB1; hypothetical protein\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_01936 ilvI; Acetolactate synthase large subunit\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_02029 ilvG; thiamine pyrophosphate protein\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_03706 hypothetical protein\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_03874 Thiamine pyrophosphate-requiring protein\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_04001 Acetolactate synthase\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_01935 ilvH; acetolactate synthase 3 regulatory subunit\tK01653 E2.2.1.6S; acetolactate synthase I\/III small subunit [EC:2.2.1.6]" }, { "name":"BN406_01888 ilvC; ketol-acid reductoisomerase\tK00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]" }, { "name":"BN406_02684 ilvD; Dihydroxy-acid dehydratase\tK01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]" }, { "name":"BN406_00628 ilvE2; aminotransferase\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"BN406_03352 ilvE; putative branched-chain-amino-acid aminotransferase\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"BN406_00852 putative AIPM\/Hcit synthase family transferase aq_356\tK01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]" }, { "name":"BN406_02230 leuA; 2-isopropylmalate synthase\tK01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]" } ] }, { "name":"00300 Lysine biosynthesis [PATH:smi00300]", "children":[ { "name":"BN406_01464 homoserine dehydrogenase\tK00003 hom; homoserine dehydrogenase [EC:1.1.1.3]" }, { "name":"BN406_02471 lysC; Aspartokinase\tK00928 lysC; aspartate kinase [EC:2.7.2.4]" }, { "name":"BN406_03111 asd; aspartate-semialdehyde dehydrogenase\tK00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]" }, { "name":"BN406_00794 dapA; Dihydrodipicolinate synthase\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"BN406_03767 dihydrodipicolinate synthetase\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"BN406_03851 dihydrodipicolinate synthase\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"BN406_04169 dihydrodipicolinate synthase\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"BN406_05359 dihydrodipicolinate synthase\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"BN406_06518 dapA2; dihydrodipicolinate synthase\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"BN406_03294 dapB; dihydrodipicolinate reductase\tK00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]" }, { "name":"BN406_00064 dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase\tK00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]" }, { "name":"BN406_00150 argD; Acetylornithine aminotransferase\tK00821 argD; acetylornithine\/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]" }, { "name":"BN406_00056 dapE; Succinyl-diaminopimelate desuccinylase\tK01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]" }, { "name":"BN406_03040 dapF; diaminopimelate epimerase\tK01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]" }, { "name":"BN406_02507 lysA; Diaminopimelate decarboxylase\tK01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]" }, { "name":"BN406_06110 decarboxylase\tK01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]" }, { "name":"BN406_02004 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase\tK01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]" }, { "name":"BN406_02003 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate\/D-alanyl-D-alanyl ligase\tK01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]" } ] }, { "name":"00310 Lysine degradation [PATH:smi00310]", "children":[ { "name":"BN406_03086 alh-9; Putative aldehyde dehydrogenase family 7 member A1 homolog\tK26061 amaB; L-aminoadipate-semialdehyde dehydrogenase" }, { "name":"BN406_02908 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex\tK00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]" }, { "name":"BN406_05114 dihydrolipoyllysine-residue succinyltransferase\tK00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]" }, { "name":"BN406_01183 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02792 lpdV; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02904 LPD2; Dihydrolipoyl dehydrogenase 2, mitochondrial\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_06654 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_05811 putative glutaryl-CoA dehydrogenase, mitochondrial\tK00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]" }, { "name":"BN406_03498 fadB1; putative enoyl-CoA hydratase\tK01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]" }, { "name":"BN406_00165 fadB; putative fatty oxidation complex alpha subunit\tK01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase \/ enoyl-CoA hydratase \/ 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]" }, { "name":"BN406_00166 fadA; Putative acyltransferase Rv0859\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_00541 vraB; Putative acetyl-CoA C-acetyltransferase vraB\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_01442 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_03063 phbA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_04528 thlA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_02092 prr; Gamma-aminobutyraldehyde dehydrogenase\tK00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]" }, { "name":"BN406_03150 gabD; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_04033 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_04224 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_04759 gabD5; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_04937 gabD7; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_05807 gabD1; putative succinate-semialdehyde dehydrogenase [NADP(+)]\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_06294 aldehyde dehydrogenase\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_06688 gabD; putative succinate-semialdehyde dehydrogenase [NADP(+)]\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_06555 lhgO; L-2-hydroxyglutarate oxidase LhgO\tK15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]" }, { "name":"BN406_03084 hypothetical protein\tK25986 ydcJ; 2-oxoadipate dioxygenase\/decarboxylase [EC:1.13.11.93]" }, { "name":"BN406_05810 CaiB\/baiF CoA-transferase family protein DDB_G0269880\tK01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]" }, { "name":"BN406_03407 hypothetical protein\tK01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]" }, { "name":"BN406_01195 D-amino-acid transaminase\tK00824 dat; D-alanine transaminase [EC:2.6.1.21]" }, { "name":"BN406_05037 D-amino-acid transaminase\tK00824 dat; D-alanine transaminase [EC:2.6.1.21]" }, { "name":"BN406_00369 oxidoreductase\tK26064 amaD; D-lysine oxidase" }, { "name":"BN406_06405 putative oxidoreductase PA1252\tK13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21]" }, { "name":"BN406_02033 oxidoreductase\tK26065 amaA; L-pipecolate oxidase" }, { "name":"BN406_02352 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03510 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03712 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_04757 aldA; Aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_05853 aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" } ] }, { "name":"00220 Arginine biosynthesis [PATH:smi00220]", "children":[ { "name":"BN406_00151 argF; Ornithine carbamoyltransferase\tK00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]" }, { "name":"BN406_04164 arcB; Ornithine carbamoyltransferase, catabolic\tK00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]" }, { "name":"BN406_03010 argG; Argininosuccinate synthase\tK01940 argG; argininosuccinate synthase [EC:6.3.4.5]" }, { "name":"BN406_02505 argH1; Argininosuccinate lyase 1\tK01755 argH; argininosuccinate lyase [EC:4.3.2.1]" }, { "name":"BN406_05976 argH2; Argininosuccinate lyase 2\tK01755 argH; argininosuccinate lyase [EC:4.3.2.1]" }, { "name":"BN406_02859 arcB; Arginase\tK01476 rocF; arginase [EC:3.5.3.1]" }, { "name":"BN406_04674 Arginase\/agmatinase\/formiminoglutamase\tK01476 rocF; arginase [EC:3.5.3.1]" }, { "name":"BN406_02319 ureC; Urease subunit alpha\tK01428 ureC; urease subunit alpha [EC:3.5.1.5]" }, { "name":"BN406_02322 ureB; Urease subunit beta\tK01429 ureB; urease subunit beta [EC:3.5.1.5]" }, { "name":"BN406_02324 ureA; urease subunit gamma\tK01430 ureA; urease subunit gamma [EC:3.5.1.5]" }, { "name":"BN406_04163 arcA1; Arginine deiminase 1\tK01478 arcA; arginine deiminase [EC:3.5.3.6]" }, { "name":"BN406_04643 arcA2; Arginine deiminase 2\tK01478 arcA; arginine deiminase [EC:3.5.3.6]" }, { "name":"BN406_01519 glsA; glutaminase\tK01425 glsA; glutaminase [EC:3.5.1.2]" }, { "name":"BN406_01507 purQ; phosphoribosylformylglycinamidine synthase I\tK23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ \/ glutaminase [EC:6.3.5.3 3.5.1.2]" }, { "name":"BN406_00321 glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_01379 glnA; Glutamine synthetase 1\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_02037 hypothetical protein\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_02355 glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_02429 glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_03224 glnT; Glutamine synthetase 3\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_05261 glnII; Glutamine synthetase 2\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_01309 carB; Carbamoyl-phosphate synthase large chain\tK01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]" }, { "name":"BN406_05921 carbamoyl phosphate synthase-like protein\tK01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]" }, { "name":"BN406_02171 carA; Carbamoyl-phosphate synthase small chain\tK01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]" }, { "name":"BN406_04165 arcC; carbamate kinase\tK00926 arcC; carbamate kinase [EC:2.7.2.2]" }, { "name":"BN406_03115 hypothetical protein\tK15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]" }, { "name":"BN406_04955 gdhA; glutamate dehydrogenase\tK00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]" }, { "name":"BN406_02175 aatA; Aspartate aminotransferase A\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_03087 aatB; Aspartate aminotransferase B\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_03964 aatB; Aspartate aminotransferase B\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_02483 argJ; bifunctional ornithine acetyltransferase\/N-acetylglutamate synthase\tK00620 argJ; glutamate N-acetyltransferase \/ amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]" }, { "name":"BN406_00070 argB; acetylglutamate kinase\tK00930 argB; acetylglutamate kinase [EC:2.7.2.8]" }, { "name":"BN406_00976 argC; N-acetyl-gamma-glutamyl-phosphate reductase\tK00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]" }, { "name":"BN406_00150 argD; Acetylornithine aminotransferase\tK00821 argD; acetylornithine\/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]" }, { "name":"BN406_00373 acetylornithine deacetylase\/succinyl-diaminopimelate desuccinylase\tK01438 argE; acetylornithine deacetylase [EC:3.5.1.16]" }, { "name":"BN406_04754 acetylornithine deacetylase ArgE\tK01438 argE; acetylornithine deacetylase [EC:3.5.1.16]" } ] }, { "name":"00330 Arginine and proline metabolism [PATH:smi00330]", "children":[ { "name":"BN406_02725 hypothetical protein\tK01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]" }, { "name":"BN406_03516 codA; Cytosine deaminase\tK01485 codA; cytosine\/creatinine deaminase [EC:3.5.4.1 3.5.4.21]" }, { "name":"BN406_06530 cytosine deaminase\tK01485 codA; cytosine\/creatinine deaminase [EC:3.5.4.1 3.5.4.21]" }, { "name":"BN406_03962 5-oxoprolinase\tK01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]" }, { "name":"BN406_04040 hypothetical protein\tK01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]" }, { "name":"BN406_06746 5-oxoprolinase (ATP-hydrolyzing)\tK01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]" }, { "name":"BN406_03963 5-oxoprolinase\tK01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]" }, { "name":"BN406_06747 5-oxoprolinase (ATP-hydrolyzing)\tK01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]" }, { "name":"BN406_04154 decarboxylase (lysine, ornithine, arginine)\tK01584 adiA; arginine decarboxylase [EC:4.1.1.19]" }, { "name":"BN406_00977 speB; Agmatinase\tK01480 speB; agmatinase [EC:3.5.3.11]" }, { "name":"BN406_02731 ornithine, DAP, or arginine decarboxylase\tK01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]" }, { "name":"BN406_04153 speF; Ornithine decarboxylase\tK01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]" }, { "name":"BN406_05157 nspC; carboxynorspermidine decarboxylase\tK13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]" }, { "name":"BN406_04763 Adenosylmethionine--8-amino-7-oxononanoatetransaminase\tK12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]" }, { "name":"BN406_02352 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03510 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03712 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_04757 aldA; Aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_05853 aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_02092 prr; Gamma-aminobutyraldehyde dehydrogenase\tK00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]" }, { "name":"BN406_00201 aminotransferase\tK12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84]" }, { "name":"BN406_03520 Amidase\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_04031 6-aminohexanoate-cyclic-dimer hydrolase\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_04489 amidase\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_06699 hypothetical protein\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_06704 hypothetical protein\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_00320 ordL; putative oxidoreductase OrdL\tK09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]" }, { "name":"BN406_02354 puuB; Gamma-glutamylputrescine oxidoreductase\tK09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]" }, { "name":"BN406_02817 ordL3; oxidoreductase\tK09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]" }, { "name":"BN406_03690 ooxA1; Opine oxidase subunit A\tK24954 ooxA; octopine oxidase subunit A" }, { "name":"BN406_03993 ooxA3; Opine oxidase subunit A\tK24954 ooxA; octopine oxidase subunit A" }, { "name":"BN406_03688 ooxB1; Opine oxidase subunit B\tK24955 ooxB; octopine oxidase subunit B" }, { "name":"BN406_03995 ooxB3; Opine oxidase subunit B\tK24955 ooxB; octopine oxidase subunit B" }, { "name":"BN406_02859 arcB; Arginase\tK01476 rocF; arginase [EC:3.5.3.1]" }, { "name":"BN406_04674 Arginase\/agmatinase\/formiminoglutamase\tK01476 rocF; arginase [EC:3.5.3.1]" }, { "name":"BN406_02190 proC; pyrroline-5-carboxylate reductase\tK00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]" }, { "name":"BN406_05130 proC; putative pyrroline-5-carboxylate reductase protein\tK00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]" }, { "name":"BN406_00114 putA; Bifunctional protein putA\tK13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor \/ proline dehydrogenase \/ delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]" }, { "name":"BN406_05372 arcB; Ornithine cyclodeaminase\tK01750 ocd; ornithine cyclodeaminase [EC:4.3.1.12]" }, { "name":"BN406_02958 proB1; Glutamate 5-kinase 1\tK00931 proB; glutamate 5-kinase [EC:2.7.2.11]" }, { "name":"BN406_02959 proA; gamma-glutamyl phosphate reductase\tK00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]" }, { "name":"BN406_00851 pip; Proline iminopeptidase\tK01259 pip; proline iminopeptidase [EC:3.4.11.5]" }, { "name":"BN406_02674 pip3; proline iminopeptidase\tK01259 pip; proline iminopeptidase [EC:3.4.11.5]" }, { "name":"BN406_02175 aatA; Aspartate aminotransferase A\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_03087 aatB; Aspartate aminotransferase B\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_03964 aatB; Aspartate aminotransferase B\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_01195 D-amino-acid transaminase\tK00824 dat; D-alanine transaminase [EC:2.6.1.21]" }, { "name":"BN406_05037 D-amino-acid transaminase\tK00824 dat; D-alanine transaminase [EC:2.6.1.21]" }, { "name":"BN406_06396 putative protein PA1255\tK22548 lhpL; trans-L-3-hydroxyproline dehydratase [EC:4.2.1.77]" }, { "name":"BN406_06397 hypothetical protein\tK09123 lhpI; cis-L-3-hydroxyproline dehydratase [EC:4.2.1.171]" } ] }, { "name":"00340 Histidine metabolism [PATH:smi00340]", "children":[ { "name":"BN406_00445 hisG; ATP phosphoribosyltransferase catalytic subunit\tK00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]" }, { "name":"BN406_00444 hisZ; ATP phosphoribosyltransferase regulatory subunit\tK02502 hisZ; ATP phosphoribosyltransferase regulatory subunit" }, { "name":"BN406_03184 hisE; phosphoribosyl-ATP pyrophosphatase\tK01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]" }, { "name":"BN406_01151 hisI; phosphoribosyl-AMP cyclohydrolase\tK01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]" }, { "name":"BN406_03186 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase\tK01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]" }, { "name":"BN406_03187 hisH; Imidazole glycerol phosphate synthase subunit HisH\tK02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]" }, { "name":"BN406_03185 hisF; Imidazole glycerol phosphate synthase subunit HisF\tK02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]" }, { "name":"BN406_03189 hisB; imidazoleglycerol-phosphate dehydratase\tK01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]" }, { "name":"BN406_00708 histidinol-phosphate aminotransferase\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_02520 hisC1; Histidinol-phosphate aminotransferase 1\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_03069 hisC2; Histidinol-phosphate aminotransferase 2\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_03628 hisC3; Histidinol-phosphate aminotransferase 3\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_02681 IMPL2; Bifunctional phosphatase IMPL2, chloroplastic\tK05602 hisN; histidinol-phosphatase [EC:3.1.3.15]" }, { "name":"BN406_03887 histidinol-phosphate phosphatase\tK05602 hisN; histidinol-phosphatase [EC:3.1.3.15]" }, { "name":"BN406_00228 hisD1; Histidinol dehydrogenase 1\tK00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]" }, { "name":"BN406_03634 hisD2; Histidinol dehydrogenase 2\tK00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]" }, { "name":"BN406_02560 hutH; Histidine ammonia-lyase\tK01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]" }, { "name":"BN406_03581 Histidine ammonia-lyase\tK01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]" }, { "name":"BN406_05826 hutH; Histidine ammonia-lyase\tK01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]" }, { "name":"BN406_05828 hutU; urocanate hydratase\tK01712 hutU; urocanate hydratase [EC:4.2.1.49]" }, { "name":"BN406_05825 hutI; Imidazolonepropionase\tK01468 hutI; imidazolonepropionase [EC:3.5.2.7]" }, { "name":"BN406_02556 N-formimino-L-glutamate deiminase\tK05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]" }, { "name":"BN406_05827 N-formylglutamate amidohydrolase\tK01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]" }, { "name":"BN406_02352 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03510 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03712 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_04757 aldA; Aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_05853 aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_00427 gsh1; glutamate--cysteine ligase precursor protein\tK01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2]" } ] }, { "name":"00350 Tyrosine metabolism [PATH:smi00350]", "children":[ { "name":"BN406_02175 aatA; Aspartate aminotransferase A\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_03087 aatB; Aspartate aminotransferase B\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_03964 aatB; Aspartate aminotransferase B\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_00708 histidinol-phosphate aminotransferase\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_02520 hisC1; Histidinol-phosphate aminotransferase 1\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_03069 hisC2; Histidinol-phosphate aminotransferase 2\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_03628 hisC3; Histidinol-phosphate aminotransferase 3\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_03438 tatA3; Tyrosine aminotransferase\tK00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]" }, { "name":"BN406_02799 vllY; Hemolysin VllY\tK00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]" }, { "name":"BN406_02796 hmgA; homogentisate 1,2-dioxygenase\tK00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]" }, { "name":"BN406_02794 maiA; Maleylacetoacetate isomerase\tK01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]" }, { "name":"BN406_02795 aromatic amino acid degradation protein\tK16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]" }, { "name":"BN406_01125 adhI; Alcohol dehydrogenase class-3\tK00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase \/ alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]" }, { "name":"BN406_06487 adhI; Alcohol dehydrogenase class-3\tK00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase \/ alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]" }, { "name":"BN406_00627 probabable alcohol dehydrogenase\tK13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]" }, { "name":"BN406_04098 adhA1; Alcohol dehydrogenase\tK13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]" }, { "name":"BN406_04429 adhA3; Alcohol dehydrogenase\tK13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]" }, { "name":"BN406_03151 hydroxyacid aldolase\tK02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]" }, { "name":"BN406_03150 gabD; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_04033 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_04224 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_04759 gabD5; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_04937 gabD7; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_05807 gabD1; putative succinate-semialdehyde dehydrogenase [NADP(+)]\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_06294 aldehyde dehydrogenase\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_06688 gabD; putative succinate-semialdehyde dehydrogenase [NADP(+)]\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_03726 xylB; Aryl-alcohol dehydrogenase\tK00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]" }, { "name":"BN406_01639 hypothetical protein\tK16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]" } ] }, { "name":"00360 Phenylalanine metabolism [PATH:smi00360]", "children":[ { "name":"BN406_05148 paaA; phenylacetate-CoA oxygenase subunit PaaA\tK02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]" }, { "name":"BN406_05149 paaB; phenylacetate-CoA oxygenase subunit PaaB\tK02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB" }, { "name":"BN406_05150 paaC; phenylacetic acid degradation protein\tK02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]" }, { "name":"BN406_05151 paaD; phenylacetic acid degradation protein\tK02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD" }, { "name":"BN406_05152 paaE; 1,2-phenylacetyl-CoA epoxidase, subunit E\tK02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE" }, { "name":"BN406_05155 paaG; 1,2-epoxyphenylacetyl-CoA isomerase\tK15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]" }, { "name":"BN406_05153 paaZ; Bifunctional protein PaaZ\tK02618 paaZ; oxepin-CoA hydrolase \/ 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]" }, { "name":"BN406_03498 fadB1; putative enoyl-CoA hydratase\tK01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]" }, { "name":"BN406_02503 hbdA; 3-hydroxybutyryl-CoA dehydrogenase\tK00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]" }, { "name":"BN406_02175 aatA; Aspartate aminotransferase A\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_03087 aatB; Aspartate aminotransferase B\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_03964 aatB; Aspartate aminotransferase B\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_00708 histidinol-phosphate aminotransferase\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_02520 hisC1; Histidinol-phosphate aminotransferase 1\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_03069 hisC2; Histidinol-phosphate aminotransferase 2\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_03628 hisC3; Histidinol-phosphate aminotransferase 3\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_03438 tatA3; Tyrosine aminotransferase\tK00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]" }, { "name":"BN406_03726 xylB; Aryl-alcohol dehydrogenase\tK00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]" }, { "name":"BN406_02799 vllY; Hemolysin VllY\tK00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]" }, { "name":"BN406_06683 dadA1; D-amino acid dehydrogenase small subunit\tK00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]" }, { "name":"BN406_06697 dadA3; D-amino acid dehydrogenase small subunit\tK00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]" }, { "name":"BN406_01195 D-amino-acid transaminase\tK00824 dat; D-alanine transaminase [EC:2.6.1.21]" }, { "name":"BN406_05037 D-amino-acid transaminase\tK00824 dat; D-alanine transaminase [EC:2.6.1.21]" }, { "name":"BN406_03513 katB; KatB catalase\/peroxidase\tK03782 katG; catalase-peroxidase [EC:1.11.1.21]" }, { "name":"BN406_03520 Amidase\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_04031 6-aminohexanoate-cyclic-dimer hydrolase\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_04489 amidase\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_06699 hypothetical protein\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_06704 hypothetical protein\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_02375 dioxygenase ferredoxin protein\tK05710 hcaC; 3-phenylpropionate\/trans-cinnamate dioxygenase ferredoxin component" }, { "name":"BN406_06059 mocE; ferredoxin\tK05710 hcaC; 3-phenylpropionate\/trans-cinnamate dioxygenase ferredoxin component" }, { "name":"BN406_00447 oxidoreductase\tK00529 hcaD; 3-phenylpropionate\/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]" }, { "name":"BN406_02372 ferredoxin reductase\tK00529 hcaD; 3-phenylpropionate\/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]" }, { "name":"BN406_02376 ferredoxin--NAD(+) reductase\tK00529 hcaD; 3-phenylpropionate\/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]" }, { "name":"BN406_06058 andAa; Anthranilate 1,2-dioxygenase system ferredoxin--NAD(+) reductase component\tK00529 hcaD; 3-phenylpropionate\/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]" } ] }, { "name":"00380 Tryptophan metabolism [PATH:smi00380]", "children":[ { "name":"BN406_02908 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex\tK00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]" }, { "name":"BN406_05114 dihydrolipoyllysine-residue succinyltransferase\tK00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]" }, { "name":"BN406_01183 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02792 lpdV; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02904 LPD2; Dihydrolipoyl dehydrogenase 2, mitochondrial\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_06654 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_05811 putative glutaryl-CoA dehydrogenase, mitochondrial\tK00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]" }, { "name":"BN406_03498 fadB1; putative enoyl-CoA hydratase\tK01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]" }, { "name":"BN406_00165 fadB; putative fatty oxidation complex alpha subunit\tK01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase \/ enoyl-CoA hydratase \/ 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]" }, { "name":"BN406_00166 fadA; Putative acyltransferase Rv0859\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_00541 vraB; Putative acetyl-CoA C-acetyltransferase vraB\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_01442 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_03063 phbA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_04528 thlA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_02352 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03510 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03712 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_04757 aldA; Aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_05853 aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_01929 nthA; nitrile hydratase subunit alpha protein\tK01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]" }, { "name":"BN406_01927 nthB; nitrile hydratase subunit beta protein\tK20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]" }, { "name":"BN406_03520 Amidase\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_04031 6-aminohexanoate-cyclic-dimer hydrolase\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_04489 amidase\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_06699 hypothetical protein\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_06704 hypothetical protein\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_00421 katA; Catalase A\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"BN406_05126 katE; Catalase C\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"BN406_03513 katB; KatB catalase\/peroxidase\tK03782 katG; catalase-peroxidase [EC:1.11.1.21]" } ] }, { "name":"00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:smi00400]", "children":[ { "name":"BN406_01587 aroF; DAHP synthetase prtein\tK01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]" }, { "name":"BN406_02534 aroB; 3-dehydroquinate synthase\tK01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]" }, { "name":"BN406_01054 aroQ; 3-dehydroquinate dehydratase\tK03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]" }, { "name":"BN406_06707 unnamed protein product\tK03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]" }, { "name":"BN406_05213 4-hydroxyphenylpyruvate dioxygenase\tK26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118]" }, { "name":"BN406_05097 aroE; Shikimate dehydrogenase\tK25901 qsuD; quinate\/shikimate dehydrogenase (NAD+) [EC:1.1.1.24]" }, { "name":"BN406_03139 aroE; Shikimate dehydrogenase\tK00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]" }, { "name":"BN406_02535 aroK; Shikimate kinase\tK00891 aroK; shikimate kinase [EC:2.7.1.71]" }, { "name":"BN406_03384 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase\tK00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]" }, { "name":"BN406_00556 aroC; chorismate synthase\tK01736 aroC; chorismate synthase [EC:4.2.3.5]" }, { "name":"BN406_02235 trpE(G); Anthranilate synthase\tK13503 trpEG; anthranilate synthase [EC:4.1.3.27]" }, { "name":"BN406_01412 trpD; Anthranilate phosphoribosyltransferase\tK00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]" }, { "name":"BN406_03162 trpF; N-(5'-phosphoribosyl)anthranilate isomerase\tK01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]" }, { "name":"BN406_01413 trpC; indole-3-glycerol-phosphate synthase\tK01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]" }, { "name":"BN406_03164 trpA; tryptophan synthase subunit alpha\tK01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]" }, { "name":"BN406_03163 trpB; Tryptophan synthase beta chain\tK01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]" }, { "name":"BN406_03042 pheAa; chorismate mutase\tK04092 tyrA1; chorismate mutase [EC:5.4.99.5]" }, { "name":"BN406_02519 tyrC; Protein tyrC\tK00220 tyrC; cyclohexadieny\/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]" }, { "name":"BN406_03355 pheA; prephenate dehydratase\tK04518 pheA2; prephenate dehydratase [EC:4.2.1.51]" }, { "name":"BN406_02175 aatA; Aspartate aminotransferase A\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_03087 aatB; Aspartate aminotransferase B\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_03964 aatB; Aspartate aminotransferase B\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_00708 histidinol-phosphate aminotransferase\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_02520 hisC1; Histidinol-phosphate aminotransferase 1\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_03069 hisC2; Histidinol-phosphate aminotransferase 2\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_03628 hisC3; Histidinol-phosphate aminotransferase 3\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_03438 tatA3; Tyrosine aminotransferase\tK00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]" } ] } ] }, { "name":"09106 Metabolism of other amino acids", "children":[ { "name":"00410 beta-Alanine metabolism [PATH:smi00410]", "children":[ { "name":"BN406_05806 puuE; 4-aminobutyrate aminotransferase PuuE\tK00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]" }, { "name":"BN406_02352 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03510 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03712 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_04757 aldA; Aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_05853 aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_02092 prr; Gamma-aminobutyraldehyde dehydrogenase\tK00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]" }, { "name":"BN406_01985 panC; pantoate--beta-alanine ligase\tK01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]" }, { "name":"BN406_02296 oxidoreductase\tK17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]" }, { "name":"BN406_02297 dihydropyrimidine dehydrogenase\tK17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]" }, { "name":"BN406_02303 dht; D-hydantoinase\/dihydropyrimidinase\tK01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]" }, { "name":"BN406_02302 allantoate amidohydrolase\tK06016 pydC; beta-ureidopropionase \/ N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]" }, { "name":"BN406_03705 aminohydrolase\tK06016 pydC; beta-ureidopropionase \/ N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]" }, { "name":"BN406_04912 atcC; N-carbamyl-L-cysteine amidohydrolase\tK06016 pydC; beta-ureidopropionase \/ N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]" }, { "name":"BN406_02253 Omega-amino acid--pyruvate aminotransferase\tK00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]" }, { "name":"BN406_03089 Omega-amino acid--pyruvate aminotransferase\tK00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]" }, { "name":"BN406_03498 fadB1; putative enoyl-CoA hydratase\tK01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]" }, { "name":"BN406_00165 fadB; putative fatty oxidation complex alpha subunit\tK01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase \/ enoyl-CoA hydratase \/ 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]" }, { "name":"BN406_05000 hypothetical protein\tK01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]" }, { "name":"BN406_00351 mmsA; Methylmalonate-semialdehyde dehydrogenase [acylating]\tK00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) \/ methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]" }, { "name":"BN406_02439 aminotransferase\tK29020 E5.1.1.15; 2-aminohexano-6-lactam racemase [EC:5.1.1.15]" } ] }, { "name":"00430 Taurine and hypotaurine metabolism [PATH:smi00430]", "children":[ { "name":"BN406_03773 putative acylase\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]" }, { "name":"BN406_05209 ggt; Gamma-glutamyltranspeptidase\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]" }, { "name":"BN406_01362 ald; Alanine dehydrogenase\tK00259 ald; alanine dehydrogenase [EC:1.4.1.1]" }, { "name":"BN406_03115 hypothetical protein\tK15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]" }, { "name":"BN406_05696 hypothetical protein\tK07255 tauX; taurine dehydrogenase small subunit [EC:1.4.2.-]" }, { "name":"BN406_05695 FAD dependent oxidoreductase\tK07256 tauY; taurine dehydrogenase large subunit [EC:1.4.2.-]" }, { "name":"BN406_04906 xsc; putative sulfoacetaldehyde acetyltransferase\tK03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15]" }, { "name":"BN406_05694 xsc; putative sulfoacetaldehyde acetyltransferase\tK03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15]" }, { "name":"BN406_04093 pta1; Phosphate acetyltransferase\tK00625 pta; phosphate acetyltransferase [EC:2.3.1.8]" }, { "name":"BN406_04904 pta3; Phosphate acetyltransferase\tK00625 pta; phosphate acetyltransferase [EC:2.3.1.8]" }, { "name":"BN406_05692 pta; Phosphate acetyltransferase\tK00625 pta; phosphate acetyltransferase [EC:2.3.1.8]" }, { "name":"BN406_06802 malic enzyme\tK00625 pta; phosphate acetyltransferase [EC:2.3.1.8]" }, { "name":"BN406_04094 ackA; Acetate kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]" }, { "name":"BN406_05808 ackA; Acetate kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]" } ] }, { "name":"00440 Phosphonate and phosphinate metabolism [PATH:smi00440]", "children":[ { "name":"BN406_05685 phosphonoacetaldehyde dehydrogenase\tK00206 phnY; phosphonoacetaldehyde dehydrogenase [EC:1.2.1.-]" }, { "name":"BN406_05686 phnA; phosphonoacetate hydrolase\tK19670 phnA; phosphonoacetate hydrolase [EC:3.11.1.2]" }, { "name":"BN406_05687 phnW; 2-aminoethylphosphonate--pyruvate transaminase\tK03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]" }, { "name":"BN406_05245 phnI; carbon-phosphorus lyase\tK06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]" }, { "name":"BN406_05247 phnG; carbon-phosphorus lyase\tK06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]" }, { "name":"BN406_05246 phnH; carbon-phosphorus lyase\tK06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]" }, { "name":"BN406_05242 phnL; Phosphonates transport ATP-binding protein PhnL\tK05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]" }, { "name":"BN406_05820 phnM; Protein phnM\tK06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]" }, { "name":"BN406_05244 phnJ; carbon-phosphorus lyase\tK06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]" }, { "name":"BN406_01335 hypothetical protein\tK06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]" } ] }, { "name":"00450 Selenocompound metabolism [PATH:smi00450]", "children":[ { "name":"BN406_03211 metB; Cystathionine gamma-synthase\tK01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]" }, { "name":"BN406_01211 metC; Putative cystathionine beta-lyase\tK01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]" }, { "name":"BN406_04118 metC; Putative cystathionine beta-lyase\tK01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]" }, { "name":"BN406_01701 methionine synthase I\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"BN406_01716 methyltetrahydrofolate:corrinoid\/iron-sulfur protein methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"BN406_02836 metH; Methionine synthase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"BN406_02102 mdeA; methionine gamma-lyase\tK01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]" }, { "name":"BN406_01474 csd; putative cysteine desulfurase\tK11717 sufS; cysteine desulfurase \/ selenocysteine lyase [EC:2.8.1.7 4.4.1.16]" }, { "name":"BN406_01300 trxB; Thioredoxin reductase\tK00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]" }, { "name":"BN406_04803 trxB; Thioredoxin reductase\tK00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]" }, { "name":"BN406_04266 nodQ; Bifunctional enzyme NodQ\tK00955 cysNC; bifunctional enzyme CysN\/CysC [EC:2.7.7.4 2.7.1.25]" }, { "name":"BN406_05924 nodQ; Bifunctional enzyme NodQ\tK00955 cysNC; bifunctional enzyme CysN\/CysC [EC:2.7.7.4 2.7.1.25]" }, { "name":"BN406_00598 cysN; Sulfate adenylyltransferase subunit 1\tK00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]" }, { "name":"BN406_00599 cysD; Sulfate adenylyltransferase subunit 2\tK00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]" }, { "name":"BN406_04265 nodP; Sulfate adenylyltransferase subunit 2\tK00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]" }, { "name":"BN406_05925 nodP; Sulfate adenylyltransferase subunit 2\tK00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]" }, { "name":"BN406_05068 selD; selenophosphate synthetase\tK01008 selD; selenide, water dikinase [EC:2.7.9.3]" }, { "name":"BN406_05082 selA; L-seryl-tRNA(Sec) selenium transferase\tK01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]" }, { "name":"BN406_01337 metG; Methionine--tRNA ligase\tK01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]" } ] }, { "name":"00460 Cyanoamino acid metabolism [PATH:smi00460]", "children":[ { "name":"BN406_02747 beta-glucosidase\tK05350 bglB; beta-glucosidase [EC:3.2.1.21]" }, { "name":"BN406_03773 putative acylase\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]" }, { "name":"BN406_05209 ggt; Gamma-glutamyltranspeptidase\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]" }, { "name":"BN406_00943 glyA1; Serine hydroxymethyltransferase 1\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" } ] }, { "name":"00470 D-Amino acid metabolism [PATH:smi00470]", "children":[ { "name":"BN406_00863 alr; Alanine racemase\tK01775 alr; alanine racemase [EC:5.1.1.1]" }, { "name":"BN406_06684 dadX; Alanine racemase, catabolic\tK01775 alr; alanine racemase [EC:5.1.1.1]" }, { "name":"BN406_01195 D-amino-acid transaminase\tK00824 dat; D-alanine transaminase [EC:2.6.1.21]" }, { "name":"BN406_05037 D-amino-acid transaminase\tK00824 dat; D-alanine transaminase [EC:2.6.1.21]" }, { "name":"BN406_01994 ddl; D-alanine--D-alanine ligase\tK01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]" }, { "name":"BN406_01519 glsA; glutaminase\tK01425 glsA; glutaminase [EC:3.5.1.2]" }, { "name":"BN406_01507 purQ; phosphoribosylformylglycinamidine synthase I\tK23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ \/ glutaminase [EC:6.3.5.3 3.5.1.2]" }, { "name":"BN406_01522 murI; glutamate racemase\tK01776 murI; glutamate racemase [EC:5.1.1.3]" }, { "name":"BN406_02001 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase\tK01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]" }, { "name":"BN406_06782 hypothetical protein\tK22210 DGLUCY; D-glutamate cyclase [EC:4.2.1.48]" }, { "name":"BN406_01567 ycjG; L-Ala-D\/L-Glu epimerase\tK19802 ycjG; L-Ala-D\/L-Glu epimerase \/ N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]" }, { "name":"BN406_01902 aspartate racemase\tK01779 racD; aspartate racemase [EC:5.1.1.13]" }, { "name":"BN406_03040 dapF; diaminopimelate epimerase\tK01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]" }, { "name":"BN406_02507 lysA; Diaminopimelate decarboxylase\tK01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]" }, { "name":"BN406_06110 decarboxylase\tK01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]" }, { "name":"BN406_05813 FAD dependent oxidoreductase\tK19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6]" }, { "name":"BN406_06398 4-hydroxyproline epimerase\tK12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]" }, { "name":"BN406_06407 dihydrodipicolinate synthase\tK21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]" }, { "name":"BN406_06404 aldH; NADP-dependent fatty aldehyde dehydrogenase\tK13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]" }, { "name":"BN406_06683 dadA1; D-amino acid dehydrogenase small subunit\tK00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]" }, { "name":"BN406_06697 dadA3; D-amino acid dehydrogenase small subunit\tK00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]" } ] }, { "name":"00480 Glutathione metabolism [PATH:smi00480]", "children":[ { "name":"BN406_03773 putative acylase\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]" }, { "name":"BN406_05209 ggt; Gamma-glutamyltranspeptidase\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]" }, { "name":"BN406_02517 chaC; cation transport protein\tK07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]" }, { "name":"BN406_05110 OPLAH; 5-oxoprolinase\tK01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]" }, { "name":"BN406_06791 UPF0271 protein\tK07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]" }, { "name":"BN406_00427 gsh1; glutamate--cysteine ligase precursor protein\tK01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2]" }, { "name":"BN406_03469 gshB; Glutathione synthetase\tK01920 gshB; glutathione synthase [EC:6.3.2.3]" }, { "name":"BN406_05639 gshB2; glutathione synthetase\tK01920 gshB; glutathione synthase [EC:6.3.2.3]" }, { "name":"BN406_00890 pepA; putative cytosol aminopeptidase\tK01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]" }, { "name":"BN406_03282 peptidase M17 leucyl aminopeptidase domain-containing protein\tK01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]" }, { "name":"BN406_00684 pepN; aminopeptidase N\tK01256 pepN; aminopeptidase N [EC:3.4.11.2]" }, { "name":"BN406_00612 gst1; glutathione S-transferase\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_00615 glutathione S-transferase\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_00909 hypothetical protein\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_01879 gst10; glutathione S-transferase\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_01949 gst6; glutathione S-transferase\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_03066 gst8; glutathione S-transferase\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_03245 gst9; glutathione S-transferase\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_03434 gst3; glutathione S-transferase\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_03458 gst4; glutathione S-transferase\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_03542 gst14; gst14 glutatione S-transferase\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_04066 glutathione S-transferase domain protein\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_04552 gst12; Gst12 glutathione-S-transferase\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_05128 gstA; Protein gstA\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_05415 gst12; probabable glutathione S-transferase protein\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_06253 glutathione S-transferase domain-containing protein\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_01588 gor; Glutathione reductase\tK00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]" }, { "name":"BN406_01525 icd; Isocitrate dehydrogenase [NADP]\tK00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]" }, { "name":"BN406_01660 yqjI; 6-phosphogluconate dehydrogenase, decarboxylating 2\tK00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]" }, { "name":"BN406_00319 zwf; glucose-6-phosphate 1-dehydrogenase\tK00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]" }, { "name":"BN406_00570 peroxiredoxin protein\tK24138 prx3; glutaredoxin\/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]" }, { "name":"BN406_02731 ornithine, DAP, or arginine decarboxylase\tK01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]" }, { "name":"BN406_04153 speF; Ornithine decarboxylase\tK01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]" } ] } ] }, { "name":"09107 Glycan biosynthesis and metabolism", "children":[ { "name":"00520 Amino sugar and nucleotide sugar metabolism [PATH:smi00520]", "children":[ { "name":"BN406_01480 anmK; anhydro-N-acetylmuramic acid kinase\tK09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]" }, { "name":"BN406_03171 hypothetical protein\tK07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]" }, { "name":"BN406_03170 nucleotidyl transferase\tK00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]" }, { "name":"BN406_03329 murQ; N-acetylmuramic acid-6-phosphate etherase\tK07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]" }, { "name":"BN406_01409 glmU; Bifunctional protein GlmU\tK04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase \/ glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]" }, { "name":"BN406_00226 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase\tK00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]" }, { "name":"BN406_01997 murB; UDP-N-acetylenolpyruvoylglucosamine reductase\tK00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]" }, { "name":"BN406_01256 hydrolase glycosidase\tK01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]" }, { "name":"BN406_05831 hexA; beta-N-acetylhexosaminidase\tK12373 HEXA_B; hexosaminidase [EC:3.2.1.52]" }, { "name":"BN406_03333 nagA; N-acetylglucosamine-6-phosphate deacetylase\tK01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]" }, { "name":"BN406_03330 hypothetical protein\tK18676 gspK; glucosamine kinase [EC:2.7.1.8]" }, { "name":"BN406_02591 glmM; Phosphoglucosamine mutase\tK03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]" }, { "name":"BN406_01408 glmS; Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]" }, { "name":"BN406_03332 hypothetical protein\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]" }, { "name":"BN406_04280 glmS; Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]" }, { "name":"BN406_00130 frk; Fructokinase\tK00847 E2.7.1.4; fructokinase [EC:2.7.1.4]" }, { "name":"BN406_02839 mak; Fructokinase\tK00847 E2.7.1.4; fructokinase [EC:2.7.1.4]" }, { "name":"BN406_00131 pgi; glucose-6-phosphate isomerase\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]" }, { "name":"BN406_02402 pgiA1; Putative glucose-6-phosphate isomerase 1\tK06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]" }, { "name":"BN406_05522 pgiA2; Putative glucose-6-phosphate isomerase 2\tK06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]" }, { "name":"BN406_02837 pmi; Mannose-6-phosphate isomerase\tK28465 pmi; mannose-6-phosphate isomerase [EC:5.3.1.8]" }, { "name":"BN406_05619 abfA; alpha-L-arabinofuranosidase\tK01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]" }, { "name":"BN406_06219 exoB3; UDP-glucose 4-epimerase\tK12448 UXE; UDP-arabinose 4-epimerase [EC:5.1.3.5]" }, { "name":"BN406_01646 BETA-xylosidase\tK01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]" }, { "name":"BN406_06220 uxs1; UDP-glucuronic acid decarboxylase 1\tK08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]" }, { "name":"BN406_06427 uxs1; UDP-glucuronic acid decarboxylase 1\tK08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]" }, { "name":"BN406_00818 lspL; UDP-glucuronate 5'-epimerase\tK08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]" }, { "name":"BN406_03292 glk; glucokinase\tK00845 glk; glucokinase [EC:2.7.1.2]" }, { "name":"BN406_02703 pgm; Phosphoglucomutase\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"BN406_02665 exoN; UTP--glucose-1-phosphate uridylyltransferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]" }, { "name":"BN406_05584 exoN; UTP--glucose-1-phosphate uridylyltransferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]" }, { "name":"BN406_00817 rkpK; UDP-glucose 6-dehydrogenase\tK00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]" }, { "name":"BN406_02602 SQD1; UDP-sulfoquinovose synthase, chloroplastic\tK06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]" }, { "name":"BN406_00190 exoB; UDP-glucose 4-epimerase\tK01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]" }, { "name":"BN406_05602 exoB1; UDP-glucose 4-epimerase\tK01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]" }, { "name":"BN406_06097 UDP-galactopyranose mutase\tK01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]" }, { "name":"BN406_03175 IIA component of PTS system protein\tK02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]" }, { "name":"BN406_05437 rfbF; Glucose-1-phosphate cytidylyltransferase\tK00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]" }, { "name":"BN406_02701 glgC; Glucose-1-phosphate adenylyltransferase\tK00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]" }, { "name":"BN406_05760 rmlA1; Glucose-1-phosphate thymidylyltransferase\tK00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]" }, { "name":"BN406_06071 rmlA3; Glucose-1-phosphate thymidylyltransferase\tK00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]" } ] }, { "name":"00541 Biosynthesis of various nucleotide sugars [PATH:smi00541]", "children":[ { "name":"BN406_01409 glmU; Bifunctional protein GlmU\tK04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase \/ glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]" }, { "name":"BN406_05894 nucleotide sugar dehydrogenase\tK13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]" }, { "name":"BN406_06056 rkpL; RkpL, polysaccharide biosynthesis protein UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase\tK15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.115]" }, { "name":"BN406_06054 rkpN; RkpN, acylneuraminate cytidylyltransferase\tK15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]" }, { "name":"BN406_00207 putative phosphosugar isomerase aq_1546\tK06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]" }, { "name":"BN406_06123 putative phosphosugar isomerase aq_1546\tK06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]" }, { "name":"BN406_01174 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase\tK01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]" }, { "name":"BN406_03354 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase\tK00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]" }, { "name":"BN406_06366 nanA; N-acetylneuraminate lyase\tK01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]" }, { "name":"BN406_02665 exoN; UTP--glucose-1-phosphate uridylyltransferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]" }, { "name":"BN406_05584 exoN; UTP--glucose-1-phosphate uridylyltransferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]" }, { "name":"BN406_00817 rkpK; UDP-glucose 6-dehydrogenase\tK00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]" }, { "name":"BN406_05437 rfbF; Glucose-1-phosphate cytidylyltransferase\tK00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]" }, { "name":"BN406_05436 ddhB; putative CDP-glucose 4,6-dehydratase protein\tK01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]" }, { "name":"BN406_06422 tyv; CDP-tyvelose-2-epimerase\tK12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]" }, { "name":"BN406_05760 rmlA1; Glucose-1-phosphate thymidylyltransferase\tK00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]" }, { "name":"BN406_06071 rmlA3; Glucose-1-phosphate thymidylyltransferase\tK00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]" }, { "name":"BN406_05758 rfbB; dTDP-glucose 4,6-dehydratase\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"BN406_06073 rffG; dTDP-glucose 4,6-dehydratase 2\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"BN406_05431 dTDP-4-dehydrorhamnose 3,5-epimerase\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]" }, { "name":"BN406_05759 dTDP-4-dehydrorhamnose 3,5-epimerase\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]" }, { "name":"BN406_06072 dTDP-4-dehydrorhamnose 3,5-epimerase\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]" }, { "name":"BN406_05757 putative dTDP-4-dehydrorhamnose reductase\tK00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]" }, { "name":"BN406_06074 putative dTDP-4-dehydrorhamnose reductase\tK00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]" } ] }, { "name":"00510 N-Glycan biosynthesis" }, { "name":"00513 Various types of N-glycan biosynthesis" }, { "name":"00512 Mucin type O-glycan biosynthesis" }, { "name":"00515 Mannose type O-glycan biosynthesis" }, { "name":"00514 Other types of O-glycan biosynthesis" }, { "name":"00532 Glycosaminoglycan biosynthesis - chondroitin sulfate \/ dermatan sulfate" }, { "name":"00534 Glycosaminoglycan biosynthesis - heparan sulfate \/ heparin" }, { "name":"00533 Glycosaminoglycan biosynthesis - keratan sulfate" }, { "name":"00531 Glycosaminoglycan degradation" }, { "name":"00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis" }, { "name":"00601 Glycosphingolipid biosynthesis - lacto and neolacto series" }, { "name":"00603 Glycosphingolipid biosynthesis - globo and isoglobo series" }, { "name":"00604 Glycosphingolipid biosynthesis - ganglio series" }, { "name":"00511 Other glycan degradation [PATH:smi00511]", "children":[ { "name":"BN406_05132 lacZ; Beta-galactosidase\tK01190 lacZ; beta-galactosidase [EC:3.2.1.23]" }, { "name":"BN406_05831 hexA; beta-N-acetylhexosaminidase\tK12373 HEXA_B; hexosaminidase [EC:3.2.1.52]" }, { "name":"BN406_01653 bmnA; putative BETA-mannosidase protein\tK01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]" } ] }, { "name":"00540 Lipopolysaccharide biosynthesis [PATH:smi00540]", "children":[ { "name":"BN406_01237 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase\tK00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]" }, { "name":"BN406_01990 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase\tK02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]" }, { "name":"BN406_01235 lpxD; UDP-3-O-acylglucosamine N-acyltransferase\tK02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]" }, { "name":"BN406_01238 hypothetical protein\tK09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]" }, { "name":"BN406_01239 lpxB; lipid-A-disaccharide synthase\tK00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]" }, { "name":"BN406_00468 lpxK; tetraacyldisaccharide 4'-kinase\tK00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]" }, { "name":"BN406_00466 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase\tK02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]" }, { "name":"BN406_01666 msbB; lipid A biosynthesis lauroyl acyltransferase\tK02517 lpxL; Kdo2-lipid IVA lauroyltransferase\/acyltransferase [EC:2.3.1.241 2.3.1.-]" }, { "name":"BN406_05782 hypothetical protein\tK03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]" }, { "name":"BN406_01510 hypothetical protein\tK12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]" } ] }, { "name":"00542 O-Antigen repeat unit biosynthesis" }, { "name":"00550 Peptidoglycan biosynthesis [PATH:smi00550]", "children":[ { "name":"BN406_00226 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase\tK00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]" }, { "name":"BN406_01997 murB; UDP-N-acetylenolpyruvoylglucosamine reductase\tK00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]" }, { "name":"BN406_01998 murC; UDP-N-acetylmuramate--L-alanine ligase\tK01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]" }, { "name":"BN406_02001 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase\tK01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]" }, { "name":"BN406_02004 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase\tK01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]" }, { "name":"BN406_01994 ddl; D-alanine--D-alanine ligase\tK01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]" }, { "name":"BN406_02003 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate\/D-alanyl-D-alanyl ligase\tK01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]" }, { "name":"BN406_01231 uppS; UDP pyrophosphate synthase\tK00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]" }, { "name":"BN406_03459 uppP; UDP pyrophosphate phosphatase\tK06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]" }, { "name":"BN406_02002 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase\tK01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]" }, { "name":"BN406_01999 murG; UDPdiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase\tK02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]" }, { "name":"BN406_03067 mtgA; Monofunctional biosynthetic peptidoglycan transglycosylase\tK03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"BN406_00667 penicillin-binding protein 1A family\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"BN406_01060 mrcA; Penicillin-binding protein 1A\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"BN406_03311 penicillin-binding protein\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"BN406_03552 mrcA; Penicillin-binding protein 1A\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"BN406_04813 mrcB; MrcB penicillin binding protein B\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"BN406_05857 pbpC; bifunctional penicillin-binding protein\tK05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]" }, { "name":"BN406_02000 ftsW; cell division protein FtsW\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"BN406_02005 ftsI; penicillin-binding transmembrane protein\tK03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]" }, { "name":"BN406_03551 peptidoglycan glycosyltransferase\tK03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]" }, { "name":"BN406_00548 hypothetical protein\tK07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5\/6) [EC:3.4.16.4]" }, { "name":"BN406_01143 serine-type D-Ala-D-Ala carboxypeptidase\tK07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5\/6) [EC:3.4.16.4]" }, { "name":"BN406_01340 dac; penicillin-binding precursor (D-alanyl-D-alanine carboxypeptidase fraction A) transmembrane protein\tK07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5\/6) [EC:3.4.16.4]" } ] }, { "name":"00552 Teichoic acid biosynthesis [PATH:smi00552]", "children":[ { "name":"BN406_03459 uppP; UDP pyrophosphate phosphatase\tK06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]" } ] }, { "name":"00571 Lipoarabinomannan (LAM) biosynthesis" }, { "name":"00572 Arabinogalactan biosynthesis - Mycobacterium" }, { "name":"00543 Exopolysaccharide biosynthesis [PATH:smi00543]", "children":[ { "name":"BN406_02133 hypothetical protein\tK19294 algI; alginate O-acetyltransferase complex protein AlgI" }, { "name":"BN406_06017 Membrane bound O-acyl transferase\tK19294 algI; alginate O-acetyltransferase complex protein AlgI" }, { "name":"BN406_01215 cysE; Serine acetyltransferase\tK00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]" }, { "name":"BN406_05598 exoY; Exopolysaccharide production protein ExoY\tK16566 exoY; exopolysaccharide production protein ExoY" }, { "name":"BN406_06084 undecaprenyl-phosphate galactose phosphotransferase\tK16566 exoY; exopolysaccharide production protein ExoY" }, { "name":"BN406_05587 exoA; Succinoglycan biosynthesis protein exoA\tK16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]" }, { "name":"BN406_05588 exoL; glucosyltransferase\tK16558 exoL; succinoglycan biosynthesis protein ExoL [EC:2.-.-.-]" }, { "name":"BN406_05586 exoM; Succinoglycan biosynthesis protein exoM\tK16556 exoM; succinoglycan biosynthesis protein ExoM [EC:2.4.-.-]" }, { "name":"BN406_05601 exoZ; Exopolysaccharide production protein ExoZ\tK16568 exoZ; exopolysaccharide production protein ExoZ" }, { "name":"BN406_05585 exoO; Succinoglycan biosynthesis protein exoO\tK16555 exoO; succinoglycan biosynthesis protein ExoO [EC:2.4.-.-]" }, { "name":"BN406_05596 exoU; Succinoglycan biosynthesis protein exoU\tK16564 exoU; succinoglycan biosynthesis protein ExoU [EC:2.4.-.-]" }, { "name":"BN406_06804 exoU; Succinoglycan biosynthesis protein exoU\tK16564 exoU; succinoglycan biosynthesis protein ExoU [EC:2.4.-.-]" }, { "name":"BN406_05594 exoW; Succinoglycan biosynthesis protein exoW\tK16562 exoW; succinoglycan biosynthesis protein ExoW [EC:2.4.-.-]" }, { "name":"BN406_05590 exoH; succinyltransferase\tK16560 exoH; succinoglycan biosynthesis protein ExoH" }, { "name":"BN406_05595 exoV; pyruvyltransferase\tK16563 exoV; succinoglycan biosynthesis protein ExoV" } ] } ] }, { "name":"09108 Metabolism of cofactors and vitamins", "children":[ { "name":"00730 Thiamine metabolism [PATH:smi00730]", "children":[ { "name":"BN406_05181 thiC; thiamine biosynthesis protein ThiC\tK03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]" }, { "name":"BN406_05582 thiD; phoshomethylpyrimidine kinase\tK00941 thiD; hydroxymethylpyrimidine\/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]" }, { "name":"BN406_01478 nifS; pyridoxal-phosphate-dependent aminotransferase\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]" }, { "name":"BN406_05180 thiO; Putative thiamine biosynthesis oxidoreductase thiO\tK03153 thiO; glycine oxidase [EC:1.4.3.19]" }, { "name":"BN406_05502 FAD dependent oxidoreductase\tK03153 thiO; glycine oxidase [EC:1.4.3.19]" }, { "name":"BN406_00535 dxs; 1-deoxy-D-xylulose-5-phosphate synthase\tK01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]" }, { "name":"BN406_05178 thiG; thiazole synthase\tK03149 thiG; thiazole synthase [EC:2.8.1.10]" }, { "name":"BN406_02638 thiE2; thiamine-phosphate pyrophosphorylase\tK00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]" }, { "name":"BN406_05177 thiE; thiamine-phosphate pyrophosphorylase\tK00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]" }, { "name":"BN406_03051 hypothetical protein\tK00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]" }, { "name":"BN406_01108 adk; Adenylate kinase\tK00939 adk; adenylate kinase [EC:2.7.4.3]" } ] }, { "name":"00740 Riboflavin metabolism [PATH:smi00740]", "children":[ { "name":"BN406_00557 RIBBA; Riboflavin biosynthesis protein ribBA, chloroplastic\tK14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase \/ GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]" }, { "name":"BN406_00945 ribD; riboflavin biosynthesis protein\tK11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase \/ 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]" }, { "name":"BN406_06681 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase\tK02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]" }, { "name":"BN406_00950 ribH1; 6,7-dimethyl-8-ribityllumazine synthase 1\tK00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]" }, { "name":"BN406_02045 ribH2; 6,7-dimethyl-8-ribityllumazine synthase 2\tK00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]" }, { "name":"BN406_00946 ribE; riboflavin synthase subunit alpha\tK00793 ribE; riboflavin synthase [EC:2.5.1.9]" }, { "name":"BN406_00452 ribF; bifunctional riboflavin kinase\/FMN adenylyltransferase\tK11753 ribF; riboflavin kinase \/ FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]" }, { "name":"BN406_04216 hypothetical protein\tK23462 tgnA; flavin-dependent trigonelline monooxygenase, reductase component [EC:1.5.1.36]" }, { "name":"BN406_05221 NADH-dependent FMN reductase\tK00299 ssuE; FMN reductase [EC:1.5.1.38]" }, { "name":"BN406_01574 oxidoreductase NAD protein\tK04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]" }, { "name":"BN406_03997 putative aromatic acid decarboxylase\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]" }, { "name":"BN406_04422 3-octaprenyl-4-hydroxybenzoate carboxy-lyase\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]" }, { "name":"BN406_06523 putative aromatic acid decarboxylase\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]" } ] }, { "name":"00750 Vitamin B6 metabolism [PATH:smi00750]", "children":[ { "name":"BN406_00550 pdxH; Pyridoxine\/pyridoxamine 5'-phosphate oxidase\tK00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]" }, { "name":"BN406_06687 pdxH; Pyridoxine\/pyridoxamine 5'-phosphate oxidase\tK00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]" }, { "name":"BN406_03114 pdxK; pyridoxamine kinase\tK00868 pdxK; pyridoxine kinase [EC:2.7.1.35]" }, { "name":"BN406_04350 ydbC; Putative oxidoreductase YdbC\tK05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]" }, { "name":"BN406_02588 serC; phosphoserine aminotransferase\tK00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]" }, { "name":"BN406_00885 pdxA1; 4-hydroxythreonine-4-phosphate dehydrogenase 1\tK00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]" }, { "name":"BN406_05235 pdxA3; 4-hydroxythreonine-4-phosphate dehydrogenase 3\tK00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]" }, { "name":"BN406_01907 pdxJ; pyridoxine 5'-phosphate synthase\tK03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]" }, { "name":"BN406_00577 thrC; Threonine synthase\tK01733 thrC; threonine synthase [EC:4.2.3.1]" } ] }, { "name":"00760 Nicotinate and nicotinamide metabolism [PATH:smi00760]", "children":[ { "name":"BN406_00830 nadB; L-aspartate oxidase\tK00278 nadB; L-aspartate oxidase [EC:1.4.3.16]" }, { "name":"BN406_00829 nadA; quinolinate synthetase\tK03517 nadA; quinolinate synthase [EC:2.5.1.72]" }, { "name":"BN406_00831 nadC; nicotinate-nucleotide pyrophosphorylase carboxylating protein\tK00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]" }, { "name":"BN406_00215 pncB; nicotinate phosphoribosyltransferase\tK00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]" }, { "name":"BN406_03263 deoD; purine nucleoside phosphorylase\tK03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]" }, { "name":"BN406_02660 5'-nucleotidase precursor (signal peptide) protein\tK11751 ushA; 5'-nucleotidase \/ UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]" }, { "name":"BN406_01264 surE; stationary phase survival protein SurE\tK03787 surE; 5'\/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]" }, { "name":"BN406_02960 nadD; nicotinic acid mononucleotide adenylyltransferase\tK00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]" }, { "name":"BN406_01198 mazG; nucleoside triphosphate pyrophosphohydrolase\tK04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]" }, { "name":"BN406_03359 hypothetical protein\tK03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]" }, { "name":"BN406_01580 nadE; Glutamine-dependent NAD(+) synthetase\tK01916 nadE; NAD+ synthase [EC:6.3.1.5]" }, { "name":"BN406_05343 nadE; NH(3)-dependent NAD(+) synthetase\tK01916 nadE; NAD+ synthase [EC:6.3.1.5]" }, { "name":"BN406_01187 hypothetical protein\tK03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]" }, { "name":"BN406_00214 pncA; pyrazinamidase\/nicotinamidase (Includes: pyrazinamidase, nicotinamidase) protein\tK08281 pncA; nicotinamidase\/pyrazinamidase [EC:3.5.1.19 3.5.1.-]" }, { "name":"BN406_01063 ppnK; inorganic polyphosphate\/ATP-NAD kinase\tK00858 ppnK; NAD+ kinase [EC:2.7.1.23]" }, { "name":"BN406_01471 sthA; putative soluble pyridine nucleotide transhydrogenase\tK00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]" }, { "name":"BN406_02717 putative membrane protein\tK00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]" }, { "name":"BN406_02718 pntAA; NAD(P) transhydrogenase subunit alpha part 1\tK00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]" }, { "name":"BN406_06729 pntA; NAD(P) transhydrogenase subunit alpha\tK00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]" }, { "name":"BN406_02716 pntB; NAD(P) transhydrogenase subunit beta\tK00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]" }, { "name":"BN406_06730 pntB; NAD(P) transhydrogenase subunit beta\tK00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]" }, { "name":"BN406_06269 oxidoreductase subunit protein\tK18029 nicA; nicotinate dehydrogenase subunit A [EC:1.17.2.1]" }, { "name":"BN406_06268 Isoquinoline 1-oxidoreductase\tK18030 nicB; nicotinate dehydrogenase subunit B [EC:1.17.2.1]" }, { "name":"BN406_04914 Asp\/Glu\/Hydantoin racemase family protein\tK01799 nicE; maleate isomerase [EC:5.2.1.1]" }, { "name":"BN406_06243 ectoine utilization protein EutA\tK01799 nicE; maleate isomerase [EC:5.2.1.1]" }, { "name":"BN406_03150 gabD; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_04033 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_04224 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_04759 gabD5; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_04937 gabD7; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_05807 gabD1; putative succinate-semialdehyde dehydrogenase [NADP(+)]\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_06294 aldehyde dehydrogenase\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" }, { "name":"BN406_06688 gabD; putative succinate-semialdehyde dehydrogenase [NADP(+)]\tK00135 gabD; succinate-semialdehyde dehydrogenase \/ glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]" } ] }, { "name":"00770 Pantothenate and CoA biosynthesis [PATH:smi00770]", "children":[ { "name":"BN406_00202 ilvB1; hypothetical protein\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_01936 ilvI; Acetolactate synthase large subunit\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_02029 ilvG; thiamine pyrophosphate protein\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_03706 hypothetical protein\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_03874 Thiamine pyrophosphate-requiring protein\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_04001 Acetolactate synthase\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"BN406_01935 ilvH; acetolactate synthase 3 regulatory subunit\tK01653 E2.2.1.6S; acetolactate synthase I\/III small subunit [EC:2.2.1.6]" }, { "name":"BN406_01888 ilvC; ketol-acid reductoisomerase\tK00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]" }, { "name":"BN406_02684 ilvD; Dihydroxy-acid dehydratase\tK01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]" }, { "name":"BN406_01984 panB; 3-methyl-2-oxobutanoatehydroxymethyltransferase\tK00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]" }, { "name":"BN406_06057 ketopantoate hydroxymethyltransferase\tK00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]" }, { "name":"BN406_01985 panC; pantoate--beta-alanine ligase\tK01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]" }, { "name":"BN406_03183 coaA; Pantothenate kinase\tK00867 coaA; type I pantothenate kinase [EC:2.7.1.33]" }, { "name":"BN406_03490 dfp; bifunctional phosphopantothenoylcysteine decarboxylase\/phosphopantothenate synthase\tK13038 coaBC; phosphopantothenoylcysteine decarboxylase \/ phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]" }, { "name":"BN406_01198 mazG; nucleoside triphosphate pyrophosphohydrolase\tK04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]" }, { "name":"BN406_01316 coaD; phosphopantetheine adenylyltransferase\tK00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]" }, { "name":"BN406_03140 coaE; dephospho-CoA kinase\tK00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]" }, { "name":"BN406_00805 acpS; 4'-phosphopantetheinyl transferase\tK00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]" }, { "name":"BN406_00628 ilvE2; aminotransferase\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"BN406_03352 ilvE; putative branched-chain-amino-acid aminotransferase\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"BN406_02296 oxidoreductase\tK17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]" }, { "name":"BN406_02297 dihydropyrimidine dehydrogenase\tK17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]" }, { "name":"BN406_02303 dht; D-hydantoinase\/dihydropyrimidinase\tK01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]" }, { "name":"BN406_02302 allantoate amidohydrolase\tK06016 pydC; beta-ureidopropionase \/ N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]" }, { "name":"BN406_03705 aminohydrolase\tK06016 pydC; beta-ureidopropionase \/ N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]" }, { "name":"BN406_04912 atcC; N-carbamyl-L-cysteine amidohydrolase\tK06016 pydC; beta-ureidopropionase \/ N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]" }, { "name":"BN406_02352 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03510 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03712 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_04757 aldA; Aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_05853 aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" } ] }, { "name":"00780 Biotin metabolism [PATH:smi00780]", "children":[ { "name":"BN406_03378 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase 1\tK00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]" }, { "name":"BN406_00880 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"BN406_01668 3-oxoacyl-ACP synthase\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"BN406_01669 3-oxoacyl-ACP synthase\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"BN406_00878 nodG; Nodulation protein G\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_01391 putative short-chain dehydrogenase\/reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_02869 oxidoreductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03494 3-oxoacyl-ACP reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03670 Short-chain type dehydrogenase\/reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03731 short chain dehydrogenase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03760 short-chain dehydrogenase\/reductase SDR\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03856 short-chain dehydrogenase\/reductase SDR\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03879 3-ketoacyl-ACP reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_04264 nodG; Nodulation protein G\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_04355 Short-chain type dehydrogenase\/reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_06191 Short-chain type dehydrogenase\/reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_06222 3-oxoacyl-(acyl-carrier-protein) reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_06762 hypothetical protein\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_01236 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein]dehydratase\tK02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]" }, { "name":"BN406_01670 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA\/FabZ\tK02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]" }, { "name":"BN406_00553 fabI1; Enoyl-[acyl-carrier-protein] reductase [NADH] 1\tK00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]" }, { "name":"BN406_03377 fabI2; Enoyl-[acyl-carrier-protein] reductase [NADH] 2\tK00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]" }, { "name":"BN406_04095 fabI1; Enoyl-[acyl-carrier-protein] reductase [NADH] 1\tK00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]" }, { "name":"BN406_01015 birA; biotin--[acetyl-CoA-carboxylase] synthetase\tK03524 birA; BirA family transcriptional regulator, biotin operon repressor \/ biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]" } ] }, { "name":"00785 Lipoic acid metabolism [PATH:smi00785]", "children":[ { "name":"BN406_01127 lipB; lipoate-protein ligase B\tK03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]" }, { "name":"BN406_01185 lipA; Lipoyl synthase\tK03644 lipA; lipoyl synthase [EC:2.8.1.8]" }, { "name":"BN406_06655 lipA1; Lipoyl synthase\tK03644 lipA; lipoyl synthase [EC:2.8.1.8]" }, { "name":"BN406_06803 lipA3; Lipoyl synthase\tK03644 lipA; lipoyl synthase [EC:2.8.1.8]" }, { "name":"BN406_01183 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02792 lpdV; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02904 LPD2; Dihydrolipoyl dehydrogenase 2, mitochondrial\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_06654 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_01178 pdhA; Pyruvate dehydrogenase E1 component subunit alpha\tK00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]" }, { "name":"BN406_01179 pdhB; Pyruvate dehydrogenase E1 component subunit beta\tK00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]" }, { "name":"BN406_01180 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"BN406_06653 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"BN406_06766 acoC1; Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"BN406_06774 acoC3; Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"BN406_02909 sucA; 2-oxoglutarate dehydrogenase E1 component\tK00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]" }, { "name":"BN406_02908 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex\tK00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]" }, { "name":"BN406_05114 dihydrolipoyllysine-residue succinyltransferase\tK00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]" }, { "name":"BN406_02789 bkdA1; 2-oxoisovalerate dehydrogenase subunit alpha\tK00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]" }, { "name":"BN406_02790 bkdA2; 2-oxoisovalerate dehydrogenase subunit beta\tK00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]" }, { "name":"BN406_05113 transketolase\tK11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]" }, { "name":"BN406_02791 bkdB; Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex\tK09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]" }, { "name":"BN406_01279 gcvP; glycine dehydrogenase\tK00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]" }, { "name":"BN406_01281 gcvT; Aminomethyltransferase, mitochondrial\tK00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]" }, { "name":"BN406_01280 gcvH; glycine cleavage system protein H\tK02437 gcvH; glycine cleavage system H protein" } ] }, { "name":"00790 Folate biosynthesis [PATH:smi00790]", "children":[ { "name":"BN406_01152 folE; GTP cyclohydrolase I\tK01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]" }, { "name":"BN406_02947 alkaline phosphatase transmembrane protein\tK01113 phoD; alkaline phosphatase D [EC:3.1.3.1]" }, { "name":"BN406_01544 folB; dihydroneopterin aldolase DHNA lyase folate biosynthesis protein\tK01633 folB; 7,8-dihydroneopterin aldolase\/epimerase\/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]" }, { "name":"BN406_01543 folK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase\tK00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]" }, { "name":"BN406_01545 folP; dihydropteroate synthase antibiotic resistance transferase folate protein\tK00796 folP; dihydropteroate synthase [EC:2.5.1.15]" }, { "name":"BN406_01948 folA; dihydrofolate reductase\tK00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]" }, { "name":"BN406_03166 folC; bifunctional folylpolyglutamate synthase\/dihydrofolate synthase\tK11754 folC; dihydrofolate synthase \/ folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]" }, { "name":"BN406_00557 RIBBA; Riboflavin biosynthesis protein ribBA, chloroplastic\tK14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase \/ GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]" }, { "name":"BN406_02655 pabB; aminodeoxychorismate synthase\tK01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]" }, { "name":"BN406_02656 class IV aminotransferase\tK02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]" }, { "name":"BN406_05605 exsC; 6-pyruvoyl tetrahydropterin synthase\tK01737 queD; 6-pyruvoyltetrahydropterin\/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]" }, { "name":"BN406_03018 phhB; pterin-4-alpha-carbinolamine dehydratase\tK01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]" }, { "name":"BN406_05606 exsD; hypothetical protein\tK10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]" }, { "name":"BN406_05604 exsB; hypothetical protein\tK06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]" }, { "name":"BN406_02233 7-cyano-7-deazaguanine reductase\tK09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]" }, { "name":"BN406_01598 moaA; Molybdenum cofactor biosynthesis protein A\tK03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]" }, { "name":"BN406_01414 moaC; molybdenum cofactor biosynthesis protein MoaC\tK03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]" }, { "name":"BN406_00903 moaE; molybdopterin MPT converting factor subunit 2\tK03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]" }, { "name":"BN406_00497 moaB; molybdenum cofactor biosynthesis protein B\tK03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]" }, { "name":"BN406_01415 moeA; molybdopterin biosynthesis protein\tK03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]" }, { "name":"BN406_01600 mobA; molybdopterin-guanine dinucleotide biosynthesis protein MobA\tK03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]" } ] }, { "name":"00670 One carbon pool by folate [PATH:smi00670]", "children":[ { "name":"BN406_01948 folA; dihydrofolate reductase\tK00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]" }, { "name":"BN406_02238 fhs; formate--tetrahydrofolate ligase\tK01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]" }, { "name":"BN406_00309 folD2; Bifunctional protein FolD 2\tK01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) \/ methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]" }, { "name":"BN406_03215 folD1; Bifunctional protein FolD 1\tK01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) \/ methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]" }, { "name":"BN406_00943 glyA1; Serine hydroxymethyltransferase 1\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" }, { "name":"BN406_00917 purN; phosphoribosylglycinamide formyltransferase\tK11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]" }, { "name":"BN406_03117 purH; bifunctionalphosphoribosylaminoimidazolecarboxam ide formyltransferase\/IMP cyclohydrolase\tK00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase \/ IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]" }, { "name":"BN406_01281 gcvT; Aminomethyltransferase, mitochondrial\tK00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]" }, { "name":"BN406_01701 methionine synthase I\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"BN406_01716 methyltetrahydrofolate:corrinoid\/iron-sulfur protein methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"BN406_02836 metH; Methionine synthase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"BN406_01950 thyA; thymidylate synthase\tK00560 thyA; thymidylate synthase [EC:2.1.1.45]" }, { "name":"BN406_02793 purU1; Formyltetrahydrofolate deformylase\tK01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]" }, { "name":"BN406_03232 purU3; Formyltetrahydrofolate deformylase\tK01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]" }, { "name":"BN406_01715 oxidoreductase\tK00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]" }, { "name":"BN406_02023 metF; 5,10-methylenetetrahydrofolate reductase\tK00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]" }, { "name":"BN406_02615 5-formyltetrahydrofolate cyclo-ligase\tK01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]" }, { "name":"BN406_03210 hypothetical protein\tK01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]" }, { "name":"BN406_00044 metK; S-adenosylmethionine synthetase\tK00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]" }, { "name":"BN406_03173 ahcY; S-adenosyl-L-homocysteine hydrolase\tK01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]" }, { "name":"BN406_02099 dimethylglycine dehydrogenase\tK00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]" }, { "name":"BN406_04544 dimethylglycine dehydrogenase\tK00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]" }, { "name":"BN406_01279 gcvP; glycine dehydrogenase\tK00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]" }, { "name":"BN406_01183 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02792 lpdV; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02904 LPD2; Dihydrolipoyl dehydrogenase 2, mitochondrial\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_06654 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_01280 gcvH; glycine cleavage system protein H\tK02437 gcvH; glycine cleavage system H protein" }, { "name":"BN406_00603 betA; Choline dehydrogenase\tK00108 betA; choline dehydrogenase [EC:1.1.99.1]" }, { "name":"BN406_00604 betB1; Betaine aldehyde dehydrogenase 1\tK00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]" }, { "name":"BN406_03854 ALDH10A9; Betaine aldehyde dehydrogenase 2, mitochondrial\tK00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]" }, { "name":"BN406_04688 betB2; Betaine aldehyde dehydrogenase 2\tK00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]" } ] }, { "name":"00830 Retinol metabolism" }, { "name":"00860 Porphyrin metabolism [PATH:smi00860]", "children":[ { "name":"BN406_02845 hemA; 5-aminolevulinate synthase\tK00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]" }, { "name":"BN406_04785 hemA; 5-aminolevulinate synthase\tK00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]" }, { "name":"BN406_02759 gltX; Glutamate--tRNA ligase\tK01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]" }, { "name":"BN406_04023 glutamate-1-semialdehyde 2,1-aminomutase\tK01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]" }, { "name":"BN406_06745 threonine dehydratase\tK01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]" }, { "name":"BN406_00939 hemB; delta-aminolevulinic acid dehydratase\tK01698 hemB; porphobilinogen synthase [EC:4.2.1.24]" }, { "name":"BN406_02935 hemC; porphobilinogen deaminase\tK01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]" }, { "name":"BN406_02936 hemD; uroporphyrinogen-III synthase\tK01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]" }, { "name":"BN406_03136 hemE; uroporphyrinogen decarboxylase\tK01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]" }, { "name":"BN406_01560 hemF; coproporphyrinogen III oxidase\tK00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]" }, { "name":"BN406_04410 hemN; Oxygen-independent coproporphyrinogen-III oxidase\tK02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]" }, { "name":"BN406_03135 hypothetical protein\tK08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]" }, { "name":"BN406_02661 hemH; ferrochelatase\tK01772 hemH; protoporphyrin\/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]" }, { "name":"BN406_01200 uroporphyrin-III C-methyltransferase\tK02302 cysG; uroporphyrin-III C-methyltransferase \/ precorrin-2 dehydrogenase \/ sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]" }, { "name":"BN406_05560 precorrin-2 dehydrogenase\tK02302 cysG; uroporphyrin-III C-methyltransferase \/ precorrin-2 dehydrogenase \/ sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]" }, { "name":"BN406_01675 cobA; Uroporphyrinogen-III C-methyltransferase\tK02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]" }, { "name":"BN406_00561 ctaB; Protoheme IX farnesyltransferase\tK02257 COX10; heme o synthase [EC:2.5.1.141]" }, { "name":"BN406_00975 cytochrome C oxidase assembly transmembrane protein\tK02259 COX15; heme a synthase [EC:1.17.99.9]" }, { "name":"BN406_02778 cobI; Precorrin-2 C(20)-methyltransferase\tK03394 cobI-cbiL; precorrin-2\/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]" }, { "name":"BN406_02780 cobG; Precorrin-3B synthase\tK02229 cobG; precorrin-3B synthase [EC:1.14.13.83]" }, { "name":"BN406_02777 cobJ; precorrin-3B C17-methyltransferase\tK05934 cobJ; precorrin-3B C17-methyltransferase \/ cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]" }, { "name":"BN406_02774 cobM; Precorrin-4 C(11)-methyltransferase\tK05936 cobM; precorrin-4\/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]" }, { "name":"BN406_01676 cobE; cobalamin biosynthesis protein\tK02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]" }, { "name":"BN406_02781 cobF; Precorrin-6A synthase [deacetylating]\tK02228 cobF; precorrin-6A synthase [EC:2.1.1.152]" }, { "name":"BN406_02776 cobK; cobalt-precorrin-6x reductase\tK05895 cobK-cbiJ; precorrin-6A\/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]" }, { "name":"BN406_02775 cobL; precorrin-6Y C5,15-methyltransferase (decarboxylating) protein\tK00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase \/ cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]" }, { "name":"BN406_02779 cobH; precorrin-8X methylmutase\tK06042 cobH-cbiC; precorrin-8X\/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]" }, { "name":"BN406_01674 cobB; cobyrinic acid a,c-diamide synthase\tK02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]" }, { "name":"BN406_01687 cobN; cobaltochelatase subunit CobN\tK02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]" }, { "name":"BN406_02530 cobS3; Aerobic cobaltochelatase subunit CobS\tK09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]" }, { "name":"BN406_02529 cobT3; cobalamin biosynthesis protein\tK09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]" }, { "name":"BN406_01494 monooxygenase\tK13786 cobR; cob(II)yrinic acid a,c-diamide reductase [EC:1.16.8.-]" }, { "name":"BN406_02499 hypothetical protein\tK00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]" }, { "name":"BN406_01686 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase\tK19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]" }, { "name":"BN406_01693 cobQ; cobyric acid synthase\tK02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]" }, { "name":"BN406_01672 cobD; cobalamin biosynthesis protein\tK02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]" }, { "name":"BN406_01673 cobC; Threonine-phosphate decarboxylase\tK02225 cobC1; cobalamin biosynthesis protein CobC" }, { "name":"BN406_01689 cobU; adenosylcobinamide kinase\/adenosylcobinamide-phosphate guanylyltransferase\tK02231 cobP; adenosylcobinamide kinase \/ adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]" }, { "name":"BN406_01618 cobS1; cobalamin synthase\tK02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]" }, { "name":"BN406_01617 cobT1; nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase\tK00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]" }, { "name":"BN406_02250 hypothetical protein\tK07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]" }, { "name":"BN406_02967 bfr; bacterioferritin\tK03594 bfr; bacterioferritin [EC:1.16.3.1]" } ] }, { "name":"00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:smi00130]", "children":[ { "name":"BN406_00518 coq2; 4-hydroxybenzoate polyprenyltransferase, mitochondrial\tK03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]" }, { "name":"BN406_04423 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase\tK03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]" }, { "name":"BN406_03997 putative aromatic acid decarboxylase\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]" }, { "name":"BN406_04422 3-octaprenyl-4-hydroxybenzoate carboxy-lyase\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]" }, { "name":"BN406_06523 putative aromatic acid decarboxylase\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]" }, { "name":"BN406_04425 Protease\tK24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15]" }, { "name":"BN406_04426 Peptidase\tK24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15]" }, { "name":"BN406_04424 hypothetical protein\tK24843 ubiT; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) accessory factor UbiT" }, { "name":"BN406_02473 ubiG; 3-demethylubiquinone-9 3-methyltransferase\tK00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase \/ 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]" }, { "name":"BN406_01425 2-octaprenyl-6-methoxyphenyl hydroxylase\tK03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]" }, { "name":"BN406_02987 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase\tK03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]" }, { "name":"BN406_03496 ubiE; Ubiquinone\/menaquinone biosynthesis methyltransferase ubiE\tK03183 ubiE; demethylmenaquinone methyltransferase \/ 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]" }, { "name":"BN406_02772 NADPH dehydrogenase quinone reductase transmembrane protein\tK00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]" }, { "name":"BN406_01374 wrbA1; Flavoprotein WrbA 1\tK03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]" }, { "name":"BN406_03600 wrbA2; Flavoprotein WrbA 2\tK03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]" }, { "name":"BN406_04832 wrbA3; Flavoprotein WrbA 3\tK03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]" }, { "name":"BN406_01904 hypothetical protein\tK19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]" }, { "name":"BN406_02799 vllY; Hemolysin VllY\tK00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]" } ] } ] }, { "name":"09109 Metabolism of terpenoids and polyketides", "children":[ { "name":"00900 Terpenoid backbone biosynthesis [PATH:smi00900]", "children":[ { "name":"BN406_00535 dxs; 1-deoxy-D-xylulose-5-phosphate synthase\tK01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]" }, { "name":"BN406_02844 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase\tK00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]" }, { "name":"BN406_01188 ispDF; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase\/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase\tK12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase \/ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]" }, { "name":"BN406_00498 ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritolkinase\tK00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]" }, { "name":"BN406_03071 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase\tK03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]" }, { "name":"BN406_00567 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase\tK03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]" }, { "name":"BN406_00166 fadA; Putative acyltransferase Rv0859\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_00541 vraB; Putative acetyl-CoA C-acetyltransferase vraB\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_01442 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_03063 phbA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_04528 thlA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_03997 putative aromatic acid decarboxylase\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]" }, { "name":"BN406_04422 3-octaprenyl-4-hydroxybenzoate carboxy-lyase\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]" }, { "name":"BN406_06523 putative aromatic acid decarboxylase\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]" }, { "name":"BN406_03068 ispA; geranyltranstransferase\tK00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]" }, { "name":"BN406_00500 ispB; Octaprenyl-diphosphate synthase\tK02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]" }, { "name":"BN406_01231 uppS; UDP pyrophosphate synthase\tK00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]" } ] }, { "name":"00902 Monoterpenoid biosynthesis" }, { "name":"00909 Sesquiterpenoid and triterpenoid biosynthesis" }, { "name":"00904 Diterpenoid biosynthesis" }, { "name":"00906 Carotenoid biosynthesis [PATH:smi00906]", "children":[ { "name":"BN406_01272 crtB; phytoene synthase\tK02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]" } ] }, { "name":"00905 Brassinosteroid biosynthesis" }, { "name":"00981 Insect hormone biosynthesis" }, { "name":"00908 Zeatin biosynthesis" }, { "name":"00903 Limonene degradation", "children":[ { "name":"BN406_02352 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03510 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03712 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_04757 aldA; Aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_05853 aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" } ] }, { "name":"00907 Pinene, camphor and geraniol degradation [PATH:smi00907]", "children":[ { "name":"BN406_03498 fadB1; putative enoyl-CoA hydratase\tK01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]" }, { "name":"BN406_00165 fadB; putative fatty oxidation complex alpha subunit\tK01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase \/ enoyl-CoA hydratase \/ 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]" }, { "name":"BN406_05948 HMGCL; Hydroxymethylglutaryl-CoA lyase, mitochondrial\tK01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]" } ] }, { "name":"01052 Type I polyketide structures" }, { "name":"00522 Biosynthesis of 12-, 14- and 16-membered macrolides" }, { "name":"01051 Biosynthesis of ansamycins", "children":[ { "name":"BN406_02419 tkt2; Transketolase 2\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_02620 cbbT; Transketolase\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_04021 transketolase\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_04022 transketolase\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_06463 cbbT; Transketolase\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_06671 hypothetical protein\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_06672 Putative transketolase N-terminal section\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"BN406_06679 cbbT; Transketolase\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" } ] }, { "name":"01059 Biosynthesis of enediyne antibiotics" }, { "name":"01056 Biosynthesis of type II polyketide backbone" }, { "name":"01057 Biosynthesis of type II polyketide products" }, { "name":"00253 Tetracycline biosynthesis" }, { "name":"00523 Polyketide sugar unit biosynthesis [PATH:smi00523]", "children":[ { "name":"BN406_05760 rmlA1; Glucose-1-phosphate thymidylyltransferase\tK00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]" }, { "name":"BN406_06071 rmlA3; Glucose-1-phosphate thymidylyltransferase\tK00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]" }, { "name":"BN406_05758 rfbB; dTDP-glucose 4,6-dehydratase\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"BN406_06073 rffG; dTDP-glucose 4,6-dehydratase 2\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"BN406_05431 dTDP-4-dehydrorhamnose 3,5-epimerase\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]" }, { "name":"BN406_05759 dTDP-4-dehydrorhamnose 3,5-epimerase\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]" }, { "name":"BN406_06072 dTDP-4-dehydrorhamnose 3,5-epimerase\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]" }, { "name":"BN406_05757 putative dTDP-4-dehydrorhamnose reductase\tK00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]" }, { "name":"BN406_06074 putative dTDP-4-dehydrorhamnose reductase\tK00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]" }, { "name":"BN406_06421 UDP-glucose 4-epimerase\tK17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25]" } ] }, { "name":"01054 Nonribosomal peptide structures [PATH:smi01054]", "children":[ { "name":"BN406_01902 aspartate racemase\tK01779 racD; aspartate racemase [EC:5.1.1.13]" } ] }, { "name":"01053 Biosynthesis of siderophore group nonribosomal peptides", "children":[ { "name":"BN406_00191 pchB; putative salycilate biosynthesis protein\tK04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]" } ] }, { "name":"01055 Biosynthesis of vancomycin group antibiotics", "children":[ { "name":"BN406_05758 rfbB; dTDP-glucose 4,6-dehydratase\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"BN406_06073 rffG; dTDP-glucose 4,6-dehydratase 2\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" } ] } ] }, { "name":"09110 Biosynthesis of other secondary metabolites", "children":[ { "name":"00940 Phenylpropanoid biosynthesis" }, { "name":"00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis" }, { "name":"00941 Flavonoid biosynthesis" }, { "name":"00944 Flavone and flavonol biosynthesis" }, { "name":"00942 Anthocyanin biosynthesis" }, { "name":"00943 Isoflavonoid biosynthesis" }, { "name":"00946 Degradation of flavonoids [PATH:smi00946]", "children":[ { "name":"BN406_02747 beta-glucosidase\tK05350 bglB; beta-glucosidase [EC:3.2.1.21]" } ] }, { "name":"00901 Indole alkaloid biosynthesis" }, { "name":"00403 Indole diterpene alkaloid biosynthesis" }, { "name":"00950 Isoquinoline alkaloid biosynthesis" }, { "name":"00960 Tropane, piperidine and pyridine alkaloid biosynthesis" }, { "name":"00996 Biosynthesis of various alkaloids" }, { "name":"00232 Caffeine metabolism" }, { "name":"00965 Betalain biosynthesis" }, { "name":"00966 Glucosinolate biosynthesis" }, { "name":"00402 Benzoxazinoid biosynthesis" }, { "name":"00311 Penicillin and cephalosporin biosynthesis", "children":[ { "name":"BN406_00637 blaP; Beta-lactamase\tK17836 penP; beta-lactamase class A [EC:3.5.2.6]" }, { "name":"BN406_02386 putative beta-lactamase protein\tK17836 penP; beta-lactamase class A [EC:3.5.2.6]" }, { "name":"BN406_04841 blaP; Beta-lactamase\tK17836 penP; beta-lactamase class A [EC:3.5.2.6]" }, { "name":"BN406_04842 beta-lactamase\tK17836 penP; beta-lactamase class A [EC:3.5.2.6]" } ] }, { "name":"00332 Carbapenem biosynthesis [PATH:smi00332]", "children":[ { "name":"BN406_02958 proB1; Glutamate 5-kinase 1\tK00931 proB; glutamate 5-kinase [EC:2.7.2.11]" }, { "name":"BN406_02959 proA; gamma-glutamyl phosphate reductase\tK00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]" } ] }, { "name":"00261 Monobactam biosynthesis [PATH:smi00261]", "children":[ { "name":"BN406_04266 nodQ; Bifunctional enzyme NodQ\tK00955 cysNC; bifunctional enzyme CysN\/CysC [EC:2.7.7.4 2.7.1.25]" }, { "name":"BN406_05924 nodQ; Bifunctional enzyme NodQ\tK00955 cysNC; bifunctional enzyme CysN\/CysC [EC:2.7.7.4 2.7.1.25]" }, { "name":"BN406_00598 cysN; Sulfate adenylyltransferase subunit 1\tK00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]" }, { "name":"BN406_00599 cysD; Sulfate adenylyltransferase subunit 2\tK00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]" }, { "name":"BN406_04265 nodP; Sulfate adenylyltransferase subunit 2\tK00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]" }, { "name":"BN406_05925 nodP; Sulfate adenylyltransferase subunit 2\tK00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]" }, { "name":"BN406_02471 lysC; Aspartokinase\tK00928 lysC; aspartate kinase [EC:2.7.2.4]" }, { "name":"BN406_03111 asd; aspartate-semialdehyde dehydrogenase\tK00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]" }, { "name":"BN406_00794 dapA; Dihydrodipicolinate synthase\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"BN406_03767 dihydrodipicolinate synthetase\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"BN406_03851 dihydrodipicolinate synthase\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"BN406_04169 dihydrodipicolinate synthase\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"BN406_05359 dihydrodipicolinate synthase\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"BN406_06518 dapA2; dihydrodipicolinate synthase\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"BN406_03294 dapB; dihydrodipicolinate reductase\tK00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]" } ] }, { "name":"00331 Clavulanic acid biosynthesis" }, { "name":"00521 Streptomycin biosynthesis [PATH:smi00521]", "children":[ { "name":"BN406_03292 glk; glucokinase\tK00845 glk; glucokinase [EC:2.7.1.2]" }, { "name":"BN406_02703 pgm; Phosphoglucomutase\tK01835 pgm; phosphoglucomutase [EC:5.4.2.2]" }, { "name":"BN406_06417 myo-inositol-1-phosphate synthase\tK01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]" }, { "name":"BN406_00464 sulfite biosynthesis protein\tK01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]" }, { "name":"BN406_02636 suhB; Inositol-1-monophosphatase\tK01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]" }, { "name":"BN406_06310 inositol monophosphatase\tK01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]" }, { "name":"BN406_06499 inositol monophosphatase\tK01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]" }, { "name":"BN406_06508 inositol monophosphatase\tK01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]" }, { "name":"BN406_05481 idhA; Inositol 2-dehydrogenase\tK00010 iolG; myo-inositol 2-dehydrogenase \/ D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]" }, { "name":"BN406_06727 idhA; Inositol 2-dehydrogenase\tK00010 iolG; myo-inositol 2-dehydrogenase \/ D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]" }, { "name":"BN406_06786 iolG1; Inositol 2-dehydrogenase 1\tK00010 iolG; myo-inositol 2-dehydrogenase \/ D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]" }, { "name":"BN406_05760 rmlA1; Glucose-1-phosphate thymidylyltransferase\tK00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]" }, { "name":"BN406_06071 rmlA3; Glucose-1-phosphate thymidylyltransferase\tK00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]" }, { "name":"BN406_05758 rfbB; dTDP-glucose 4,6-dehydratase\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"BN406_06073 rffG; dTDP-glucose 4,6-dehydratase 2\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"BN406_05431 dTDP-4-dehydrorhamnose 3,5-epimerase\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]" }, { "name":"BN406_05759 dTDP-4-dehydrorhamnose 3,5-epimerase\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]" }, { "name":"BN406_06072 dTDP-4-dehydrorhamnose 3,5-epimerase\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]" }, { "name":"BN406_05757 putative dTDP-4-dehydrorhamnose reductase\tK00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]" }, { "name":"BN406_06074 putative dTDP-4-dehydrorhamnose reductase\tK00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]" } ] }, { "name":"00524 Neomycin, kanamycin and gentamicin biosynthesis", "children":[ { "name":"BN406_03292 glk; glucokinase\tK00845 glk; glucokinase [EC:2.7.1.2]" } ] }, { "name":"00525 Acarbose and validamycin biosynthesis [PATH:smi00525]", "children":[ { "name":"BN406_05760 rmlA1; Glucose-1-phosphate thymidylyltransferase\tK00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]" }, { "name":"BN406_06071 rmlA3; Glucose-1-phosphate thymidylyltransferase\tK00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]" }, { "name":"BN406_05758 rfbB; dTDP-glucose 4,6-dehydratase\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"BN406_06073 rffG; dTDP-glucose 4,6-dehydratase 2\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" } ] }, { "name":"00401 Novobiocin biosynthesis [PATH:smi00401]", "children":[ { "name":"BN406_02519 tyrC; Protein tyrC\tK00220 tyrC; cyclohexadieny\/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]" }, { "name":"BN406_02175 aatA; Aspartate aminotransferase A\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_03087 aatB; Aspartate aminotransferase B\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_03964 aatB; Aspartate aminotransferase B\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_00708 histidinol-phosphate aminotransferase\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_02520 hisC1; Histidinol-phosphate aminotransferase 1\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_03069 hisC2; Histidinol-phosphate aminotransferase 2\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_03628 hisC3; Histidinol-phosphate aminotransferase 3\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_03438 tatA3; Tyrosine aminotransferase\tK00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]" } ] }, { "name":"00404 Staurosporine biosynthesis" }, { "name":"00405 Phenazine biosynthesis", "children":[ { "name":"BN406_01860 putative isomerase mll1393\tK06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]" }, { "name":"BN406_02626 hypothetical protein\tK06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]" } ] }, { "name":"00333 Prodigiosin biosynthesis", "children":[ { "name":"BN406_00877 fabD; Malonyl CoA-acyl carrier protein transacylase\tK00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]" }, { "name":"BN406_00878 nodG; Nodulation protein G\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_01391 putative short-chain dehydrogenase\/reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_02869 oxidoreductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03494 3-oxoacyl-ACP reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03670 Short-chain type dehydrogenase\/reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03731 short chain dehydrogenase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03760 short-chain dehydrogenase\/reductase SDR\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03856 short-chain dehydrogenase\/reductase SDR\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03879 3-ketoacyl-ACP reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_04264 nodG; Nodulation protein G\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_04355 Short-chain type dehydrogenase\/reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_06191 Short-chain type dehydrogenase\/reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_06222 3-oxoacyl-(acyl-carrier-protein) reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_06762 hypothetical protein\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_00553 fabI1; Enoyl-[acyl-carrier-protein] reductase [NADH] 1\tK00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]" }, { "name":"BN406_03377 fabI2; Enoyl-[acyl-carrier-protein] reductase [NADH] 2\tK00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]" }, { "name":"BN406_04095 fabI1; Enoyl-[acyl-carrier-protein] reductase [NADH] 1\tK00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]" } ] }, { "name":"00254 Aflatoxin biosynthesis" }, { "name":"00975 Biosynthesis of various siderophores" }, { "name":"00998 Biosynthesis of various antibiotics", "children":[ { "name":"BN406_00879 unnamed protein product\tK02078 acpP; acyl carrier protein" }, { "name":"BN406_02135 unnamed protein product\tK02078 acpP; acyl carrier protein" }, { "name":"BN406_05985 hypothetical protein\tK02078 acpP; acyl carrier protein" }, { "name":"BN406_06019 unnamed protein product\tK02078 acpP; acyl carrier protein" }, { "name":"BN406_06109 hypothetical protein\tK02078 acpP; acyl carrier protein" } ] }, { "name":"00999 Biosynthesis of various plant secondary metabolites [PATH:smi00999]", "children":[ { "name":"BN406_00044 metK; S-adenosylmethionine synthetase\tK00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]" }, { "name":"BN406_03139 aroE; Shikimate dehydrogenase\tK00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]" }, { "name":"BN406_02747 beta-glucosidase\tK05350 bglB; beta-glucosidase [EC:3.2.1.21]" } ] }, { "name":"00997 Biosynthesis of various other secondary metabolites" } ] }, { "name":"09111 Xenobiotics biodegradation and metabolism", "children":[ { "name":"00362 Benzoate degradation [PATH:smi00362]", "children":[ { "name":"BN406_05215 3-oxoadipate enol-lactonase\tK01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]" }, { "name":"BN406_06722 pcaD; beta-ketoadipate enol-lactone hydrolase\tK01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]" }, { "name":"BN406_06724 pcaI; 3-oxoadipate CoA-transferase subunit A\tK01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6]" }, { "name":"BN406_06725 pcaJ; 3-oxoadipate CoA-transferase subunit B\tK01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6]" }, { "name":"BN406_05205 pcaF; Beta-ketoadipyl-CoA thiolase\tK07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]" }, { "name":"BN406_06726 pcaF; Beta-ketoadipyl-CoA thiolase\tK07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]" }, { "name":"BN406_00642 hypothetical protein\tK07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]" }, { "name":"BN406_01699 hypothetical protein\tK01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]" }, { "name":"BN406_04354 unnamed protein product\tK01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]" }, { "name":"BN406_06455 hypothetical protein\tK01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]" }, { "name":"BN406_06712 chqB; Hydroxyquinol 1,2-dioxygenase\tK04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]" }, { "name":"BN406_06708 tftE; Maleylacetate reductase\tK00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]" }, { "name":"BN406_05218 pcaG; Protocatechuate 3,4-dioxygenase alpha chain\tK00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]" }, { "name":"BN406_06719 pcaG; Protocatechuate 3,4-dioxygenase alpha chain\tK00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]" }, { "name":"BN406_05217 pcaH; Protocatechuate 3,4-dioxygenase beta chain\tK00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]" }, { "name":"BN406_06720 pcaH; Protocatechuate 3,4-dioxygenase beta chain\tK00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]" }, { "name":"BN406_05219 3-carboxy-cis,cis-muconate cycloisomerase\tK01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]" }, { "name":"BN406_03587 Carboxymuconolactone decarboxylase\tK01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]" }, { "name":"BN406_03860 putative carboxymuconolactone decarboxylase\tK01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]" }, { "name":"BN406_05216 4-carboxymuconolactone decarboxylase\tK01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]" }, { "name":"BN406_06721 gamma carboxymuconolactone decarboxylase\tK01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]" }, { "name":"BN406_00447 oxidoreductase\tK00529 hcaD; 3-phenylpropionate\/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]" }, { "name":"BN406_02372 ferredoxin reductase\tK00529 hcaD; 3-phenylpropionate\/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]" }, { "name":"BN406_02376 ferredoxin--NAD(+) reductase\tK00529 hcaD; 3-phenylpropionate\/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]" }, { "name":"BN406_06058 andAa; Anthranilate 1,2-dioxygenase system ferredoxin--NAD(+) reductase component\tK00529 hcaD; 3-phenylpropionate\/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]" }, { "name":"BN406_01547 fdx; ferredoxin, 2FE-2S FDII electron transport IRON-sulfur protein\tK04755 fdx; ferredoxin, 2Fe-2S" }, { "name":"BN406_05211 pobA; p-hydroxybenzoate hydroxylase\tK00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]" }, { "name":"BN406_00165 fadB; putative fatty oxidation complex alpha subunit\tK01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase \/ enoyl-CoA hydratase \/ 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]" }, { "name":"BN406_05156 3-hydroxybutyryl-CoA epimerase\tK07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]" }, { "name":"BN406_05811 putative glutaryl-CoA dehydrogenase, mitochondrial\tK00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]" }, { "name":"BN406_03498 fadB1; putative enoyl-CoA hydratase\tK01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]" }, { "name":"BN406_02503 hbdA; 3-hydroxybutyryl-CoA dehydrogenase\tK00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]" }, { "name":"BN406_00166 fadA; Putative acyltransferase Rv0859\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_00541 vraB; Putative acetyl-CoA C-acetyltransferase vraB\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_01442 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_03063 phbA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_04528 thlA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" } ] }, { "name":"00627 Aminobenzoate degradation [PATH:smi00627]", "children":[ { "name":"BN406_01929 nthA; nitrile hydratase subunit alpha protein\tK01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]" }, { "name":"BN406_01927 nthB; nitrile hydratase subunit beta protein\tK20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]" }, { "name":"BN406_03520 Amidase\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_04031 6-aminohexanoate-cyclic-dimer hydrolase\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_04489 amidase\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_06699 hypothetical protein\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_06704 hypothetical protein\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_05204 acylphosphatase\tK01512 acyP; acylphosphatase [EC:3.6.1.7]" }, { "name":"BN406_03997 putative aromatic acid decarboxylase\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]" }, { "name":"BN406_04422 3-octaprenyl-4-hydroxybenzoate carboxy-lyase\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]" }, { "name":"BN406_06523 putative aromatic acid decarboxylase\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]" }, { "name":"BN406_03498 fadB1; putative enoyl-CoA hydratase\tK01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]" } ] }, { "name":"00364 Fluorobenzoate degradation [PATH:smi00364]", "children":[ { "name":"BN406_01929 nthA; nitrile hydratase subunit alpha protein\tK01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]" }, { "name":"BN406_01927 nthB; nitrile hydratase subunit beta protein\tK20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]" }, { "name":"BN406_06708 tftE; Maleylacetate reductase\tK00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]" } ] }, { "name":"00625 Chloroalkane and chloroalkene degradation [PATH:smi00625]", "children":[ { "name":"BN406_00627 probabable alcohol dehydrogenase\tK13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]" }, { "name":"BN406_04098 adhA1; Alcohol dehydrogenase\tK13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]" }, { "name":"BN406_04429 adhA3; Alcohol dehydrogenase\tK13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]" }, { "name":"BN406_01125 adhI; Alcohol dehydrogenase class-3\tK00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase \/ alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]" }, { "name":"BN406_06487 adhI; Alcohol dehydrogenase class-3\tK00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase \/ alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]" }, { "name":"BN406_02352 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03510 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_03712 Putative aldehyde dehydrogenase SAB2006c\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_04757 aldA; Aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_05853 aldehyde dehydrogenase\tK00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]" }, { "name":"BN406_04239 nifK1; Nitrogenase molybdenum-iron protein beta chain\tK02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]" }, { "name":"BN406_04237 nifH; Nitrogenase iron protein\tK02588 nifH; nitrogenase iron protein NifH" }, { "name":"BN406_04238 nifD1; Nitrogenase molybdenum-iron protein alpha chain\tK02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]" }, { "name":"BN406_00625 dhe; alpha-halocarboxylic acid dehalogenase\tK01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]" }, { "name":"BN406_04761 haloacid dehalogenase\tK01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]" }, { "name":"BN406_04859 hydrolase\tK01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]" } ] }, { "name":"00361 Chlorocyclohexane and chlorobenzene degradation [PATH:smi00361]", "children":[ { "name":"BN406_06708 tftE; Maleylacetate reductase\tK00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]" }, { "name":"BN406_06712 chqB; Hydroxyquinol 1,2-dioxygenase\tK04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]" }, { "name":"BN406_00642 hypothetical protein\tK07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]" }, { "name":"BN406_00625 dhe; alpha-halocarboxylic acid dehalogenase\tK01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]" }, { "name":"BN406_04761 haloacid dehalogenase\tK01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]" }, { "name":"BN406_04859 hydrolase\tK01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]" } ] }, { "name":"00623 Toluene degradation [PATH:smi00623]", "children":[ { "name":"BN406_03726 xylB; Aryl-alcohol dehydrogenase\tK00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]" }, { "name":"BN406_06708 tftE; Maleylacetate reductase\tK00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]" } ] }, { "name":"00622 Xylene degradation [PATH:smi00622]", "children":[ { "name":"BN406_03726 xylB; Aryl-alcohol dehydrogenase\tK00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]" }, { "name":"BN406_00642 hypothetical protein\tK07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]" }, { "name":"BN406_01699 hypothetical protein\tK01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]" }, { "name":"BN406_04354 unnamed protein product\tK01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]" }, { "name":"BN406_06455 hypothetical protein\tK01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]" } ] }, { "name":"00633 Nitrotoluene degradation [PATH:smi00633]", "children":[ { "name":"BN406_01297 nemA; N-ethylmaleimide reductase\tK10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]" }, { "name":"BN406_04611 OPR1; 12-oxophytodienoate reductase 1\tK10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]" } ] }, { "name":"00642 Ethylbenzene degradation" }, { "name":"00643 Styrene degradation [PATH:smi00643]", "children":[ { "name":"BN406_02796 hmgA; homogentisate 1,2-dioxygenase\tK00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]" }, { "name":"BN406_02794 maiA; Maleylacetoacetate isomerase\tK01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]" }, { "name":"BN406_02795 aromatic amino acid degradation protein\tK16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]" }, { "name":"BN406_01929 nthA; nitrile hydratase subunit alpha protein\tK01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]" }, { "name":"BN406_01927 nthB; nitrile hydratase subunit beta protein\tK20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]" }, { "name":"BN406_03520 Amidase\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_04031 6-aminohexanoate-cyclic-dimer hydrolase\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_04489 amidase\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_06699 hypothetical protein\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_06704 hypothetical protein\tK01426 E3.5.1.4; amidase [EC:3.5.1.4]" }, { "name":"BN406_00642 hypothetical protein\tK07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]" }, { "name":"BN406_05207 catI; 3-oxoadipate CoA-transferase subunit A\tK01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]" }, { "name":"BN406_05206 CoA-transferase subunit B protein\tK01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]" }, { "name":"BN406_03100 acyl-COA transferase\tK01026 pct; propionate CoA-transferase [EC:2.8.3.1]" }, { "name":"BN406_04505 acyl-CoA transferase\tK01026 pct; propionate CoA-transferase [EC:2.8.3.1]" } ] }, { "name":"00791 Atrazine degradation", "children":[ { "name":"BN406_02319 ureC; Urease subunit alpha\tK01428 ureC; urease subunit alpha [EC:3.5.1.5]" }, { "name":"BN406_02322 ureB; Urease subunit beta\tK01429 ureB; urease subunit beta [EC:3.5.1.5]" }, { "name":"BN406_02324 ureA; urease subunit gamma\tK01430 ureA; urease subunit gamma [EC:3.5.1.5]" } ] }, { "name":"00930 Caprolactam degradation [PATH:smi00930]", "children":[ { "name":"BN406_04976 gluconolactonase\tK01053 gnl; gluconolactonase [EC:3.1.1.17]" }, { "name":"BN406_06225 putative gluconolactonase precursor protein\tK01053 gnl; gluconolactonase [EC:3.1.1.17]" }, { "name":"BN406_03498 fadB1; putative enoyl-CoA hydratase\tK01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]" }, { "name":"BN406_00165 fadB; putative fatty oxidation complex alpha subunit\tK01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase \/ enoyl-CoA hydratase \/ 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]" } ] }, { "name":"00363 Bisphenol degradation" }, { "name":"00621 Dioxin degradation", "children":[ { "name":"BN406_01699 hypothetical protein\tK01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]" }, { "name":"BN406_04354 unnamed protein product\tK01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]" }, { "name":"BN406_06455 hypothetical protein\tK01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]" } ] }, { "name":"00626 Naphthalene degradation [PATH:smi00626]", "children":[ { "name":"BN406_00627 probabable alcohol dehydrogenase\tK13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]" }, { "name":"BN406_04098 adhA1; Alcohol dehydrogenase\tK13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]" }, { "name":"BN406_04429 adhA3; Alcohol dehydrogenase\tK13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]" }, { "name":"BN406_01125 adhI; Alcohol dehydrogenase class-3\tK00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase \/ alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]" }, { "name":"BN406_06487 adhI; Alcohol dehydrogenase class-3\tK00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase \/ alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]" } ] }, { "name":"00624 Polycyclic aromatic hydrocarbon degradation", "children":[ { "name":"BN406_05218 pcaG; Protocatechuate 3,4-dioxygenase alpha chain\tK00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]" }, { "name":"BN406_06719 pcaG; Protocatechuate 3,4-dioxygenase alpha chain\tK00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]" }, { "name":"BN406_05217 pcaH; Protocatechuate 3,4-dioxygenase beta chain\tK00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]" }, { "name":"BN406_06720 pcaH; Protocatechuate 3,4-dioxygenase beta chain\tK00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]" } ] }, { "name":"00365 Furfural degradation" }, { "name":"00984 Steroid degradation" }, { "name":"00980 Metabolism of xenobiotics by cytochrome P450" }, { "name":"00982 Drug metabolism - cytochrome P450" }, { "name":"00983 Drug metabolism - other enzymes" } ] }, { "name":"09112 Not included in regular maps", "children":[ { "name":"09113 Global maps only" } ] } ] }, { "name":"09120 Genetic Information Processing", "children":[ { "name":"09121 Transcription", "children":[ { "name":"03020 RNA polymerase [PATH:smi03020]", "children":[ { "name":"BN406_01078 rpoB; DNA-directed RNA polymerase subunit beta\tK03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]" }, { "name":"BN406_01079 rpoC; DNA-directed RNA polymerase subunit beta'\tK03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]" }, { "name":"BN406_01111 rpoA; DNA-directed RNA polymerase subunit alpha\tK03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]" }, { "name":"BN406_00799 rpoZ; DNA-directed RNA polymerase subunit omega\tK03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]" } ] }, { "name":"03022 Basal transcription factors" }, { "name":"03040 Spliceosome" } ] }, { "name":"09122 Translation", "children":[ { "name":"03010 Ribosome [PATH:smi03010]", "children":[ { "name":"BN406_RNA00042 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"BN406_RNA00051 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"BN406_RNA00055 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"BN406_RNA00039 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"BN406_RNA00048 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"BN406_RNA00058 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"BN406_RNA00038 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"BN406_RNA00047 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"BN406_RNA00059 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"BN406_03386 rpsA; 30S ribosomal protein S1\tK02945 RP-S1; small subunit ribosomal protein S1" }, { "name":"BN406_01227 rpsB; 30S ribosomal protein S2\tK02967 RP-S2; small subunit ribosomal protein S2" }, { "name":"BN406_01093 rpsC; 30S ribosomal protein S3\tK02982 RP-S3; small subunit ribosomal protein S3" }, { "name":"BN406_01520 rpsD; 30S ribosomal protein S4\tK02986 RP-S4; small subunit ribosomal protein S4" }, { "name":"BN406_01104 rpsE; 30S ribosomal protein S5\tK02988 RP-S5; small subunit ribosomal protein S5" }, { "name":"BN406_00874 rpsF; 30S ribosomal protein S6\tK02990 RP-S6; small subunit ribosomal protein S6" }, { "name":"BN406_01083 rpsG; 30S ribosomal protein S7\tK02992 RP-S7; small subunit ribosomal protein S7" }, { "name":"BN406_01101 rpsH; 30S ribosomal protein S8\tK02994 RP-S8; small subunit ribosomal protein S8" }, { "name":"BN406_00978 rpsI; 30S ribosomal protein S9\tK02996 RP-S9; small subunit ribosomal protein S9" }, { "name":"BN406_01086 rpsJ; 30S ribosomal protein S10\tK02946 RP-S10; small subunit ribosomal protein S10" }, { "name":"BN406_01110 rpsK; 30S ribosomal protein S11\tK02948 RP-S11; small subunit ribosomal protein S11" }, { "name":"BN406_01082 rpsL; 30S ribosomal protein S12\tK02950 RP-S12; small subunit ribosomal protein S12" }, { "name":"BN406_01109 rpsM; 30S ribosomal protein S13\tK02952 RP-S13; small subunit ribosomal protein S13" }, { "name":"BN406_01100 rpsN; 30S ribosomal protein S14\tK02954 RP-S14; small subunit ribosomal protein S14" }, { "name":"BN406_03374 rpsO; 30S ribosomal protein S15\tK02956 RP-S15; small subunit ribosomal protein S15" }, { "name":"BN406_03043 rpsP; 30S ribosomal protein S16\tK02959 RP-S16; small subunit ribosomal protein S16" }, { "name":"BN406_01096 rpsQ; 30S ribosomal protein S17\tK02961 RP-S17; small subunit ribosomal protein S17" }, { "name":"BN406_00873 rpsR; 30S ribosomal protein S18\tK02963 RP-S18; small subunit ribosomal protein S18" }, { "name":"BN406_01091 rpsS; 30S ribosomal protein S19\tK02965 RP-S19; small subunit ribosomal protein S19" }, { "name":"BN406_03499 rpsT; 30S ribosomal protein S20\tK02968 RP-S20; small subunit ribosomal protein S20" }, { "name":"BN406_01878 unnamed protein product\tK02970 RP-S21; small subunit ribosomal protein S21" }, { "name":"BN406_02712 unnamed protein product\tK02970 RP-S21; small subunit ribosomal protein S21" }, { "name":"BN406_01075 rplA; 50S ribosomal protein L1\tK02863 RP-L1; large subunit ribosomal protein L1" }, { "name":"BN406_01090 rplB; 50S ribosomal protein L2\tK02886 RP-L2; large subunit ribosomal protein L2" }, { "name":"BN406_01087 rplC; 50S ribosomal protein L3\tK02906 RP-L3; large subunit ribosomal protein L3" }, { "name":"BN406_01088 rplD; 50S ribosomal protein L4\tK02926 RP-L4; large subunit ribosomal protein L4" }, { "name":"BN406_01099 rplE; 50S ribosomal protein L5\tK02931 RP-L5; large subunit ribosomal protein L5" }, { "name":"BN406_01102 rplF; 50S ribosomal protein L6\tK02933 RP-L6; large subunit ribosomal protein L6" }, { "name":"BN406_00871 rplI; 50S ribosomal protein L9\tK02939 RP-L9; large subunit ribosomal protein L9" }, { "name":"BN406_01076 rplJ; 50S ribosomal protein L10\tK02864 RP-L10; large subunit ribosomal protein L10" }, { "name":"BN406_01074 rplK; 50S ribosomal protein L11\tK02867 RP-L11; large subunit ribosomal protein L11" }, { "name":"BN406_01077 rplL; 50S ribosomal protein L7\/L12\tK02935 RP-L7; large subunit ribosomal protein L7\/L12" }, { "name":"BN406_00979 rplM; 50S ribosomal protein L13\tK02871 RP-L13; large subunit ribosomal protein L13" }, { "name":"BN406_01097 rplN; 50S ribosomal protein L14\tK02874 RP-L14; large subunit ribosomal protein L14" }, { "name":"BN406_01106 rplO; 50S ribosomal protein L15\tK02876 RP-L15; large subunit ribosomal protein L15" }, { "name":"BN406_01094 rplP; 50S ribosomal protein L16\tK02878 RP-L16; large subunit ribosomal protein L16" }, { "name":"BN406_01112 rplQ; 50S ribosomal protein L17\tK02879 RP-L17; large subunit ribosomal protein L17" }, { "name":"BN406_01103 rplR; 50S ribosomal protein L18\tK02881 RP-L18; large subunit ribosomal protein L18" }, { "name":"BN406_03047 rplS; 50S ribosomal protein L19\tK02884 RP-L19; large subunit ribosomal protein L19" }, { "name":"BN406_03416 rplT; 50S ribosomal protein L20\tK02887 RP-L20; large subunit ribosomal protein L20" }, { "name":"BN406_02953 rplU; 50S ribosomal protein L21\tK02888 RP-L21; large subunit ribosomal protein L21" }, { "name":"BN406_01092 rplV; 50S ribosomal protein L22\tK02890 RP-L22; large subunit ribosomal protein L22" }, { "name":"BN406_01089 rplW; 50S ribosomal protein L23\tK02892 RP-L23; large subunit ribosomal protein L23" }, { "name":"BN406_01098 rplX; 50S ribosomal protein L24\tK02895 RP-L24; large subunit ribosomal protein L24" }, { "name":"BN406_02204 rplY; 50S ribosomal protein L25\tK02897 RP-L25; large subunit ribosomal protein L25" }, { "name":"BN406_02954 rpmA; 50S ribosomal protein L27\tK02899 RP-L27; large subunit ribosomal protein L27" }, { "name":"BN406_02526 rpmB; 50S ribosomal protein L28\tK02902 RP-L28; large subunit ribosomal protein L28" }, { "name":"BN406_01095 rpmC; 50S ribosomal protein L29\tK02904 RP-L29; large subunit ribosomal protein L29" }, { "name":"BN406_01105 rpmD; 50S ribosomal protein L30\tK02907 RP-L30; large subunit ribosomal protein L30" }, { "name":"BN406_02632 rpmE; 50S ribosomal protein L31\tK02909 RP-L31; large subunit ribosomal protein L31" }, { "name":"BN406_03065 rpmF; 50S ribosomal protein L32\tK02911 RP-L32; large subunit ribosomal protein L32" }, { "name":"BN406_01029 rpmG; 50S ribosomal protein L33\tK02913 RP-L33; large subunit ribosomal protein L33" }, { "name":"BN406_03415 rpmI; 50S ribosomal protein L35\tK02916 RP-L35; large subunit ribosomal protein L35" }, { "name":"BN406_02645 rpmJ; 50S ribosomal protein L36\tK02919 RP-L36; large subunit ribosomal protein L36" } ] }, { "name":"00970 Aminoacyl-tRNA biosynthesis [PATH:smi00970]", "children":[ { "name":"BN406_RNA00023 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"BN406_RNA00040 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"BN406_RNA00049 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"BN406_RNA00057 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"BN406_RNA00062 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"BN406_RNA00001 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"BN406_RNA00028 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"BN406_RNA00052 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"BN406_RNA00065 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"BN406_RNA00025 tRNA-Asn\tK14220 tRNA-Asn; tRNA Asn" }, { "name":"BN406_RNA00014 tRNA-Asp\tK14221 tRNA-Asp; tRNA Asp" }, { "name":"BN406_RNA00015 tRNA-Asp\tK14221 tRNA-Asp; tRNA Asp" }, { "name":"BN406_RNA00024 tRNA-Cys\tK14222 tRNA-Cys; tRNA Cys" }, { "name":"BN406_RNA00007 tRNA-Gln\tK14223 tRNA-Gln; tRNA Gln" }, { "name":"BN406_RNA00008 tRNA-Gln\tK14223 tRNA-Gln; tRNA Gln" }, { "name":"BN406_RNA00030 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"BN406_RNA00031 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"BN406_RNA00032 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"BN406_RNA00033 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"BN406_RNA00003 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"BN406_RNA00018 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"BN406_RNA00054 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"BN406_RNA00006 tRNA-His\tK14226 tRNA-His; tRNA His" }, { "name":"BN406_RNA00041 tRNA-Ile\tK14227 tRNA-Ile; tRNA Ile" }, { "name":"BN406_RNA00050 tRNA-Ile\tK14227 tRNA-Ile; tRNA Ile" }, { "name":"BN406_RNA00056 tRNA-Ile\tK14227 tRNA-Ile; tRNA Ile" }, { "name":"BN406_RNA00020 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"BN406_RNA00021 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"BN406_RNA00026 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"BN406_RNA00043 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"BN406_RNA00063 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"BN406_RNA00027 tRNA-Lys\tK14229 tRNA-Lys; tRNA Lys" }, { "name":"BN406_RNA00035 tRNA-Lys\tK14229 tRNA-Lys; tRNA Lys" }, { "name":"BN406_RNA00010 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"BN406_RNA00034 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"BN406_RNA00036 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"BN406_RNA00037 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"BN406_RNA00044 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"BN406_RNA00046 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"BN406_RNA00060 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"BN406_RNA00005 tRNA-Phe\tK14231 tRNA-Phe; tRNA Phe" }, { "name":"BN406_RNA00009 tRNA-Pro\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"BN406_RNA00012 tRNA-Pro\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"BN406_RNA00029 tRNA-Pro\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"BN406_RNA00011 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"BN406_RNA00022 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"BN406_RNA00053 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"BN406_RNA00061 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"BN406_RNA00002 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"BN406_RNA00004 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"BN406_RNA00016 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"BN406_RNA00019 tRNA-Trp\tK14235 tRNA-Trp; tRNA Trp" }, { "name":"BN406_RNA00017 tRNA-Tyr\tK14236 tRNA-Tyr; tRNA Tyr" }, { "name":"BN406_RNA00013 tRNA-Val\tK14237 tRNA-Val; tRNA Val" }, { "name":"BN406_RNA00045 tRNA-Val\tK14237 tRNA-Val; tRNA Val" }, { "name":"BN406_02759 gltX; Glutamate--tRNA ligase\tK01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]" }, { "name":"BN406_01045 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A\tK02433 gatA; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]" }, { "name":"BN406_02949 amidase\tK02433 gatA; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]" }, { "name":"BN406_03336 hypothetical protein\tK02433 gatA; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]" }, { "name":"BN406_01047 gatB; aspartyl\/glutamyl-tRNA amidotransferase subunit B\tK02434 gatB; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]" }, { "name":"BN406_01044 gatC; aspartyl\/glutamyl-tRNA amidotransferase subunit C\tK02435 gatC; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]" }, { "name":"BN406_01531 alaS; Alanine--tRNA ligase\tK01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]" }, { "name":"BN406_00929 aspS; Aspartate--tRNA ligase\tK01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]" }, { "name":"BN406_00505 glyQ; glycyl-tRNA synthetase subunit alpha\tK01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]" }, { "name":"BN406_00509 glyS; glycyl-tRNA synthetase subunit beta\tK01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]" }, { "name":"BN406_01157 thrS; Threonine--tRNA ligase\tK01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]" }, { "name":"BN406_01263 serS; seryl-tRNA synthetase\tK01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]" }, { "name":"BN406_05082 selA; L-seryl-tRNA(Sec) selenium transferase\tK01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]" }, { "name":"BN406_00847 cysS; cysteinyl-tRNA synthetase\tK01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]" }, { "name":"BN406_01337 metG; Methionine--tRNA ligase\tK01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]" }, { "name":"BN406_00053 fmt; Methionyl-tRNA formyltransferase\tK00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]" }, { "name":"BN406_01247 valS; Valine--tRNA ligase\tK01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]" }, { "name":"BN406_03126 leuS; Leucine--tRNA ligase\tK01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]" }, { "name":"BN406_00453 ileS; Isoleucine--tRNA ligase\tK01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]" }, { "name":"BN406_02760 lysS; Lysine--tRNA ligase\tK04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]" }, { "name":"BN406_01254 argS; arginyl-tRNA synthetase\tK01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]" }, { "name":"BN406_01020 proS; Proline--tRNA ligase\tK01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]" }, { "name":"BN406_00443 hisS; Histidine--tRNA ligase\tK01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]" }, { "name":"BN406_03417 pheS; phenylalanyl-tRNA synthetase subunit alpha\tK01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]" }, { "name":"BN406_03418 pheT; phenylalanyl-tRNA synthetase subunit beta\tK01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]" }, { "name":"BN406_01481 tyrS; tyrosyl-tRNA synthetase\tK01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]" }, { "name":"BN406_00032 trpS; tryptophanyl-tRNA synthetase\tK01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]" } ] }, { "name":"03013 Nucleocytoplasmic transport" }, { "name":"03015 mRNA surveillance pathway" }, { "name":"03008 Ribosome biogenesis in eukaryotes", "children":[ { "name":"BN406_00807 rncS; ribonuclease III\tK03685 rnc; ribonuclease III [EC:3.1.26.3]" } ] } ] }, { "name":"09123 Folding, sorting and degradation", "children":[ { "name":"03060 Protein export [PATH:smi03060]", "children":[ { "name":"BN406_01107 secY; preprotein translocase subunit SecY\tK03076 secY; preprotein translocase subunit SecY" }, { "name":"BN406_01072 secE; preprotein translocase subunit SecE\tK03073 secE; preprotein translocase subunit SecE" }, { "name":"BN406_01171 secG; preprotein translocase subunit SecG\tK03075 secG; preprotein translocase subunit SecG" }, { "name":"BN406_00204 secD2; bifunctional preprotein translocase subunit SecD\/SecF\tK12257 secDF; SecD\/SecF fusion protein" }, { "name":"BN406_01270 protein-export membrane protein SecD\tK12257 secDF; SecD\/SecF fusion protein" }, { "name":"BN406_01269 YAJC protein\tK03210 yajC; preprotein translocase subunit YajC" }, { "name":"BN406_00076 inner membrane protein translocase component YidC\tK03217 yidC; YidC\/Oxa1 family membrane protein insertase" }, { "name":"BN406_02485 secA; preprotein translocase subunit SecA\tK03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]" }, { "name":"BN406_03142 secB; preprotein translocase subunit SecB\tK03071 secB; preprotein translocase subunit SecB" }, { "name":"BN406_03041 ffh; Signal recognition particle protein\tK03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]" }, { "name":"BN406_03038 ftsY; Signal recognition particle receptor FtsY\tK03110 ftsY; fused signal recognition particle receptor" }, { "name":"BN406_01260 tatA1; twin arginine translocase A\tK03116 tatA; sec-independent protein translocase protein TatA" }, { "name":"BN406_01261 tatB; sec-independent translocase\tK03117 tatB; sec-independent protein translocase protein TatB" }, { "name":"BN406_01262 tatC; SEC-independent translocase transmembrane protein\tK03118 tatC; sec-independent protein translocase protein TatC" }, { "name":"BN406_00806 lepB; signal peptidase I transmembrane protein\tK03100 lepB; signal peptidase I [EC:3.4.21.89]" }, { "name":"BN406_00024 lspA; lipoprotein signal peptidase\tK03101 lspA; signal peptidase II [EC:3.4.23.36]" } ] }, { "name":"04141 Protein processing in endoplasmic reticulum", "children":[ { "name":"BN406_05809 htpG; molecular chaperone HtpG\tK04079 HSP90A; molecular chaperone HtpG" } ] }, { "name":"04130 SNARE interactions in vesicular transport" }, { "name":"04120 Ubiquitin mediated proteolysis" }, { "name":"04122 Sulfur relay system [PATH:smi04122]", "children":[ { "name":"BN406_01478 nifS; pyridoxal-phosphate-dependent aminotransferase\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]" }, { "name":"BN406_01359 STR1; Thiosulfate\/3-mercaptopyruvate sulfurtransferase 1, mitochondrial\tK01011 TST; thiosulfate\/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]" }, { "name":"BN406_05676 thtR; sulfurtransferase\tK01011 TST; thiosulfate\/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]" }, { "name":"BN406_02542 hypothetical protein\tK04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]" }, { "name":"BN406_02570 mnmA; tRNA-specific 2-thiouridylase MnmA\tK00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]" }, { "name":"BN406_00903 moaE; molybdopterin MPT converting factor subunit 2\tK03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]" }, { "name":"BN406_01598 moaA; Molybdenum cofactor biosynthesis protein A\tK03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]" }, { "name":"BN406_00904 moaD; molybdopterin MPT converting factor subunit 1\tK03636 moaD; sulfur-carrier protein" }, { "name":"BN406_04916 hypothetical protein\tK03636 moaD; sulfur-carrier protein" }, { "name":"BN406_03319 thiF; molybdopterin biosynthesis protein MoeB\tK21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]" }, { "name":"BN406_01414 moaC; molybdenum cofactor biosynthesis protein MoaC\tK03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]" }, { "name":"BN406_00497 moaB; molybdenum cofactor biosynthesis protein B\tK03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]" }, { "name":"BN406_05179 unnamed protein product\tK03154 thiS; sulfur carrier protein" } ] }, { "name":"03050 Proteasome" }, { "name":"03018 RNA degradation [PATH:smi03018]", "children":[ { "name":"BN406_02966 rppH; RNA pyrophosphohydrolase\tK08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]" }, { "name":"BN406_01058 rne; ribonuclease E protein\tK08300 rne; ribonuclease E [EC:3.1.26.12]" }, { "name":"BN406_01175 eno; phosphopyruvate hydratase\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]" }, { "name":"BN406_03375 pnp; Polyribonucleotide nucleotidyltransferase\tK00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]" }, { "name":"BN406_05499 DEAD\/DEAH box helicase\tK11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]" }, { "name":"BN406_01033 rnr; exoribonuclease II protein\tK12573 rnr; ribonuclease R [EC:3.1.13.1]" }, { "name":"BN406_00061 DEAD\/DEAH box helicase\tK05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]" }, { "name":"BN406_02168 recQ; ATP-dependent DNA helicase recQ\tK03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]" }, { "name":"BN406_03134 rho; Transcription termination factor Rho\tK03628 rho; transcription termination factor Rho" }, { "name":"BN406_01016 hypothetical protein\tK12574 rnj; ribonuclease J [EC:3.1.-.-]" }, { "name":"BN406_03312 dnaK; Chaperone protein DnaK\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"BN406_00448 groL1; 60 kDa chaperonin 1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_00931 groL2; 60 kDa chaperonin 2\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_04188 groL1; 60 kDa chaperonin 1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_04784 groL6; 60 kDa chaperonin 6\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_05019 groL3; 60 kDa chaperonin 3\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_05660 groL5; 60 kDa chaperonin 5\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_01196 hfq; RNA-binding protein Hfq\tK03666 hfq; host factor-I protein" }, { "name":"BN406_00921 ppk; polyphosphate kinase\tK00937 ppk1; polyphosphate kinase [EC:2.7.4.1]" }, { "name":"BN406_00141 hypothetical protein\tK22468 ppk2; polyphosphate kinase [EC:2.7.4.34]" }, { "name":"BN406_04148 polyphosphate kinase 2\tK22468 ppk2; polyphosphate kinase [EC:2.7.4.34]" }, { "name":"BN406_04989 hypothetical protein\tK22468 ppk2; polyphosphate kinase [EC:2.7.4.34]" }, { "name":"BN406_02213 hypothetical protein\tK00970 pcnB; poly(A) polymerase [EC:2.7.7.19]" } ] } ] }, { "name":"09124 Replication and repair", "children":[ { "name":"03030 DNA replication [PATH:smi03030]", "children":[ { "name":"BN406_03141 dnaQ; DNA polymerase III subunit epsilon\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]" }, { "name":"BN406_04940 DNA polymerase III subunit epsilon\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]" }, { "name":"BN406_01023 dnaE1; DNA polymerase III subunit alpha\tK02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]" }, { "name":"BN406_03361 DNA polymerase III subunits gamma and tau\tK02343 dnaX; DNA polymerase III subunit gamma\/tau [EC:2.7.7.7]" }, { "name":"BN406_01338 DNA polymerase III subunit delta'\tK02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]" }, { "name":"BN406_03128 holA; DNA polymerase III subunit delta\tK02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]" }, { "name":"BN406_00891 DNA polymerase III subunit chi\tK02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]" }, { "name":"BN406_03466 dnaN; DNA polymerase III subunit beta\tK02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]" }, { "name":"BN406_00867 dnaB; replicative DNA helicase\tK02314 dnaB; replicative DNA helicase [EC:5.6.2.3]" }, { "name":"BN406_02169 dnaG; DNA primase\tK02316 dnaG; DNA primase [EC:2.7.7.101]" }, { "name":"BN406_01291 ssb; single-stranded DNA-binding protein\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"BN406_00569 rnhA; Ribonuclease H\tK03469 rnhA; ribonuclease HI [EC:3.1.26.4]" }, { "name":"BN406_00493 rnhB; ribonuclease HII\tK03470 rnhB; ribonuclease HII [EC:3.1.26.4]" }, { "name":"BN406_03305 polA; DNA polymerase I\tK02335 polA; DNA polymerase I [EC:2.7.7.7]" }, { "name":"BN406_01987 ligA; NAD-dependent DNA ligase LigA\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]" } ] }, { "name":"03410 Base excision repair [PATH:smi03410]", "children":[ { "name":"BN406_03298 nth; Endonuclease III\tK10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]" }, { "name":"BN406_02782 ung; Uracil-DNA glycosylase\tK03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]" }, { "name":"BN406_03641 uracil-DNA glycosylase\tK03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]" }, { "name":"BN406_05284 3-methyladenine DNA glycosylase\tK03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]" }, { "name":"BN406_03497 fpg; formamidopyrimidine-DNA glycosylase\tK10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]" }, { "name":"BN406_02494 DNA-3-methyladenine glycosidase II protein\tK01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]" }, { "name":"BN406_00439 tag; DNA-3-methyladenine glycosylase I protein\tK01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]" }, { "name":"BN406_00690 hypothetical protein\tK21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]" }, { "name":"BN406_05416 phage SPO1 DNA polymerase-like protein\tK21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]" }, { "name":"BN406_01250 xthA2; exodeoxyribonuclease III protein\tK01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]" }, { "name":"BN406_01400 xthA1; exodeoxyribonuclease III protein\tK01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]" }, { "name":"BN406_03001 xthA3; exodeoxyribonuclease III protein\tK01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]" }, { "name":"BN406_05303 exodeoxyribonuclease III Xth\tK01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]" }, { "name":"BN406_03305 polA; DNA polymerase I\tK02335 polA; DNA polymerase I [EC:2.7.7.7]" }, { "name":"BN406_01462 recJ; single-stranded-DNA-specific exonuclease\tK07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]" }, { "name":"BN406_01987 ligA; NAD-dependent DNA ligase LigA\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]" } ] }, { "name":"03420 Nucleotide excision repair [PATH:smi03420]", "children":[ { "name":"BN406_01403 mfd; transcription-repair coupling factor\tK03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]" }, { "name":"BN406_01290 uvrA; UvrABC system protein A\tK03701 uvrA; excinuclease ABC subunit A" }, { "name":"BN406_01630 uvrB; UvrABC system protein B\tK03702 uvrB; excinuclease ABC subunit B" }, { "name":"BN406_00906 uvrC; excinuclease ABC subunit C\tK03703 uvrC; excinuclease ABC subunit C" }, { "name":"BN406_01966 uvrD1; DNA helicase II protein\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]" }, { "name":"BN406_01967 uvrD1; DNA helicase II protein\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]" }, { "name":"BN406_03541 uvrD2; UvrD2 DNA helicase\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]" }, { "name":"BN406_03305 polA; DNA polymerase I\tK02335 polA; DNA polymerase I [EC:2.7.7.7]" }, { "name":"BN406_01987 ligA; NAD-dependent DNA ligase LigA\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]" } ] }, { "name":"03430 Mismatch repair [PATH:smi03430]", "children":[ { "name":"BN406_00028 mutS; DNA mismatch repair protein MutS\tK03555 mutS; DNA mismatch repair protein MutS" }, { "name":"BN406_00470 mutL; DNA mismatch repair protein mutL\tK03572 mutL; DNA mismatch repair protein MutL" }, { "name":"BN406_01966 uvrD1; DNA helicase II protein\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]" }, { "name":"BN406_01967 uvrD1; DNA helicase II protein\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]" }, { "name":"BN406_03541 uvrD2; UvrD2 DNA helicase\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]" }, { "name":"BN406_03429 xseA; exodeoxyribonuclease VII large subunit\tK03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]" }, { "name":"BN406_00537 exodeoxyribonuclease VII small subunit\tK03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]" }, { "name":"BN406_01462 recJ; single-stranded-DNA-specific exonuclease\tK07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]" }, { "name":"BN406_01291 ssb; single-stranded DNA-binding protein\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"BN406_01023 dnaE1; DNA polymerase III subunit alpha\tK02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]" }, { "name":"BN406_03466 dnaN; DNA polymerase III subunit beta\tK02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]" }, { "name":"BN406_03361 DNA polymerase III subunits gamma and tau\tK02343 dnaX; DNA polymerase III subunit gamma\/tau [EC:2.7.7.7]" }, { "name":"BN406_03128 holA; DNA polymerase III subunit delta\tK02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]" }, { "name":"BN406_01338 DNA polymerase III subunit delta'\tK02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]" }, { "name":"BN406_03141 dnaQ; DNA polymerase III subunit epsilon\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]" }, { "name":"BN406_04940 DNA polymerase III subunit epsilon\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]" }, { "name":"BN406_00891 DNA polymerase III subunit chi\tK02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]" }, { "name":"BN406_01987 ligA; NAD-dependent DNA ligase LigA\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]" } ] }, { "name":"03440 Homologous recombination [PATH:smi03440]", "children":[ { "name":"BN406_01462 recJ; single-stranded-DNA-specific exonuclease\tK07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]" }, { "name":"BN406_01291 ssb; single-stranded DNA-binding protein\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"BN406_03318 recF; DNA replication and repair protein RecF\tK03629 recF; DNA replication and repair protein RecF" }, { "name":"BN406_00823 recO; DNA repair protein RecO\tK03584 recO; DNA repair protein RecO (recombination protein O)" }, { "name":"BN406_03364 recR; recombination protein RecR\tK06187 recR; recombination protein RecR" }, { "name":"BN406_01532 recA; recombinase A\tK03553 recA; recombination protein RecA" }, { "name":"BN406_03305 polA; DNA polymerase I\tK02335 polA; DNA polymerase I [EC:2.7.7.7]" }, { "name":"BN406_02607 ruvA; Holliday junction DNA helicase RuvA\tK03550 ruvA; holliday junction DNA helicase RuvA" }, { "name":"BN406_02606 ruvB; Holliday junction ATP-dependent DNA helicase RuvB\tK03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]" }, { "name":"BN406_02608 ruvC; Holliday junction resolvase\tK01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]" }, { "name":"BN406_01405 recG; ATP-dependent DNA helicase RecG\tK03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]" }, { "name":"BN406_01023 dnaE1; DNA polymerase III subunit alpha\tK02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]" }, { "name":"BN406_03466 dnaN; DNA polymerase III subunit beta\tK02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]" }, { "name":"BN406_03361 DNA polymerase III subunits gamma and tau\tK02343 dnaX; DNA polymerase III subunit gamma\/tau [EC:2.7.7.7]" }, { "name":"BN406_03128 holA; DNA polymerase III subunit delta\tK02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]" }, { "name":"BN406_01338 DNA polymerase III subunit delta'\tK02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]" }, { "name":"BN406_03141 dnaQ; DNA polymerase III subunit epsilon\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]" }, { "name":"BN406_04940 DNA polymerase III subunit epsilon\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]" }, { "name":"BN406_00891 DNA polymerase III subunit chi\tK02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]" }, { "name":"BN406_02895 priA; Primosomal protein N'\tK04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]" } ] }, { "name":"03450 Non-homologous end-joining [PATH:smi03450]", "children":[ { "name":"BN406_03947 putative DNA repair protein Avi_8016\tK10979 ku; DNA end-binding protein Ku" }, { "name":"BN406_05306 putative DNA repair protein BRADO5824\tK10979 ku; DNA end-binding protein Ku" }, { "name":"BN406_05446 putative DNA repair protein Msil_1735\tK10979 ku; DNA end-binding protein Ku" }, { "name":"BN406_05447 putative DNA repair protein RSKD131_1858\tK10979 ku; DNA end-binding protein Ku" }, { "name":"BN406_00784 DNA polymerase LigD ligase region\tK01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]" }, { "name":"BN406_01776 DNA polymerase LigD ligase region\tK01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]" }, { "name":"BN406_02600 hypothetical protein\tK01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]" }, { "name":"BN406_03940 hypothetical protein\tK01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]" }, { "name":"BN406_03945 ATP-dependent DNA ligase\tK01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]" }, { "name":"BN406_05469 hypothetical protein\tK01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]" }, { "name":"BN406_05994 putative ATP-dependent DNA ligase protein\tK01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]" } ] }, { "name":"03460 Fanconi anemia pathway" } ] }, { "name":"09126 Chromosome", "children":[ { "name":"03082 ATP-dependent chromatin remodeling" }, { "name":"03083 Polycomb repressive complex" } ] }, { "name":"09125 Information processing in viruses", "children":[ { "name":"03230 Viral genome structure" }, { "name":"03240 Viral replication" }, { "name":"03250 Viral life cycle - HIV-1" }, { "name":"03260 Virion - Human immunodeficiency virus" }, { "name":"03271 Virion - Rotavirus" }, { "name":"03262 Virion - Coronavirus" }, { "name":"03261 Virion - Influenza virus" }, { "name":"03263 Virion - Enterovirus" }, { "name":"03264 Virion - Flavivirus and Alphavirus" }, { "name":"03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus" }, { "name":"03273 Virion - Lassa virus and SFTS virus" }, { "name":"03272 Virion - Hepatitis viruses" }, { "name":"03266 Virion - Herpesvirus" }, { "name":"03268 Virion - Orthopoxvirus" }, { "name":"03267 Virion - Adenovirus" }, { "name":"03259 Virion - Bacteriophages T4 and T7" }, { "name":"03258 Virion - Bacteriophage lambda" } ] } ] }, { "name":"09130 Environmental Information Processing", "children":[ { "name":"09131 Membrane transport", "children":[ { "name":"02010 ABC transporters [PATH:smi02010]", "children":[ { "name":"BN406_03806 sbp; Sulfate-binding protein\tK02048 cysP; sulfate\/thiosulfate transport system substrate-binding protein" }, { "name":"BN406_05940 sbp; Sulfate-binding protein\tK23163 sbp; sulfate\/thiosulfate transport system substrate-binding protein" }, { "name":"BN406_05941 cysT; putative sulfate transport system permease protein cysT\tK02046 cysU; sulfate\/thiosulfate transport system permease protein" }, { "name":"BN406_05942 cysW; Sulfate transport system permease protein CysW\tK02047 cysW; sulfate\/thiosulfate transport system permease protein" }, { "name":"BN406_03807 cysA1; Sulfate\/thiosulfate import ATP-binding protein CysA 1\tK02045 cysA; sulfate\/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]" }, { "name":"BN406_05943 cysA2; Sulfate\/thiosulfate import ATP-binding protein CysA 2\tK02045 cysA; sulfate\/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]" }, { "name":"BN406_04055 nrtA; Nitrate transport protein NrtA\tK15576 nrtA; nitrate\/nitrite transport system substrate-binding protein" }, { "name":"BN406_04054 nrtB; Nitrate transport permease protein nrtB\tK15577 nrtB; nitrate\/nitrite transport system permease protein" }, { "name":"BN406_04053 nasD; Nitrate transport protein NasD\tK15578 nrtC; nitrate\/nitrite transport system ATP-binding protein [EC:7.3.2.4]" }, { "name":"BN406_05699 taurine ABC transporter periplasmic binding protein\tK15551 tauA; taurine transport system substrate-binding protein" }, { "name":"BN406_05697 tauC; Taurine transport system permease protein tauC\tK15552 tauC; taurine transport system permease protein" }, { "name":"BN406_05698 tauB; Taurine import ATP-binding protein TauB\tK10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]" }, { "name":"BN406_02783 modA; molybdate ABC transporter periplasmic molybdate-binding protein\tK02020 modA; molybdate transport system substrate-binding protein" }, { "name":"BN406_02784 modB; Molybdenum transport system permease protein modB\tK02018 modB; molybdate transport system permease protein" }, { "name":"BN406_02785 modC; Molybdenum import ATP-binding protein ModC\tK02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]" }, { "name":"BN406_00354 iron binding protein\tK02012 afuA; iron(III) transport system substrate-binding protein" }, { "name":"BN406_01875 afuA; IRON-binding periplasmic protein\tK02012 afuA; iron(III) transport system substrate-binding protein" }, { "name":"BN406_03908 extracellular solute-binding protein\tK02012 afuA; iron(III) transport system substrate-binding protein" }, { "name":"BN406_05268 iron ABC transporter substrate-binding protein precursor\tK02012 afuA; iron(III) transport system substrate-binding protein" }, { "name":"BN406_05684 iron uptake ABC transporter substrate-binding protein precursor\tK02012 afuA; iron(III) transport system substrate-binding protein" }, { "name":"BN406_06307 putative protein HI_0131\tK02012 afuA; iron(III) transport system substrate-binding protein" }, { "name":"BN406_06500 ABC transporter periplasmic solute-binding protein\tK02012 afuA; iron(III) transport system substrate-binding protein" }, { "name":"BN406_06501 ABC transporter periplasmic solute-binding protein\tK02012 afuA; iron(III) transport system substrate-binding protein" }, { "name":"BN406_00345 ABC transporter\tK02011 afuB; iron(III) transport system permease protein" }, { "name":"BN406_01874 ABC transporter\tK02011 afuB; iron(III) transport system permease protein" }, { "name":"BN406_03909 ABC transporter\tK02011 afuB; iron(III) transport system permease protein" }, { "name":"BN406_05682 iron uptake ABC transporter permease\tK02011 afuB; iron(III) transport system permease protein" }, { "name":"BN406_06308 ABC transporter\tK02011 afuB; iron(III) transport system permease protein" }, { "name":"BN406_06503 ABC transporter\tK02011 afuB; iron(III) transport system permease protein" }, { "name":"BN406_01259 Fe(3+)-transporting ATPase\tK02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]" }, { "name":"BN406_01873 potA1; Spermidine\/putrescine import ATP-binding protein PotA\tK02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]" }, { "name":"BN406_03910 ugpC3; sn-glycerol-3-phosphate import ATP-binding protein UgpC 3\tK02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]" }, { "name":"BN406_05683 fbpC2; Fe(3+) ions import ATP-binding protein FbpC 2\tK02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]" }, { "name":"BN406_06309 fbpC1; Fe(3+) ions import ATP-binding protein FbpC 1\tK02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]" }, { "name":"BN406_06502 ugpC3; sn-glycerol-3-phosphate import ATP-binding protein UgpC 3\tK02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]" }, { "name":"BN406_03053 thiB; Thiamine-binding periplasmic protein\tK02064 thiB; thiamine transport system substrate-binding protein" }, { "name":"BN406_03054 thiP; Thiamine transport system permease protein thiP\tK02063 thiP; thiamine transport system permease protein" }, { "name":"BN406_03055 thiQ; Thiamine import ATP-binding protein ThiQ\tK02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]" }, { "name":"BN406_00514 putrescine-binding periplasmic protein\tK11069 potD; spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_02068 periplasmic binding ABC transporter protein\tK11069 potD; spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_06381 family 1 extracellular solute-binding protein\tK11069 potD; spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_06734 unnamed protein product\tK11069 potD; spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_06738 ABC transporter substrate-binding protein\tK11069 potD; spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_06759 putative secreted protein\tK11069 potD; spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_02070 ABC transporter permease\tK11070 potC; spermidine\/putrescine transport system permease protein" }, { "name":"BN406_06383 spermidine\/putrescine ABC transporter permease\tK11070 potC; spermidine\/putrescine transport system permease protein" }, { "name":"BN406_06735 putative membrane protein\tK11070 potC; spermidine\/putrescine transport system permease protein" }, { "name":"BN406_06740 putative membrane protein\tK11070 potC; spermidine\/putrescine transport system permease protein" }, { "name":"BN406_06761 putative membrane protein\tK11070 potC; spermidine\/putrescine transport system permease protein" }, { "name":"BN406_02069 ABC transporter permease\tK11071 potB; spermidine\/putrescine transport system permease protein" }, { "name":"BN406_06382 spermidine\/putrescine ABC transporter permease\tK11071 potB; spermidine\/putrescine transport system permease protein" }, { "name":"BN406_02067 potA5; Spermidine\/putrescine import ATP-binding protein PotA\tK11072 potA; spermidine\/putrescine transport system ATP-binding protein [EC:7.6.2.11]" }, { "name":"BN406_06384 potA3; Spermidine\/putrescine import ATP-binding protein PotA\tK11072 potA; spermidine\/putrescine transport system ATP-binding protein [EC:7.6.2.11]" }, { "name":"BN406_06736 potA3; Spermidine\/putrescine import ATP-binding protein PotA\tK11072 potA; spermidine\/putrescine transport system ATP-binding protein [EC:7.6.2.11]" }, { "name":"BN406_06739 potA5; Spermidine\/putrescine import ATP-binding protein PotA\tK11072 potA; spermidine\/putrescine transport system ATP-binding protein [EC:7.6.2.11]" }, { "name":"BN406_06760 potA7; Spermidine\/putrescine import ATP-binding protein PotA\tK11072 potA; spermidine\/putrescine transport system ATP-binding protein [EC:7.6.2.11]" }, { "name":"BN406_00339 potF; Putrescine-binding periplasmic protein\tK11073 potF; putrescine transport system substrate-binding protein" }, { "name":"BN406_00342 potI; Putrescine transport system permease protein PotI\tK11074 potI; putrescine transport system permease protein" }, { "name":"BN406_00341 potH; Putrescine transport system permease protein PotH\tK11075 potH; putrescine transport system permease protein" }, { "name":"BN406_00340 potG; Putrescine transport ATP-binding protein PotG\tK11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]" }, { "name":"BN406_00693 periplasmic binding transmembrane protein\tK02002 proX; glycine betaine\/proline transport system substrate-binding protein" }, { "name":"BN406_01695 glycine betaine ABC transporter periplasmic protein\tK02002 proX; glycine betaine\/proline transport system substrate-binding protein" }, { "name":"BN406_01885 amino acid-binding periplasmic protein\tK02002 proX; glycine betaine\/proline transport system substrate-binding protein" }, { "name":"BN406_02247 opuC; glycine betaine-binding ABC transporter protein\tK02002 proX; glycine betaine\/proline transport system substrate-binding protein" }, { "name":"BN406_02557 hisX; histidine-binding periplasmic signal peptide protein\tK02002 proX; glycine betaine\/proline transport system substrate-binding protein" }, { "name":"BN406_04687 glycine betaine ABC transporter periplasmic protein\tK02002 proX; glycine betaine\/proline transport system substrate-binding protein" }, { "name":"BN406_05654 amino acid uptake ABC transporter substrate-binding protein precursor\tK02002 proX; glycine betaine\/proline transport system substrate-binding protein" }, { "name":"BN406_06262 glycine-betaine-binding protein\tK02002 proX; glycine betaine\/proline transport system substrate-binding protein" }, { "name":"BN406_00694 proW; Glycine betaine\/L-proline transport system permease protein proW\tK02001 proW; glycine betaine\/proline transport system permease protein" }, { "name":"BN406_02248 opuAB1; Glycine betaine transport system permease protein OpuAB\tK02001 proW; glycine betaine\/proline transport system permease protein" }, { "name":"BN406_02558 opuAB3; Glycine betaine transport system permease protein OpuAB\tK02001 proW; glycine betaine\/proline transport system permease protein" }, { "name":"BN406_01696 opuAA1; Glycine betaine transport ATP-binding protein OpuAA\tK02000 proV; glycine betaine\/proline transport system ATP-binding protein [EC:7.6.2.9]" }, { "name":"BN406_02249 proV; Glycine betaine\/L-proline transport ATP-binding protein ProV\tK02000 proV; glycine betaine\/proline transport system ATP-binding protein [EC:7.6.2.9]" }, { "name":"BN406_02559 opuAA3; Glycine betaine transport ATP-binding protein OpuAA\tK02000 proV; glycine betaine\/proline transport system ATP-binding protein [EC:7.6.2.9]" }, { "name":"BN406_04535 ABC transporter\tK05845 opuC; osmoprotectant transport system substrate-binding protein" }, { "name":"BN406_05847 osmF; Putative osmoprotectant uptake system substrate-binding protein osmF\tK05845 opuC; osmoprotectant transport system substrate-binding protein" }, { "name":"BN406_04536 ABC transporter permease\tK05846 opuBD; osmoprotectant transport system permease protein" }, { "name":"BN406_04538 inner-membrane permease\tK05846 opuBD; osmoprotectant transport system permease protein" }, { "name":"BN406_05844 choline uptake ABC transporter permease\tK05846 opuBD; osmoprotectant transport system permease protein" }, { "name":"BN406_05846 ABC transporter\tK05846 opuBD; osmoprotectant transport system permease protein" }, { "name":"BN406_04537 opuCA; Carnitine transport ATP-binding protein OpuCA\tK05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]" }, { "name":"BN406_05845 yehX; Putative osmoprotectant uptake system ATP-binding protein YehX\tK05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]" }, { "name":"BN406_02291 smoK1; ATP-binding transport protein SmoK\tK10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_03246 malK; Maltose\/maltodextrin import ATP-binding protein MalK\tK10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_03324 smoK3; ATP-binding transport protein SmoK\tK10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_05165 lacK3; Lactose transport ATP-binding protein LacK\tK10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_05405 malK1; Maltose\/maltodextrin import ATP-binding protein MalK\tK10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_05573 malK3; Maltose\/maltodextrin import ATP-binding protein MalK\tK10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_05620 lacK5; Lactose transport ATP-binding protein LacK\tK10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_05839 malK5; Maltose\/maltodextrin import ATP-binding protein MalK\tK10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_06344 aglK; Alpha-glucoside transport ATP-binding protein AglK\tK10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_01654 ugpC1; sn-glycerol-3-phosphate import ATP-binding protein UgpC\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_02060 ABC transporter ATP-binding protein\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_02061 ABC transporter ATP-binding protein\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_02362 putative ABC transporter ATP-binding protein y4oS\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_02917 ugpC3; sn-glycerol-3-phosphate import ATP-binding protein UgpC\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_03094 ugpC5; sn-glycerol-3-phosphate import ATP-binding protein UgpC\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_04174 putative ABC transporter ATP-binding protein y4oS\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_04463 putative ABC transporter ATP-binding protein y4oS\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_04464 yurJ; putative ABC transporter ATP-binding protein YurJ\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_05331 putative ABC transporter ATP-binding protein y4oS\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_05633 lacK7; Lactose transport ATP-binding protein LacK\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_05932 putative ABC transporter ATP-binding protein y4oS\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_05965 ugpC1; sn-glycerol-3-phosphate import ATP-binding protein UgpC\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_06431 putative ABC transporter ATP-binding protein y4oS\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_06644 putative ABC transporter ATP-binding protein y4oS\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_02920 putative periplasmic binding ABC transporter protein\tK10117 msmE; raffinose\/stachyose\/melibiose transport system substrate-binding protein" }, { "name":"BN406_03328 periplasmic binding (signal peptide) ABC transporter protein\tK10117 msmE; raffinose\/stachyose\/melibiose transport system substrate-binding protein" }, { "name":"BN406_02919 transport system permease ABC transporter protein\tK10118 msmF; raffinose\/stachyose\/melibiose transport system permease protein" }, { "name":"BN406_03327 ABC transporter permease\tK10118 msmF; raffinose\/stachyose\/melibiose transport system permease protein" }, { "name":"BN406_02918 transport system permease ABC transporter protein\tK10119 msmG; raffinose\/stachyose\/melibiose transport system permease protein" }, { "name":"BN406_03326 ABC transporter permease\tK10119 msmG; raffinose\/stachyose\/melibiose transport system permease protein" }, { "name":"BN406_05135 lacE; Lactose-binding protein\tK10188 lacE; lactose\/L-arabinose transport system substrate-binding protein" }, { "name":"BN406_05134 lacF; Lactose transport system permease protein lacF\tK10189 lacF; lactose\/L-arabinose transport system permease protein" }, { "name":"BN406_05133 lacG; Lactose transport system permease protein lacG\tK10190 lacG; lactose\/L-arabinose transport system permease protein" }, { "name":"BN406_05131 lacK1; Lactose transport ATP-binding protein LacK\tK10191 lacK; lactose\/L-arabinose transport system ATP-binding protein" }, { "name":"BN406_02294 smoE; sorbitol-binding periplasmic protein\tK10227 smoE; polyol transport system substrate-binding protein" }, { "name":"BN406_02293 ABC transporter\tK10228 smoF; polyol transport system permease protein" }, { "name":"BN406_02292 smoG; sorbitol\/mannitol transport inner membrane protein\tK10229 smoG; polyol transport system permease protein" }, { "name":"BN406_00311 aglE; Alpha-glucosides-binding periplasmic protein AglE\tK10232 aglE; alpha-glucoside transport system substrate-binding protein" }, { "name":"BN406_00312 aglF; Alpha-glucoside transport system permease protein AglF\tK10233 aglF; alpha-glucoside transport system permease protein" }, { "name":"BN406_00313 aglG; Alpha-glucoside transport system permease protein AglG\tK10234 aglG; alpha-glucoside transport system permease protein" }, { "name":"BN406_00315 aglK; Alpha-glucoside transport ATP-binding protein AglK\tK10235 aglK; alpha-glucoside transport system ATP-binding protein" }, { "name":"BN406_05404 putative ABC transporter-binding protein DR_1438\tK10236 thuE; trehalose\/maltose transport system substrate-binding protein" }, { "name":"BN406_06347 putative ABC transporter-binding protein DR_1438\tK10236 thuE; trehalose\/maltose transport system substrate-binding protein" }, { "name":"BN406_05406 sugar uptake ABC transporter permease\tK10237 thuF; trehalose\/maltose transport system permease protein" }, { "name":"BN406_06346 ABC transporter\tK10237 thuF; trehalose\/maltose transport system permease protein" }, { "name":"BN406_05407 sugar uptake ABC transporter permease\tK10238 thuG; trehalose\/maltose transport system permease protein" }, { "name":"BN406_06345 thuG; trehalosemaltose transporter permease\tK10238 thuG; trehalose\/maltose transport system permease protein" }, { "name":"BN406_05485 chvE; Multiple sugar-binding periplasmic receptor ChvE\tK10546 chvE; putative multiple sugar transport system substrate-binding protein" }, { "name":"BN406_05487 gguB; sugar uptake ABC transporter permease\tK10547 gguB; putative multiple sugar transport system permease protein" }, { "name":"BN406_05486 araG1; L-arabinose transport ATP-binding protein AraG\tK10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_01564 hypothetical protein\tK02067 mlaD; phospholipid\/cholesterol\/gamma-HCH transport system substrate-binding protein" }, { "name":"BN406_01566 hypothetical protein\tK02066 mlaE; phospholipid\/cholesterol\/gamma-HCH transport system permease protein" }, { "name":"BN406_01565 ABC transporter ATP-binding protein\tK02065 mlaF; phospholipid\/cholesterol\/gamma-HCH transport system ATP-binding protein" }, { "name":"BN406_01419 Purine-binding protein BAB2_0673\tK07335 bmpA; basic membrane protein A and related proteins" }, { "name":"BN406_03339 lipoprotein precursor\tK07335 bmpA; basic membrane protein A and related proteins" }, { "name":"BN406_03521 hypothetical protein\tK07335 bmpA; basic membrane protein A and related proteins" }, { "name":"BN406_03644 basic membrane lipoprotein\tK07335 bmpA; basic membrane protein A and related proteins" }, { "name":"BN406_04557 hypothetical protein\tK07335 bmpA; basic membrane protein A and related proteins" }, { "name":"BN406_06531 basic membrane lipoprotein\tK07335 bmpA; basic membrane protein A and related proteins" }, { "name":"BN406_01421 transport system permease ABC transporter protein\tK23535 nupB; general nucleoside transport system permease protein" }, { "name":"BN406_03260 transport system permease ABC transporter protein\tK23535 nupB; general nucleoside transport system permease protein" }, { "name":"BN406_03518 ABC transporter permease\tK23535 nupB; general nucleoside transport system permease protein" }, { "name":"BN406_03646 putative ABC transporter, permease\tK23535 nupB; general nucleoside transport system permease protein" }, { "name":"BN406_04559 ABC transporter integral membrane protein\tK23535 nupB; general nucleoside transport system permease protein" }, { "name":"BN406_06532 ABC transporter\tK23535 nupB; general nucleoside transport system permease protein" }, { "name":"BN406_01420 transport system permease ABC transporter protein\tK23536 nupC; general nucleoside transport system permease protein" }, { "name":"BN406_03261 transport system permease ABC transporter protein\tK23536 nupC; general nucleoside transport system permease protein" }, { "name":"BN406_03517 ABC transporter integral membrane protein\tK23536 nupC; general nucleoside transport system permease protein" }, { "name":"BN406_03647 inner-membrane translocator\tK23536 nupC; general nucleoside transport system permease protein" }, { "name":"BN406_04560 ABC transporter permease\tK23536 nupC; general nucleoside transport system permease protein" }, { "name":"BN406_06533 sugar ABC transporter permease\tK23536 nupC; general nucleoside transport system permease protein" }, { "name":"BN406_01422 ABC transporter ATP-binding protein\tK23537 nupA; general nucleoside transport system ATP-binding protein" }, { "name":"BN406_03259 yufO; putative ABC transporter ATP-binding protein YufO\tK23537 nupA; general nucleoside transport system ATP-binding protein" }, { "name":"BN406_03519 yufO; putative ABC transporter ATP-binding protein YufO\tK23537 nupA; general nucleoside transport system ATP-binding protein" }, { "name":"BN406_03645 monosaccharide-transporting ATPase\tK23537 nupA; general nucleoside transport system ATP-binding protein" }, { "name":"BN406_04558 monosaccharide-transporting ATPase\tK23537 nupA; general nucleoside transport system ATP-binding protein" }, { "name":"BN406_06534 yufO; putative ABC transporter ATP-binding protein YufO\tK23537 nupA; general nucleoside transport system ATP-binding protein" }, { "name":"BN406_01657 periplasmic binding ABC transporter signal peptide protein\tK17315 gtsA; glucose\/mannose transport system substrate-binding protein" }, { "name":"BN406_03097 putative sugar-binding periplasmic protein\tK17315 gtsA; glucose\/mannose transport system substrate-binding protein" }, { "name":"BN406_01656 transport system permease ABC transporter protein\tK17316 gtsB; glucose\/mannose transport system permease protein" }, { "name":"BN406_03096 transport system permease ABC transporter protein\tK17316 gtsB; glucose\/mannose transport system permease protein" }, { "name":"BN406_01655 ABC transporter\tK17317 gtsC; glucose\/mannose transport system permease protein" }, { "name":"BN406_03095 transport system permease ABC transporter protein\tK17317 gtsC; glucose\/mannose transport system permease protein" }, { "name":"BN406_00370 periplasmic binding protein\/LacI transcriptional regulator\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_02381 periplasmic binding ABC transporter protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_02393 putative periplasmic binding protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_02414 periplasmic binding ABC transporter protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_02996 periplasmic binding ABC transporter protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_03155 periplasmic binding protein\/LacI transcriptional regulator\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_04515 ABC transporter substrate-binding protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_04872 ABC transporter substrate-binding protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_04931 periplasmic binding protein\/LacI transcriptional regulator\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_04972 putative ABC transporter component\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_05115 sugar ABC transporter substrate-binding protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_05271 sugar uptake ABC transporter substrate-binding protein precursor\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_05321 sugar uptake ABC transporter substrate-binding protein precursor\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_05523 ABC transporter substrate-binding protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_05612 putative sugar uptake ABC transporter periplasmic solute-binding protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_05709 sugar uptake ABC transporter substrate-binding protein precursor\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_06179 putative ABC transporter periplasmic sugar-binding protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_06660 putative secreted protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_06674 putative secreted protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_00371 monosaccharide-transporting ATPase\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_02379 ABC transporter permease\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_02391 rbsC; Ribose transport system permease protein rbsC\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_02412 ABC transporter\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_02997 transport system permease ABC transporter protein\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_03157 sugar ABC transporter permease\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_04038 inner-membrane translocator\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_04039 inner-membrane translocator\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_04512 ABC transporter permease\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_04514 ABC transporter permease\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_04869 ABC transporter permease\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_04870 ABC transporter permease\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_04932 ABC transporter permease\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_04974 ABC transporter\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_04975 ABC transporter\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_05117 sugar ABC transporter permease ABC transporter\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_05118 sugar ABC transporter permease ABC transporter\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_05272 sugar uptake ABC transporter permease\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_05525 ABC transporter permease\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_05614 sugar uptake ABC transporter permease\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_05711 rbsC; Ribose transport system permease protein rbsC\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_06181 probabable sugar ABC transporter\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_06662 putative membrane protein\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_06673 rbsC; Ribose transport system permease protein rbsC\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_02392 rbsA1; Ribose import ATP-binding protein RbsA 1\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_02413 Putative ribose\/galactose\/methyl galactoside import ATP-binding protein 1\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_03156 rbsA2; Ribose import ATP-binding protein RbsA 2\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_04037 rbsA1; Ribose import ATP-binding protein RbsA 1\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_04513 ABC transporter ATP-binding protein\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_04871 Putative ribose\/galactose\/methyl galactoside import ATP-binding protein\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_04933 rbsA1; Ribose import ATP-binding protein RbsA 1\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_04973 monosaccharide-transporting ATPase\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_05116 Putative ribose\/galactose\/methyl galactoside import ATP-binding protein 2\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_05273 rbsA3; Ribose import ATP-binding protein RbsA 3\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_05319 Putative ribose\/galactose\/methyl galactoside import ATP-binding protein 2\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_05524 rbsA3; Ribose import ATP-binding protein RbsA 3\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_05710 rbsA5; Ribose import ATP-binding protein RbsA\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_06180 rbsA2; Ribose import ATP-binding protein RbsA 2\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_06661 rbsA; Ribose import ATP-binding protein RbsA\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_06675 Putative ribose\/galactose\/methyl galactoside import ATP-binding protein 1\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_06175 araF; L-arabinose-binding periplasmic protein\tK10537 araF; L-arabinose transport system substrate-binding protein" }, { "name":"BN406_06177 araH; L-arabinose transport system permease protein AraH\tK10538 araH; L-arabinose transport system permease protein" }, { "name":"BN406_06176 araG3; Arabinose import ATP-binding protein AraG\tK10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]" }, { "name":"BN406_05638 ytfQ; ABC transporter periplasmic-binding protein ytfQ\tK23508 ytfQ; galactofuranose transport system substrate-binding protein" }, { "name":"BN406_05740 periplasmic binding protein\/LacI transcriptional regulator\tK23508 ytfQ; galactofuranose transport system substrate-binding protein" }, { "name":"BN406_05635 yjfF; Inner membrane ABC transporter permease protein yjfF\tK23509 ytfT; galactofuranose transport system permease protein" }, { "name":"BN406_05636 ytfT; Inner membrane ABC transporter permease protein ytfT\tK23509 ytfT; galactofuranose transport system permease protein" }, { "name":"BN406_05742 sugar uptake ABC transporter permease\tK23509 ytfT; galactofuranose transport system permease protein" }, { "name":"BN406_05743 ABC transporter\tK23509 ytfT; galactofuranose transport system permease protein" }, { "name":"BN406_05637 ytfR1; putative ABC transporter ATP-binding protein YtfR\tK10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]" }, { "name":"BN406_05741 ytfR3; putative ABC transporter ATP-binding protein YtfR\tK10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]" }, { "name":"BN406_05477 xylF; D-xylose-binding periplasmic protein\tK10543 xylF; D-xylose transport system substrate-binding protein" }, { "name":"BN406_05476 ABC transporter\tK10544 xylH; D-xylose transport system permease protein" }, { "name":"BN406_05475 rbsA1; Ribose import ATP-binding protein RbsA 1\tK10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]" }, { "name":"BN406_00124 periplasmic binding ABC transporter protein\tK10552 frcB; fructose transport system substrate-binding protein" }, { "name":"BN406_00125 ABC transporter permease\tK10553 frcC; fructose transport system permease protein" }, { "name":"BN406_00126 ABC transporter ATP-binding protein\tK10554 frcA; fructose transport system ATP-binding protein" }, { "name":"BN406_00246 periplasmic binding ABC transporter protein\tK10559 rhaS; rhamnose transport system substrate-binding protein" }, { "name":"BN406_00248 rhaP; Rhamnose transport system permease protein\tK10560 rhaP; rhamnose transport system permease protein" }, { "name":"BN406_00249 ABC transporter\tK10561 rhaQ; rhamnose transport system permease protein" }, { "name":"BN406_00247 rbsA1; Ribose import ATP-binding protein RbsA 1\tK10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_06323 periplasmic binding protein\/LacI transcriptional regulator\tK17202 eryG; erythritol transport system substrate-binding protein" }, { "name":"BN406_06320 sugar ABC transporter permease\tK17203 eryF; erythritol transport system permease protein" }, { "name":"BN406_06321 rbsA7; Ribose import ATP-binding protein RbsA\tK17204 eryE; erythritol transport system ATP-binding protein" }, { "name":"BN406_05280 mocB1; Putative rhizopine-binding protein\tK17213 K17213; inositol transport system substrate-binding protein" }, { "name":"BN406_06585 mocB3; Putative rhizopine-binding protein\tK17213 K17213; inositol transport system substrate-binding protein" }, { "name":"BN406_06770 mocB; Putative rhizopine-binding protein\tK17213 K17213; inositol transport system substrate-binding protein" }, { "name":"BN406_05278 sugar uptake ABC transporter permease\tK17214 K17214; inositol transport system permease protein" }, { "name":"BN406_06771 sugar ABC transporter permease\tK17214 K17214; inositol transport system permease protein" }, { "name":"BN406_05279 Putative ribose\/galactose\/methyl galactoside import ATP-binding protein 2\tK17215 K17215; inositol transport system ATP-binding protein" }, { "name":"BN406_06790 Putative ribose\/galactose\/methyl galactoside import ATP-binding protein 2\tK17215 K17215; inositol transport system ATP-binding protein" }, { "name":"BN406_02877 periplasmic binding ABC transporter protein\tK17321 glpV; glycerol transport system substrate-binding protein" }, { "name":"BN406_02874 transport system permease ABC transporter protein\tK17322 glpP; glycerol transport system permease protein" }, { "name":"BN406_02875 transport system permease ABC transporter protein\tK17323 glpQ; glycerol transport system permease protein" }, { "name":"BN406_02872 ABC transporter ATP-binding protein\tK17324 glpS; glycerol transport system ATP-binding protein" }, { "name":"BN406_02873 ABC transporter ATP-binding protein\tK17325 glpT; glycerol transport system ATP-binding protein" }, { "name":"BN406_06257 ugpB; sn-glycerol-3-phosphate-binding periplasmic protein ugpB\tK05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein" }, { "name":"BN406_06256 ugpA; sn-glycerol-3-phosphate transport system permease protein ugpA\tK05814 ugpA; sn-glycerol 3-phosphate transport system permease protein" }, { "name":"BN406_06255 ugpE; sn-glycerol-3-phosphate transport system permease protein ugpE\tK05815 ugpE; sn-glycerol 3-phosphate transport system permease protein" }, { "name":"BN406_06254 ugpC5; sn-glycerol-3-phosphate import ATP-binding protein UgpC\tK05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]" }, { "name":"BN406_00143 phosphate-binding periplasmic protein\tK02040 pstS; phosphate transport system substrate-binding protein" }, { "name":"BN406_00144 phosphate ABC transporter permease\tK02037 pstC; phosphate transport system permease protein" }, { "name":"BN406_00145 pstA; phosphate ABC transporter permease\tK02038 pstA; phosphate transport system permease protein" }, { "name":"BN406_00146 pstB; Phosphate import ATP-binding protein PstB\tK02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]" }, { "name":"BN406_05816 phoD; phosphate uptake ABC transporter substrate-binding protein precursor\tK02044 phnD; phosphonate transport system substrate-binding protein" }, { "name":"BN406_05817 phoE; phosphate uptake ABC transporter permease\tK02042 phnE; phosphonate transport system permease protein" }, { "name":"BN406_05818 phoT; phosphate uptake ABC transporter permease\tK02042 phnE; phosphonate transport system permease protein" }, { "name":"BN406_05815 phnC; Phosphonates import ATP-binding protein PhnC\tK02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]" }, { "name":"BN406_04014 glutamate\/aspartate periplasmic-binding protein 1\tK10001 gltI; glutamate\/aspartate transport system substrate-binding protein" }, { "name":"BN406_04016 glutamate\/aspartate ABC transporter, permease protein\tK10002 gltK; glutamate\/aspartate transport system permease protein" }, { "name":"BN406_04015 amino ABC transporter permease, 3-TM region, His\/Glu\/Gln\/Arg\/opine family domain-containing protein 1\tK10003 gltJ; glutamate\/aspartate transport system permease protein" }, { "name":"BN406_04017 gltL; Glutamate\/aspartate transport ATP-binding protein GltL\tK10004 gltL; glutamate\/aspartate transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_03687 occT; Octopine-binding periplasmic protein\tK10018 occT; octopine\/nopaline transport system substrate-binding protein" }, { "name":"BN406_03685 occM1; Octopine transport system permease protein occM\tK10019 occM; octopine\/nopaline transport system permease protein" }, { "name":"BN406_03684 occQ; Octopine transport system permease protein occQ\tK10020 occQ; octopine\/nopaline transport system permease protein" }, { "name":"BN406_03686 occP; Octopine permease ATP-binding protein P\tK10021 occP; octopine\/nopaline transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_01210 aapJ1; General L-amino acid-binding periplasmic protein AapJ\tK09969 aapJ; general L-amino acid transport system substrate-binding protein" }, { "name":"BN406_02553 aapJ3; General L-amino acid-binding periplasmic protein AapJ\tK09969 aapJ; general L-amino acid transport system substrate-binding protein" }, { "name":"BN406_01209 aapQ; General L-amino acid transport system permease protein AapQ\tK09970 aapQ; general L-amino acid transport system permease protein" }, { "name":"BN406_01208 aapM; General L-amino acid transport system permease protein AapM\tK09971 aapM; general L-amino acid transport system permease protein" }, { "name":"BN406_01207 aapP1; General L-amino acid transport ATP-binding protein AapP\tK09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_02814 aapP3; General L-amino acid transport ATP-binding protein AapP\tK09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_03074 putative amino-acid ABC transporter-binding protein HI_1080\tK02424 tcyA; L-cystine transport system substrate-binding protein" }, { "name":"BN406_03075 putative amino-acid ABC transporter permease protein HI_0179\tK10009 tcyB; L-cystine transport system permease protein" }, { "name":"BN406_03076 tcyC; L-cystine import ATP-binding protein TcyC\tK10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_03893 ABC transporter substrate-binding protein\tK10022 aotJ; arginine\/ornithine transport system substrate-binding protein" }, { "name":"BN406_03891 occM3; Octopine transport system permease protein occM\tK10023 aotM; arginine\/ornithine transport system permease protein" }, { "name":"BN406_03892 ABC transporter permease\tK10024 aotQ; arginine\/ornithine transport system permease protein" }, { "name":"BN406_03890 aapP1; General L-amino acid transport ATP-binding protein AapP\tK10025 aotP; arginine\/ornithine transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_06403 ABC transporter periplasmic protein\tK23061 lhpP; hydroxyproline transporter system substrate-binding protein" }, { "name":"BN406_06402 amino acid ABC transporter permease\tK23062 lhpM; hydroxyproline transport system permease protein" }, { "name":"BN406_06401 amino acid ABC transporter permease\tK23063 lhpN; hydroxyproline transport system permease protein" }, { "name":"BN406_06400 glnQ; Glutamine transport ATP-binding protein GlnQ\tK23064 lhpO; hydroxyproline transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_00579 Leu\/Ile\/Val-binding protein homolog 3\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_01495 amino acid-binding periplasmic protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_02329 Leu\/Ile\/Val-binding protein homolog 1\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_02433 branched chain amino acid ABC transporter periplasmic protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_02829 periplasmic binding ABC transporter protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_03875 Leu\/Ile\/Val-binding protein homolog 8\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_04051 Leu\/Ile\/Val-binding protein homolog 1\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_05226 Leu\/Ile\/Val-binding protein homolog 6\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_06700 putative secreted protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_06785 branched-chain amino acid ABC transporter substrate-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_00902 ABC transporter\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"BN406_02334 livH; High-affinity branched-chain amino acid transport system permease protein livH\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"BN406_02436 high-affinity branched-chain amino acid transport permease ABC transporter protein\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"BN406_02832 ABC transporter permease\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"BN406_03876 ABC transporter permease\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"BN406_05227 ABC transporter\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"BN406_06702 putative membrane protein\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"BN406_02333 livM; high-affinity branched-chain amino acid transport permease ABC transporter protein\tK01998 livM; branched-chain amino acid transport system permease protein" }, { "name":"BN406_02437 branched chain amino acid ABC transporter permease\tK01998 livM; branched-chain amino acid transport system permease protein" }, { "name":"BN406_02833 ABC transporter\tK01998 livM; branched-chain amino acid transport system permease protein" }, { "name":"BN406_03877 livG; probabable high-affinity branched-chain amino acid transport atp-binding abc transporter protein\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_05228 ABC transporter\tK01998 livM; branched-chain amino acid transport system permease protein" }, { "name":"BN406_06703 putative branched-chain amino acid ABC transporter, permease protein\tK01998 livM; branched-chain amino acid transport system permease protein" }, { "name":"BN406_02332 braF; High-affinity branched-chain amino acid transport ATP-binding protein BraF\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_02434 high-affinity branched-chain amino acid transport ATP-binding ABC transporter protein\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_02830 ABC transporter ATP-binding protein\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_05229 monosaccharide-transporting ATPase\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_06701 putative branched-chain amino acid ABC transporter, ATP-binding protein\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_02331 livF1; High-affinity branched-chain amino acid transport ATP-binding protein LivF\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_02435 livF3; High-affinity branched-chain amino acid transport ATP-binding protein LivF\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_02831 ABC transporter ATP-binding protein\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_03878 livF; High-affinity branched-chain amino acid transport ATP-binding protein LivF\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_05230 Fe(3+)-transporting ATPase\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_06698 hypothetical protein\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_02744 outer membrane lipoprotein transmembrane\tK02073 metQ; D-methionine transport system substrate-binding protein" }, { "name":"BN406_02745 metI; putative D-methionine transport system permease protein metI\tK02072 metI; D-methionine transport system permease protein" }, { "name":"BN406_02746 metN; Methionine import ATP-binding protein MetN\tK02071 metN; D-methionine transport system ATP-binding protein" }, { "name":"BN406_05191 branched-chain amino acid ABC transporter substrate-binding protein precursor\tK11959 urtA; urea transport system substrate-binding protein" }, { "name":"BN406_05192 ABC transporter permease\tK11960 urtB; urea transport system permease protein" }, { "name":"BN406_05193 urea ABC transporter permease UrtC\tK11961 urtC; urea transport system permease protein" }, { "name":"BN406_05194 branched-chain amino acid ABC transporter ATP-binding protein\tK11962 urtD; urea transport system ATP-binding protein" }, { "name":"BN406_05195 ABC transporter ATP-binding protein\tK11963 urtE; urea transport system ATP-binding protein" }, { "name":"BN406_05799 oppA; oligopeptide uptake ABC transporter substrate-binding protein precursor\tK15580 oppA; oligopeptide transport system substrate-binding protein" }, { "name":"BN406_05798 oppB; Oligopeptide transport system permease protein oppB\tK15581 oppB; oligopeptide transport system permease protein" }, { "name":"BN406_05797 ABC transporter\tK15582 oppC; oligopeptide transport system permease protein" }, { "name":"BN406_05796 yejF3; putative ABC transporter ATP-binding protein YejF\tK10823 oppF; oligopeptide transport system ATP-binding protein" }, { "name":"BN406_00356 dppA; Periplasmic dipeptide transport protein\tK12368 dppA; dipeptide transport system substrate-binding protein" }, { "name":"BN406_00357 dppB1; Dipeptide transport system permease protein dppB\tK12369 dppB; dipeptide transport system permease protein" }, { "name":"BN406_00358 dppC1; Dipeptide transport system permease protein dppC\tK12370 dppC; dipeptide transport system permease protein" }, { "name":"BN406_00359 dppD; Dipeptide transport ATP-binding protein DppD\tK12371 dppD; dipeptide transport system ATP-binding protein" }, { "name":"BN406_00360 dppF; Dipeptide transport ATP-binding protein DppF\tK12372 dppF; dipeptide transport system ATP-binding protein" }, { "name":"BN406_03289 putative protein y4wM\tK13893 yejA; microcin C transport system substrate-binding protein" }, { "name":"BN406_03288 yejB; Inner membrane ABC transporter permease protein yejB\tK13894 yejB; microcin C transport system permease protein" }, { "name":"BN406_03287 yejE; Inner membrane ABC transporter permease protein yejE\tK13895 yejE; microcin C transport system permease protein" }, { "name":"BN406_03286 yejF; putative ABC transporter ATP-binding protein YejF\tK13896 yejF; microcin C transport system ATP-binding protein" }, { "name":"BN406_04698 ABC transporter substrate-binding protein\tK25286 fagD; iron-siderophore transport system substrate-binding protein" }, { "name":"BN406_04697 ABC transporter integral membrane protein\tK23186 fepD; iron-siderophore transport system permease protein" }, { "name":"BN406_04696 ABC transporter integral membrane protein\tK23187 fepG; iron-siderophore transport system permease protein" }, { "name":"BN406_04695 yusV; putative siderophore transport system ATP-binding protein YusV\tK23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]" }, { "name":"BN406_01644 znuA; High-affinity zinc uptake system protein znuA\tK09815 znuA; zinc transport system substrate-binding protein" }, { "name":"BN406_01642 znuB; High-affinity zinc uptake system membrane protein znuB\tK09816 znuB; zinc transport system permease protein" }, { "name":"BN406_01643 znuC; Zinc import ATP-binding protein ZnuC\tK09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]" }, { "name":"BN406_02882 sitA; IRON-binding periplasmic ABC transporter protein\tK11604 sitA; manganese\/iron transport system substrate-binding protein" }, { "name":"BN406_02884 yfeC; Chelated iron transport system membrane protein yfeC\tK11605 sitC; manganese\/iron transport system permease protein" }, { "name":"BN406_02885 putative iron transport system membrane protein HI_0359\tK11606 sitD; manganese\/iron transport system permease protein" }, { "name":"BN406_02883 yfeB; Chelated iron transport system membrane protein YfeB\tK11607 sitB; manganese\/iron transport system ATP-binding protein" }, { "name":"BN406_00543 hypothetical protein\tK03523 bioY; biotin transport system substrate-specific component" }, { "name":"BN406_00544 hypothetical protein\tK16783 bioN; biotin transport system permease protein" }, { "name":"BN406_00545 bioM; Biotin transport ATP-binding protein BioM\tK16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]" }, { "name":"BN406_06014 lsrB; Autoinducer 2-binding protein lsrB\tK10555 lsrB; AI-2 transport system substrate-binding protein" }, { "name":"BN406_06012 lsrC; Autoinducer 2 import system permease protein lsrC\tK10556 lsrC; AI-2 transport system permease protein" }, { "name":"BN406_06013 lsrD; Autoinducer 2 import system permease protein lsrD\tK10557 lsrD; AI-2 transport system permease protein" }, { "name":"BN406_06011 lsrA; Autoinducer 2 import ATP-binding protein LsrA\tK10558 lsrA; AI-2 transport system ATP-binding protein" }, { "name":"BN406_06050 rkpR_kpsE; polysaccharide export-assoiated protein\tK10107 kpsE; capsular polysaccharide transport system permease protein" }, { "name":"BN406_06038 rkpT1; RkpT\tK09688 kpsM; capsular polysaccharide transport system permease protein" }, { "name":"BN406_06049 kpsT; Polysialic acid transport ATP-binding protein KpsT\tK09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]" }, { "name":"BN406_04269 nodJ; Nodulation protein J\tK09694 nodJ; lipooligosaccharide transport system permease protein" }, { "name":"BN406_04270 nodI; Nod factor export ATP-binding protein I\tK09695 nodI; lipooligosaccharide transport system ATP-binding protein" }, { "name":"BN406_01021 lipoprotein releasing system transmembrane protein LolC\/E family\tK09808 lolC_E_F; lipoprotein-releasing system permease protein" }, { "name":"BN406_06303 hypothetical protein\tK09808 lolC_E_F; lipoprotein-releasing system permease protein" }, { "name":"BN406_01022 lolD; Lipoprotein-releasing system ATP-binding protein LolD\tK09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]" }, { "name":"BN406_06302 lolD2; Lipoprotein-releasing system ATP-binding protein LolD 2\tK09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]" }, { "name":"BN406_03034 ccmD; HEME exporter D (cytochrome C-type biogenesis protein) transmembrane\tK02196 ccmD; heme exporter protein D" }, { "name":"BN406_03033 ccmC; HEME exporter C (cytochrome C-type biogenesis protein) transmembrane\tK02195 ccmC; heme exporter protein C" }, { "name":"BN406_03032 ccmB; HEME exporter B (cytochrome C-type biogenesis protein) transmembrane\tK02194 ccmB; heme exporter protein B" }, { "name":"BN406_03031 ccmA; Cytochrome c biogenesis ATP-binding export protein CcmA\tK02193 ccmA; heme exporter protein A [EC:7.6.2.5]" }, { "name":"BN406_00889 hypothetical protein\tK07091 lptF; lipopolysaccharide export system permease protein" }, { "name":"BN406_00888 hypothetical protein\tK11720 lptG; lipopolysaccharide export system permease protein" }, { "name":"BN406_00015 putative ABC transporter ATP-binding protein R00382\tK06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]" }, { "name":"BN406_04367 nosY; NosY permease\tK19341 nosY; Cu-processing system permease protein" }, { "name":"BN406_04366 nosF; Copper transport ATP-binding protein NosF\tK19340 nosF; Cu-processing system ATP-binding protein" }, { "name":"BN406_02514 hypothetical protein\tK09811 ftsX; cell division transport system permease protein" }, { "name":"BN406_02513 cell division ATP-binding protein FtsE\tK09812 ftsE; cell division transport system ATP-binding protein" }, { "name":"BN406_03293 putative ABC transporter ATP-binding protein y4gM\tK11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]" }, { "name":"BN406_05801 xenobiotic-transporting ATPase\tK11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]" }, { "name":"BN406_00834 putative toxin secretion ATP-binding ABC transporter protein\tK11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB\/CyaB" }, { "name":"BN406_00856 atm1; Iron-sulfur clusters transporter atm1, mitochondrial\tK24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter" }, { "name":"BN406_01553 putative ABC transporter ATP-binding protein HI_1051\tK18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump" }, { "name":"BN406_01554 putative ABC transporter ATP-binding protein HI_1051\tK18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump" }, { "name":"BN406_01767 prsD; Type I secretion system ATP-binding protein PrsD\tK12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease\/ATPase" }, { "name":"BN406_02803 type I secretion system ATPase\tK12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease\/ATPase" }, { "name":"BN406_05399 prsD; Type I secretion system ATP-binding protein PrsD\tK12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease\/ATPase" }, { "name":"BN406_05768 wgdA; ABC transporter ATP-binding protein\/permease\tK12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease\/ATPase" }, { "name":"BN406_06116 aprD; Alkaline protease secretion ATP-binding protein AprD\tK12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease\/ATPase" }, { "name":"BN406_01891 macB; Macrolide export ATP-binding\/permease protein MacB\tK05685 macB; macrolide transport system ATP-binding\/permease protein [EC:7.6.2.-]" }, { "name":"BN406_05607 ABC transporter domain-containing protein\tK02471 bacA; vitamin B12\/bleomycin\/antimicrobial peptide transport system ATP-binding\/permease protein" } ] }, { "name":"02060 Phosphotransferase system (PTS) [PATH:smi02060]", "children":[ { "name":"BN406_03174 phosphocarrier HPr\tK02784 ptsH; phosphocarrier protein HPr" }, { "name":"BN406_03175 IIA component of PTS system protein\tK02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]" }, { "name":"BN406_02470 ptsP; phosphoenolpyruvate phosphotransferase PTSP (enzyme I-Ntr) protein\tK08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]" }, { "name":"BN406_00012 ptsN; nitrogen regulatory IIA protein\tK02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]" } ] }, { "name":"03070 Bacterial secretion system [PATH:smi03070]", "children":[ { "name":"BN406_01245 tolC; outer membrane secretion protein\tK12340 tolC; outer membrane protein" }, { "name":"BN406_00835 type I secretion membrane fusion protein HlyD family\tK11003 hlyD; membrane fusion protein, hemolysin D" }, { "name":"BN406_00834 putative toxin secretion ATP-binding ABC transporter protein\tK11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB\/CyaB" }, { "name":"BN406_00204 secD2; bifunctional preprotein translocase subunit SecD\/SecF\tK12257 secDF; SecD\/SecF fusion protein" }, { "name":"BN406_01270 protein-export membrane protein SecD\tK12257 secDF; SecD\/SecF fusion protein" }, { "name":"BN406_01072 secE; preprotein translocase subunit SecE\tK03073 secE; preprotein translocase subunit SecE" }, { "name":"BN406_01171 secG; preprotein translocase subunit SecG\tK03075 secG; preprotein translocase subunit SecG" }, { "name":"BN406_01107 secY; preprotein translocase subunit SecY\tK03076 secY; preprotein translocase subunit SecY" }, { "name":"BN406_01269 YAJC protein\tK03210 yajC; preprotein translocase subunit YajC" }, { "name":"BN406_00076 inner membrane protein translocase component YidC\tK03217 yidC; YidC\/Oxa1 family membrane protein insertase" }, { "name":"BN406_02485 secA; preprotein translocase subunit SecA\tK03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]" }, { "name":"BN406_03038 ftsY; Signal recognition particle receptor FtsY\tK03110 ftsY; fused signal recognition particle receptor" }, { "name":"BN406_03142 secB; preprotein translocase subunit SecB\tK03071 secB; preprotein translocase subunit SecB" }, { "name":"BN406_03041 ffh; Signal recognition particle protein\tK03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]" }, { "name":"BN406_01260 tatA1; twin arginine translocase A\tK03116 tatA; sec-independent protein translocase protein TatA" }, { "name":"BN406_01261 tatB; sec-independent translocase\tK03117 tatB; sec-independent protein translocase protein TatB" }, { "name":"BN406_01262 tatC; SEC-independent translocase transmembrane protein\tK03118 tatC; sec-independent protein translocase protein TatC" }, { "name":"BN406_04445 virB1; VirB1 type IV secretion protein\tK03194 virB1; type IV secretion system protein VirB1" }, { "name":"BN406_04444 virB2; VirB2 type IV secretion protein\tK03197 virB2; type IV secretion system protein VirB2" }, { "name":"BN406_04443 virB3; VirB3 type IV secretion protein\tK03198 virB3; type IV secretion system protein VirB3" }, { "name":"BN406_04441 virB5; VirB5 type IV secretion protein\tK03200 virB5; type IV secretion system protein VirB5" }, { "name":"BN406_04438 virB7; VirB7-like protein\tK03202 virB7; type IV secretion system protein VirB7" }, { "name":"BN406_04436 virB9; Type IV secretion system protein virB9\tK03204 virB9; type IV secretion system protein VirB9" }, { "name":"BN406_04439 virB6; VirB6 type IV secretion protein\tK03201 virB6; type IV secretion system protein VirB6" }, { "name":"BN406_04437 virB8; VirB8 type IV secretion protein\tK03203 virB8; type IV secretion system protein VirB8" }, { "name":"BN406_04435 virB10; Type IV secretion system protein virB10\tK03195 virB10; type IV secretion system protein VirB10" }, { "name":"BN406_04442 virB4; Type IV secretion system protein virB4\tK03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]" }, { "name":"BN406_04434 virB11; Type IV secretion system protein VirB11\tK03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]" }, { "name":"BN406_04306 virD4; Type IV secretion system-coupling protein virD4\tK03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]" }, { "name":"BN406_06821 traG; putative conjugal transfer protein traG\tK03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]" } ] } ] }, { "name":"09132 Signal transduction", "children":[ { "name":"02020 Two-component system [PATH:smi02020]", "children":[ { "name":"BN406_00142 phoR; phosphate regulon sensor histidine kinase transmembrane protein\tK07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]" }, { "name":"BN406_00148 phoB; Phosphate regulon transcriptional regulatory protein phoB\tK07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB" }, { "name":"BN406_02947 alkaline phosphatase transmembrane protein\tK01113 phoD; alkaline phosphatase D [EC:3.1.3.1]" }, { "name":"BN406_00143 phosphate-binding periplasmic protein\tK02040 pstS; phosphate transport system substrate-binding protein" }, { "name":"BN406_02188 sensor histidine kinase transmembrane protein\tK07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]" }, { "name":"BN406_02187 petR; Protein PetR\tK07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR" }, { "name":"BN406_00679 degP1; putative periplasmic serine endoprotease DegP-like\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"BN406_01943 degP2; protease precursor signal peptide protein\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"BN406_00285 flaA; Flagellin A\tK02406 fliC; flagellin" }, { "name":"BN406_00286 flaB; Flagellin B\tK02406 fliC; flagellin" }, { "name":"BN406_00287 flaD; Flagellin D\tK02406 fliC; flagellin" }, { "name":"BN406_00288 flaC; Flagellin C\tK02406 fliC; flagellin" }, { "name":"BN406_00270 motA; flagellar motor protein MotA\tK02556 motA; chemotaxis protein MotA" }, { "name":"BN406_03538 KdpD histidine kinase\tK07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]" }, { "name":"BN406_03539 kdpE; Transcriptional regulatory protein KdpE\tK07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE" }, { "name":"BN406_03535 kdpA; potassium-transporting ATPase subunit A\tK01546 kdpA; potassium-transporting ATPase potassium-binding subunit" }, { "name":"BN406_03536 kdpB; Potassium-transporting ATPase B chain\tK01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]" }, { "name":"BN406_03537 kdpC; potassium-transporting ATPase subunit C\tK01548 kdpC; potassium-transporting ATPase KdpC subunit" }, { "name":"BN406_05270 two-component sensor histidine kinase\tK07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]" }, { "name":"BN406_05269 two-component response regulator protein\tK07774 tctD; two-component system, OmpR family, response regulator TctD" }, { "name":"BN406_03972 putative 52,8 kDa protein in TAR-I ttuC' 3'region\tK07793 tctA; putative tricarboxylic transport membrane protein" }, { "name":"BN406_05106 putative 52,8 kDa protein in TAR-I ttuC' 3'region\tK07793 tctA; putative tricarboxylic transport membrane protein" }, { "name":"BN406_05238 hypothetical protein\tK07793 tctA; putative tricarboxylic transport membrane protein" }, { "name":"BN406_05265 putative 52,8 kDa protein in TAR-I ttuC' 3'region\tK07793 tctA; putative tricarboxylic transport membrane protein" }, { "name":"BN406_05107 hypothetical protein\tK07794 tctB; putative tricarboxylic transport membrane protein" }, { "name":"BN406_05237 hypothetical protein\tK07794 tctB; putative tricarboxylic transport membrane protein" }, { "name":"BN406_05266 hypothetical protein\tK07794 tctB; putative tricarboxylic transport membrane protein" }, { "name":"BN406_05108 UPF0065 protein\tK07795 tctC; putative tricarboxylic transport membrane protein" }, { "name":"BN406_05236 hypothetical protein\tK07795 tctC; putative tricarboxylic transport membrane protein" }, { "name":"BN406_05267 hypothetical protein\tK07795 tctC; putative tricarboxylic transport membrane protein" }, { "name":"BN406_00975 cytochrome C oxidase assembly transmembrane protein\tK02259 COX15; heme a synthase [EC:1.17.99.9]" }, { "name":"BN406_00001 dnaA; Chromosomal replication initiator protein DnaA\tK02313 dnaA; chromosomal replication initiator protein" }, { "name":"BN406_00915 Lysylphosphatidylglycerol synthetase\tK14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]" }, { "name":"BN406_03177 chvG; Sensor protein ChvG\tK14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]" }, { "name":"BN406_03178 chvI; Transcriptional regulatory protein ChvI\tK14981 chvI; two-component system, OmpR family, response regulator ChvI" }, { "name":"BN406_04112 response regulator receiver protein\tK14981 chvI; two-component system, OmpR family, response regulator ChvI" }, { "name":"BN406_02975 citE; citrate lyase beta subunit\tK01644 citE; citrate lyase subunit beta \/ citryl-CoA lyase [EC:4.1.3.34]" }, { "name":"BN406_05350 two-component response regulator protein\tK07684 narL; two-component system, NarL family, nitrate\/nitrite response regulator NarL" }, { "name":"BN406_06579 LuxR family two component transcriptional regulator\tK07684 narL; two-component system, NarL family, nitrate\/nitrite response regulator NarL" }, { "name":"BN406_03078 LuxR family transcriptional regulator\tK07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA" }, { "name":"BN406_05625 ampC; beta-lactamase\tK01467 ampC; beta-lactamase class C [EC:3.5.2.6]" }, { "name":"BN406_05015 des; Fatty acid desaturase\tK10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]" }, { "name":"BN406_04607 Pilus assembly chaperone\tK07346 fimC; fimbrial chaperone protein" }, { "name":"BN406_02479 putative membrane protein\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"BN406_03271 putative membrane protein\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"BN406_04590 putative membrane protein\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"BN406_03273 cpaB1; pilus assembly signal peptide protein\tK02279 cpaB; pilus assembly protein CpaB" }, { "name":"BN406_04593 Flp pilus assembly protein CpaB\tK02279 cpaB; pilus assembly protein CpaB" }, { "name":"BN406_03274 cpaC1; pilus assembly transmembrane protein\tK02280 cpaC; pilus assembly protein CpaC" }, { "name":"BN406_04995 type II and III secretion system protein\tK02280 cpaC; pilus assembly protein CpaC" }, { "name":"BN406_03276 cpaE1; response regulator protein\tK02282 cpaE; pilus assembly protein CpaE" }, { "name":"BN406_04592 cpaE2; CpaE2 pilus assembly protein\tK02282 cpaE; pilus assembly protein CpaE" }, { "name":"BN406_03277 type II secretion system protein E\tK02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]" }, { "name":"BN406_04589 cpaF2; CpaF2 pilus assembly protein\tK02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]" }, { "name":"BN406_03278 hypothetical protein\tK12510 tadB; tight adherence protein B" }, { "name":"BN406_04588 type II secretion system F domain-containing protein\tK12510 tadB; tight adherence protein B" }, { "name":"BN406_03279 hypothetical protein\tK12511 tadC; tight adherence protein C" }, { "name":"BN406_04587 type II secretion system F domain-containing protein\tK12511 tadC; tight adherence protein C" }, { "name":"BN406_01584 hypothetical protein\tK27080 tadG; tight adherence protein G" }, { "name":"BN406_00029 glnD; PII uridylyl-transferase\tK00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]" }, { "name":"BN406_01378 glnB1; Nitrogen regulatory protein P-II\tK04751 glnB; nitrogen regulatory protein P-II 1" }, { "name":"BN406_01190 ntrB; Nitrogen regulation protein ntrB\tK07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]" }, { "name":"BN406_01191 ntrC; Nitrogen assimilation regulatory protein\tK07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG" }, { "name":"BN406_00321 glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_01379 glnA; Glutamine synthetase 1\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_02037 hypothetical protein\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_02355 glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_02429 glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_03224 glnT; Glutamine synthetase 3\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_05261 glnII; Glutamine synthetase 2\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_01192 ntrY; Nitrogen regulation protein ntrY\tK13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]" }, { "name":"BN406_01193 ntrX; Nitrogen assimilation regulatory protein ntrX\tK13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX" }, { "name":"BN406_04230 nifA; Nif-specific regulatory protein\tK02584 nifA; Nif-specific regulatory protein" }, { "name":"BN406_00166 fadA; Putative acyltransferase Rv0859\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_00541 vraB; Putative acetyl-CoA C-acetyltransferase vraB\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_01442 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_03063 phbA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_04528 thlA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_05184 dctB; C4-dicarboxylate transport sensor protein dctB\tK10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]" }, { "name":"BN406_05793 two-component sensor histidine kinase\tK10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]" }, { "name":"BN406_05183 dctD1; C4-dicarboxylate transport transcriptional regulatory protein dctD\tK10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD" }, { "name":"BN406_05794 dctD3; C4-dicarboxylate transport transcriptional regulatory protein dctD\tK10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD" }, { "name":"BN406_05185 dctA; C4-dicarboxylate transporter DctA\tK11103 dctA; aerobic C4-dicarboxylate transport protein" }, { "name":"BN406_00014 rpoN; RNA polymerase sigma-54 factor\tK03092 rpoN; RNA polymerase sigma-54 factor" }, { "name":"BN406_00257 cheRch1; putative chemotaxis protein methyltransferase\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"BN406_04582 MCP methyltransferase CheR-type\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"BN406_06169 putative methyltransferase\tK13924 cheBR; two-component system, chemotaxis family, CheB\/CheR fusion protein [EC:2.1.1.80 3.1.1.61]" }, { "name":"BN406_00049 mcpX; chemoreceptor methyl-accepting chemotaxis transmembrane protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_00078 methyl-accepting chemotaxis sensory transducer\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_00252 mcpE; putative chemoreceptor mcpE\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_00324 putative chemoreceptor y4fA\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_00532 methyl-accepting chemotaxis sensory transducer with Cache sensor\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_01626 mcpV; chemoreceptor methyl-accepting chemotaxis transmembrane protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_01975 methyl-accepting chemotaxis sensory transducer\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_02861 methyl-accepting chemotaxis sensory transducer with Pas\/Pac sensor\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_04584 mcpS; Methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_00256 cheW; Chemotaxis protein CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"BN406_01974 cheW2; chemotaxis protein\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"BN406_02860 cheW3; chemotaxis protein\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"BN406_04583 CheW protein\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"BN406_00255 cheA; Chemotaxis protein CheA\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"BN406_04585 Sensor histidine kinase\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"BN406_00254 cheY1; chemotaxis regulator protein\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"BN406_00259 cheY; putative chemotaxis protein CheY\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"BN406_02576 2-component receiver domain protein\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"BN406_00258 cheB1; Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"BN406_04586 cheB3; Chemotaxis response regulator protein-glutamate methylesterase of group 3 operon\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"BN406_06170 CheB methylesterase\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"BN406_00683 multi-sensor signal transduction histidine kinase\tK07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]" }, { "name":"BN406_01615 sensor histidine kinase transmembrane protein\tK07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]" }, { "name":"BN406_01028 pleD; Response regulator PleD\tK02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]" }, { "name":"BN406_00658 putative sensor-like histidine kinase R01002\tK11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]" }, { "name":"BN406_01027 divK; Polar-differentiation response regulator divK\tK11443 divK; two-component system, cell cycle response regulator DivK" }, { "name":"BN406_01536 sensor histidine kinase transmembrane protein\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"BN406_02577 hypothetical protein\tK13588 chpT; histidine phosphotransferase ChpT" }, { "name":"BN406_02575 ctrA; Cell cycle response regulator CtrA\tK13584 ctrA; two-component system, cell cycle response regulator CtrA" }, { "name":"BN406_00091 hypothetical protein\tK13589 cpdR; two-component system, cell cycle response regulator CpdR" }, { "name":"BN406_02683 2-component receiver domain protein\tK13589 cpdR; two-component system, cell cycle response regulator CpdR" }, { "name":"BN406_03939 hypothetical protein\tK13589 cpdR; two-component system, cell cycle response regulator CpdR" }, { "name":"BN406_04920 hypothetical protein\tK13589 cpdR; two-component system, cell cycle response regulator CpdR" }, { "name":"BN406_05073 hypothetical protein\tK13589 cpdR; two-component system, cell cycle response regulator CpdR" }, { "name":"BN406_05465 hypothetical protein\tK13589 cpdR; two-component system, cell cycle response regulator CpdR" }, { "name":"BN406_01445 periplasmic binding protein\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_01649 mannitol-binding periplasmic signal peptide protein\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_01867 hypothetical protein\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_04942 TRAP dicarboxylate transporter subunit DctP\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_04997 ABC transporter substrate-binding protein\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_05098 ABC transporter substrate-binding protein\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_05564 putative C4-dicarboxylate transporter periplasmic solute-binding protein precursor\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_05732 dctP; periplasmic C4-dicarboxylate transport protein\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_06236 substrate-binding protein\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_06298 TRAP dicarboxylate transporter subunit DctP\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_06352 TRAP-type large permease component\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_06370 putative ABC transporter\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_01647 hypothetical protein\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_01866 hypothetical protein\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_04944 tripartite AtP-independent periplasmic transporter subunit DctQ\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_04998 hypothetical protein\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_05100 tripartite AtP-independent periplasmic transporter subunit DctQ\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_05565 putative small C4-dicarboxylate uptake permease protein\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_05733 tripartite AtP-independent periplasmic transporter subunit DctQ\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_06235 permease\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_06299 TRAP dicarboxylate transporter\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_06350 tripartite AtP-independent periplasmic transporter subunit DctQ\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_06369 putative TRAP dicarboxylate transporter\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_01648 TRAP dicarboxylate transporter subunit DctM\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_01865 transmembrane protein\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_04943 Putative TRAP transporter large permease protein HI_1029\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_04999 TRAP dicarboxylate transporter subunit DctM\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_05099 Putative TRAP transporter large permease protein HI_1029\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_05566 large C4-dicarboxylate uptake permease, DedA family protein\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_05734 ygiK; putative protein ygiK\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_06234 TRAP dicarboxylate transporter subunit DctM\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_06300 hypothetical protein\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_06351 TRAP dicarboxylate transporter subunit DctM\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_06368 siaT; Sialic acid TRAP transporter permease protein siaT\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_01446 transmembrane protein\tK21393 dctQM; TRAP-type transport system permease protein" }, { "name":"BN406_04389 fixL; Sensor protein fixL\tK14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]" }, { "name":"BN406_04201 fixJ1; Transcriptional regulatory protein fixJ\tK14987 fixJ; two-component system, LuxR family, response regulator FixJ" }, { "name":"BN406_04388 fixJ3; Transcriptional regulatory protein fixJ\tK14987 fixJ; two-component system, LuxR family, response regulator FixJ" }, { "name":"BN406_04142 fixK1; transcriptional regulator FixK\tK15861 fixK; CRP\/FNR family transcriptional regulator, nitrogen fixation regulation protein" }, { "name":"BN406_04203 fixK3; Nitrogen fixation regulation protein fixK\tK15861 fixK; CRP\/FNR family transcriptional regulator, nitrogen fixation regulation protein" }, { "name":"BN406_04387 fixK5; Nitrogen fixation regulation protein fixK\tK15861 fixK; CRP\/FNR family transcriptional regulator, nitrogen fixation regulation protein" }, { "name":"BN406_04017 gltL; Glutamate\/aspartate transport ATP-binding protein GltL\tK10004 gltL; glutamate\/aspartate transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_04016 glutamate\/aspartate ABC transporter, permease protein\tK10002 gltK; glutamate\/aspartate transport system permease protein" }, { "name":"BN406_04015 amino ABC transporter permease, 3-TM region, His\/Glu\/Gln\/Arg\/opine family domain-containing protein 1\tK10003 gltJ; glutamate\/aspartate transport system permease protein" }, { "name":"BN406_04014 glutamate\/aspartate periplasmic-binding protein 1\tK10001 gltI; glutamate\/aspartate transport system substrate-binding protein" }, { "name":"BN406_00120 transcription regulator protein\tK10914 crp; CRP\/FNR family transcriptional regulator, cyclic AMP receptor protein" }, { "name":"BN406_01519 glsA; glutaminase\tK01425 glsA; glutaminase [EC:3.5.1.2]" }, { "name":"BN406_03200 actS; sensor histidine kinase transmembrane protein\tK15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]" }, { "name":"BN406_03199 actR; Acid tolerance regulatory protein ActR\tK15012 regA; two-component system, response regulator RegA" }, { "name":"BN406_01552 petA; Ubiquinol-cytochrome c reductase iron-sulfur subunit\tK00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]" }, { "name":"BN406_01551 fbcB; cytochrome B transmembrane protein\tK00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit" }, { "name":"BN406_01550 fbcC; cytochrome C1 protein\tK00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit" }, { "name":"BN406_02363 cytochrome C transmembrane protein\tK08738 CYC; cytochrome c" }, { "name":"BN406_03353 cycM; Cytochrome c homolog\tK08738 CYC; cytochrome c" }, { "name":"BN406_04546 cytochrome c class I\tK08738 CYC; cytochrome c" }, { "name":"BN406_06485 cytochrome c protein\tK08738 CYC; cytochrome c" }, { "name":"BN406_04076 fixN1; Cytochrome c oxidase subunit 1 homolog, bacteroid\tK00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]" }, { "name":"BN406_04204 fixN3; Cytochrome c oxidase subunit 1 homolog, bacteroid\tK00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]" }, { "name":"BN406_04385 fixN5; Cytochrome c oxidase subunit 1 homolog, bacteroid\tK00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]" }, { "name":"BN406_04781 cytochrome-c oxidase\tK00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]" }, { "name":"BN406_04077 cytochrome c oxidase, cbb3-type subunit II\tK00405 ccoO; cytochrome c oxidase cbb3-type subunit II" }, { "name":"BN406_04205 fixO2; cbb3-type cytochrome c oxidase subunit II\tK00405 ccoO; cytochrome c oxidase cbb3-type subunit II" }, { "name":"BN406_04384 fixO1; cbb3-type cytochrome c oxidase subunit II\tK00405 ccoO; cytochrome c oxidase cbb3-type subunit II" }, { "name":"BN406_04780 cytochrome C oxidase mono-heme subunit\/FixO\tK15862 ccoNO; cytochrome c oxidase cbb3-type subunit I\/II [EC:7.1.1.9]" }, { "name":"BN406_04078 fixQ3; FixQ3 nitrogen fixation protein\tK00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV" }, { "name":"BN406_04206 unnamed protein product\tK00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV" }, { "name":"BN406_04383 unnamed protein product\tK00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV" }, { "name":"BN406_04079 fixP1; Cbb3-type cytochrome c oxidase subunit FixP\tK00406 ccoP; cytochrome c oxidase cbb3-type subunit III" }, { "name":"BN406_04207 fixP3; Cbb3-type cytochrome c oxidase subunit FixP\tK00406 ccoP; cytochrome c oxidase cbb3-type subunit III" }, { "name":"BN406_04382 fixP5; Cbb3-type cytochrome c oxidase subunit FixP\tK00406 ccoP; cytochrome c oxidase cbb3-type subunit III" }, { "name":"BN406_00194 qxtA; quinol oxidase subunit I transmembrane protein\tK00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]" }, { "name":"BN406_00193 qxtB; quinol oxidase subunit II transmembrane protein\tK00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]" }, { "name":"BN406_01245 tolC; outer membrane secretion protein\tK12340 tolC; outer membrane protein" }, { "name":"BN406_00213 rkpU; capsule polysaccharide exporter protein\tK01991 wza; polysaccharide biosynthesis\/export protein" }, { "name":"BN406_00969 polysaccharide export system periplasmic transmembrane protein\tK01991 wza; polysaccharide biosynthesis\/export protein" }, { "name":"BN406_06070 polysaccharide export protein\tK01991 wza; polysaccharide biosynthesis\/export protein" }, { "name":"BN406_00970 lipopolysaccharide biosynthesis protein\tK16692 etk-wzc; tyrosine-protein kinase Etk\/Wzc [EC:2.7.10.3]" }, { "name":"BN406_01764 fecR; IRON transport regulator transmembrane protein\tK07165 fecR; transmembrane sensor" } ] }, { "name":"04010 MAPK signaling pathway" }, { "name":"04013 MAPK signaling pathway - fly" }, { "name":"04016 MAPK signaling pathway - plant" }, { "name":"04011 MAPK signaling pathway - yeast" }, { "name":"04012 ErbB signaling pathway" }, { "name":"04014 Ras signaling pathway" }, { "name":"04015 Rap1 signaling pathway" }, { "name":"04310 Wnt signaling pathway" }, { "name":"04330 Notch signaling pathway" }, { "name":"04340 Hedgehog signaling pathway" }, { "name":"04341 Hedgehog signaling pathway - fly" }, { "name":"04350 TGF-beta signaling pathway" }, { "name":"04390 Hippo signaling pathway" }, { "name":"04391 Hippo signaling pathway - fly" }, { "name":"04392 Hippo signaling pathway - multiple species" }, { "name":"04370 VEGF signaling pathway" }, { "name":"04371 Apelin signaling pathway" }, { "name":"04630 JAK-STAT signaling pathway" }, { "name":"04064 NF-kappa B signaling pathway" }, { "name":"04668 TNF signaling pathway" }, { "name":"04066 HIF-1 signaling pathway" }, { "name":"04068 FoxO signaling pathway" }, { "name":"04020 Calcium signaling pathway" }, { "name":"04070 Phosphatidylinositol signaling system" }, { "name":"04072 Phospholipase D signaling pathway" }, { "name":"04071 Sphingolipid signaling pathway" }, { "name":"04024 cAMP signaling pathway" }, { "name":"04022 cGMP-PKG signaling pathway" }, { "name":"04151 PI3K-Akt signaling pathway" }, { "name":"04152 AMPK signaling pathway" }, { "name":"04150 mTOR signaling pathway" }, { "name":"04075 Plant hormone signal transduction" } ] }, { "name":"09133 Signaling molecules and interaction", "children":[ { "name":"04080 Neuroactive ligand-receptor interaction" }, { "name":"04082 Neuroactive ligand signaling" }, { "name":"04081 Hormone signaling" }, { "name":"04060 Cytokine-cytokine receptor interaction" }, { "name":"04061 Viral protein interaction with cytokine and cytokine receptor" }, { "name":"04512 ECM-receptor interaction" }, { "name":"04514 Cell adhesion molecule (CAM) interaction" }, { "name":"04517 IgSF CAM signaling" }, { "name":"04518 Integrin signaling" }, { "name":"04519 Cadherin signaling" } ] } ] }, { "name":"09140 Cellular Processes", "children":[ { "name":"09141 Transport and catabolism", "children":[ { "name":"04144 Endocytosis" }, { "name":"04145 Phagocytosis" }, { "name":"04142 Lysosome biogenesis [PATH:smi04142]", "children":[ { "name":"BN406_06340 sulfatase-modifying factor protein\tK13444 SUMF1; formylglycine-generating enzyme [EC:1.8.3.7]" }, { "name":"BN406_05831 hexA; beta-N-acetylhexosaminidase\tK12373 HEXA_B; hexosaminidase [EC:3.2.1.52]" }, { "name":"BN406_01653 bmnA; putative BETA-mannosidase protein\tK01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]" } ] }, { "name":"04146 Peroxisome [PATH:smi04146]", "children":[ { "name":"BN406_00132 fadD; Long-chain-fatty-acid--CoA ligase\tK01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]" }, { "name":"BN406_03359 hypothetical protein\tK03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]" }, { "name":"BN406_05000 hypothetical protein\tK01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]" }, { "name":"BN406_03708 aminotransferase, class V superfamily\tK00830 AGXT; alanine-glyoxylate transaminase \/ serine-glyoxylate transaminase \/ serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]" }, { "name":"BN406_04551 Agxt; Serine--pyruvate aminotransferase, mitochondrial\tK00830 AGXT; alanine-glyoxylate transaminase \/ serine-glyoxylate transaminase \/ serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]" }, { "name":"BN406_01525 icd; Isocitrate dehydrogenase [NADP]\tK00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]" }, { "name":"BN406_05948 HMGCL; Hydroxymethylglutaryl-CoA lyase, mitochondrial\tK01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]" }, { "name":"BN406_00421 katA; Catalase A\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"BN406_05126 katE; Catalase C\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"BN406_00832 sodC; superoxide dismutase Cu-Zn precursor (bacteriocuprein) transmembrane protein\tK04565 SOD1; superoxide dismutase, Cu-Zn family [EC:1.15.1.1]" }, { "name":"BN406_00630 sodB; superoxide dismutase Fe protein\tK04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]" } ] }, { "name":"04149 Peroxisome - yeast" }, { "name":"04140 Autophagy - animal" }, { "name":"04138 Autophagy - yeast" }, { "name":"04136 Autophagy - other" }, { "name":"04137 Mitophagy - animal" }, { "name":"04139 Mitophagy - yeast" }, { "name":"04148 Efferocytosis [PATH:smi04148]", "children":[ { "name":"BN406_02859 arcB; Arginase\tK01476 rocF; arginase [EC:3.5.3.1]" }, { "name":"BN406_04674 Arginase\/agmatinase\/formiminoglutamase\tK01476 rocF; arginase [EC:3.5.3.1]" }, { "name":"BN406_02731 ornithine, DAP, or arginine decarboxylase\tK01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]" }, { "name":"BN406_04153 speF; Ornithine decarboxylase\tK01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]" }, { "name":"BN406_01552 petA; Ubiquinol-cytochrome c reductase iron-sulfur subunit\tK00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]" } ] } ] }, { "name":"09143 Cell growth and death", "children":[ { "name":"04110 Cell cycle" }, { "name":"04111 Cell cycle - yeast" }, { "name":"04112 Cell cycle - Caulobacter" }, { "name":"04113 Meiosis - yeast" }, { "name":"04114 Oocyte meiosis" }, { "name":"04210 Apoptosis" }, { "name":"04214 Apoptosis - fly" }, { "name":"04215 Apoptosis - multiple species" }, { "name":"04216 Ferroptosis" }, { "name":"04217 Necroptosis" }, { "name":"04115 p53 signaling pathway" }, { "name":"04218 Cellular senescence" }, { "name":"04156 Integrated stress response (ISR) signaling pathway [PATH:smi04156]", "children":[ { "name":"BN406_05809 htpG; molecular chaperone HtpG\tK04079 HSP90A; molecular chaperone HtpG" }, { "name":"BN406_RNA00010 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"BN406_RNA00034 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"BN406_RNA00036 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"BN406_RNA00037 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"BN406_RNA00044 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"BN406_RNA00046 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"BN406_RNA00060 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"BN406_03312 dnaK; Chaperone protein DnaK\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"BN406_00448 groL1; 60 kDa chaperonin 1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_00931 groL2; 60 kDa chaperonin 2\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_04188 groL1; 60 kDa chaperonin 1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_04784 groL6; 60 kDa chaperonin 6\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_05019 groL3; 60 kDa chaperonin 3\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_05660 groL5; 60 kDa chaperonin 5\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_02517 chaC; cation transport protein\tK07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]" } ] } ] }, { "name":"09144 Cellular community - eukaryotes", "children":[ { "name":"04510 Focal adhesion" }, { "name":"04520 Adherens junction" }, { "name":"04530 Tight junction" }, { "name":"04540 Gap junction" }, { "name":"04550 Signaling pathways regulating pluripotency of stem cells" } ] }, { "name":"09145 Cellular community - prokaryotes", "children":[ { "name":"02024 Quorum sensing [PATH:smi02024]", "children":[ { "name":"BN406_01196 hfq; RNA-binding protein Hfq\tK03666 hfq; host factor-I protein" }, { "name":"BN406_01587 aroF; DAHP synthetase prtein\tK01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]" }, { "name":"BN406_01860 putative isomerase mll1393\tK06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]" }, { "name":"BN406_02626 hypothetical protein\tK06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]" }, { "name":"BN406_03539 kdpE; Transcriptional regulatory protein KdpE\tK07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE" }, { "name":"BN406_03078 LuxR family transcriptional regulator\tK07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA" }, { "name":"BN406_06014 lsrB; Autoinducer 2-binding protein lsrB\tK10555 lsrB; AI-2 transport system substrate-binding protein" }, { "name":"BN406_06012 lsrC; Autoinducer 2 import system permease protein lsrC\tK10556 lsrC; AI-2 transport system permease protein" }, { "name":"BN406_06013 lsrD; Autoinducer 2 import system permease protein lsrD\tK10557 lsrD; AI-2 transport system permease protein" }, { "name":"BN406_06011 lsrA; Autoinducer 2 import ATP-binding protein LsrA\tK10558 lsrA; AI-2 transport system ATP-binding protein" }, { "name":"BN406_06009 lsrK; Autoinducer 2 kinase LsrK\tK11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189]" }, { "name":"BN406_06010 lsrR; Transcriptional regulator LsrR\tK11531 lsrR; lsr operon transcriptional repressor" }, { "name":"BN406_06008 antibiotic biosynthesis monooxygenase\tK11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32]" }, { "name":"BN406_04334 traI; Acyl-homoserine-lactone synthase\tK22955 traI; acyl homoserine lactone synthase [EC:2.3.1.184]" }, { "name":"BN406_06844 traI; putative acyl-homoserine-lactone synthase\tK22955 traI; acyl homoserine lactone synthase [EC:2.3.1.184]" }, { "name":"BN406_04338 luxR; regulatory protein LuxR\tK19732 traR; LuxR family transcriptional regulator, activator of conjugal transfer of Ti plasmids" }, { "name":"BN406_06832 traR; putative transcriptional activator protein traR\tK19732 traR; LuxR family transcriptional regulator, activator of conjugal transfer of Ti plasmids" }, { "name":"BN406_06843 trbB; putative conjugal transfer protein TrbB\tK20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]" }, { "name":"BN406_06842 putative secreted protein\tK20528 trbC; type IV secretion system protein TrbC" }, { "name":"BN406_06841 putative membrane protein\tK20529 trbD; type IV secretion system protein TrbD" }, { "name":"BN406_06840 trbE; Conjugal transfer protein trbE\tK20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]" }, { "name":"BN406_06839 trbJ; putative conjugal transfer protein trbJ\tK20266 trbJ; type IV secretion system protein TrbJ" }, { "name":"BN406_06838 putative secreted protein\tK20555 trbK; type IV secretion system protein TrbK" }, { "name":"BN406_06837 trbL; putative conjugal transfer protein trbL\tK07344 trbL; type IV secretion system protein TrbL" }, { "name":"BN406_06836 trbF; putative conjugal transfer protein trbF\tK20531 trbF; type IV secretion system protein TrbF" }, { "name":"BN406_06835 trbG; putative conjugal transfer protein trbG\tK20532 trbG; type IV secretion system protein TrbG" }, { "name":"BN406_06834 trbH; putative conjugal transfer protein trbH\tK20267 trbH; type IV secretion system protein TrbH" }, { "name":"BN406_06833 trbI; putative conjugal transfer protein trbI\tK20533 trbI; type IV secretion system protein TrbI" }, { "name":"BN406_06831 hypothetical protein\tK20272 traM; TraR antiactivator" }, { "name":"BN406_02041 periplasmic binding ABC transporter protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_02088 ydcS; Putative ABC transporter periplasmic-binding protein ydcS\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_02347 spermidine\/putrescine ABC transporter periplasmic protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_03631 extracellular solute-binding protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_04002 extracellular solute-binding protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_04024 Spermidine\/putrescine-binding periplasmic protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_04025 spermidine\/putrescine ABC transporter substrate-binding protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_04220 ABC transporter substrate-binding protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_04706 extracellular solute-binding protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_05879 ABC transporter substrate-binding protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_06289 family 1 extracellular solute-binding protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_06692 spermidine\/putrescine-binding periplasmic protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_02043 permease\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_02091 ydcV; Inner membrane ABC transporter permease protein ydcV\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_02344 spermidine\/putrescine ABC transporter permease\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_03633 ABC transporter\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_04005 ABC transporter\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_04027 transporter, permease\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_04222 ABC transporter permease\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_04703 ABC transporter\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_05877 ABC transporter\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_06291 ABC transporter permease\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_06689 binding-protein-dependent transport systems inner membrane component\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_02042 ABC transporter\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_02090 ydcU; Inner membrane ABC transporter permease protein ydcU\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_02345 spermidine\/putrescine ABC transporter permease\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_03632 ABC transporter permease\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_04004 ABC transporter permease\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_04026 spermidine\/putrescine ABC transporter inner membrane protein\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_04221 ABC transporter permease\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_04704 ABC transporter integral membrane protein\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_05878 potB; spermidineputrescine ABC transporter permeasee protein\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_06290 ABC transporter\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_06690 putative Spermidine\/putrescine ABC transporter (permease protein)\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_02044 potA3; Spermidine\/putrescine import ATP-binding protein PotA\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_02089 ydcT; putative ABC transporter ATP-binding protein YdcT\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_02346 fbpC; Fe(3+) ions import ATP-binding protein FbpC\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_03630 potA1; Spermidine\/putrescine import ATP-binding protein PotA\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_04003 potA3; Spermidine\/putrescine import ATP-binding protein PotA\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_04032 potA5; Spermidine\/putrescine import ATP-binding protein PotA\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_04223 potA7; Spermidine\/putrescine import ATP-binding protein PotA\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_04705 potA9; Spermidine\/putrescine import ATP-binding protein PotA\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_05876 fbpC; Fe(3+) ions import ATP-binding protein FbpC\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_06292 potA1; Spermidine\/putrescine import ATP-binding protein PotA\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_06691 potA1; Spermidine\/putrescine import ATP-binding protein PotA\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_00579 Leu\/Ile\/Val-binding protein homolog 3\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_01495 amino acid-binding periplasmic protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_02329 Leu\/Ile\/Val-binding protein homolog 1\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_02433 branched chain amino acid ABC transporter periplasmic protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_02829 periplasmic binding ABC transporter protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_03875 Leu\/Ile\/Val-binding protein homolog 8\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_04051 Leu\/Ile\/Val-binding protein homolog 1\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_05226 Leu\/Ile\/Val-binding protein homolog 6\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_06700 putative secreted protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_06785 branched-chain amino acid ABC transporter substrate-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_00902 ABC transporter\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"BN406_02334 livH; High-affinity branched-chain amino acid transport system permease protein livH\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"BN406_02436 high-affinity branched-chain amino acid transport permease ABC transporter protein\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"BN406_02832 ABC transporter permease\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"BN406_03876 ABC transporter permease\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"BN406_05227 ABC transporter\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"BN406_06702 putative membrane protein\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"BN406_02333 livM; high-affinity branched-chain amino acid transport permease ABC transporter protein\tK01998 livM; branched-chain amino acid transport system permease protein" }, { "name":"BN406_02437 branched chain amino acid ABC transporter permease\tK01998 livM; branched-chain amino acid transport system permease protein" }, { "name":"BN406_02833 ABC transporter\tK01998 livM; branched-chain amino acid transport system permease protein" }, { "name":"BN406_03877 livG; probabable high-affinity branched-chain amino acid transport atp-binding abc transporter protein\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_05228 ABC transporter\tK01998 livM; branched-chain amino acid transport system permease protein" }, { "name":"BN406_06703 putative branched-chain amino acid ABC transporter, permease protein\tK01998 livM; branched-chain amino acid transport system permease protein" }, { "name":"BN406_02332 braF; High-affinity branched-chain amino acid transport ATP-binding protein BraF\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_02434 high-affinity branched-chain amino acid transport ATP-binding ABC transporter protein\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_02830 ABC transporter ATP-binding protein\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_05229 monosaccharide-transporting ATPase\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_06701 putative branched-chain amino acid ABC transporter, ATP-binding protein\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_02331 livF1; High-affinity branched-chain amino acid transport ATP-binding protein LivF\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_02435 livF3; High-affinity branched-chain amino acid transport ATP-binding protein LivF\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_02831 ABC transporter ATP-binding protein\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_03878 livF; High-affinity branched-chain amino acid transport ATP-binding protein LivF\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_05230 Fe(3+)-transporting ATPase\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_06698 hypothetical protein\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_05911 hypothetical protein\tK01728 pel; pectate lyase [EC:4.2.2.2]" }, { "name":"BN406_00132 fadD; Long-chain-fatty-acid--CoA ligase\tK01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]" }, { "name":"BN406_00120 transcription regulator protein\tK10914 crp; CRP\/FNR family transcriptional regulator, cyclic AMP receptor protein" }, { "name":"BN406_01641 zur; zinc uptake regulation protein\tK09823 zur; Fur family transcriptional regulator, zinc uptake regulator" }, { "name":"BN406_00945 ribD; riboflavin biosynthesis protein\tK11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase \/ 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]" }, { "name":"BN406_01572 autoinducer synthase\tK22968 sinI; acyl homoserine lactone synthase [EC:2.3.1.184]" }, { "name":"BN406_01571 transcription regulator HSL-dependent protein\tK19733 sinR; LuxR family transcriptional regulator, quorum-sensing system regulator SinR" }, { "name":"BN406_05799 oppA; oligopeptide uptake ABC transporter substrate-binding protein precursor\tK15580 oppA; oligopeptide transport system substrate-binding protein" }, { "name":"BN406_05798 oppB; Oligopeptide transport system permease protein oppB\tK15581 oppB; oligopeptide transport system permease protein" }, { "name":"BN406_05797 ABC transporter\tK15582 oppC; oligopeptide transport system permease protein" }, { "name":"BN406_05796 yejF3; putative ABC transporter ATP-binding protein YejF\tK10823 oppF; oligopeptide transport system ATP-binding protein" }, { "name":"BN406_01382 Putative binding protein BRA0576\/BS1330_II0571\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_01680 peptide-binding periplasmic ABC transporter protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_02078 periplasmic binding protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_02083 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_02262 dppA2; dipeptide binding periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_02385 dipeptide-binding periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_02441 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_02443 peptide-binding periplasmic ABC transporter protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_02678 peptide ABC transporter\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_02825 periplasmic binding ABC transporter protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_03579 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_03756 extracellular solute-binding protein, family 5\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_03771 family 5 extracellular solute-binding protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_03801 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_03923 Periplasmic dipeptide transport protein precursor\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_03929 ABC transporter substrate-binding protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_04327 putative oligopeptidemurein peptide ABC transporter periplasmic solute-binding protein precursor\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_04488 probabable ABC transporter, periplasmic solute-binding protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_04491 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_04522 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_04632 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_04765 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_05033 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_05778 orf23; dipeptide uptake ABC transporter substrate-binding protein precursor\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_05890 mureinpeptideoligopeptide ABC transporter substrate-binding protein precursor\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_06001 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_06209 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_06514 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_06548 peptide ABC transporter substrate-binding protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_01681 appB; Oligopeptide transport system permease protein AppB\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_02079 ABC transporter permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_02261 dppB3; dipeptide transport system permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_02389 putative peptide ABC transporter permease protein y4tP\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_02444 peptide transport system permease ABC transporter protein\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_02675 peptide ABC transporter permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_02822 transport system permease ABC transporter protein\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_03577 ABC transporter integral membrane protein\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_03757 binding-protein-dependent transport systems inner membrane component\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_03774 putative transmembrane ABC transporter\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_03796 ABC transporter permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_03920 putative peptide ABC transporter permease protein y4tP\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_03927 dppB; Dipeptide transport system permease protein dppB\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_04326 oligopeptidemurein peptide ABC transporter permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_04487 ABC transporter permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_04521 ABC transporter\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_04631 ABC transporter integral membrane protein\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_04766 ABC transporter permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_05032 gsiC; Glutathione transport system permease protein gsiC\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_05889 mureinpeptideoligopeptide ABC transporter permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_06000 oligopeptidemurein peptide ABC transporter permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_06208 gsiC; Glutathione transport system permease protein gsiC\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_06515 oligopeptide ABC transporter permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_06547 peptide ABC transporter permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_01682 peptide transport system permease ABC transporter protein\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_02080 ABC transporter permease\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_02260 ddpC; putative D,D-dipeptide transport system permease protein ddpC\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_02388 dppC3; Dipeptide transport system permease protein dppC\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_02445 peptide transport system permease\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_02676 peptide ABC transporter permease\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_02821 transport system permease ABC transporter protein\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_03576 ABC transporter permease\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_03758 binding-protein-dependent transport systems inner membrane component\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_03775 binding-protein-dependent transport systems inner membrane component\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_03797 ABC transporter permease\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_03921 putative peptide ABC transporter permease protein y4tQ\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_03926 ABC transporter permease\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_04325 ABC transporter\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_04486 ABC transporter integral membrane protein\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_04520 ABC transporter permease\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_04630 ABC transporter\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_04767 ABC transporter permease\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_05031 dppC; Dipeptide transport system permease protein dppC\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_05888 ABC transporter\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_05999 ABC transporter\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_06207 nickel-transporting ATPase\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_06516 ABC transporter\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_06546 putative oligopeptide ABC transporter permease\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_01678 gsiA1; Glutathione import ATP-binding protein GsiA\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_02081 ABC transporter ATP-binding protein\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_02259 oppD1; Oligopeptide transport ATP-binding protein OppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_02387 gsiA3; Glutathione import ATP-binding protein GsiA\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_02448 oppD3; Oligopeptide transport ATP-binding protein OppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_02677 gsiA5; Glutathione import ATP-binding protein GsiA\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_02824 oppD5; Oligopeptide transport ATP-binding protein OppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_03575 oligopeptide\/dipeptide ABC transporter ATPase\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_03754 oppD1; Oligopeptide transport ATP-binding protein OppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_03776 oppD3; Oligopeptide transport ATP-binding protein OppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_03798 appD; Oligopeptide transport ATP-binding protein AppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_03922 gsiA1; Glutathione import ATP-binding protein GsiA\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_03925 gsiA3; Glutathione import ATP-binding protein GsiA\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_04324 Nickel-transporting ATPase, Molybdate-transporting ATPase\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_04485 oppD5; Oligopeptide transport ATP-binding protein OppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_04519 gsiA5; Glutathione import ATP-binding protein GsiA\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_04629 oppD7; Oligopeptide transport ATP-binding protein OppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_04768 ABC transporter ATP-binding protein\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_05030 putative peptide ABC transporter ATP-binding protein y4tR\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_05891 gsiA1; Glutathione import ATP-binding protein GsiA\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_05998 Nickel-transporting ATPase, Molybdate-transporting ATPase\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_06517 gsiA3; Glutathione import ATP-binding protein GsiA\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_06545 gsiA5; Glutathione import ATP-binding protein GsiA\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_02258 ykfD; Putative oligopeptide transport ATP-binding protein YkfD\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_02449 appF1; Oligopeptide transport ATP-binding protein AppF\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_02823 appF3; Oligopeptide transport ATP-binding protein AppF\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_03777 appF1; Oligopeptide transport ATP-binding protein AppF\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_03799 appF3; Oligopeptide transport ATP-binding protein AppF\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_04484 appF5; Oligopeptide transport ATP-binding protein AppF\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_04628 Putative peptide import ATP-binding protein BMEII0864\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_05029 gsiA7; Glutathione import ATP-binding protein GsiA\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_06206 appF; Oligopeptide transport ATP-binding protein AppF\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_00076 inner membrane protein translocase component YidC\tK03217 yidC; YidC\/Oxa1 family membrane protein insertase" }, { "name":"BN406_00204 secD2; bifunctional preprotein translocase subunit SecD\/SecF\tK12257 secDF; SecD\/SecF fusion protein" }, { "name":"BN406_01270 protein-export membrane protein SecD\tK12257 secDF; SecD\/SecF fusion protein" }, { "name":"BN406_01072 secE; preprotein translocase subunit SecE\tK03073 secE; preprotein translocase subunit SecE" }, { "name":"BN406_01171 secG; preprotein translocase subunit SecG\tK03075 secG; preprotein translocase subunit SecG" }, { "name":"BN406_01107 secY; preprotein translocase subunit SecY\tK03076 secY; preprotein translocase subunit SecY" }, { "name":"BN406_01269 YAJC protein\tK03210 yajC; preprotein translocase subunit YajC" }, { "name":"BN406_02485 secA; preprotein translocase subunit SecA\tK03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]" }, { "name":"BN406_03038 ftsY; Signal recognition particle receptor FtsY\tK03110 ftsY; fused signal recognition particle receptor" }, { "name":"BN406_03142 secB; preprotein translocase subunit SecB\tK03071 secB; preprotein translocase subunit SecB" }, { "name":"BN406_03041 ffh; Signal recognition particle protein\tK03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]" } ] }, { "name":"05111 Biofilm formation - Vibrio cholerae" }, { "name":"02025 Biofilm formation - Pseudomonas aeruginosa" }, { "name":"02026 Biofilm formation - Escherichia coli" } ] }, { "name":"09142 Cell motility", "children":[ { "name":"02030 Bacterial chemotaxis [PATH:smi02030]", "children":[ { "name":"BN406_00049 mcpX; chemoreceptor methyl-accepting chemotaxis transmembrane protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_00078 methyl-accepting chemotaxis sensory transducer\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_00252 mcpE; putative chemoreceptor mcpE\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_00324 putative chemoreceptor y4fA\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_00532 methyl-accepting chemotaxis sensory transducer with Cache sensor\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_01626 mcpV; chemoreceptor methyl-accepting chemotaxis transmembrane protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_01975 methyl-accepting chemotaxis sensory transducer\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_02861 methyl-accepting chemotaxis sensory transducer with Pas\/Pac sensor\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_04584 mcpS; Methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_00370 periplasmic binding protein\/LacI transcriptional regulator\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_02381 periplasmic binding ABC transporter protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_02393 putative periplasmic binding protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_02414 periplasmic binding ABC transporter protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_02996 periplasmic binding ABC transporter protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_03155 periplasmic binding protein\/LacI transcriptional regulator\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_04515 ABC transporter substrate-binding protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_04872 ABC transporter substrate-binding protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_04931 periplasmic binding protein\/LacI transcriptional regulator\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_04972 putative ABC transporter component\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_05115 sugar ABC transporter substrate-binding protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_05271 sugar uptake ABC transporter substrate-binding protein precursor\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_05321 sugar uptake ABC transporter substrate-binding protein precursor\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_05523 ABC transporter substrate-binding protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_05612 putative sugar uptake ABC transporter periplasmic solute-binding protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_05709 sugar uptake ABC transporter substrate-binding protein precursor\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_06179 putative ABC transporter periplasmic sugar-binding protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_06660 putative secreted protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_06674 putative secreted protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_00356 dppA; Periplasmic dipeptide transport protein\tK12368 dppA; dipeptide transport system substrate-binding protein" }, { "name":"BN406_00255 cheA; Chemotaxis protein CheA\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"BN406_04585 Sensor histidine kinase\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"BN406_00256 cheW; Chemotaxis protein CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"BN406_01974 cheW2; chemotaxis protein\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"BN406_02860 cheW3; chemotaxis protein\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"BN406_04583 CheW protein\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"BN406_00254 cheY1; chemotaxis regulator protein\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"BN406_00259 cheY; putative chemotaxis protein CheY\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"BN406_02576 2-component receiver domain protein\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"BN406_00258 cheB1; Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"BN406_04586 cheB3; Chemotaxis response regulator protein-glutamate methylesterase of group 3 operon\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"BN406_06170 CheB methylesterase\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"BN406_06169 putative methyltransferase\tK13924 cheBR; two-component system, chemotaxis family, CheB\/CheR fusion protein [EC:2.1.1.80 3.1.1.61]" }, { "name":"BN406_00260 cheD; chemoreceptor glutamine deamidase CheD\tK03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]" }, { "name":"BN406_00257 cheRch1; putative chemotaxis protein methyltransferase\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"BN406_04582 MCP methyltransferase CheR-type\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"BN406_00267 fliG; flagellar motor switch protein G\tK02410 fliG; flagellar motor switch protein FliG" }, { "name":"BN406_00269 fliM; flagellar motor switch transmembrane protein\tK02416 fliM; flagellar motor switch protein FliM" }, { "name":"BN406_00268 fliN; flagellar motor switch protein\tK02417 fliN; flagellar motor switch protein FliN" }, { "name":"BN406_00270 motA; flagellar motor protein MotA\tK02556 motA; chemotaxis protein MotA" }, { "name":"BN406_00290 motB; flagellar motor protein MotB\tK02557 motB; chemotaxis protein MotB" } ] }, { "name":"02040 Flagellar assembly [PATH:smi02040]", "children":[ { "name":"BN406_00277 fliE; flagellar hook-basal body protein FliE\tK02408 fliE; flagellar hook-basal body complex protein FliE" }, { "name":"BN406_00262 fliF; flagellar MS-ring protein\tK02409 fliF; flagellar M-ring protein FliF" }, { "name":"BN406_00267 fliG; flagellar motor switch protein G\tK02410 fliG; flagellar motor switch protein FliG" }, { "name":"BN406_00273 fliI; Flagellum-specific ATP synthase\tK02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]" }, { "name":"BN406_00283 fliL; flagellar transmembrane protein\tK02415 fliL; flagellar protein FliL" }, { "name":"BN406_00269 fliM; flagellar motor switch transmembrane protein\tK02416 fliM; flagellar motor switch protein FliM" }, { "name":"BN406_00268 fliN; flagellar motor switch protein\tK02417 fliN; flagellar motor switch protein FliN" }, { "name":"BN406_00284 fliP; flagellar biosynthesis protein FliP\tK02419 fliP; flagellar biosynthesis protein FliP" }, { "name":"BN406_00301 fliQ; flagellar biosynthesis protein FliQ\tK02420 fliQ; flagellar biosynthesis protein FliQ" }, { "name":"BN406_00303 fliR; flagellar biosynthesis protein FliR\tK02421 fliR; flagellar biosynthesis protein FliR" }, { "name":"BN406_00302 flhA; flagellar biosynthesis protein FlhA\tK02400 flhA; flagellar biosynthesis protein FlhA" }, { "name":"BN406_00266 flhB; flagellar biosynthesis protein FlhB\tK02401 flhB; flagellar biosynthesis protein FlhB" }, { "name":"BN406_00279 flgA; flagellar basal body P-ring biosynthesis protein FlgA\tK02386 flgA; flagellar basal body P-ring formation protein FlgA" }, { "name":"BN406_00275 flgB; flagellar basal body rod protein FlgB\tK02387 flgB; flagellar basal-body rod protein FlgB" }, { "name":"BN406_00276 flgC; Flagellar basal-body rod protein flgC\tK02388 flgC; flagellar basal-body rod protein FlgC" }, { "name":"BN406_00300 flgD; flagellar basal body rod modification protein\tK02389 flgD; flagellar basal-body rod modification protein FlgD" }, { "name":"BN406_00295 flgE; Flagellar hook protein flgE\tK02390 flgE; flagellar hook protein FlgE" }, { "name":"BN406_00272 flgF; Flagellar basal-body rod protein flgF\tK02391 flgF; flagellar basal-body rod protein FlgF" }, { "name":"BN406_00278 flgG; Flagellar basal-body rod protein flgG\tK02392 flgG; flagellar basal-body rod protein FlgG" }, { "name":"BN406_00282 flgH; flagellar basal body L-ring protein\tK02393 flgH; flagellar L-ring protein FlgH" }, { "name":"BN406_00280 flgI; flagellar basal body P-ring protein\tK02394 flgI; flagellar P-ring protein FlgI" }, { "name":"BN406_00305 hypothetical protein\tK02395 flgJ; peptidoglycan hydrolase FlgJ" }, { "name":"BN406_00296 flgK; flagellar hook-associated protein FlgK\tK02396 flgK; flagellar hook-associated protein 1" }, { "name":"BN406_00297 flgL; flagellar hook-associated protein FlgL\tK02397 flgL; flagellar hook-associated protein 3 FlgL" }, { "name":"BN406_00285 flaA; Flagellin A\tK02406 fliC; flagellin" }, { "name":"BN406_00286 flaB; Flagellin B\tK02406 fliC; flagellin" }, { "name":"BN406_00287 flaD; Flagellin D\tK02406 fliC; flagellin" }, { "name":"BN406_00288 flaC; Flagellin C\tK02406 fliC; flagellin" }, { "name":"BN406_00270 motA; flagellar motor protein MotA\tK02556 motA; chemotaxis protein MotA" }, { "name":"BN406_00290 motB; flagellar motor protein MotB\tK02557 motB; chemotaxis protein MotB" }, { "name":"BN406_00291 motC; chemotaxis protein\tK10564 motC; chemotaxis protein MotC" }, { "name":"BN406_00292 motD; chemotaxis protein (motility protein D)\tK10565 motD; chemotaxis protein MotD" }, { "name":"BN406_03074 putative amino-acid ABC transporter-binding protein HI_1080\tK02424 tcyA; L-cystine transport system substrate-binding protein" }, { "name":"BN406_02165 rpoD; RNA polymerase sigma factor rpoD\tK03086 rpoD; RNA polymerase primary sigma factor" }, { "name":"BN406_00014 rpoN; RNA polymerase sigma-54 factor\tK03092 rpoN; RNA polymerase sigma-54 factor" } ] }, { "name":"04814 Motor proteins" }, { "name":"04820 Cytoskeleton in muscle cells", "children":[ { "name":"BN406_01175 eno; phosphopyruvate hydratase\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]" } ] }, { "name":"04810 Regulation of actin cytoskeleton" } ] } ] }, { "name":"09150 Organismal Systems", "children":[ { "name":"09151 Immune system", "children":[ { "name":"04640 Hematopoietic cell lineage" }, { "name":"04610 Complement and coagulation cascades" }, { "name":"04611 Platelet activation" }, { "name":"04613 Neutrophil extracellular trap formation" }, { "name":"04620 Toll-like receptor signaling pathway" }, { "name":"04624 Toll and Imd signaling pathway" }, { "name":"04621 NOD-like receptor signaling pathway" }, { "name":"04622 RIG-I-like receptor signaling pathway" }, { "name":"04623 Cytosolic DNA-sensing pathway" }, { "name":"04625 C-type lectin receptor signaling pathway" }, { "name":"04650 Natural killer cell mediated cytotoxicity" }, { "name":"04612 Antigen processing and presentation" }, { "name":"04660 T cell receptor signaling pathway" }, { "name":"04658 Th1 and Th2 cell differentiation" }, { "name":"04659 Th17 cell differentiation" }, { "name":"04657 IL-17 signaling pathway" }, { "name":"04662 B cell receptor signaling pathway" }, { "name":"04664 Fc epsilon RI signaling pathway" }, { "name":"04666 Fc gamma R-mediated phagosome formation" }, { "name":"04670 Leukocyte transendothelial migration" }, { "name":"04672 Intestinal immune network for IgA production" }, { "name":"04062 Chemokine signaling pathway" } ] }, { "name":"09152 Endocrine system", "children":[ { "name":"04911 Insulin secretion" }, { "name":"04910 Insulin signaling pathway" }, { "name":"04922 Glucagon signaling pathway" }, { "name":"04923 Regulation of lipolysis in adipocytes" }, { "name":"04920 Adipocytokine signaling pathway" }, { "name":"03320 PPAR signaling pathway" }, { "name":"04929 GnRH secretion" }, { "name":"04912 GnRH signaling pathway" }, { "name":"04913 Ovarian steroidogenesis" }, { "name":"04915 Estrogen signaling pathway" }, { "name":"04914 Progesterone-mediated oocyte maturation" }, { "name":"04917 Prolactin signaling pathway" }, { "name":"04921 Oxytocin signaling pathway" }, { "name":"04926 Relaxin signaling pathway" }, { "name":"04935 Growth hormone synthesis, secretion and action" }, { "name":"04918 Thyroid hormone synthesis" }, { "name":"04919 Thyroid hormone signaling pathway" }, { "name":"04928 Parathyroid hormone synthesis, secretion and action" }, { "name":"04916 Melanogenesis" }, { "name":"04924 Renin secretion" }, { "name":"04614 Renin-angiotensin system" }, { "name":"04925 Aldosterone synthesis and secretion" }, { "name":"04927 Cortisol synthesis and secretion" } ] }, { "name":"09153 Circulatory system", "children":[ { "name":"04260 Cardiac muscle contraction" }, { "name":"04261 Adrenergic signaling in cardiomyocytes" }, { "name":"04270 Vascular smooth muscle contraction" } ] }, { "name":"09154 Digestive system", "children":[ { "name":"04970 Salivary secretion" }, { "name":"04971 Gastric acid secretion" }, { "name":"04972 Pancreatic secretion" }, { "name":"04976 Bile secretion" }, { "name":"04973 Carbohydrate digestion and absorption" }, { "name":"04974 Protein digestion and absorption" }, { "name":"04975 Fat digestion and absorption" }, { "name":"04979 Cholesterol metabolism" }, { "name":"04977 Vitamin digestion and absorption" }, { "name":"04981 Folate transport and metabolism [PATH:smi04981]", "children":[ { "name":"BN406_02615 5-formyltetrahydrofolate cyclo-ligase\tK01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]" }, { "name":"BN406_03210 hypothetical protein\tK01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]" }, { "name":"BN406_01948 folA; dihydrofolate reductase\tK00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]" }, { "name":"BN406_00943 glyA1; Serine hydroxymethyltransferase 1\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" }, { "name":"BN406_01950 thyA; thymidylate synthase\tK00560 thyA; thymidylate synthase [EC:2.1.1.45]" }, { "name":"BN406_01701 methionine synthase I\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"BN406_01716 methyltetrahydrofolate:corrinoid\/iron-sulfur protein methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"BN406_02836 metH; Methionine synthase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" } ] }, { "name":"04980 Cobalamin transport and metabolism [PATH:smi04980]", "children":[ { "name":"BN406_02499 hypothetical protein\tK00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]" }, { "name":"BN406_05249 bhbA; methylmalonyl-CoA mutase\tK01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]" }, { "name":"BN406_01701 methionine synthase I\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"BN406_01716 methyltetrahydrofolate:corrinoid\/iron-sulfur protein methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"BN406_02836 metH; Methionine synthase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" } ] }, { "name":"04978 Mineral absorption" } ] }, { "name":"09155 Excretory system", "children":[ { "name":"04962 Vasopressin-regulated water reabsorption" }, { "name":"04960 Aldosterone-regulated sodium reabsorption" }, { "name":"04961 Endocrine and other factor-regulated calcium reabsorption" }, { "name":"04964 Proximal tubule bicarbonate reclamation" }, { "name":"04966 Collecting duct acid secretion" } ] }, { "name":"09156 Nervous system", "children":[ { "name":"04724 Glutamatergic synapse" }, { "name":"04727 GABAergic synapse" }, { "name":"04725 Cholinergic synapse" }, { "name":"04728 Dopaminergic synapse" }, { "name":"04726 Serotonergic synapse" }, { "name":"04720 Long-term potentiation" }, { "name":"04730 Long-term depression" }, { "name":"04723 Retrograde endocannabinoid signaling" }, { "name":"04721 Synaptic vesicle cycle" }, { "name":"04722 Neurotrophin signaling pathway" } ] }, { "name":"09157 Sensory system", "children":[ { "name":"04744 Phototransduction" }, { "name":"04745 Phototransduction - fly" }, { "name":"04740 Olfactory transduction" }, { "name":"04742 Taste transduction" }, { "name":"04750 Inflammatory mediator regulation of TRP channels" } ] }, { "name":"09158 Development and regeneration", "children":[ { "name":"04320 Dorso-ventral axis formation" }, { "name":"04360 Axon guidance" }, { "name":"04361 Axon regeneration" }, { "name":"04380 Osteoclast differentiation" }, { "name":"04382 Cornified envelope formation", "children":[ { "name":"BN406_02560 hutH; Histidine ammonia-lyase\tK01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]" }, { "name":"BN406_03581 Histidine ammonia-lyase\tK01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]" }, { "name":"BN406_05826 hutH; Histidine ammonia-lyase\tK01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]" } ] } ] }, { "name":"09149 Aging", "children":[ { "name":"04211 Longevity regulating pathway" }, { "name":"04212 Longevity regulating pathway - worm" }, { "name":"04213 Longevity regulating pathway - multiple species" } ] }, { "name":"09159 Environmental adaptation", "children":[ { "name":"04710 Circadian rhythm" }, { "name":"04713 Circadian entrainment" }, { "name":"04711 Circadian rhythm - fly" }, { "name":"04712 Circadian rhythm - plant" }, { "name":"04714 Thermogenesis" }, { "name":"04626 Plant-pathogen interaction" } ] } ] }, { "name":"09160 Human Diseases", "children":[ { "name":"09161 Cancer: overview", "children":[ { "name":"05200 Pathways in cancer" }, { "name":"05202 Transcriptional misregulation in cancer" }, { "name":"05206 MicroRNAs in cancer" }, { "name":"05205 Proteoglycans in cancer" }, { "name":"05204 Chemical carcinogenesis - DNA adducts" }, { "name":"05207 Chemical carcinogenesis - receptor activation" }, { "name":"05208 Chemical carcinogenesis - reactive oxygen species" }, { "name":"05203 Viral carcinogenesis" }, { "name":"05230 Central carbon metabolism in cancer" }, { "name":"05231 Choline metabolism in cancer" }, { "name":"05235 PD-L1 expression and PD-1 checkpoint pathway in cancer" } ] }, { "name":"09162 Cancer: specific types", "children":[ { "name":"05210 Colorectal cancer" }, { "name":"05212 Pancreatic cancer" }, { "name":"05225 Hepatocellular carcinoma" }, { "name":"05226 Gastric cancer" }, { "name":"05214 Glioma" }, { "name":"05216 Thyroid cancer" }, { "name":"05221 Acute myeloid leukemia" }, { "name":"05220 Chronic myeloid leukemia" }, { "name":"05217 Basal cell carcinoma" }, { "name":"05218 Melanoma" }, { "name":"05211 Renal cell carcinoma" }, { "name":"05219 Bladder cancer" }, { "name":"05215 Prostate cancer" }, { "name":"05213 Endometrial cancer" }, { "name":"05224 Breast cancer" }, { "name":"05222 Small cell lung cancer" }, { "name":"05223 Non-small cell lung cancer" } ] }, { "name":"09172 Infectious disease: viral", "children":[ { "name":"05166 Human T-cell leukemia virus 1 infection" }, { "name":"05170 Human immunodeficiency virus 1 infection" }, { "name":"05161 Hepatitis B" }, { "name":"05160 Hepatitis C" }, { "name":"05171 Coronavirus disease" }, { "name":"05164 Influenza A" }, { "name":"05162 Measles" }, { "name":"05168 Herpes simplex virus 1 infection" }, { "name":"05163 Human cytomegalovirus infection" }, { "name":"05167 Kaposi sarcoma-associated herpesvirus infection" }, { "name":"05169 Epstein-Barr virus infection" }, { "name":"05165 Human papillomavirus infection" } ] }, { "name":"09171 Infectious disease: bacterial", "children":[ { "name":"05110 Vibrio cholerae infection" }, { "name":"05120 Epithelial cell signaling in Helicobacter pylori infection" }, { "name":"05130 Pathogenic Escherichia coli infection" }, { "name":"05132 Salmonella infection" }, { "name":"05131 Shigellosis" }, { "name":"05135 Yersinia infection" }, { "name":"05133 Pertussis" }, { "name":"05134 Legionellosis" }, { "name":"05150 Staphylococcus aureus infection" }, { "name":"05152 Tuberculosis" }, { "name":"05100 Bacterial invasion of epithelial cells" } ] }, { "name":"09174 Infectious disease: parasitic", "children":[ { "name":"05146 Amoebiasis" }, { "name":"05144 Malaria" }, { "name":"05145 Toxoplasmosis" }, { "name":"05140 Leishmaniasis" }, { "name":"05142 Chagas disease" }, { "name":"05143 African trypanosomiasis" } ] }, { "name":"09163 Immune disease", "children":[ { "name":"05310 Asthma" }, { "name":"05322 Systemic lupus erythematosus" }, { "name":"05323 Rheumatoid arthritis" }, { "name":"05320 Autoimmune thyroid disease" }, { "name":"05321 Inflammatory bowel disease" }, { "name":"05330 Allograft rejection" }, { "name":"05332 Graft-versus-host disease" }, { "name":"05340 Primary immunodeficiency" } ] }, { "name":"09164 Neurodegenerative disease", "children":[ { "name":"05010 Alzheimer disease" }, { "name":"05012 Parkinson disease" }, { "name":"05014 Amyotrophic lateral sclerosis" }, { "name":"05016 Huntington disease" }, { "name":"05017 Spinocerebellar ataxia" }, { "name":"05020 Prion disease" }, { "name":"05022 Pathways of neurodegeneration - multiple diseases" } ] }, { "name":"09165 Substance dependence", "children":[ { "name":"05030 Cocaine addiction" }, { "name":"05031 Amphetamine addiction" }, { "name":"05032 Morphine addiction" }, { "name":"05033 Nicotine addiction" }, { "name":"05034 Alcoholism" } ] }, { "name":"09166 Cardiovascular disease", "children":[ { "name":"05417 Lipid and atherosclerosis" }, { "name":"05418 Fluid shear stress and atherosclerosis" }, { "name":"05410 Hypertrophic cardiomyopathy" }, { "name":"05412 Arrhythmogenic right ventricular cardiomyopathy" }, { "name":"05414 Dilated cardiomyopathy" }, { "name":"05415 Diabetic cardiomyopathy" }, { "name":"05416 Viral myocarditis" } ] }, { "name":"09167 Endocrine and metabolic disease", "children":[ { "name":"04930 Type II diabetes mellitus" }, { "name":"04940 Type I diabetes mellitus" }, { "name":"04950 Maturity onset diabetes of the young" }, { "name":"04936 Alcoholic liver disease" }, { "name":"04932 Non-alcoholic fatty liver disease" }, { "name":"04931 Insulin resistance" }, { "name":"04933 AGE-RAGE signaling pathway in diabetic complications" }, { "name":"04934 Cushing syndrome" } ] }, { "name":"09175 Drug resistance: antimicrobial", "children":[ { "name":"01501 beta-Lactam resistance [PATH:smi01501]", "children":[ { "name":"BN406_01256 hydrolase glycosidase\tK01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]" }, { "name":"BN406_03553 ampR; HTH-type transcriptional activator AmpR\tK17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase" }, { "name":"BN406_05625 ampC; beta-lactamase\tK01467 ampC; beta-lactamase class C [EC:3.5.2.6]" }, { "name":"BN406_05799 oppA; oligopeptide uptake ABC transporter substrate-binding protein precursor\tK15580 oppA; oligopeptide transport system substrate-binding protein" }, { "name":"BN406_05798 oppB; Oligopeptide transport system permease protein oppB\tK15581 oppB; oligopeptide transport system permease protein" }, { "name":"BN406_05797 ABC transporter\tK15582 oppC; oligopeptide transport system permease protein" }, { "name":"BN406_05796 yejF3; putative ABC transporter ATP-binding protein YejF\tK10823 oppF; oligopeptide transport system ATP-binding protein" }, { "name":"BN406_00637 blaP; Beta-lactamase\tK17836 penP; beta-lactamase class A [EC:3.5.2.6]" }, { "name":"BN406_02386 putative beta-lactamase protein\tK17836 penP; beta-lactamase class A [EC:3.5.2.6]" }, { "name":"BN406_04841 blaP; Beta-lactamase\tK17836 penP; beta-lactamase class A [EC:3.5.2.6]" }, { "name":"BN406_04842 beta-lactamase\tK17836 penP; beta-lactamase class A [EC:3.5.2.6]" }, { "name":"BN406_01963 transporter\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_02310 transport transmembrane protein\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_03323 RND family efflux transporter MFP subunit\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_04279 nolF; Nodulation protein nolF\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_04639 bepF; Efflux pump periplasmic linker BepF\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_05369 RND family efflux transporter MFP subunit\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_01962 transport transmembrane protein\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_02311 transport transmembrane protein\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_03322 acrB; Acriflavine resistance protein B\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_04278 nolG; Nodulation protein nolG\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_04638 bepG; Efflux pump membrane transporter BepG\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_05368 bepG; Efflux pump membrane transporter BepG\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_01245 tolC; outer membrane secretion protein\tK12340 tolC; outer membrane protein" }, { "name":"BN406_00667 penicillin-binding protein 1A family\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"BN406_01060 mrcA; Penicillin-binding protein 1A\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"BN406_03311 penicillin-binding protein\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"BN406_03552 mrcA; Penicillin-binding protein 1A\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"BN406_04813 mrcB; MrcB penicillin binding protein B\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"BN406_02005 ftsI; penicillin-binding transmembrane protein\tK03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]" }, { "name":"BN406_03551 peptidoglycan glycosyltransferase\tK03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]" }, { "name":"BN406_03321 transcription regulator protein\tK03577 acrR; TetR\/AcrR family transcriptional regulator, acrAB operon repressor" } ] }, { "name":"01502 Vancomycin resistance [PATH:smi01502]", "children":[ { "name":"BN406_01994 ddl; D-alanine--D-alanine ligase\tK01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]" }, { "name":"BN406_00863 alr; Alanine racemase\tK01775 alr; alanine racemase [EC:5.1.1.1]" }, { "name":"BN406_06684 dadX; Alanine racemase, catabolic\tK01775 alr; alanine racemase [EC:5.1.1.1]" }, { "name":"BN406_02003 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate\/D-alanyl-D-alanyl ligase\tK01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]" }, { "name":"BN406_02002 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase\tK01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]" }, { "name":"BN406_01999 murG; UDPdiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase\tK02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]" } ] }, { "name":"01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:smi01503]", "children":[ { "name":"BN406_05782 hypothetical protein\tK03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]" }, { "name":"BN406_01456 hemolysin-type calcium-binding protein\tK01406 prtC; serralysin [EC:3.4.24.40]" }, { "name":"BN406_05066 serralysin\tK01406 prtC; serralysin [EC:3.4.24.40]" }, { "name":"BN406_05370 putative protease protein\tK01406 prtC; serralysin [EC:3.4.24.40]" }, { "name":"BN406_01059 amiC; N-acetylmuramoyl-L-alanine amidase AMIC precursor transmembrane protein\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"BN406_00437 ErfK\/YbiS\/YcfS\/YnhG family protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"BN406_00438 hypothetical protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"BN406_00617 hypothetical protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"BN406_00822 ErfK\/YbiS\/YcfS\/YnhG family protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"BN406_01327 ErfK\/YbiS\/YcfS\/YnhG family protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"BN406_01884 hypothetical protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"BN406_03197 ErfK\/YbiS\/YcfS\/YnhG family protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"BN406_00679 degP1; putative periplasmic serine endoprotease DegP-like\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"BN406_01943 degP2; protease precursor signal peptide protein\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"BN406_01963 transporter\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_02310 transport transmembrane protein\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_03323 RND family efflux transporter MFP subunit\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_04279 nolF; Nodulation protein nolF\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_04639 bepF; Efflux pump periplasmic linker BepF\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_05369 RND family efflux transporter MFP subunit\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_01962 transport transmembrane protein\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_02311 transport transmembrane protein\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_03322 acrB; Acriflavine resistance protein B\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_04278 nolG; Nodulation protein nolG\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_04638 bepG; Efflux pump membrane transporter BepG\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_05368 bepG; Efflux pump membrane transporter BepG\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_01245 tolC; outer membrane secretion protein\tK12340 tolC; outer membrane protein" }, { "name":"BN406_01237 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase\tK00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]" }, { "name":"BN406_00915 Lysylphosphatidylglycerol synthetase\tK14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]" } ] } ] }, { "name":"09176 Drug resistance: antineoplastic", "children":[ { "name":"01521 EGFR tyrosine kinase inhibitor resistance" }, { "name":"01524 Platinum drug resistance" }, { "name":"01523 Antifolate resistance" }, { "name":"01522 Endocrine resistance" } ] } ] }, { "name":"09180 Brite Hierarchies", "children":[ { "name":"09181 Protein families: metabolism", "children":[ { "name":"01000 Enzymes [BR:smi01000]" }, { "name":"01001 Protein kinases [BR:smi01001]", "children":[ { "name":"BN406_02154 Protein kinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"BN406_02155 Protein kinase\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"BN406_00970 lipopolysaccharide biosynthesis protein\tK16692 etk-wzc; tyrosine-protein kinase Etk\/Wzc [EC:2.7.10.3]" }, { "name":"BN406_05583 exoP; Succinoglycan biosynthesis transport protein exoP\tK16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]" }, { "name":"BN406_06088 Cobyrinic acid ac-diamide synthase\tK00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]" }, { "name":"BN406_00142 phoR; phosphate regulon sensor histidine kinase transmembrane protein\tK07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]" }, { "name":"BN406_02188 sensor histidine kinase transmembrane protein\tK07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]" }, { "name":"BN406_03538 KdpD histidine kinase\tK07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]" }, { "name":"BN406_05270 two-component sensor histidine kinase\tK07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]" }, { "name":"BN406_03177 chvG; Sensor protein ChvG\tK14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]" }, { "name":"BN406_01190 ntrB; Nitrogen regulation protein ntrB\tK07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]" }, { "name":"BN406_01192 ntrY; Nitrogen regulation protein ntrY\tK13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]" }, { "name":"BN406_05184 dctB; C4-dicarboxylate transport sensor protein dctB\tK10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]" }, { "name":"BN406_05793 two-component sensor histidine kinase\tK10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]" }, { "name":"BN406_00255 cheA; Chemotaxis protein CheA\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"BN406_04585 Sensor histidine kinase\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"BN406_00683 multi-sensor signal transduction histidine kinase\tK07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]" }, { "name":"BN406_01615 sensor histidine kinase transmembrane protein\tK07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]" }, { "name":"BN406_00658 putative sensor-like histidine kinase R01002\tK11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]" }, { "name":"BN406_01536 sensor histidine kinase transmembrane protein\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"BN406_04389 fixL; Sensor protein fixL\tK14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]" }, { "name":"BN406_03200 actS; sensor histidine kinase transmembrane protein\tK15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]" } ] }, { "name":"01009 Protein phosphatases and associated proteins [BR:smi01009]", "children":[ { "name":"BN406_03173 ahcY; S-adenosyl-L-homocysteine hydrolase\tK01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]" }, { "name":"BN406_05809 htpG; molecular chaperone HtpG\tK04079 HSP90A; molecular chaperone HtpG" }, { "name":"BN406_02156 unnamed protein product\tK20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]" }, { "name":"BN406_01941 serB; phosphoserine phosphatase\tK01079 serB; phosphoserine phosphatase [EC:3.1.3.3]" } ] }, { "name":"01002 Peptidases and inhibitors [BR:smi01002]", "children":[ { "name":"BN406_00024 lspA; lipoprotein signal peptidase\tK03101 lspA; signal peptidase II [EC:3.4.23.36]" }, { "name":"BN406_03272 cpaA1; pilus assembly transmembrane protein\tK02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]" }, { "name":"BN406_04594 peptidase A24A prepilin type IV\tK02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]" }, { "name":"BN406_02940 glutamine amidotransferase\tK01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]" }, { "name":"BN406_03445 guaA; GMP synthase [glutamine-hydrolyzing]\tK01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]" }, { "name":"BN406_02721 hypothetical protein\tK07010 K07010; putative glutamine amidotransferase" }, { "name":"BN406_00860 purF; Amidophosphoribosyltransferase\tK00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]" }, { "name":"BN406_02669 gltB; Ferredoxin-dependent glutamate synthase 1\tK00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]" }, { "name":"BN406_01408 glmS; Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]" }, { "name":"BN406_03332 hypothetical protein\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]" }, { "name":"BN406_04280 glmS; Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]" }, { "name":"BN406_05340 asparagine synthase\tK01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]" }, { "name":"BN406_06204 asnO; protein AsnO\tK01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]" }, { "name":"BN406_04930 hypothetical protein\tK05520 yhbO; deglycase [EC:3.5.1.124]" }, { "name":"BN406_00437 ErfK\/YbiS\/YcfS\/YnhG family protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"BN406_00438 hypothetical protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"BN406_00617 hypothetical protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"BN406_00822 ErfK\/YbiS\/YcfS\/YnhG family protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"BN406_01327 ErfK\/YbiS\/YcfS\/YnhG family protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"BN406_01884 hypothetical protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"BN406_03197 ErfK\/YbiS\/YcfS\/YnhG family protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"BN406_00942 hypothetical protein\tK21470 ldtD; L,D-transpeptidase" }, { "name":"BN406_01592 hypothetical protein\tK21470 ldtD; L,D-transpeptidase" }, { "name":"BN406_02541 lipoprotein\tK28919 dpaA; peptidoglycan meso-diaminopimelic acid protein amidase A [EC:3.4.-.-]" }, { "name":"BN406_03745 unnamed protein product\tK07052 K07052; CAAX protease family protein" }, { "name":"BN406_00684 pepN; aminopeptidase N\tK01256 pepN; aminopeptidase N [EC:3.4.11.2]" }, { "name":"BN406_03104 dcp; peptidyl-dipeptidase A protein\tK01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]" }, { "name":"BN406_02654 pepF; oligoendopeptidase F protein\tK08602 pepF; oligoendopeptidase F [EC:3.4.24.-]" }, { "name":"BN406_01456 hemolysin-type calcium-binding protein\tK01406 prtC; serralysin [EC:3.4.24.40]" }, { "name":"BN406_05066 serralysin\tK01406 prtC; serralysin [EC:3.4.24.40]" }, { "name":"BN406_05370 putative protease protein\tK01406 prtC; serralysin [EC:3.4.24.40]" }, { "name":"BN406_00890 pepA; putative cytosol aminopeptidase\tK01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]" }, { "name":"BN406_03282 peptidase M17 leucyl aminopeptidase domain-containing protein\tK01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]" }, { "name":"BN406_02263 putative dipeptidase protein\tK01273 DPEP; membrane dipeptidase [EC:3.4.13.19]" }, { "name":"BN406_06288 peptidase M19\tK01273 DPEP; membrane dipeptidase [EC:3.4.13.19]" }, { "name":"BN406_00056 dapE; Succinyl-diaminopimelate desuccinylase\tK01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]" }, { "name":"BN406_04322 Peptidase T-like protein RB0614\tK01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]" }, { "name":"BN406_05996 Peptidase T-like protein RB0614\tK01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]" }, { "name":"BN406_00195 hipO1; Hippurate hydrolase\tK01451 hipO; hippurate hydrolase [EC:3.5.1.32]" }, { "name":"BN406_02384 abgB; p-aminobenzoyl-glutamate hydrolase subunit B\tK12941 abgB; aminobenzoyl-glutamate utilization protein B" }, { "name":"BN406_03699 hypothetical protein\tK12941 abgB; aminobenzoyl-glutamate utilization protein B" }, { "name":"BN406_01469 map; Methionine aminopeptidase\tK01265 map; methionyl aminopeptidase [EC:3.4.11.18]" }, { "name":"BN406_05544 map; Methionine aminopeptidase\tK01265 map; methionyl aminopeptidase [EC:3.4.11.18]" }, { "name":"BN406_01980 aminopeptidase P protein\tK01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]" }, { "name":"BN406_03433 aminopeptidase\tK19689 ampS; aminopeptidase [EC:3.4.11.-]" }, { "name":"BN406_02592 ftsH; ATP-dependent zinc metalloprotease FtsH\tK03798 ftsH; cell division protease FtsH [EC:3.4.24.-]" }, { "name":"BN406_03120 htpX; heat shock protein HtpX\tK03799 htpX; heat shock protein HtpX [EC:3.4.24.-]" }, { "name":"BN406_01233 hypothetical protein\tK11749 rseP; regulator of sigma E protease [EC:3.4.24.-]" }, { "name":"BN406_03290 mepA; penicillin-insensitive murein endopeptidase\tK07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]" }, { "name":"BN406_00679 degP1; putative periplasmic serine endoprotease DegP-like\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"BN406_01943 degP2; protease precursor signal peptide protein\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"BN406_03717 hypothetical protein\tK13274 wprA; cell wall-associated protease [EC:3.4.21.-]" }, { "name":"BN406_03752 Prolyl endopeptidase\tK01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]" }, { "name":"BN406_00641 oligopeptidase B\tK01354 ptrB; oligopeptidase B [EC:3.4.21.83]" }, { "name":"BN406_00548 hypothetical protein\tK07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5\/6) [EC:3.4.16.4]" }, { "name":"BN406_01143 serine-type D-Ala-D-Ala carboxypeptidase\tK07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5\/6) [EC:3.4.16.4]" }, { "name":"BN406_01340 dac; penicillin-binding precursor (D-alanyl-D-alanine carboxypeptidase fraction A) transmembrane protein\tK07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5\/6) [EC:3.4.16.4]" }, { "name":"BN406_00990 clpP2; ATP-dependent Clp protease proteolytic subunit 2\tK01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]" }, { "name":"BN406_02231 clpP3; ATP-dependent Clp protease proteolytic subunit 3\tK01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]" }, { "name":"BN406_03025 clpP1; ATP-dependent Clp protease proteolytic subunit 1\tK01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]" }, { "name":"BN406_00992 lon; Lon protease\tK01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]" }, { "name":"BN406_01347 lexA; LexA repressor\tK01356 lexA; repressor LexA [EC:3.4.21.88]" }, { "name":"BN406_00806 lepB; signal peptidase I transmembrane protein\tK03100 lepB; signal peptidase I [EC:3.4.21.89]" }, { "name":"BN406_00851 pip; Proline iminopeptidase\tK01259 pip; proline iminopeptidase [EC:3.4.11.5]" }, { "name":"BN406_02674 pip3; proline iminopeptidase\tK01259 pip; proline iminopeptidase [EC:3.4.11.5]" }, { "name":"BN406_04899 ephA; epoxide hydrolase\tK27108 ephA_B; epoxide hydrolase A\/B [EC:3.3.2.-]" }, { "name":"BN406_02964 ctpA; Carboxy-terminal-processing protease\tK03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]" }, { "name":"BN406_00018 protease IV transmembrane protein\tK04773 sppA; protease IV [EC:3.4.21.-]" }, { "name":"BN406_02500 hypothetical protein\tK07059 rho2; rhomboid family protease [EC:3.4.21.105]" }, { "name":"BN406_00087 unnamed protein product\tK06904 GP4; Escherichia\/Staphylococcus phage prohead protease" }, { "name":"BN406_03190 hslV; ATP-dependent protease peptidase subunit\tK01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]" }, { "name":"BN406_03773 putative acylase\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]" }, { "name":"BN406_05209 ggt; Gamma-glutamyltranspeptidase\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]" }, { "name":"BN406_04426 Peptidase\tK24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15]" }, { "name":"BN406_04425 Protease\tK24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15]" }, { "name":"BN406_00463 pmbA; PMBA protein\tK03592 pmbA; PmbA protein" }, { "name":"BN406_00547 tldD; Protein tldD homolog\tK03568 tldD; TldD protein" }, { "name":"BN406_05856 hypothetical protein\tK06894 yfhM; alpha-2-macroglobulin" }, { "name":"BN406_01946 hflC; hydrolase serine protease transmembrane protein\tK04087 hflC; modulator of FtsH protease HflC" }, { "name":"BN406_01947 hflK; membrane bound protease\tK04088 hflK; modulator of FtsH protease HflK" } ] }, { "name":"01003 Glycosyltransferases [BR:smi01003]", "children":[ { "name":"BN406_02702 glgA1; Glycogen synthase 1\tK00703 glgA; starch synthase [EC:2.4.1.21]" }, { "name":"BN406_05289 glgA2; Glycogen synthase 2\tK00703 glgA; starch synthase [EC:2.4.1.21]" }, { "name":"BN406_04271 nodC; N-acetylglucosaminyltransferase\tK14666 nodC; N-acetylglucosaminyltransferase [EC:2.4.1.-]" }, { "name":"BN406_03067 mtgA; Monofunctional biosynthetic peptidoglycan transglycosylase\tK03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"BN406_05857 pbpC; bifunctional penicillin-binding protein\tK05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]" }, { "name":"BN406_00667 penicillin-binding protein 1A family\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"BN406_01060 mrcA; Penicillin-binding protein 1A\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"BN406_03311 penicillin-binding protein\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"BN406_03552 mrcA; Penicillin-binding protein 1A\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"BN406_04813 mrcB; MrcB penicillin binding protein B\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"BN406_02000 ftsW; cell division protein FtsW\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"BN406_03082 ndvB; Protein ndvB\tK13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]" }, { "name":"BN406_05587 exoA; Succinoglycan biosynthesis protein exoA\tK16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]" }, { "name":"BN406_05588 exoL; glucosyltransferase\tK16558 exoL; succinoglycan biosynthesis protein ExoL [EC:2.-.-.-]" }, { "name":"BN406_05586 exoM; Succinoglycan biosynthesis protein exoM\tK16556 exoM; succinoglycan biosynthesis protein ExoM [EC:2.4.-.-]" }, { "name":"BN406_05585 exoO; Succinoglycan biosynthesis protein exoO\tK16555 exoO; succinoglycan biosynthesis protein ExoO [EC:2.4.-.-]" }, { "name":"BN406_05596 exoU; Succinoglycan biosynthesis protein exoU\tK16564 exoU; succinoglycan biosynthesis protein ExoU [EC:2.4.-.-]" }, { "name":"BN406_06804 exoU; Succinoglycan biosynthesis protein exoU\tK16564 exoU; succinoglycan biosynthesis protein ExoU [EC:2.4.-.-]" }, { "name":"BN406_05594 exoW; Succinoglycan biosynthesis protein exoW\tK16562 exoW; succinoglycan biosynthesis protein ExoW [EC:2.4.-.-]" }, { "name":"BN406_04951 otsA; OtsA trehalose-6-phosphate synthase\tK00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]" } ] }, { "name":"01005 Lipopolysaccharide biosynthesis proteins [BR:smi01005]", "children":[ { "name":"BN406_01237 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase\tK00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]" }, { "name":"BN406_01239 lpxB; lipid-A-disaccharide synthase\tK00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]" }, { "name":"BN406_01990 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase\tK02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]" }, { "name":"BN406_01235 lpxD; UDP-3-O-acylglucosamine N-acyltransferase\tK02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]" }, { "name":"BN406_01238 hypothetical protein\tK09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]" }, { "name":"BN406_00468 lpxK; tetraacyldisaccharide 4'-kinase\tK00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]" }, { "name":"BN406_01666 msbB; lipid A biosynthesis lauroyl acyltransferase\tK02517 lpxL; Kdo2-lipid IVA lauroyltransferase\/acyltransferase [EC:2.3.1.241 2.3.1.-]" }, { "name":"BN406_00466 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase\tK02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]" }, { "name":"BN406_01510 hypothetical protein\tK12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]" }, { "name":"BN406_05782 hypothetical protein\tK03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]" }, { "name":"BN406_01174 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase\tK01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]" }, { "name":"BN406_03354 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase\tK00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]" }, { "name":"BN406_00207 putative phosphosugar isomerase aq_1546\tK06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]" }, { "name":"BN406_06123 putative phosphosugar isomerase aq_1546\tK06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]" }, { "name":"BN406_01305 lpsB; Lipopolysaccharide core biosynthesis mannosyltransferase lpsB\tK12989 lpcC; mannosyltransferase [EC:2.4.1.-]" } ] }, { "name":"01011 Peptidoglycan biosynthesis and degradation proteins [BR:smi01011]", "children":[ { "name":"BN406_00226 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase\tK00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]" }, { "name":"BN406_01997 murB; UDP-N-acetylenolpyruvoylglucosamine reductase\tK00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]" }, { "name":"BN406_01998 murC; UDP-N-acetylmuramate--L-alanine ligase\tK01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]" }, { "name":"BN406_02001 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase\tK01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]" }, { "name":"BN406_02004 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase\tK01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]" }, { "name":"BN406_01994 ddl; D-alanine--D-alanine ligase\tK01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]" }, { "name":"BN406_00863 alr; Alanine racemase\tK01775 alr; alanine racemase [EC:5.1.1.1]" }, { "name":"BN406_06684 dadX; Alanine racemase, catabolic\tK01775 alr; alanine racemase [EC:5.1.1.1]" }, { "name":"BN406_01522 murI; glutamate racemase\tK01776 murI; glutamate racemase [EC:5.1.1.3]" }, { "name":"BN406_02002 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase\tK01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]" }, { "name":"BN406_01999 murG; UDPdiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase\tK02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]" }, { "name":"BN406_03459 uppP; UDP pyrophosphate phosphatase\tK06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]" }, { "name":"BN406_00030 mviN; virulence factor MviN-like protein\tK03980 murJ; putative peptidoglycan lipid II flippase" }, { "name":"BN406_00667 penicillin-binding protein 1A family\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"BN406_01060 mrcA; Penicillin-binding protein 1A\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"BN406_03311 penicillin-binding protein\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"BN406_03552 mrcA; Penicillin-binding protein 1A\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"BN406_04813 mrcB; MrcB penicillin binding protein B\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"BN406_05857 pbpC; bifunctional penicillin-binding protein\tK05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]" }, { "name":"BN406_02005 ftsI; penicillin-binding transmembrane protein\tK03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]" }, { "name":"BN406_03551 peptidoglycan glycosyltransferase\tK03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]" }, { "name":"BN406_00548 hypothetical protein\tK07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5\/6) [EC:3.4.16.4]" }, { "name":"BN406_01143 serine-type D-Ala-D-Ala carboxypeptidase\tK07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5\/6) [EC:3.4.16.4]" }, { "name":"BN406_01340 dac; penicillin-binding precursor (D-alanyl-D-alanine carboxypeptidase fraction A) transmembrane protein\tK07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5\/6) [EC:3.4.16.4]" }, { "name":"BN406_03067 mtgA; Monofunctional biosynthetic peptidoglycan transglycosylase\tK03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"BN406_02000 ftsW; cell division protein FtsW\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"BN406_00437 ErfK\/YbiS\/YcfS\/YnhG family protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"BN406_00438 hypothetical protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"BN406_00617 hypothetical protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"BN406_00822 ErfK\/YbiS\/YcfS\/YnhG family protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"BN406_01327 ErfK\/YbiS\/YcfS\/YnhG family protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"BN406_01884 hypothetical protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"BN406_03197 ErfK\/YbiS\/YcfS\/YnhG family protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"BN406_00942 hypothetical protein\tK21470 ldtD; L,D-transpeptidase" }, { "name":"BN406_01592 hypothetical protein\tK21470 ldtD; L,D-transpeptidase" }, { "name":"BN406_02541 lipoprotein\tK28919 dpaA; peptidoglycan meso-diaminopimelic acid protein amidase A [EC:3.4.-.-]" }, { "name":"BN406_03290 mepA; penicillin-insensitive murein endopeptidase\tK07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]" }, { "name":"BN406_00793 lytic transglycosylase\tK08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]" }, { "name":"BN406_03145 lytic murein transglycosylase A protein\tK08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]" }, { "name":"BN406_02666 membrane-bound lytic murein transglycosylase\tK08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]" }, { "name":"BN406_00881 hypothetical protein\tK07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]" }, { "name":"BN406_01341 rare lipoprotein A\tK03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]" }, { "name":"BN406_03455 hypothetical protein\tK03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]" }, { "name":"BN406_01059 amiC; N-acetylmuramoyl-L-alanine amidase AMIC precursor transmembrane protein\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"BN406_02012 amidase (AMPD protein)\tK11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" } ] }, { "name":"01004 Lipid biosynthesis proteins [BR:smi01004]", "children":[ { "name":"BN406_00877 fabD; Malonyl CoA-acyl carrier protein transacylase\tK00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]" }, { "name":"BN406_00958 fabH; 3-oxoacyl-ACP synthase\tK00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]" }, { "name":"BN406_03378 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase 1\tK00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]" }, { "name":"BN406_00880 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"BN406_01668 3-oxoacyl-ACP synthase\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"BN406_01669 3-oxoacyl-ACP synthase\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"BN406_00878 nodG; Nodulation protein G\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_01391 putative short-chain dehydrogenase\/reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_02869 oxidoreductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03494 3-oxoacyl-ACP reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03670 Short-chain type dehydrogenase\/reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03731 short chain dehydrogenase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03760 short-chain dehydrogenase\/reductase SDR\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03856 short-chain dehydrogenase\/reductase SDR\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03879 3-ketoacyl-ACP reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_04264 nodG; Nodulation protein G\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_04355 Short-chain type dehydrogenase\/reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_06191 Short-chain type dehydrogenase\/reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_06222 3-oxoacyl-(acyl-carrier-protein) reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_06762 hypothetical protein\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"BN406_03379 fabA; 3-hydroxydecanoyl-ACP dehydratase\tK01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase \/ trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]" }, { "name":"BN406_01236 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein]dehydratase\tK02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]" }, { "name":"BN406_01670 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA\/FabZ\tK02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]" }, { "name":"BN406_00553 fabI1; Enoyl-[acyl-carrier-protein] reductase [NADH] 1\tK00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]" }, { "name":"BN406_03377 fabI2; Enoyl-[acyl-carrier-protein] reductase [NADH] 2\tK00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]" }, { "name":"BN406_04095 fabI1; Enoyl-[acyl-carrier-protein] reductase [NADH] 1\tK00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]" }, { "name":"BN406_03020 tesA; acyl-CoA thioesterase i protein\tK10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]" }, { "name":"BN406_02988 tesB; acyl-CoA thioesterase II\tK10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.20]" }, { "name":"BN406_01627 hypothetical protein\tK10806 yciA; acyl-CoA thioesterase [EC:3.1.2.-]" }, { "name":"BN406_05015 des; Fatty acid desaturase\tK10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]" }, { "name":"BN406_02489 acsA3; probabable acetyl-CoA synthetase\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]" }, { "name":"BN406_03122 acsA2; Acetyl-coenzyme A synthetase 2\tK01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]" }, { "name":"BN406_03124 putative protein PA3568\tK01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]" }, { "name":"BN406_00344 acsA1; Acetoacetyl-coenzyme A synthetase\tK01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]" }, { "name":"BN406_00132 fadD; Long-chain-fatty-acid--CoA ligase\tK01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]" }, { "name":"BN406_00957 plsX; glycerol-3-phosphate acyltransferase PlsX\tK03621 plsX; phosphate acyltransferase [EC:2.3.1.274]" }, { "name":"BN406_01036 glycerol-3-phosphate acyltransferase PlsY\tK08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]" }, { "name":"BN406_02516 1-acyl-SN-glycerol-3-phosphate acyltransferase (PLSC) protein\tK00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]" } ] }, { "name":"01008 Polyketide biosynthesis proteins [BR:smi01008]", "children":[ { "name":"BN406_01902 aspartate racemase\tK01779 racD; aspartate racemase [EC:5.1.1.13]" } ] }, { "name":"01006 Prenyltransferases [BR:smi01006]", "children":[ { "name":"BN406_03068 ispA; geranyltranstransferase\tK00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]" }, { "name":"BN406_00500 ispB; Octaprenyl-diphosphate synthase\tK02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]" }, { "name":"BN406_01231 uppS; UDP pyrophosphate synthase\tK00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]" }, { "name":"BN406_01272 crtB; phytoene synthase\tK02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]" }, { "name":"BN406_01940 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase\tK00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]" }, { "name":"BN406_00518 coq2; 4-hydroxybenzoate polyprenyltransferase, mitochondrial\tK03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]" }, { "name":"BN406_00561 ctaB; Protoheme IX farnesyltransferase\tK02257 COX10; heme o synthase [EC:2.5.1.141]" } ] }, { "name":"01007 Amino acid related enzymes [BR:smi01007]", "children":[ { "name":"BN406_02759 gltX; Glutamate--tRNA ligase\tK01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]" }, { "name":"BN406_02495 gluQ; Glutamyl-Q tRNA(Asp) synthetase\tK01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]" }, { "name":"BN406_01481 tyrS; tyrosyl-tRNA synthetase\tK01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]" }, { "name":"BN406_00032 trpS; tryptophanyl-tRNA synthetase\tK01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]" }, { "name":"BN406_00847 cysS; cysteinyl-tRNA synthetase\tK01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]" }, { "name":"BN406_01254 argS; arginyl-tRNA synthetase\tK01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]" }, { "name":"BN406_01337 metG; Methionine--tRNA ligase\tK01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]" }, { "name":"BN406_00453 ileS; Isoleucine--tRNA ligase\tK01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]" }, { "name":"BN406_01247 valS; Valine--tRNA ligase\tK01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]" }, { "name":"BN406_03126 leuS; Leucine--tRNA ligase\tK01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]" }, { "name":"BN406_02760 lysS; Lysine--tRNA ligase\tK04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]" }, { "name":"BN406_00929 aspS; Aspartate--tRNA ligase\tK01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]" }, { "name":"BN406_00443 hisS; Histidine--tRNA ligase\tK01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]" }, { "name":"BN406_00505 glyQ; glycyl-tRNA synthetase subunit alpha\tK01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]" }, { "name":"BN406_00509 glyS; glycyl-tRNA synthetase subunit beta\tK01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]" }, { "name":"BN406_01263 serS; seryl-tRNA synthetase\tK01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]" }, { "name":"BN406_01020 proS; Proline--tRNA ligase\tK01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]" }, { "name":"BN406_01157 thrS; Threonine--tRNA ligase\tK01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]" }, { "name":"BN406_01531 alaS; Alanine--tRNA ligase\tK01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]" }, { "name":"BN406_03417 pheS; phenylalanyl-tRNA synthetase subunit alpha\tK01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]" }, { "name":"BN406_03418 pheT; phenylalanyl-tRNA synthetase subunit beta\tK01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]" }, { "name":"BN406_02175 aatA; Aspartate aminotransferase A\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_03087 aatB; Aspartate aminotransferase B\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_03964 aatB; Aspartate aminotransferase B\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"BN406_01465 aatC; Putative aminotransferase AatC\tK14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]" }, { "name":"BN406_03438 tatA3; Tyrosine aminotransferase\tK00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]" }, { "name":"BN406_00201 aminotransferase\tK12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84]" }, { "name":"BN406_00708 histidinol-phosphate aminotransferase\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_02520 hisC1; Histidinol-phosphate aminotransferase 1\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_03069 hisC2; Histidinol-phosphate aminotransferase 2\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_03628 hisC3; Histidinol-phosphate aminotransferase 3\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"BN406_02167 Putative 8-amino-7-oxononanoate synthase\/2-amino-3-ketobutyrate coenzyme A ligase\tK00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]" }, { "name":"BN406_02845 hemA; 5-aminolevulinate synthase\tK00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]" }, { "name":"BN406_04785 hemA; 5-aminolevulinate synthase\tK00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]" }, { "name":"BN406_02253 Omega-amino acid--pyruvate aminotransferase\tK00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]" }, { "name":"BN406_03089 Omega-amino acid--pyruvate aminotransferase\tK00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]" }, { "name":"BN406_00150 argD; Acetylornithine aminotransferase\tK00821 argD; acetylornithine\/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]" }, { "name":"BN406_05806 puuE; 4-aminobutyrate aminotransferase PuuE\tK00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]" }, { "name":"BN406_04763 Adenosylmethionine--8-amino-7-oxononanoatetransaminase\tK12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]" }, { "name":"BN406_04023 glutamate-1-semialdehyde 2,1-aminomutase\tK01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]" }, { "name":"BN406_06745 threonine dehydratase\tK01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]" }, { "name":"BN406_01195 D-amino-acid transaminase\tK00824 dat; D-alanine transaminase [EC:2.6.1.21]" }, { "name":"BN406_05037 D-amino-acid transaminase\tK00824 dat; D-alanine transaminase [EC:2.6.1.21]" }, { "name":"BN406_00628 ilvE2; aminotransferase\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"BN406_03352 ilvE; putative branched-chain-amino-acid aminotransferase\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"BN406_05687 phnW; 2-aminoethylphosphonate--pyruvate transaminase\tK03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]" }, { "name":"BN406_03708 aminotransferase, class V superfamily\tK00830 AGXT; alanine-glyoxylate transaminase \/ serine-glyoxylate transaminase \/ serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]" }, { "name":"BN406_04551 Agxt; Serine--pyruvate aminotransferase, mitochondrial\tK00830 AGXT; alanine-glyoxylate transaminase \/ serine-glyoxylate transaminase \/ serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]" }, { "name":"BN406_02588 serC; phosphoserine aminotransferase\tK00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]" } ] }, { "name":"00199 Cytochrome P450" }, { "name":"00194 Photosynthesis proteins [BR:smi00194]", "children":[ { "name":"BN406_02889 atpC; F0F1 ATP synthase subunit epsilon\tK02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon" }, { "name":"BN406_02890 atpD; ATP synthase subunit beta\tK02112 ATPF1B; F-type H+\/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]" }, { "name":"BN406_02891 atpG; F0F1 ATP synthase subunit gamma\tK02115 ATPF1G; F-type H+-transporting ATPase subunit gamma" }, { "name":"BN406_02892 atpA; ATP synthase subunit alpha\tK02111 ATPF1A; F-type H+\/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]" }, { "name":"BN406_02893 atpH; F0F1 ATP synthase subunit delta\tK02113 ATPF1D; F-type H+-transporting ATPase subunit delta" }, { "name":"BN406_00491 atpF2; ATP synthase subunit b 2\tK02109 ATPF0B; F-type H+-transporting ATPase subunit b" }, { "name":"BN406_00492 atpF1; ATP synthase subunit b 1\tK02109 ATPF0B; F-type H+-transporting ATPase subunit b" }, { "name":"BN406_00490 atpE; F0F1 ATP synthase subunit C\tK02110 ATPF0C; F-type H+-transporting ATPase subunit c" }, { "name":"BN406_00489 atpB; F0F1 ATP synthase subunit A\tK02108 ATPF0A; F-type H+-transporting ATPase subunit a" }, { "name":"BN406_00488 atpI; FOF1 ATP synthase, subunit I transmembrane protein\tK02116 atpI; ATP synthase protein I" } ] } ] }, { "name":"09182 Protein families: genetic information processing", "children":[ { "name":"03000 Transcription factors [BR:smi03000]", "children":[ { "name":"BN406_02757 AraC family transcriptional regulator\tK13653 K13653; AraC family transcriptional regulator" }, { "name":"BN406_02046 transcription regulator protein\tK07506 K07506; AraC family transcriptional regulator" }, { "name":"BN406_03589 AraC family transcriptional regulator\tK07506 K07506; AraC family transcriptional regulator" }, { "name":"BN406_04746 Transcriptional regulator\tK07506 K07506; AraC family transcriptional regulator" }, { "name":"BN406_04747 AraC family transcriptional regulator\tK07506 K07506; AraC family transcriptional regulator" }, { "name":"BN406_05520 AraC family transcriptional regulator\tK07506 K07506; AraC family transcriptional regulator" }, { "name":"BN406_05748 putative transcriptional regulator, AraC family protein\tK07506 K07506; AraC family transcriptional regulator" }, { "name":"BN406_00068 methylated-DNA--protein-cysteinemethyltransferase\tK10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response \/ methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]" }, { "name":"BN406_03296 methylated-DNA--protein-cysteine methyltransferase transcription regulator\tK10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response \/ methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]" }, { "name":"BN406_02349 transcription regulator protein\tK03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator" }, { "name":"BN406_03083 transcription regulator protein\tK03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator" }, { "name":"BN406_03556 LysR family transcriptional regulator\tK03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator" }, { "name":"BN406_04835 LysR family transcriptional regulator\tK03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator" }, { "name":"BN406_04985 LysR family transcriptional regulator\tK03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator" }, { "name":"BN406_05532 probabable transcriptional regulator\tK03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator" }, { "name":"BN406_05214 pcaQ; HTH-type transcriptional regulator PcaQ\tK02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator" }, { "name":"BN406_00420 LysR family transcriptional regulator\tK04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator" }, { "name":"BN406_04199 nodD2; Nodulation protein D 2\tK14657 nodD; LysR family transcriptional regulator, nod-box dependent transcriptional activator" }, { "name":"BN406_04249 nodD3; Nodulation protein D 3\tK14657 nodD; LysR family transcriptional regulator, nod-box dependent transcriptional activator" }, { "name":"BN406_04274 nodD1; Nodulation protein D 1\tK14657 nodD; LysR family transcriptional regulator, nod-box dependent transcriptional activator" }, { "name":"BN406_04253 syrM; HTH-type transcriptional regulator SyrM\tK25882 syrM; LysR family transcriptional regulator, transcriptional activator of nodD3 and syrA" }, { "name":"BN406_03553 ampR; HTH-type transcriptional activator AmpR\tK17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase" }, { "name":"BN406_00060 LysR family transcriptional regulator\tK18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC" }, { "name":"BN406_04356 LysR family transcriptional regulator\tK18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC" }, { "name":"BN406_06190 transcriptional regulator protein\tK18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC" }, { "name":"BN406_05035 LysR family transcriptional regulator\tK21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT" }, { "name":"BN406_06460 cbbR; HTH-type transcriptional regulator CbbR\tK21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator" }, { "name":"BN406_03212 transcription regulator protein\tK23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator" }, { "name":"BN406_05855 DeoR family transcriptional regulator\tK11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor" }, { "name":"BN406_02870 glpR; Glycerol-3-phosphate regulon repressor\tK02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor" }, { "name":"BN406_05691 putative transcriptional regulator\tK02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor" }, { "name":"BN406_00310 aglR; HTH-type transcriptional regulator AglR\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor" }, { "name":"BN406_01577 LacI family transcriptional regulator\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor" }, { "name":"BN406_01658 transcription regulator protein\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor" }, { "name":"BN406_02382 transcription regulator protein\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor" }, { "name":"BN406_02752 transcription regulator protein\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor" }, { "name":"BN406_03673 alanine racemase\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor" }, { "name":"BN406_05047 LacI family transcriptional regulator\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor" }, { "name":"BN406_05138 LacI family transcriptional regulator\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor" }, { "name":"BN406_05159 LacI family transcriptional regulator\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor" }, { "name":"BN406_05318 LacI family transcriptional regulator\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor" }, { "name":"BN406_05739 LacI family transcriptional regulator\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor" }, { "name":"BN406_05880 putative lacI family transcriptional regulator protein\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor" }, { "name":"BN406_06061 LacI family transcriptional regulator\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor" }, { "name":"BN406_06348 aglR; HTH-type transcriptional regulator AglR\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor" }, { "name":"BN406_06733 unnamed protein product\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor" }, { "name":"BN406_06788 hypothetical protein\tK02529 galR; LacI family transcriptional regulator, galactose operon repressor" }, { "name":"BN406_05119 transcriptional regulator protein\tK05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG" }, { "name":"BN406_05274 LacI family transcriptional regulator\tK05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG" }, { "name":"BN406_06202 LacI family transcriptional regulator\tK03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor" }, { "name":"BN406_05325 LacI family transcriptional regulator\tK06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor" }, { "name":"BN406_05248 putative HTH-type transcriptional regulator RB1450\tK02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein" }, { "name":"BN406_02555 hutC; Histidine utilization repressor\tK05836 hutC; GntR family transcriptional regulator, histidine utilization repressor" }, { "name":"BN406_03636 hutC; Histidine utilization repressor\tK05836 hutC; GntR family transcriptional regulator, histidine utilization repressor" }, { "name":"BN406_03992 GntR family transcriptional regulator with UTRA sensor domain\tK05836 hutC; GntR family transcriptional regulator, histidine utilization repressor" }, { "name":"BN406_03999 GntR family transcriptional regulator with UTRA sensor domain\tK05836 hutC; GntR family transcriptional regulator, histidine utilization repressor" }, { "name":"BN406_06606 GntR family transcriptional regulator with UTRA sensor domain\tK05836 hutC; GntR family transcriptional regulator, histidine utilization repressor" }, { "name":"BN406_03678 GntR family transcriptional regulator\tK10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator" }, { "name":"BN406_03331 transcription regulator protein\tK24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator" }, { "name":"BN406_02417 transcription regulator protein\tK03710 K03710; GntR family transcriptional regulator" }, { "name":"BN406_02809 transcription regulator protein\tK03710 K03710; GntR family transcriptional regulator" }, { "name":"BN406_05401 GntR family transcriptional regulator\tK03710 K03710; GntR family transcriptional regulator" }, { "name":"BN406_00431 transcription regulator protein\tK05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex" }, { "name":"BN406_06371 nanR; Transcriptional regulator NanR\tK22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor" }, { "name":"BN406_04796 DeoR family transcriptional regulator\tK00375 K00375; GntR family transcriptional regulator \/ MocR family aminotransferase" }, { "name":"BN406_05700 GntR family transcriptional regulator\tK00375 K00375; GntR family transcriptional regulator \/ MocR family aminotransferase" }, { "name":"BN406_06686 mocR1; putative rhizopine catabolism regulatory protein mocR\tK00375 K00375; GntR family transcriptional regulator \/ MocR family aminotransferase" }, { "name":"BN406_06693 mocR3; putative rhizopine catabolism regulatory protein mocR\tK00375 K00375; GntR family transcriptional regulator \/ MocR family aminotransferase" }, { "name":"BN406_04029 GntR family transcriptional regulator\tK13654 mcbR; GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator" }, { "name":"BN406_04213 GntR family transcriptional regulator\tK23466 tgnR; GntR family transcriptional regulator, trigonelline degradation regulator" }, { "name":"BN406_00606 betI; HTH-type transcriptional regulator BetI\tK02167 betI; TetR\/AcrR family transcriptional regulator, transcriptional repressor of bet genes" }, { "name":"BN406_04684 TetR family\tK02167 betI; TetR\/AcrR family transcriptional regulator, transcriptional repressor of bet genes" }, { "name":"BN406_03321 transcription regulator protein\tK03577 acrR; TetR\/AcrR family transcriptional regulator, acrAB operon repressor" }, { "name":"BN406_02301 rutR; HTH-type transcriptional regulator RutR\tK09017 rutR; TetR\/AcrR family transcriptional regulator" }, { "name":"BN406_03640 tetracycline transcriptional regulator YcdC domain-containing protein\tK09017 rutR; TetR\/AcrR family transcriptional regulator" }, { "name":"BN406_05785 transcriptional regulator TetR\tK23777 cecR; TetR\/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity" }, { "name":"BN406_01363 lrp2; probabable transcriptional regulator\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein" }, { "name":"BN406_02548 lrp3; leucine-responsive regulatory protein\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein" }, { "name":"BN406_03475 transcription regulator protein\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein" }, { "name":"BN406_05112 transcriptional regulator protein\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein" }, { "name":"BN406_06249 AsnC family transcriptional regulator\tK15782 doeX; Lrp\/AsnC family transcriptional regulator, regulator of ectoine-degradation genes" }, { "name":"BN406_01449 transcription regulator protein\tK05800 decR; Lrp\/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator" }, { "name":"BN406_01612 transcription regulator protein\tK05800 decR; Lrp\/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator" }, { "name":"BN406_01901 transcription regulator protein\tK05800 decR; Lrp\/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator" }, { "name":"BN406_03078 LuxR family transcriptional regulator\tK07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA" }, { "name":"BN406_04338 luxR; regulatory protein LuxR\tK19732 traR; LuxR family transcriptional regulator, activator of conjugal transfer of Ti plasmids" }, { "name":"BN406_06832 traR; putative transcriptional activator protein traR\tK19732 traR; LuxR family transcriptional regulator, activator of conjugal transfer of Ti plasmids" }, { "name":"BN406_01571 transcription regulator HSL-dependent protein\tK19733 sinR; LuxR family transcriptional regulator, quorum-sensing system regulator SinR" }, { "name":"BN406_00263 visN; VisN\tK21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism" }, { "name":"BN406_00868 transcription regulator protein\tK06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin" }, { "name":"BN406_00618 transcription regulator protein\tK23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator" }, { "name":"BN406_02328 MarR family transcriptional regulator\tK23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator" }, { "name":"BN406_04884 MarR family transcriptional regulator\tK23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator" }, { "name":"BN406_05767 expG; Exopolysaccharide II synthesis transcriptional activator expG\tK25883 expG; MarR family transcriptional regulator, exopolysaccharide II synthesis transcriptional activator" }, { "name":"BN406_04926 Transcriptional regulator, MerR\/CueR family\tK08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein" }, { "name":"BN406_05646 hmrR2; Heavy metal-dependent transcription regulator 2\tK19591 cueR; MerR family transcriptional regulator, copper efflux regulator" }, { "name":"BN406_01557 transcription regulator protein\tK13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR" }, { "name":"BN406_02881 fur; ferric uptake regulation protein\tK03711 fur; Fur family transcriptional regulator, ferric uptake regulator" }, { "name":"BN406_01641 zur; zinc uptake regulation protein\tK09823 zur; Fur family transcriptional regulator, zinc uptake regulator" }, { "name":"BN406_03380 irr; IRON response regulator protein\tK09826 irr; Fur family transcriptional regulator, iron response regulator" }, { "name":"BN406_05310 iclR; Acetate operon repressor\tK13641 iclR; IclR family transcriptional regulator, acetate operon repressor" }, { "name":"BN406_06285 IclR family transcriptional regulator\tK13641 iclR; IclR family transcriptional regulator, acetate operon repressor" }, { "name":"BN406_06797 hypothetical protein\tK13641 iclR; IclR family transcriptional regulator, acetate operon repressor" }, { "name":"BN406_05208 pcaR; Pca regulon regulatory protein\tK02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein" }, { "name":"BN406_06723 beta-ketoadipate pathway transcription regulator\tK02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein" }, { "name":"BN406_00120 transcription regulator protein\tK10914 crp; CRP\/FNR family transcriptional regulator, cyclic AMP receptor protein" }, { "name":"BN406_04142 fixK1; transcriptional regulator FixK\tK15861 fixK; CRP\/FNR family transcriptional regulator, nitrogen fixation regulation protein" }, { "name":"BN406_04203 fixK3; Nitrogen fixation regulation protein fixK\tK15861 fixK; CRP\/FNR family transcriptional regulator, nitrogen fixation regulation protein" }, { "name":"BN406_04387 fixK5; Nitrogen fixation regulation protein fixK\tK15861 fixK; CRP\/FNR family transcriptional regulator, nitrogen fixation regulation protein" }, { "name":"BN406_04398 CarD family transcriptional regulator\tK21564 nnrR; CRP\/FNR family transcriptional regulator, nitrogen oxide reductase regulator" }, { "name":"BN406_00355 aau3; Protein aau3\tK13772 rirA; Rrf2 family transcriptional regulator, iron-responsive regulator" }, { "name":"BN406_00812 transcription regulator protein\tK03892 arsR; ArsR family transcriptional regulator, arsenate\/arsenite\/antimonite-responsive transcriptional repressor" }, { "name":"BN406_05650 ArsR family transcriptional regulator\tK03892 arsR; ArsR family transcriptional regulator, arsenate\/arsenite\/antimonite-responsive transcriptional repressor" }, { "name":"BN406_01623 transcription regulator protein\tK22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator" }, { "name":"BN406_02251 nolR; Nodulation protein nolR\tK22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator" }, { "name":"BN406_05252 hypothetical protein\tK21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator" }, { "name":"BN406_00338 XRE family transcriptional regulator\tK07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator" }, { "name":"BN406_01015 birA; biotin--[acetyl-CoA-carboxylase] synthetase\tK03524 birA; BirA family transcriptional regulator, biotin operon repressor \/ biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]" }, { "name":"BN406_00425 hypothetical protein\tK18831 higA; HTH-type transcriptional regulator \/ antitoxin HigA" }, { "name":"BN406_04344 putative transcription regulator protein\tK18831 higA; HTH-type transcriptional regulator \/ antitoxin HigA" }, { "name":"BN406_06554 acoR; Acetoin catabolism regulatory protein\tK21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR" }, { "name":"BN406_04230 nifA; Nif-specific regulatory protein\tK02584 nifA; Nif-specific regulatory protein" }, { "name":"BN406_02786 molybdenum transporter\tK02019 modE; molybdate transport system regulatory protein" }, { "name":"BN406_01704 hypothetical protein\tK21829 dauR; D-arginine utilization repressor" }, { "name":"BN406_03894 hypothetical protein\tK21829 dauR; D-arginine utilization repressor" }, { "name":"BN406_02318 hypothetical protein\tK07726 K07726; putative transcriptional regulator" }, { "name":"BN406_03812 DNA-binding protein\tK07726 K07726; putative transcriptional regulator" }, { "name":"BN406_00114 putA; Bifunctional protein putA\tK13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor \/ proline dehydrogenase \/ delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]" }, { "name":"BN406_04363 nosR; NosR regulatory protein for N2O reductase\tK19339 nosR; NosR\/NirI family transcriptional regulator, nitrous oxide reductase regulator" }, { "name":"BN406_01727 hypothetical protein\tK23239 frmR; FrmR\/RcnR family transcriptional regulator, repressor of frmRAB operon" }, { "name":"BN406_02532 hypothetical protein\tK05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator" }, { "name":"BN406_03129 parB; Chromosome-partitioning protein parB\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"BN406_03501 plasmid partitioning protein RepB\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"BN406_05090 plasmid partitioning protein RepB\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"BN406_05197 plasmid partitioning protein RepB\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"BN406_06609 repB; replication protein B\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"BN406_06810 plasmid partitioning protein\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"BN406_03058 hypothetical protein\tK07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription" }, { "name":"BN406_00655 mucR; Transcriptional regulatory protein mucR\tK25884 mucR; MucR family transcriptional regulator, transcriptional regulator of exopolysaccharide biosynthesis" }, { "name":"BN406_00010 hrcA; heat-inducible transcription repressor\tK03705 hrcA; heat-inducible transcriptional repressor" }, { "name":"BN406_05147 paaX; ArsR family transcriptional regulator\tK02616 paaX; phenylacetic acid degradation operon negative regulatory protein" }, { "name":"BN406_05528 SorC family transcriptional regulator\tK05346 deoR; deoxyribonucleoside regulator" }, { "name":"BN406_06648 putative membrane protein\tK05346 deoR; deoxyribonucleoside regulator" }, { "name":"BN406_06010 lsrR; Transcriptional regulator LsrR\tK11531 lsrR; lsr operon transcriptional repressor" }, { "name":"BN406_03399 rnk; nucleoside diphosphate kinase regulator\tK06140 rnk; regulator of nucleoside diphosphate kinase" }, { "name":"BN406_04953 GreA\/GreB family elongation factor\tK06140 rnk; regulator of nucleoside diphosphate kinase" }, { "name":"BN406_00082 hypothetical protein\tK07733 alpA; prophage regulatory protein" }, { "name":"BN406_00572 hypothetical protein\tK07735 algH; putative transcriptional regulator" }, { "name":"BN406_00644 hypothetical protein\tK06204 dksA; RNA polymerase-binding transcription factor" }, { "name":"BN406_01538 TraR\/DksA family transcriptional regulator\tK06204 dksA; RNA polymerase-binding transcription factor" }, { "name":"BN406_00944 nrdR; transcriptional regulator NrdR\tK07738 nrdR; transcriptional repressor NrdR" }, { "name":"BN406_02008 cell division protein MraZ\tK03925 mraZ; transcriptional regulator MraZ" }, { "name":"BN406_01249 exoR; Exopolysaccharide production negative regulator\tK25885 exoR; exopolysaccharide production negative regulator" } ] }, { "name":"03021 Transcription machinery [BR:smi03021]", "children":[ { "name":"BN406_01111 rpoA; DNA-directed RNA polymerase subunit alpha\tK03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]" }, { "name":"BN406_01078 rpoB; DNA-directed RNA polymerase subunit beta\tK03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]" }, { "name":"BN406_01079 rpoC; DNA-directed RNA polymerase subunit beta'\tK03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]" }, { "name":"BN406_00799 rpoZ; DNA-directed RNA polymerase subunit omega\tK03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]" }, { "name":"BN406_02165 rpoD; RNA polymerase sigma factor rpoD\tK03086 rpoD; RNA polymerase primary sigma factor" }, { "name":"BN406_00003 putative protein R00370\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"BN406_01924 rpoE1; RNA polymerase sigma factor protein\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"BN406_02226 rpoE3; RNA polymerase sigma-E factor (sigma-24) protein\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"BN406_02283 rpoE2; RNA polymerase sigma factor\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"BN406_02690 rpoE4; RNA polymerase sigma-E factor (sigma-24) protein\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"BN406_03663 ECF subfamily RNA polymerase sigma-24 subunit\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"BN406_05006 rpoE6; RNA polymerase ECF sigma factor\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"BN406_05103 ECF subfamily RNA polymerase sigma-24 subunit\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"BN406_05203 ECF subfamily RNA polymerase sigma-24 subunit\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"BN406_05384 ECF subfamily RNA polymerase sigma-24 subunit\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"BN406_02583 rpoH1; RNA polymerase sigma-32 factor\tK03089 rpoH; RNA polymerase sigma-32 factor" }, { "name":"BN406_03057 rpoH3; RNA polymerase sigma-32 factor\tK03089 rpoH; RNA polymerase sigma-32 factor" }, { "name":"BN406_00014 rpoN; RNA polymerase sigma-54 factor\tK03092 rpoN; RNA polymerase sigma-54 factor" }, { "name":"BN406_03368 nusA; transcription elongation factor NusA\tK02600 nusA; transcription termination\/antitermination protein NusA" }, { "name":"BN406_00951 nusB; transcription antitermination protein NusB\tK03625 nusB; transcription antitermination protein NusB" }, { "name":"BN406_01073 nusG; transcription antitermination protein NusG\tK02601 nusG; transcription termination\/antitermination protein NusG" }, { "name":"BN406_00644 hypothetical protein\tK06204 dksA; RNA polymerase-binding transcription factor" }, { "name":"BN406_01538 TraR\/DksA family transcriptional regulator\tK06204 dksA; RNA polymerase-binding transcription factor" }, { "name":"BN406_01306 greA; Transcription elongation factor GreA\tK03624 greA; transcription elongation factor GreA" }, { "name":"BN406_03134 rho; Transcription termination factor Rho\tK03628 rho; transcription termination factor Rho" } ] }, { "name":"03019 Messenger RNA biogenesis [BR:smi03019]", "children":[ { "name":"BN406_01058 rne; ribonuclease E protein\tK08300 rne; ribonuclease E [EC:3.1.26.12]" }, { "name":"BN406_00807 rncS; ribonuclease III\tK03685 rnc; ribonuclease III [EC:3.1.26.3]" }, { "name":"BN406_01016 hypothetical protein\tK12574 rnj; ribonuclease J [EC:3.1.-.-]" }, { "name":"BN406_01033 rnr; exoribonuclease II protein\tK12573 rnr; ribonuclease R [EC:3.1.13.1]" }, { "name":"BN406_05499 DEAD\/DEAH box helicase\tK11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]" }, { "name":"BN406_00061 DEAD\/DEAH box helicase\tK05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]" }, { "name":"BN406_02168 recQ; ATP-dependent DNA helicase recQ\tK03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]" }, { "name":"BN406_01175 eno; phosphopyruvate hydratase\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]" }, { "name":"BN406_03375 pnp; Polyribonucleotide nucleotidyltransferase\tK00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]" }, { "name":"BN406_03134 rho; Transcription termination factor Rho\tK03628 rho; transcription termination factor Rho" }, { "name":"BN406_03312 dnaK; Chaperone protein DnaK\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"BN406_00448 groL1; 60 kDa chaperonin 1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_00931 groL2; 60 kDa chaperonin 2\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_04188 groL1; 60 kDa chaperonin 1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_04784 groL6; 60 kDa chaperonin 6\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_05019 groL3; 60 kDa chaperonin 3\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_05660 groL5; 60 kDa chaperonin 5\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_01196 hfq; RNA-binding protein Hfq\tK03666 hfq; host factor-I protein" }, { "name":"BN406_00921 ppk; polyphosphate kinase\tK00937 ppk1; polyphosphate kinase [EC:2.7.4.1]" }, { "name":"BN406_00141 hypothetical protein\tK22468 ppk2; polyphosphate kinase [EC:2.7.4.34]" }, { "name":"BN406_04148 polyphosphate kinase 2\tK22468 ppk2; polyphosphate kinase [EC:2.7.4.34]" }, { "name":"BN406_04989 hypothetical protein\tK22468 ppk2; polyphosphate kinase [EC:2.7.4.34]" }, { "name":"BN406_02213 hypothetical protein\tK00970 pcnB; poly(A) polymerase [EC:2.7.7.19]" }, { "name":"BN406_02966 rppH; RNA pyrophosphohydrolase\tK08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]" }, { "name":"BN406_03201 hrpB; ATP-dependent RNA helicase hrpB\tK03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]" } ] }, { "name":"03041 Spliceosome" }, { "name":"03011 Ribosome [BR:smi03011]", "children":[ { "name":"BN406_03386 rpsA; 30S ribosomal protein S1\tK02945 RP-S1; small subunit ribosomal protein S1" }, { "name":"BN406_01227 rpsB; 30S ribosomal protein S2\tK02967 RP-S2; small subunit ribosomal protein S2" }, { "name":"BN406_01093 rpsC; 30S ribosomal protein S3\tK02982 RP-S3; small subunit ribosomal protein S3" }, { "name":"BN406_01520 rpsD; 30S ribosomal protein S4\tK02986 RP-S4; small subunit ribosomal protein S4" }, { "name":"BN406_01104 rpsE; 30S ribosomal protein S5\tK02988 RP-S5; small subunit ribosomal protein S5" }, { "name":"BN406_00874 rpsF; 30S ribosomal protein S6\tK02990 RP-S6; small subunit ribosomal protein S6" }, { "name":"BN406_01083 rpsG; 30S ribosomal protein S7\tK02992 RP-S7; small subunit ribosomal protein S7" }, { "name":"BN406_01101 rpsH; 30S ribosomal protein S8\tK02994 RP-S8; small subunit ribosomal protein S8" }, { "name":"BN406_00978 rpsI; 30S ribosomal protein S9\tK02996 RP-S9; small subunit ribosomal protein S9" }, { "name":"BN406_01086 rpsJ; 30S ribosomal protein S10\tK02946 RP-S10; small subunit ribosomal protein S10" }, { "name":"BN406_01110 rpsK; 30S ribosomal protein S11\tK02948 RP-S11; small subunit ribosomal protein S11" }, { "name":"BN406_01082 rpsL; 30S ribosomal protein S12\tK02950 RP-S12; small subunit ribosomal protein S12" }, { "name":"BN406_01109 rpsM; 30S ribosomal protein S13\tK02952 RP-S13; small subunit ribosomal protein S13" }, { "name":"BN406_01100 rpsN; 30S ribosomal protein S14\tK02954 RP-S14; small subunit ribosomal protein S14" }, { "name":"BN406_03374 rpsO; 30S ribosomal protein S15\tK02956 RP-S15; small subunit ribosomal protein S15" }, { "name":"BN406_03043 rpsP; 30S ribosomal protein S16\tK02959 RP-S16; small subunit ribosomal protein S16" }, { "name":"BN406_01096 rpsQ; 30S ribosomal protein S17\tK02961 RP-S17; small subunit ribosomal protein S17" }, { "name":"BN406_00873 rpsR; 30S ribosomal protein S18\tK02963 RP-S18; small subunit ribosomal protein S18" }, { "name":"BN406_01091 rpsS; 30S ribosomal protein S19\tK02965 RP-S19; small subunit ribosomal protein S19" }, { "name":"BN406_03499 rpsT; 30S ribosomal protein S20\tK02968 RP-S20; small subunit ribosomal protein S20" }, { "name":"BN406_01878 unnamed protein product\tK02970 RP-S21; small subunit ribosomal protein S21" }, { "name":"BN406_02712 unnamed protein product\tK02970 RP-S21; small subunit ribosomal protein S21" }, { "name":"BN406_01075 rplA; 50S ribosomal protein L1\tK02863 RP-L1; large subunit ribosomal protein L1" }, { "name":"BN406_01090 rplB; 50S ribosomal protein L2\tK02886 RP-L2; large subunit ribosomal protein L2" }, { "name":"BN406_01087 rplC; 50S ribosomal protein L3\tK02906 RP-L3; large subunit ribosomal protein L3" }, { "name":"BN406_01088 rplD; 50S ribosomal protein L4\tK02926 RP-L4; large subunit ribosomal protein L4" }, { "name":"BN406_01099 rplE; 50S ribosomal protein L5\tK02931 RP-L5; large subunit ribosomal protein L5" }, { "name":"BN406_01102 rplF; 50S ribosomal protein L6\tK02933 RP-L6; large subunit ribosomal protein L6" }, { "name":"BN406_00871 rplI; 50S ribosomal protein L9\tK02939 RP-L9; large subunit ribosomal protein L9" }, { "name":"BN406_01076 rplJ; 50S ribosomal protein L10\tK02864 RP-L10; large subunit ribosomal protein L10" }, { "name":"BN406_01074 rplK; 50S ribosomal protein L11\tK02867 RP-L11; large subunit ribosomal protein L11" }, { "name":"BN406_01077 rplL; 50S ribosomal protein L7\/L12\tK02935 RP-L7; large subunit ribosomal protein L7\/L12" }, { "name":"BN406_00979 rplM; 50S ribosomal protein L13\tK02871 RP-L13; large subunit ribosomal protein L13" }, { "name":"BN406_01097 rplN; 50S ribosomal protein L14\tK02874 RP-L14; large subunit ribosomal protein L14" }, { "name":"BN406_01106 rplO; 50S ribosomal protein L15\tK02876 RP-L15; large subunit ribosomal protein L15" }, { "name":"BN406_01094 rplP; 50S ribosomal protein L16\tK02878 RP-L16; large subunit ribosomal protein L16" }, { "name":"BN406_01112 rplQ; 50S ribosomal protein L17\tK02879 RP-L17; large subunit ribosomal protein L17" }, { "name":"BN406_01103 rplR; 50S ribosomal protein L18\tK02881 RP-L18; large subunit ribosomal protein L18" }, { "name":"BN406_03047 rplS; 50S ribosomal protein L19\tK02884 RP-L19; large subunit ribosomal protein L19" }, { "name":"BN406_03416 rplT; 50S ribosomal protein L20\tK02887 RP-L20; large subunit ribosomal protein L20" }, { "name":"BN406_02953 rplU; 50S ribosomal protein L21\tK02888 RP-L21; large subunit ribosomal protein L21" }, { "name":"BN406_01092 rplV; 50S ribosomal protein L22\tK02890 RP-L22; large subunit ribosomal protein L22" }, { "name":"BN406_01089 rplW; 50S ribosomal protein L23\tK02892 RP-L23; large subunit ribosomal protein L23" }, { "name":"BN406_01098 rplX; 50S ribosomal protein L24\tK02895 RP-L24; large subunit ribosomal protein L24" }, { "name":"BN406_02954 rpmA; 50S ribosomal protein L27\tK02899 RP-L27; large subunit ribosomal protein L27" }, { "name":"BN406_02526 rpmB; 50S ribosomal protein L28\tK02902 RP-L28; large subunit ribosomal protein L28" }, { "name":"BN406_01095 rpmC; 50S ribosomal protein L29\tK02904 RP-L29; large subunit ribosomal protein L29" }, { "name":"BN406_01105 rpmD; 50S ribosomal protein L30\tK02907 RP-L30; large subunit ribosomal protein L30" }, { "name":"BN406_02632 rpmE; 50S ribosomal protein L31\tK02909 RP-L31; large subunit ribosomal protein L31" }, { "name":"BN406_03065 rpmF; 50S ribosomal protein L32\tK02911 RP-L32; large subunit ribosomal protein L32" }, { "name":"BN406_01029 rpmG; 50S ribosomal protein L33\tK02913 RP-L33; large subunit ribosomal protein L33" }, { "name":"BN406_03415 rpmI; 50S ribosomal protein L35\tK02916 RP-L35; large subunit ribosomal protein L35" }, { "name":"BN406_02645 rpmJ; 50S ribosomal protein L36\tK02919 RP-L36; large subunit ribosomal protein L36" }, { "name":"BN406_02204 rplY; 50S ribosomal protein L25\tK02897 RP-L25; large subunit ribosomal protein L25" }, { "name":"BN406_RNA00042 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"BN406_RNA00051 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"BN406_RNA00055 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"BN406_RNA00039 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"BN406_RNA00048 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"BN406_RNA00058 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"BN406_RNA00038 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"BN406_RNA00047 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"BN406_RNA00059 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" } ] }, { "name":"03009 Ribosome biogenesis [BR:smi03009]", "children":[ { "name":"BN406_00807 rncS; ribonuclease III\tK03685 rnc; ribonuclease III [EC:3.1.26.3]" }, { "name":"BN406_00808 era; GTPase Era\tK03595 era; GTPase" }, { "name":"BN406_02957 obg; GTPase obg\tK03979 obgE; GTPase [EC:3.6.5.-]" }, { "name":"BN406_00644 hypothetical protein\tK06204 dksA; RNA polymerase-binding transcription factor" }, { "name":"BN406_01538 TraR\/DksA family transcriptional regulator\tK06204 dksA; RNA polymerase-binding transcription factor" }, { "name":"BN406_03368 nusA; transcription elongation factor NusA\tK02600 nusA; transcription termination\/antitermination protein NusA" }, { "name":"BN406_00951 nusB; transcription antitermination protein NusB\tK03625 nusB; transcription antitermination protein NusB" }, { "name":"BN406_01073 nusG; transcription antitermination protein NusG\tK02601 nusG; transcription termination\/antitermination protein NusG" }, { "name":"BN406_00884 rsmA; Ribosomal RNA small subunit methyltransferase A\tK02528 ksgA; 16S rRNA (adenine1518-N6\/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]" }, { "name":"BN406_03119 sun; sun protein\tK03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]" }, { "name":"BN406_03454 NOL1\/NOP2\/SUN family signature protein\tK03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]" }, { "name":"BN406_03376 hypothetical protein\tK00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]" }, { "name":"BN406_00458 hypothetical protein\tK08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]" }, { "name":"BN406_00428 16S ribosomal RNA methyltransferase RsmE\tK09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]" }, { "name":"BN406_03131 gidB; 16S rRNA methyltransferase GidB\tK03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]" }, { "name":"BN406_02007 mraW; S-adenosyl-methyltransferase MraW\tK03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]" }, { "name":"BN406_03467 hypothetical protein\tK07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]" }, { "name":"BN406_00534 hypothetical protein\tK06442 tlyA; 23S rRNA (cytidine1920-2'-O)\/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]" }, { "name":"BN406_01068 TrmH family RNA methyltransferase\tK03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]" }, { "name":"BN406_00413 ftsJ; cell division protein\tK02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]" }, { "name":"BN406_02962 rRNA large subunit methyltransferase\tK00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]" }, { "name":"BN406_00022 hypothetical protein\tK06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]" }, { "name":"BN406_00912 hypothetical protein\tK07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]" }, { "name":"BN406_03015 hypothetical protein\tK06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]" }, { "name":"BN406_00533 RNA methyltransferase\tK03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]" }, { "name":"BN406_00457 hypothetical protein\tK06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]" }, { "name":"BN406_05109 pseudouridine synthase Rsu\tK06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]" }, { "name":"BN406_01120 rluC; ribosomal large subunit pseudouridine synthase C protein\tK06179 rluC; 23S rRNA pseudouridine955\/2504\/2580 synthase [EC:5.4.99.24]" }, { "name":"BN406_02582 ylyB; putative RNA pseudouridine synthase YlyB\tK06180 rluD; 23S rRNA pseudouridine1911\/1915\/1917 synthase [EC:5.4.99.23]" }, { "name":"BN406_00036 rimI; acetyltransferase\tK03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase \/ [ribosomal protein L31]-L-lysine N-acetyltransferase [EC:2.3.1.266 2.3.1.338]" }, { "name":"BN406_00574 rimJ; ribosomal-protein-alanine acetyltransferase\tK03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]" }, { "name":"BN406_03044 rimM; 16S rRNA-processing protein RimM\tK02860 rimM; 16S rRNA processing protein RimM" }, { "name":"BN406_01978 prmA; Ribosomal protein L11 methyltransferase\tK02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]" }, { "name":"BN406_01058 rne; ribonuclease E protein\tK08300 rne; ribonuclease E [EC:3.1.26.12]" }, { "name":"BN406_01042 Holliday junction resolvase-like protein\tK07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]" }, { "name":"BN406_00061 DEAD\/DEAH box helicase\tK05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]" }, { "name":"BN406_05552 der; GTPase Der\tK03977 engA; GTPase" }, { "name":"BN406_01197 hflX; GTPase HflX\tK03665 hflX; GTPase" }, { "name":"BN406_00522 hypothetical protein\tK07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]" }, { "name":"BN406_00800 relA; GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein\tK01139 spoT; GTP diphosphokinase \/ guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]" }, { "name":"BN406_03371 rbfA; ribosome-binding factor A\tK02834 rbfA; ribosome-binding factor A" }, { "name":"BN406_03367 hypothetical protein\tK09748 rimP; ribosome maturation factor RimP" }, { "name":"BN406_02961 hypothetical protein\tK09710 ybeB; ribosome-associated protein" }, { "name":"BN406_00040 hypothetical protein\tK07042 ybeY; probable rRNA maturation factor" }, { "name":"BN406_00013 SIGMA54 modulation protein\tK05808 hpf; ribosome hibernation promoting factor" }, { "name":"BN406_02207 engD; GTP-dependent nucleic acid-binding protein engD\tK06942 ychF; ribosome-binding ATPase" } ] }, { "name":"03016 Transfer RNA biogenesis [BR:smi03016]", "children":[ { "name":"BN406_00910 ribonuclease T2\tK01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]" }, { "name":"BN406_02026 ribonuclease T2\tK01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]" }, { "name":"BN406_02759 gltX; Glutamate--tRNA ligase\tK01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]" }, { "name":"BN406_01020 proS; Proline--tRNA ligase\tK01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]" }, { "name":"BN406_00453 ileS; Isoleucine--tRNA ligase\tK01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]" }, { "name":"BN406_03126 leuS; Leucine--tRNA ligase\tK01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]" }, { "name":"BN406_01337 metG; Methionine--tRNA ligase\tK01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]" }, { "name":"BN406_01254 argS; arginyl-tRNA synthetase\tK01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]" }, { "name":"BN406_02760 lysS; Lysine--tRNA ligase\tK04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]" }, { "name":"BN406_00929 aspS; Aspartate--tRNA ligase\tK01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]" }, { "name":"BN406_01531 alaS; Alanine--tRNA ligase\tK01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]" }, { "name":"BN406_01157 thrS; Threonine--tRNA ligase\tK01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]" }, { "name":"BN406_01263 serS; seryl-tRNA synthetase\tK01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]" }, { "name":"BN406_00847 cysS; cysteinyl-tRNA synthetase\tK01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]" }, { "name":"BN406_01247 valS; Valine--tRNA ligase\tK01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]" }, { "name":"BN406_00443 hisS; Histidine--tRNA ligase\tK01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]" }, { "name":"BN406_03417 pheS; phenylalanyl-tRNA synthetase subunit alpha\tK01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]" }, { "name":"BN406_03418 pheT; phenylalanyl-tRNA synthetase subunit beta\tK01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]" }, { "name":"BN406_01481 tyrS; tyrosyl-tRNA synthetase\tK01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]" }, { "name":"BN406_00032 trpS; tryptophanyl-tRNA synthetase\tK01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]" }, { "name":"BN406_01357 hypothetical protein\tK07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]" }, { "name":"BN406_01222 hypothetical protein\tK02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]" }, { "name":"BN406_00038 miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB\tK06168 CDK5RAP1; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]" }, { "name":"BN406_03039 mtaB; Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB\tK15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase [EC:2.8.4.5]" }, { "name":"BN406_00045 trmB; tRNA (guanine-N(7)-)-methyltransferase\tK03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]" }, { "name":"BN406_00054 truA; tRNA pseudouridine synthase A\tK06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]" }, { "name":"BN406_03372 truB; tRNA pseudouridine synthase B\tK03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]" }, { "name":"BN406_01478 nifS; pyridoxal-phosphate-dependent aminotransferase\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]" }, { "name":"BN406_00522 hypothetical protein\tK07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]" }, { "name":"BN406_01940 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase\tK00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]" }, { "name":"BN406_03133 mnmE; tRNA modification GTPase MnmE\tK03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]" }, { "name":"BN406_03132 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG\tK03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme" }, { "name":"BN406_05068 selD; selenophosphate synthetase\tK01008 selD; selenide, water dikinase [EC:2.7.9.3]" }, { "name":"BN406_02335 cysQ; transmembrane protein\tK01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]" }, { "name":"BN406_05923 3'(2'),5'-bisphosphate nucleotidase\tK01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]" }, { "name":"BN406_00077 rnpA; ribonuclease P\tK03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]" }, { "name":"BN406_00009 rph; ribonuclease PH\tK00989 rph; ribonuclease PH [EC:2.7.7.56]" }, { "name":"BN406_00925 rnd; Ribonuclease D\tK03684 rnd; ribonuclease D [EC:3.1.13.5]" }, { "name":"BN406_03394 hypothetical protein\tK03684 rnd; ribonuclease D [EC:3.1.13.5]" }, { "name":"BN406_03019 ligT; 2'-5' RNA ligase\tK01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]" }, { "name":"BN406_02025 putative ABC transporter ATP-binding protein Rv2477c\/MT2552\tK06020 ettA; energy-dependent translational throttle protein EttA" }, { "name":"BN406_00505 glyQ; glycyl-tRNA synthetase subunit alpha\tK01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]" }, { "name":"BN406_00509 glyS; glycyl-tRNA synthetase subunit beta\tK01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]" }, { "name":"BN406_02495 gluQ; Glutamyl-Q tRNA(Asp) synthetase\tK01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]" }, { "name":"BN406_03436 hypothetical protein\tK03976 ybaK; Cys-tRNA(Pro)\/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]" }, { "name":"BN406_00108 hypothetical protein\tK19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]" }, { "name":"BN406_02983 hypothetical protein\tK19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]" }, { "name":"BN406_00456 deaminase\tK11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]" }, { "name":"BN406_01634 dusA; tRNA-dihydrouridine synthase A\tK05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]" }, { "name":"BN406_01189 dus; putative tRNA-dihydrouridine synthase\tK05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]" }, { "name":"BN406_03530 type 12 methyltransferase\tK15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]" }, { "name":"BN406_04331 hypothetical protein\tK15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]" }, { "name":"BN406_06428 type 11 methyltransferase\tK15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]" }, { "name":"BN406_01523 hypothetical protein\tK02533 lasT; tRNA\/rRNA methyltransferase [EC:2.1.1.-]" }, { "name":"BN406_01274 trmFO; Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO\tK04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]" }, { "name":"BN406_03045 trmD; tRNA (guanine-N(1)-)-methyltransferase\tK00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]" }, { "name":"BN406_01555 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase\tK03216 trmL; tRNA (cytidine\/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]" }, { "name":"BN406_00023 tRNA\/rRNA methyltransferase\tK03437 spoU; RNA methyltransferase, TrmH family" }, { "name":"BN406_02570 mnmA; tRNA-specific 2-thiouridylase MnmA\tK00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]" }, { "name":"BN406_01518 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA\tK14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA" }, { "name":"BN406_02542 hypothetical protein\tK04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]" }, { "name":"BN406_01472 hypothetical protein\tK13628 iscA; iron-sulfur cluster assembly protein" }, { "name":"BN406_00840 folate-binding protein YgfZ\tK06980 ygfZ; tRNA-modifying protein YgfZ" }, { "name":"BN406_01319 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase\tK07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]" }, { "name":"BN406_05604 exsB; hypothetical protein\tK06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]" }, { "name":"BN406_05605 exsC; 6-pyruvoyl tetrahydropterin synthase\tK01737 queD; 6-pyruvoyltetrahydropterin\/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]" }, { "name":"BN406_05606 exsD; hypothetical protein\tK10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]" }, { "name":"BN406_02233 7-cyano-7-deazaguanine reductase\tK09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]" }, { "name":"BN406_03457 4Fe-4S ferredoxin\tK18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]" }, { "name":"BN406_01320 tgt; queuine tRNA-ribosyltransferase\tK00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]" }, { "name":"BN406_02593 tilS; tRNA(Ile)-lysidine synthase\tK04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]" }, { "name":"BN406_00035 hypothetical protein\tK14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB" }, { "name":"BN406_02934 gcp; putative tRNA threonylcarbamoyladenosine biosynthesis protein Gcp\tK25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]" }, { "name":"BN406_01033 rnr; exoribonuclease II protein\tK12573 rnr; ribonuclease R [EC:3.1.13.1]" }, { "name":"BN406_03375 pnp; Polyribonucleotide nucleotidyltransferase\tK00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]" }, { "name":"BN406_02267 ntrR1; nitrogen regulatory protein\tK18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]" }, { "name":"BN406_02543 PilT protein domain-containing protein\tK18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]" }, { "name":"BN406_03109 virulence associated protein\tK18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]" }, { "name":"BN406_04347 PilT protein domain-containing protein\tK18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]" } ] }, { "name":"03012 Translation factors [BR:smi03012]", "children":[ { "name":"BN406_03370 infB; Translation initiation factor IF-2\tK02519 infB; translation initiation factor IF-2" }, { "name":"BN406_03414 infC; translation initiation factor IF-3\tK02520 infC; translation initiation factor IF-3" }, { "name":"BN406_00894 yheS; putative ABC transporter ATP-binding protein YheS\tK06158 ABCF3; ATP-binding cassette, subfamily F, member 3" }, { "name":"BN406_01228 tsf; elongation factor Ts\tK02357 tsf; elongation factor Ts" }, { "name":"BN406_01069 tuf1; Elongation factor Tu\tK02358 tuf; elongation factor Tu" }, { "name":"BN406_01085 tuf1; Elongation factor Tu\tK02358 tuf; elongation factor Tu" }, { "name":"BN406_01084 fusA; Elongation factor G\tK02355 fusA; elongation factor G" }, { "name":"BN406_06605 elongation factor G domain IV\tK02355 fusA; elongation factor G" }, { "name":"BN406_05080 selenocysteine-specific translation elongation factor\tK03833 selB; selenocysteine-specific elongation factor" }, { "name":"BN406_02469 prfA; Peptide chain release factor 1\tK02835 prfA; peptide chain release factor 1" }, { "name":"BN406_01230 frr; ribosome recycling factor\tK02838 frr; ribosome recycling factor" }, { "name":"BN406_02468 prmC; Release factor glutamine methyltransferase\tK02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]" }, { "name":"BN406_05356 HemK family modification methylase\tK02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]" }, { "name":"BN406_02205 pth; peptidyl-tRNA hydrolase\tK01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]" }, { "name":"BN406_00231 infA; translation initiation factor IF-1\tK02518 infA; translation initiation factor IF-1" }, { "name":"BN406_03409 efp; elongation factor P\tK02356 efp; elongation factor P" }, { "name":"BN406_03408 genX; lysyl-tRNA synthetase\tK04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]" }, { "name":"BN406_01061 prfB; Peptide chain release factor 2\tK02836 prfB; peptide chain release factor 2" }, { "name":"BN406_03477 prfC; Peptide chain release factor 3\tK02837 prfC; peptide chain release factor 3" }, { "name":"BN406_03180 peptidyl-tRNA hydrolase domain protein\tK15034 yaeJ; ribosome-associated protein" } ] }, { "name":"03110 Chaperones and folding catalysts [BR:smi03110]", "children":[ { "name":"BN406_01219 ClpA homolog protein\tK03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA" }, { "name":"BN406_02466 clpB; Chaperone protein ClpB\tK03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB" }, { "name":"BN406_00991 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX\tK03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX" }, { "name":"BN406_03192 hslU; ATP-dependent protease ATPase subunit HslU\tK03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU" }, { "name":"BN406_05809 htpG; molecular chaperone HtpG\tK04079 HSP90A; molecular chaperone HtpG" }, { "name":"BN406_03312 dnaK; Chaperone protein DnaK\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"BN406_00691 heat shock protein\tK04046 yegD; hypothetical chaperone protein" }, { "name":"BN406_00448 groL1; 60 kDa chaperonin 1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_00931 groL2; 60 kDa chaperonin 2\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_04188 groL1; 60 kDa chaperonin 1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_04784 groL6; 60 kDa chaperonin 6\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_05019 groL3; 60 kDa chaperonin 3\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_05660 groL5; 60 kDa chaperonin 5\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_03313 dnaJ; Chaperone protein DnaJ\tK03686 dnaJ; molecular chaperone DnaJ" }, { "name":"BN406_02013 hypothetical protein\tK05801 djlA; DnaJ like chaperone protein" }, { "name":"BN406_00152 hslO; Hsp33-like chaperonin\tK04083 hslO; molecular chaperone Hsp33" }, { "name":"BN406_00011 grpE; heat shock protein GrpE\tK03687 GRPE; molecular chaperone GrpE" }, { "name":"BN406_02679 ibpA; heat shock protein\tK04080 ibpA; molecular chaperone IbpA" }, { "name":"BN406_05859 Hsp20 family heat-shock protein\tK04080 ibpA; molecular chaperone IbpA" }, { "name":"BN406_03060 HEAT shock-like protein\tK04762 hslR; ribosome-associated heat shock protein Hsp15" }, { "name":"BN406_00449 hypothetical protein\tK04078 groES; chaperonin GroES" }, { "name":"BN406_04189 unnamed protein product\tK04078 groES; chaperonin GroES" }, { "name":"BN406_04190 unnamed protein product\tK04078 groES; chaperonin GroES" }, { "name":"BN406_05018 groS3; 10 kDa chaperonin 3\tK04078 groES; chaperonin GroES" }, { "name":"BN406_05659 groS5; 10 kDa chaperonin 5\tK04078 groES; chaperonin GroES" }, { "name":"BN406_00679 degP1; putative periplasmic serine endoprotease DegP-like\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"BN406_01943 degP2; protease precursor signal peptide protein\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"BN406_02592 ftsH; ATP-dependent zinc metalloprotease FtsH\tK03798 ftsH; cell division protease FtsH [EC:3.4.24.-]" }, { "name":"BN406_00489 atpB; F0F1 ATP synthase subunit A\tK02108 ATPF0A; F-type H+-transporting ATPase subunit a" }, { "name":"BN406_04607 Pilus assembly chaperone\tK07346 fimC; fimbrial chaperone protein" }, { "name":"BN406_03142 secB; preprotein translocase subunit SecB\tK03071 secB; preprotein translocase subunit SecB" }, { "name":"BN406_05663 hypothetical protein\tK06006 cpxP; periplasmic protein CpxP\/Spy" }, { "name":"BN406_01283 hypothetical protein\tK09796 pccA; periplasmic copper chaperone A" }, { "name":"BN406_04375 nuclear export factor GLE1\tK09796 pccA; periplasmic copper chaperone A" }, { "name":"BN406_03717 hypothetical protein\tK13274 wprA; cell wall-associated protease [EC:3.4.21.-]" }, { "name":"BN406_05831 hexA; beta-N-acetylhexosaminidase\tK12373 HEXA_B; hexosaminidase [EC:3.2.1.52]" }, { "name":"BN406_01411 putative peptidyl-prolyl cis-trans isomerase protein\tK03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]" }, { "name":"BN406_02484 hypothetical protein\tK03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]" }, { "name":"BN406_00886 hypothetical protein\tK03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]" }, { "name":"BN406_03167 trxA; thioredoxin\tK03671 TXN; thioredoxin" }, { "name":"BN406_02984 thioredoxin protein\tK05838 ybbN; putative thioredoxin" }, { "name":"BN406_02476 hypothetical protein\tK03676 grxC; glutaredoxin 3" }, { "name":"BN406_01514 hypothetical protein\tK07390 grxD; monothiol glutaredoxin" }, { "name":"BN406_03035 cycY; Thiol:disulfide interchange protein CycY\tK02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE" } ] }, { "name":"04131 Membrane trafficking [BR:smi04131]", "children":[ { "name":"BN406_00899 ndk; nucleoside diphosphate kinase\tK00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]" }, { "name":"BN406_02625 fbaB; fructose-bisphosphate aldolase class I protein\tK01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]" }, { "name":"BN406_06665 fda; Fructose-bisphosphate aldolase class 1\tK01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]" }, { "name":"BN406_02621 gap; glyceraldehyde-3-phosphate dehydrogenase\tK00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]" }, { "name":"BN406_03295 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase\tK01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]" }, { "name":"BN406_02647 pykA; pyruvate kinase\tK00873 PK; pyruvate kinase [EC:2.7.1.40]" }, { "name":"BN406_05809 htpG; molecular chaperone HtpG\tK04079 HSP90A; molecular chaperone HtpG" }, { "name":"BN406_03116 transmembrane protein\tK06902 UMF1; MFS transporter, UMF1 family" } ] }, { "name":"04121 Ubiquitin system" }, { "name":"03051 Proteasome [BR:smi03051]", "children":[ { "name":"BN406_05809 htpG; molecular chaperone HtpG\tK04079 HSP90A; molecular chaperone HtpG" } ] }, { "name":"03032 DNA replication proteins [BR:smi03032]", "children":[ { "name":"BN406_00569 rnhA; Ribonuclease H\tK03469 rnhA; ribonuclease HI [EC:3.1.26.4]" }, { "name":"BN406_00993 unnamed protein product\tK03530 hupB; DNA-binding protein HU-beta" }, { "name":"BN406_00959 ihfA; Integration host factor subunit alpha\tK04764 ihfA; integration host factor subunit alpha" }, { "name":"BN406_00019 ihfB; Integration host factor subunit beta\tK05788 ihfB; integration host factor subunit beta" }, { "name":"BN406_00001 dnaA; Chromosomal replication initiator protein DnaA\tK02313 dnaA; chromosomal replication initiator protein" }, { "name":"BN406_00867 dnaB; replicative DNA helicase\tK02314 dnaB; replicative DNA helicase [EC:5.6.2.3]" }, { "name":"BN406_02169 dnaG; DNA primase\tK02316 dnaG; DNA primase [EC:2.7.7.101]" }, { "name":"BN406_03502 Putative replication protein C\tK18996 repC; replication initiation protein RepC" }, { "name":"BN406_05091 Putative replication protein C\tK18996 repC; replication initiation protein RepC" }, { "name":"BN406_06610 repC; Putative replication protein C\tK18996 repC; replication initiation protein RepC" }, { "name":"BN406_01291 ssb; single-stranded DNA-binding protein\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"BN406_01023 dnaE1; DNA polymerase III subunit alpha\tK02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]" }, { "name":"BN406_03466 dnaN; DNA polymerase III subunit beta\tK02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]" }, { "name":"BN406_00891 DNA polymerase III subunit chi\tK02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]" }, { "name":"BN406_03128 holA; DNA polymerase III subunit delta\tK02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]" }, { "name":"BN406_01338 DNA polymerase III subunit delta'\tK02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]" }, { "name":"BN406_03141 dnaQ; DNA polymerase III subunit epsilon\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]" }, { "name":"BN406_04940 DNA polymerase III subunit epsilon\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]" }, { "name":"BN406_03361 DNA polymerase III subunits gamma and tau\tK02343 dnaX; DNA polymerase III subunit gamma\/tau [EC:2.7.7.7]" }, { "name":"BN406_00493 rnhB; ribonuclease HII\tK03470 rnhB; ribonuclease HII [EC:3.1.26.4]" }, { "name":"BN406_03305 polA; DNA polymerase I\tK02335 polA; DNA polymerase I [EC:2.7.7.7]" }, { "name":"BN406_01987 ligA; NAD-dependent DNA ligase LigA\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]" }, { "name":"BN406_01293 gyrA; DNA gyrase subunit A\tK02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]" }, { "name":"BN406_03148 gyrB3; DNA gyrase subunit B\tK02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]" }, { "name":"BN406_00934 parC; DNA topoisomerase 4 subunit A\tK02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]" }, { "name":"BN406_01165 gyrB1; DNA gyrase subunit B\tK02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]" }, { "name":"BN406_01034 topA; DNA topoisomerase I\tK03168 topA; DNA topoisomerase I [EC:5.6.2.1]" }, { "name":"BN406_05419 DNA topoisomerase I protein\tK03168 topA; DNA topoisomerase I [EC:5.6.2.1]" } ] }, { "name":"03036 Chromosome and associated proteins [BR:smi03036]", "children":[ { "name":"BN406_00807 rncS; ribonuclease III\tK03685 rnc; ribonuclease III [EC:3.1.26.3]" }, { "name":"BN406_02625 fbaB; fructose-bisphosphate aldolase class I protein\tK01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]" }, { "name":"BN406_06665 fda; Fructose-bisphosphate aldolase class 1\tK01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]" }, { "name":"BN406_00993 unnamed protein product\tK03530 hupB; DNA-binding protein HU-beta" }, { "name":"BN406_00959 ihfA; Integration host factor subunit alpha\tK04764 ihfA; integration host factor subunit alpha" }, { "name":"BN406_00019 ihfB; Integration host factor subunit beta\tK05788 ihfB; integration host factor subunit beta" }, { "name":"BN406_05024 hypothetical protein\tK18997 cbpM; chaperone modulatory protein CbpM" }, { "name":"BN406_00001 dnaA; Chromosomal replication initiator protein DnaA\tK02313 dnaA; chromosomal replication initiator protein" }, { "name":"BN406_01380 hypothetical protein\tK11940 hspQ; heat shock protein HspQ" }, { "name":"BN406_01196 hfq; RNA-binding protein Hfq\tK03666 hfq; host factor-I protein" }, { "name":"BN406_01363 lrp2; probabable transcriptional regulator\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein" }, { "name":"BN406_02548 lrp3; leucine-responsive regulatory protein\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein" }, { "name":"BN406_03475 transcription regulator protein\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein" }, { "name":"BN406_05112 transcriptional regulator protein\tK03719 lrp; Lrp\/AsnC family transcriptional regulator, leucine-responsive regulatory protein" }, { "name":"BN406_00587 smc; chromosome partition protein\tK03529 smc; chromosome segregation protein" }, { "name":"BN406_01257 hypothetical protein\tK05896 scpA; segregation and condensation protein A" }, { "name":"BN406_01258 hypothetical protein\tK06024 scpB; segregation and condensation protein B" }, { "name":"BN406_01992 ftsA; Cell division protein FtsA\tK03590 ftsA; cell division protein FtsA" }, { "name":"BN406_02513 cell division ATP-binding protein FtsE\tK09812 ftsE; cell division transport system ATP-binding protein" }, { "name":"BN406_02005 ftsI; penicillin-binding transmembrane protein\tK03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]" }, { "name":"BN406_03551 peptidoglycan glycosyltransferase\tK03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]" }, { "name":"BN406_02991 ftsK; DNA translocase FtsK\tK03466 ftsK; DNA segregation ATPase FtsK\/SpoIIIE, S-DNA-T family" }, { "name":"BN406_05200 ftsK; DNA translocase FtsK\tK03466 ftsK; DNA segregation ATPase FtsK\/SpoIIIE, S-DNA-T family" }, { "name":"BN406_02006 hypothetical protein\tK03586 ftsL; cell division protein FtsL" }, { "name":"BN406_01993 ftsQ; cell division transmembrane protein\tK03589 ftsQ; cell division protein FtsQ" }, { "name":"BN406_02000 ftsW; cell division protein FtsW\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"BN406_02514 hypothetical protein\tK09811 ftsX; cell division transport system permease protein" }, { "name":"BN406_01870 ftsZ2; Cell division protein FtsZ 2\tK03531 ftsZ; cell division protein FtsZ" }, { "name":"BN406_01991 ftsZ1; Cell division protein FtsZ 1\tK03531 ftsZ; cell division protein FtsZ" }, { "name":"BN406_02618 hypothetical protein\tK09888 zapA; cell division protein ZapA" }, { "name":"BN406_02913 hypothetical protein\tK06916 zapE; cell division protein ZapE" }, { "name":"BN406_01059 amiC; N-acetylmuramoyl-L-alanine amidase AMIC precursor transmembrane protein\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"BN406_01963 transporter\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_02310 transport transmembrane protein\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_03323 RND family efflux transporter MFP subunit\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_04279 nolF; Nodulation protein nolF\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_04639 bepF; Efflux pump periplasmic linker BepF\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_05369 RND family efflux transporter MFP subunit\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_05346 minC; septum formation inhibitor\tK03610 minC; septum site-determining protein MinC" }, { "name":"BN406_05347 minD; Septum site-determining protein MinD\tK03609 minD; septum site-determining protein MinD" }, { "name":"BN406_05348 minE; cell division topological specificity factor MinE\tK03608 minE; cell division topological specificity factor" }, { "name":"BN406_02034 hypothetical protein\tK03496 parA; chromosome partitioning protein" }, { "name":"BN406_03130 parA; Chromosome partitioning protein ParA\tK03496 parA; chromosome partitioning protein" }, { "name":"BN406_03500 Putative replication protein A\tK03496 parA; chromosome partitioning protein" }, { "name":"BN406_05089 repA1; Putative replication protein A\tK03496 parA; chromosome partitioning protein" }, { "name":"BN406_05198 repA3; Putative replication protein A\tK03496 parA; chromosome partitioning protein" }, { "name":"BN406_06608 Putative replication protein A\tK03496 parA; chromosome partitioning protein" }, { "name":"BN406_03129 parB; Chromosome-partitioning protein parB\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"BN406_03501 plasmid partitioning protein RepB\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"BN406_05090 plasmid partitioning protein RepB\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"BN406_05197 plasmid partitioning protein RepB\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"BN406_06609 repB; replication protein B\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"BN406_06810 plasmid partitioning protein\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"BN406_00934 parC; DNA topoisomerase 4 subunit A\tK02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]" }, { "name":"BN406_01165 gyrB1; DNA gyrase subunit B\tK02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]" }, { "name":"BN406_03132 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG\tK03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme" }, { "name":"BN406_03131 gidB; 16S rRNA methyltransferase GidB\tK03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]" }, { "name":"BN406_01274 trmFO; Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO\tK04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]" }, { "name":"BN406_02902 xerC; Tyrosine recombinase XerC\tK03733 xerC; integrase\/recombinase XerC" }, { "name":"BN406_02539 xerD; Tyrosine recombinase XerD\tK04763 xerD; integrase\/recombinase XerD" }, { "name":"BN406_00484 mrp; Protein mrp homolog\tK03593 mrp; ATP-binding protein involved in chromosome partitioning" }, { "name":"BN406_02223 fic; cell filamentation protein\tK04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]" }, { "name":"BN406_03787 hypothetical protein\tK04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]" }, { "name":"BN406_00074 engB; putative GTP-binding protein EngB\tK03978 engB; GTP-binding protein" } ] }, { "name":"03400 DNA repair and recombination proteins [BR:smi03400]", "children":[ { "name":"BN406_05285 methylated-DNA--protein-cysteinemethyltransferase\tK00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]" }, { "name":"BN406_02782 ung; Uracil-DNA glycosylase\tK03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]" }, { "name":"BN406_03641 uracil-DNA glycosylase\tK03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]" }, { "name":"BN406_05284 3-methyladenine DNA glycosylase\tK03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]" }, { "name":"BN406_03298 nth; Endonuclease III\tK10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]" }, { "name":"BN406_02481 mutT; mutator protein 7,8-dihydro-8-oxoguanine-triphosphatase\tK03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]" }, { "name":"BN406_03476 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase\tK01520 dut; dUTP diphosphatase [EC:3.6.1.23]" }, { "name":"BN406_00068 methylated-DNA--protein-cysteinemethyltransferase\tK10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response \/ methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]" }, { "name":"BN406_03296 methylated-DNA--protein-cysteine methyltransferase transcription regulator\tK10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response \/ methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]" }, { "name":"BN406_03182 alkB; alkylated DNA repair protein\tK03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]" }, { "name":"BN406_00690 hypothetical protein\tK21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]" }, { "name":"BN406_05416 phage SPO1 DNA polymerase-like protein\tK21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]" }, { "name":"BN406_02494 DNA-3-methyladenine glycosidase II protein\tK01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]" }, { "name":"BN406_00439 tag; DNA-3-methyladenine glycosylase I protein\tK01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]" }, { "name":"BN406_03497 fpg; formamidopyrimidine-DNA glycosylase\tK10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]" }, { "name":"BN406_01250 xthA2; exodeoxyribonuclease III protein\tK01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]" }, { "name":"BN406_01400 xthA1; exodeoxyribonuclease III protein\tK01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]" }, { "name":"BN406_03001 xthA3; exodeoxyribonuclease III protein\tK01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]" }, { "name":"BN406_05303 exodeoxyribonuclease III Xth\tK01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]" }, { "name":"BN406_01462 recJ; single-stranded-DNA-specific exonuclease\tK07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]" }, { "name":"BN406_01987 ligA; NAD-dependent DNA ligase LigA\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]" }, { "name":"BN406_03305 polA; DNA polymerase I\tK02335 polA; DNA polymerase I [EC:2.7.7.7]" }, { "name":"BN406_01290 uvrA; UvrABC system protein A\tK03701 uvrA; excinuclease ABC subunit A" }, { "name":"BN406_01630 uvrB; UvrABC system protein B\tK03702 uvrB; excinuclease ABC subunit B" }, { "name":"BN406_00906 uvrC; excinuclease ABC subunit C\tK03703 uvrC; excinuclease ABC subunit C" }, { "name":"BN406_01966 uvrD1; DNA helicase II protein\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]" }, { "name":"BN406_01967 uvrD1; DNA helicase II protein\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]" }, { "name":"BN406_03541 uvrD2; UvrD2 DNA helicase\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]" }, { "name":"BN406_01078 rpoB; DNA-directed RNA polymerase subunit beta\tK03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]" }, { "name":"BN406_01079 rpoC; DNA-directed RNA polymerase subunit beta'\tK03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]" }, { "name":"BN406_01111 rpoA; DNA-directed RNA polymerase subunit alpha\tK03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]" }, { "name":"BN406_00799 rpoZ; DNA-directed RNA polymerase subunit omega\tK03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]" }, { "name":"BN406_01403 mfd; transcription-repair coupling factor\tK03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]" }, { "name":"BN406_00028 mutS; DNA mismatch repair protein MutS\tK03555 mutS; DNA mismatch repair protein MutS" }, { "name":"BN406_00470 mutL; DNA mismatch repair protein mutL\tK03572 mutL; DNA mismatch repair protein MutL" }, { "name":"BN406_03429 xseA; exodeoxyribonuclease VII large subunit\tK03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]" }, { "name":"BN406_00537 exodeoxyribonuclease VII small subunit\tK03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]" }, { "name":"BN406_01023 dnaE1; DNA polymerase III subunit alpha\tK02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]" }, { "name":"BN406_03466 dnaN; DNA polymerase III subunit beta\tK02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]" }, { "name":"BN406_00891 DNA polymerase III subunit chi\tK02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]" }, { "name":"BN406_03128 holA; DNA polymerase III subunit delta\tK02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]" }, { "name":"BN406_01338 DNA polymerase III subunit delta'\tK02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]" }, { "name":"BN406_03141 dnaQ; DNA polymerase III subunit epsilon\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]" }, { "name":"BN406_04940 DNA polymerase III subunit epsilon\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]" }, { "name":"BN406_03361 DNA polymerase III subunits gamma and tau\tK02343 dnaX; DNA polymerase III subunit gamma\/tau [EC:2.7.7.7]" }, { "name":"BN406_01291 ssb; single-stranded DNA-binding protein\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"BN406_01532 recA; recombinase A\tK03553 recA; recombination protein RecA" }, { "name":"BN406_02607 ruvA; Holliday junction DNA helicase RuvA\tK03550 ruvA; holliday junction DNA helicase RuvA" }, { "name":"BN406_02606 ruvB; Holliday junction ATP-dependent DNA helicase RuvB\tK03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]" }, { "name":"BN406_02608 ruvC; Holliday junction resolvase\tK01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]" }, { "name":"BN406_00738 unnamed protein product\tK01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]" }, { "name":"BN406_02895 priA; Primosomal protein N'\tK04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]" }, { "name":"BN406_00862 radA; DNA repair protein RadA homolog\tK04485 radA; DNA repair protein RadA\/Sms" }, { "name":"BN406_03318 recF; DNA replication and repair protein RecF\tK03629 recF; DNA replication and repair protein RecF" }, { "name":"BN406_01405 recG; ATP-dependent DNA helicase RecG\tK03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]" }, { "name":"BN406_00823 recO; DNA repair protein RecO\tK03584 recO; DNA repair protein RecO (recombination protein O)" }, { "name":"BN406_03364 recR; recombination protein RecR\tK06187 recR; recombination protein RecR" }, { "name":"BN406_01988 recN; DNA repair protein\tK03631 recN; DNA repair protein RecN (Recombination protein N)" }, { "name":"BN406_03168 ATP-dependent nuclease\/helicase\tK16898 addA; ATP-dependent helicase\/nuclease subunit A [EC:5.6.2.4 3.1.-.-]" }, { "name":"BN406_03169 hypothetical protein\tK16899 addB; ATP-dependent helicase\/nuclease subunit B [EC:5.6.2.4 3.1.-.-]" }, { "name":"BN406_00621 hypothetical protein\tK06915 herA; DNA double-strand break repair helicase HerA and related ATPase" }, { "name":"BN406_03947 putative DNA repair protein Avi_8016\tK10979 ku; DNA end-binding protein Ku" }, { "name":"BN406_05306 putative DNA repair protein BRADO5824\tK10979 ku; DNA end-binding protein Ku" }, { "name":"BN406_05446 putative DNA repair protein Msil_1735\tK10979 ku; DNA end-binding protein Ku" }, { "name":"BN406_05447 putative DNA repair protein RSKD131_1858\tK10979 ku; DNA end-binding protein Ku" }, { "name":"BN406_00784 DNA polymerase LigD ligase region\tK01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]" }, { "name":"BN406_01776 DNA polymerase LigD ligase region\tK01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]" }, { "name":"BN406_02600 hypothetical protein\tK01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]" }, { "name":"BN406_03940 hypothetical protein\tK01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]" }, { "name":"BN406_03945 ATP-dependent DNA ligase\tK01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]" }, { "name":"BN406_05469 hypothetical protein\tK01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]" }, { "name":"BN406_05994 putative ATP-dependent DNA ligase protein\tK01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]" }, { "name":"BN406_01293 gyrA; DNA gyrase subunit A\tK02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]" }, { "name":"BN406_03148 gyrB3; DNA gyrase subunit B\tK02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]" }, { "name":"BN406_01034 topA; DNA topoisomerase I\tK03168 topA; DNA topoisomerase I [EC:5.6.2.1]" }, { "name":"BN406_05419 DNA topoisomerase I protein\tK03168 topA; DNA topoisomerase I [EC:5.6.2.1]" }, { "name":"BN406_00993 unnamed protein product\tK03530 hupB; DNA-binding protein HU-beta" }, { "name":"BN406_00959 ihfA; Integration host factor subunit alpha\tK04764 ihfA; integration host factor subunit alpha" }, { "name":"BN406_00019 ihfB; Integration host factor subunit beta\tK05788 ihfB; integration host factor subunit beta" }, { "name":"BN406_02168 recQ; ATP-dependent DNA helicase recQ\tK03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]" }, { "name":"BN406_01025 dinB1; DNA polymerase IV 1\tK02346 dinB; DNA polymerase IV [EC:2.7.7.7]" }, { "name":"BN406_03526 dinB2; DNA polymerase IV 2\tK02346 dinB; DNA polymerase IV [EC:2.7.7.7]" }, { "name":"BN406_04284 dinB2; DNA polymerase IV 2\tK02346 dinB; DNA polymerase IV [EC:2.7.7.7]" }, { "name":"BN406_01347 lexA; LexA repressor\tK01356 lexA; repressor LexA [EC:3.4.21.88]" }, { "name":"BN406_02972 hypothetical protein\tK14160 imuA; protein ImuA" }, { "name":"BN406_04286 hypothetical protein\tK14160 imuA; protein ImuA" }, { "name":"BN406_02971 imuB; Protein imuB\tK14161 imuB; protein ImuB" }, { "name":"BN406_04287 imuB; Protein imuB\tK14161 imuB; protein ImuB" }, { "name":"BN406_02970 dnaE2-1; Error-prone DNA polymerase 1\tK14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]" }, { "name":"BN406_04288 dnaE2-2; Error-prone DNA polymerase 2\tK14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]" }, { "name":"BN406_00175 DEAD\/DEAH box helicase\tK03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]" }, { "name":"BN406_01288 nrd; ribonucleotide-diphosphate reductase subunit alpha\tK00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]" } ] }, { "name":"03029 Mitochondrial biogenesis [BR:smi03029]", "children":[ { "name":"BN406_01551 fbcB; cytochrome B transmembrane protein\tK00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit" }, { "name":"BN406_03370 infB; Translation initiation factor IF-2\tK02519 infB; translation initiation factor IF-2" }, { "name":"BN406_03414 infC; translation initiation factor IF-3\tK02520 infC; translation initiation factor IF-3" }, { "name":"BN406_01228 tsf; elongation factor Ts\tK02357 tsf; elongation factor Ts" }, { "name":"BN406_01069 tuf1; Elongation factor Tu\tK02358 tuf; elongation factor Tu" }, { "name":"BN406_01085 tuf1; Elongation factor Tu\tK02358 tuf; elongation factor Tu" }, { "name":"BN406_01084 fusA; Elongation factor G\tK02355 fusA; elongation factor G" }, { "name":"BN406_06605 elongation factor G domain IV\tK02355 fusA; elongation factor G" }, { "name":"BN406_00955 hypothetical protein\tK17662 CBP3; cytochrome b pre-mRNA-processing protein 3" }, { "name":"BN406_03061 hypothetical protein\tK17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1\/SUV3 [EC:5.6.2.6]" }, { "name":"BN406_00808 era; GTPase Era\tK03595 era; GTPase" }, { "name":"BN406_01481 tyrS; tyrosyl-tRNA synthetase\tK01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]" }, { "name":"BN406_03126 leuS; Leucine--tRNA ligase\tK01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]" }, { "name":"BN406_00929 aspS; Aspartate--tRNA ligase\tK01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]" }, { "name":"BN406_01254 argS; arginyl-tRNA synthetase\tK01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]" }, { "name":"BN406_01045 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A\tK02433 gatA; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]" }, { "name":"BN406_02949 amidase\tK02433 gatA; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]" }, { "name":"BN406_03336 hypothetical protein\tK02433 gatA; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]" }, { "name":"BN406_01047 gatB; aspartyl\/glutamyl-tRNA amidotransferase subunit B\tK02434 gatB; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]" }, { "name":"BN406_01044 gatC; aspartyl\/glutamyl-tRNA amidotransferase subunit C\tK02435 gatC; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]" }, { "name":"BN406_01291 ssb; single-stranded DNA-binding protein\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"BN406_01234 omp; outer membrane transmembrane protein\tK07277 SAM50; outer membrane protein insertion porin family" }, { "name":"BN406_03312 dnaK; Chaperone protein DnaK\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"BN406_00011 grpE; heat shock protein GrpE\tK03687 GRPE; molecular chaperone GrpE" }, { "name":"BN406_00448 groL1; 60 kDa chaperonin 1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_00931 groL2; 60 kDa chaperonin 2\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_04188 groL1; 60 kDa chaperonin 1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_04784 groL6; 60 kDa chaperonin 6\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_05019 groL3; 60 kDa chaperonin 3\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_05660 groL5; 60 kDa chaperonin 5\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_00449 hypothetical protein\tK04078 groES; chaperonin GroES" }, { "name":"BN406_04189 unnamed protein product\tK04078 groES; chaperonin GroES" }, { "name":"BN406_04190 unnamed protein product\tK04078 groES; chaperonin GroES" }, { "name":"BN406_05018 groS3; 10 kDa chaperonin 3\tK04078 groES; chaperonin GroES" }, { "name":"BN406_05659 groS5; 10 kDa chaperonin 5\tK04078 groES; chaperonin GroES" }, { "name":"BN406_03313 dnaJ; Chaperone protein DnaJ\tK03686 dnaJ; molecular chaperone DnaJ" }, { "name":"BN406_01478 nifS; pyridoxal-phosphate-dependent aminotransferase\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]" }, { "name":"BN406_01514 hypothetical protein\tK07390 grxD; monothiol glutaredoxin" }, { "name":"BN406_00484 mrp; Protein mrp homolog\tK03593 mrp; ATP-binding protein involved in chromosome partitioning" }, { "name":"BN406_00561 ctaB; Protoheme IX farnesyltransferase\tK02257 COX10; heme o synthase [EC:2.5.1.141]" }, { "name":"BN406_00563 ctaG; cytochrome C oxidase assembly protein\tK02258 COX11; cytochrome c oxidase assembly protein subunit 11" }, { "name":"BN406_00975 cytochrome C oxidase assembly transmembrane protein\tK02259 COX15; heme a synthase [EC:1.17.99.9]" }, { "name":"BN406_00076 inner membrane protein translocase component YidC\tK03217 yidC; YidC\/Oxa1 family membrane protein insertase" }, { "name":"BN406_00566 surfeit locus 1 family protein\tK14998 SURF1; surfeit locus 1 family protein" }, { "name":"BN406_05376 surfeit locus 1 family protein\tK14998 SURF1; surfeit locus 1 family protein" }, { "name":"BN406_01977 senC; cytochrome C oxidase assembly factor transmembrane protein\tK07152 SCO1; protein SCO1" }, { "name":"BN406_04786 electron transport protein SCO1\/SenC\tK07152 SCO1; protein SCO1" }, { "name":"BN406_05809 htpG; molecular chaperone HtpG\tK04079 HSP90A; molecular chaperone HtpG" } ] } ] }, { "name":"09183 Protein families: signaling and cellular processes", "children":[ { "name":"02000 Transporters [BR:smi02000]", "children":[ { "name":"BN406_03293 putative ABC transporter ATP-binding protein y4gM\tK11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]" }, { "name":"BN406_05801 xenobiotic-transporting ATPase\tK11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]" }, { "name":"BN406_03079 ndvA; Beta-(1-->2)glucan export ATP-binding\/permease protein NdvA\tK24819 ndvA; ATP-binding cassette, subfamily B, beta-glucan exporter [EC:7.5.2.3]" }, { "name":"BN406_00834 putative toxin secretion ATP-binding ABC transporter protein\tK11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB\/CyaB" }, { "name":"BN406_00856 atm1; Iron-sulfur clusters transporter atm1, mitochondrial\tK24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter" }, { "name":"BN406_01553 putative ABC transporter ATP-binding protein HI_1051\tK18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump" }, { "name":"BN406_01554 putative ABC transporter ATP-binding protein HI_1051\tK18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump" }, { "name":"BN406_02633 ABC transporter ATP-binding protein\tK06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial" }, { "name":"BN406_05603 exsA; MsbA-like saccharide exporting ABC transporter ATP-binding\/permease subunits\tK06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial" }, { "name":"BN406_06119 putative ABC transporter ATP-binding protein y4gM\tK06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial" }, { "name":"BN406_01767 prsD; Type I secretion system ATP-binding protein PrsD\tK12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease\/ATPase" }, { "name":"BN406_02803 type I secretion system ATPase\tK12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease\/ATPase" }, { "name":"BN406_05399 prsD; Type I secretion system ATP-binding protein PrsD\tK12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease\/ATPase" }, { "name":"BN406_05768 wgdA; ABC transporter ATP-binding protein\/permease\tK12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease\/ATPase" }, { "name":"BN406_06116 aprD; Alkaline protease secretion ATP-binding protein AprD\tK12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease\/ATPase" }, { "name":"BN406_01891 macB; Macrolide export ATP-binding\/permease protein MacB\tK05685 macB; macrolide transport system ATP-binding\/permease protein [EC:7.6.2.-]" }, { "name":"BN406_05607 ABC transporter domain-containing protein\tK02471 bacA; vitamin B12\/bleomycin\/antimicrobial peptide transport system ATP-binding\/permease protein" }, { "name":"BN406_03050 hfaC; Holdfast attachment protein C\tK15738 uup; ABC transport system ATP-binding\/permease protein" }, { "name":"BN406_05883 ABC transporter\tK02021 ABC.MR; putative ABC transport system ATP-binding protein" }, { "name":"BN406_03806 sbp; Sulfate-binding protein\tK02048 cysP; sulfate\/thiosulfate transport system substrate-binding protein" }, { "name":"BN406_05940 sbp; Sulfate-binding protein\tK23163 sbp; sulfate\/thiosulfate transport system substrate-binding protein" }, { "name":"BN406_05941 cysT; putative sulfate transport system permease protein cysT\tK02046 cysU; sulfate\/thiosulfate transport system permease protein" }, { "name":"BN406_05942 cysW; Sulfate transport system permease protein CysW\tK02047 cysW; sulfate\/thiosulfate transport system permease protein" }, { "name":"BN406_03807 cysA1; Sulfate\/thiosulfate import ATP-binding protein CysA 1\tK02045 cysA; sulfate\/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]" }, { "name":"BN406_05943 cysA2; Sulfate\/thiosulfate import ATP-binding protein CysA 2\tK02045 cysA; sulfate\/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]" }, { "name":"BN406_02783 modA; molybdate ABC transporter periplasmic molybdate-binding protein\tK02020 modA; molybdate transport system substrate-binding protein" }, { "name":"BN406_02784 modB; Molybdenum transport system permease protein modB\tK02018 modB; molybdate transport system permease protein" }, { "name":"BN406_02785 modC; Molybdenum import ATP-binding protein ModC\tK02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]" }, { "name":"BN406_04055 nrtA; Nitrate transport protein NrtA\tK15576 nrtA; nitrate\/nitrite transport system substrate-binding protein" }, { "name":"BN406_04054 nrtB; Nitrate transport permease protein nrtB\tK15577 nrtB; nitrate\/nitrite transport system permease protein" }, { "name":"BN406_04053 nasD; Nitrate transport protein NasD\tK15578 nrtC; nitrate\/nitrite transport system ATP-binding protein [EC:7.3.2.4]" }, { "name":"BN406_05699 taurine ABC transporter periplasmic binding protein\tK15551 tauA; taurine transport system substrate-binding protein" }, { "name":"BN406_05697 tauC; Taurine transport system permease protein tauC\tK15552 tauC; taurine transport system permease protein" }, { "name":"BN406_05698 tauB; Taurine import ATP-binding protein TauB\tK10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]" }, { "name":"BN406_00354 iron binding protein\tK02012 afuA; iron(III) transport system substrate-binding protein" }, { "name":"BN406_01875 afuA; IRON-binding periplasmic protein\tK02012 afuA; iron(III) transport system substrate-binding protein" }, { "name":"BN406_03908 extracellular solute-binding protein\tK02012 afuA; iron(III) transport system substrate-binding protein" }, { "name":"BN406_05268 iron ABC transporter substrate-binding protein precursor\tK02012 afuA; iron(III) transport system substrate-binding protein" }, { "name":"BN406_05684 iron uptake ABC transporter substrate-binding protein precursor\tK02012 afuA; iron(III) transport system substrate-binding protein" }, { "name":"BN406_06307 putative protein HI_0131\tK02012 afuA; iron(III) transport system substrate-binding protein" }, { "name":"BN406_06500 ABC transporter periplasmic solute-binding protein\tK02012 afuA; iron(III) transport system substrate-binding protein" }, { "name":"BN406_06501 ABC transporter periplasmic solute-binding protein\tK02012 afuA; iron(III) transport system substrate-binding protein" }, { "name":"BN406_00345 ABC transporter\tK02011 afuB; iron(III) transport system permease protein" }, { "name":"BN406_01874 ABC transporter\tK02011 afuB; iron(III) transport system permease protein" }, { "name":"BN406_03909 ABC transporter\tK02011 afuB; iron(III) transport system permease protein" }, { "name":"BN406_05682 iron uptake ABC transporter permease\tK02011 afuB; iron(III) transport system permease protein" }, { "name":"BN406_06308 ABC transporter\tK02011 afuB; iron(III) transport system permease protein" }, { "name":"BN406_06503 ABC transporter\tK02011 afuB; iron(III) transport system permease protein" }, { "name":"BN406_01259 Fe(3+)-transporting ATPase\tK02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]" }, { "name":"BN406_01873 potA1; Spermidine\/putrescine import ATP-binding protein PotA\tK02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]" }, { "name":"BN406_03910 ugpC3; sn-glycerol-3-phosphate import ATP-binding protein UgpC 3\tK02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]" }, { "name":"BN406_05683 fbpC2; Fe(3+) ions import ATP-binding protein FbpC 2\tK02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]" }, { "name":"BN406_06309 fbpC1; Fe(3+) ions import ATP-binding protein FbpC 1\tK02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]" }, { "name":"BN406_06502 ugpC3; sn-glycerol-3-phosphate import ATP-binding protein UgpC 3\tK02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]" }, { "name":"BN406_03053 thiB; Thiamine-binding periplasmic protein\tK02064 thiB; thiamine transport system substrate-binding protein" }, { "name":"BN406_03054 thiP; Thiamine transport system permease protein thiP\tK02063 thiP; thiamine transport system permease protein" }, { "name":"BN406_03055 thiQ; Thiamine import ATP-binding protein ThiQ\tK02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]" }, { "name":"BN406_00514 putrescine-binding periplasmic protein\tK11069 potD; spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_02068 periplasmic binding ABC transporter protein\tK11069 potD; spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_06381 family 1 extracellular solute-binding protein\tK11069 potD; spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_06734 unnamed protein product\tK11069 potD; spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_06738 ABC transporter substrate-binding protein\tK11069 potD; spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_06759 putative secreted protein\tK11069 potD; spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_02070 ABC transporter permease\tK11070 potC; spermidine\/putrescine transport system permease protein" }, { "name":"BN406_06383 spermidine\/putrescine ABC transporter permease\tK11070 potC; spermidine\/putrescine transport system permease protein" }, { "name":"BN406_06735 putative membrane protein\tK11070 potC; spermidine\/putrescine transport system permease protein" }, { "name":"BN406_06740 putative membrane protein\tK11070 potC; spermidine\/putrescine transport system permease protein" }, { "name":"BN406_06761 putative membrane protein\tK11070 potC; spermidine\/putrescine transport system permease protein" }, { "name":"BN406_02069 ABC transporter permease\tK11071 potB; spermidine\/putrescine transport system permease protein" }, { "name":"BN406_06382 spermidine\/putrescine ABC transporter permease\tK11071 potB; spermidine\/putrescine transport system permease protein" }, { "name":"BN406_02067 potA5; Spermidine\/putrescine import ATP-binding protein PotA\tK11072 potA; spermidine\/putrescine transport system ATP-binding protein [EC:7.6.2.11]" }, { "name":"BN406_06384 potA3; Spermidine\/putrescine import ATP-binding protein PotA\tK11072 potA; spermidine\/putrescine transport system ATP-binding protein [EC:7.6.2.11]" }, { "name":"BN406_06736 potA3; Spermidine\/putrescine import ATP-binding protein PotA\tK11072 potA; spermidine\/putrescine transport system ATP-binding protein [EC:7.6.2.11]" }, { "name":"BN406_06739 potA5; Spermidine\/putrescine import ATP-binding protein PotA\tK11072 potA; spermidine\/putrescine transport system ATP-binding protein [EC:7.6.2.11]" }, { "name":"BN406_06760 potA7; Spermidine\/putrescine import ATP-binding protein PotA\tK11072 potA; spermidine\/putrescine transport system ATP-binding protein [EC:7.6.2.11]" }, { "name":"BN406_00339 potF; Putrescine-binding periplasmic protein\tK11073 potF; putrescine transport system substrate-binding protein" }, { "name":"BN406_00342 potI; Putrescine transport system permease protein PotI\tK11074 potI; putrescine transport system permease protein" }, { "name":"BN406_00341 potH; Putrescine transport system permease protein PotH\tK11075 potH; putrescine transport system permease protein" }, { "name":"BN406_00340 potG; Putrescine transport ATP-binding protein PotG\tK11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]" }, { "name":"BN406_02041 periplasmic binding ABC transporter protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_02088 ydcS; Putative ABC transporter periplasmic-binding protein ydcS\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_02347 spermidine\/putrescine ABC transporter periplasmic protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_03631 extracellular solute-binding protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_04002 extracellular solute-binding protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_04024 Spermidine\/putrescine-binding periplasmic protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_04025 spermidine\/putrescine ABC transporter substrate-binding protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_04220 ABC transporter substrate-binding protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_04706 extracellular solute-binding protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_05879 ABC transporter substrate-binding protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_06289 family 1 extracellular solute-binding protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_06692 spermidine\/putrescine-binding periplasmic protein\tK02055 ABC.SP.S; putative spermidine\/putrescine transport system substrate-binding protein" }, { "name":"BN406_02043 permease\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_02091 ydcV; Inner membrane ABC transporter permease protein ydcV\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_02344 spermidine\/putrescine ABC transporter permease\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_03633 ABC transporter\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_04005 ABC transporter\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_04027 transporter, permease\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_04222 ABC transporter permease\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_04703 ABC transporter\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_05877 ABC transporter\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_06291 ABC transporter permease\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_06689 binding-protein-dependent transport systems inner membrane component\tK02053 ABC.SP.P; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_02042 ABC transporter\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_02090 ydcU; Inner membrane ABC transporter permease protein ydcU\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_02345 spermidine\/putrescine ABC transporter permease\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_03632 ABC transporter permease\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_04004 ABC transporter permease\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_04026 spermidine\/putrescine ABC transporter inner membrane protein\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_04221 ABC transporter permease\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_04704 ABC transporter integral membrane protein\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_05878 potB; spermidineputrescine ABC transporter permeasee protein\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_06290 ABC transporter\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_06690 putative Spermidine\/putrescine ABC transporter (permease protein)\tK02054 ABC.SP.P1; putative spermidine\/putrescine transport system permease protein" }, { "name":"BN406_02044 potA3; Spermidine\/putrescine import ATP-binding protein PotA\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_02089 ydcT; putative ABC transporter ATP-binding protein YdcT\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_02346 fbpC; Fe(3+) ions import ATP-binding protein FbpC\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_03630 potA1; Spermidine\/putrescine import ATP-binding protein PotA\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_04003 potA3; Spermidine\/putrescine import ATP-binding protein PotA\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_04032 potA5; Spermidine\/putrescine import ATP-binding protein PotA\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_04223 potA7; Spermidine\/putrescine import ATP-binding protein PotA\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_04705 potA9; Spermidine\/putrescine import ATP-binding protein PotA\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_05876 fbpC; Fe(3+) ions import ATP-binding protein FbpC\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_06292 potA1; Spermidine\/putrescine import ATP-binding protein PotA\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_06691 potA1; Spermidine\/putrescine import ATP-binding protein PotA\tK02052 ABC.SP.A; putative spermidine\/putrescine transport system ATP-binding protein" }, { "name":"BN406_00693 periplasmic binding transmembrane protein\tK02002 proX; glycine betaine\/proline transport system substrate-binding protein" }, { "name":"BN406_01695 glycine betaine ABC transporter periplasmic protein\tK02002 proX; glycine betaine\/proline transport system substrate-binding protein" }, { "name":"BN406_01885 amino acid-binding periplasmic protein\tK02002 proX; glycine betaine\/proline transport system substrate-binding protein" }, { "name":"BN406_02247 opuC; glycine betaine-binding ABC transporter protein\tK02002 proX; glycine betaine\/proline transport system substrate-binding protein" }, { "name":"BN406_02557 hisX; histidine-binding periplasmic signal peptide protein\tK02002 proX; glycine betaine\/proline transport system substrate-binding protein" }, { "name":"BN406_04687 glycine betaine ABC transporter periplasmic protein\tK02002 proX; glycine betaine\/proline transport system substrate-binding protein" }, { "name":"BN406_05654 amino acid uptake ABC transporter substrate-binding protein precursor\tK02002 proX; glycine betaine\/proline transport system substrate-binding protein" }, { "name":"BN406_06262 glycine-betaine-binding protein\tK02002 proX; glycine betaine\/proline transport system substrate-binding protein" }, { "name":"BN406_00694 proW; Glycine betaine\/L-proline transport system permease protein proW\tK02001 proW; glycine betaine\/proline transport system permease protein" }, { "name":"BN406_02248 opuAB1; Glycine betaine transport system permease protein OpuAB\tK02001 proW; glycine betaine\/proline transport system permease protein" }, { "name":"BN406_02558 opuAB3; Glycine betaine transport system permease protein OpuAB\tK02001 proW; glycine betaine\/proline transport system permease protein" }, { "name":"BN406_01696 opuAA1; Glycine betaine transport ATP-binding protein OpuAA\tK02000 proV; glycine betaine\/proline transport system ATP-binding protein [EC:7.6.2.9]" }, { "name":"BN406_02249 proV; Glycine betaine\/L-proline transport ATP-binding protein ProV\tK02000 proV; glycine betaine\/proline transport system ATP-binding protein [EC:7.6.2.9]" }, { "name":"BN406_02559 opuAA3; Glycine betaine transport ATP-binding protein OpuAA\tK02000 proV; glycine betaine\/proline transport system ATP-binding protein [EC:7.6.2.9]" }, { "name":"BN406_04535 ABC transporter\tK05845 opuC; osmoprotectant transport system substrate-binding protein" }, { "name":"BN406_05847 osmF; Putative osmoprotectant uptake system substrate-binding protein osmF\tK05845 opuC; osmoprotectant transport system substrate-binding protein" }, { "name":"BN406_04536 ABC transporter permease\tK05846 opuBD; osmoprotectant transport system permease protein" }, { "name":"BN406_04538 inner-membrane permease\tK05846 opuBD; osmoprotectant transport system permease protein" }, { "name":"BN406_05844 choline uptake ABC transporter permease\tK05846 opuBD; osmoprotectant transport system permease protein" }, { "name":"BN406_05846 ABC transporter\tK05846 opuBD; osmoprotectant transport system permease protein" }, { "name":"BN406_04537 opuCA; Carnitine transport ATP-binding protein OpuCA\tK05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]" }, { "name":"BN406_05845 yehX; Putative osmoprotectant uptake system ATP-binding protein YehX\tK05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]" }, { "name":"BN406_03204 ABC transporter solute-binding protein\tK05777 ynjB; putative thiamine transport system substrate-binding protein" }, { "name":"BN406_03203 ABC transporter permease\tK05778 ynjC; putative thiamine transport system permease protein" }, { "name":"BN406_03202 ABC transporter ATP-binding protein\tK05779 ynjD; putative thiamine transport system ATP-binding protein" }, { "name":"BN406_02309 hypothetical protein\tK02051 ABC.SN.S; NitT\/TauT family transport system substrate-binding protein" }, { "name":"BN406_02421 aliphatic sulfonates ABC transporter substrate-binding protein\tK02051 ABC.SN.S; NitT\/TauT family transport system substrate-binding protein" }, { "name":"BN406_06475 putative ABC transporter periplasmic solute-binding protein\tK02051 ABC.SN.S; NitT\/TauT family transport system substrate-binding protein" }, { "name":"BN406_02307 ABC transporter permease\tK02050 ABC.SN.P; NitT\/TauT family transport system permease protein" }, { "name":"BN406_02308 ABC transporter permease\tK02050 ABC.SN.P; NitT\/TauT family transport system permease protein" }, { "name":"BN406_02422 transport system permease ABC transporter protein\tK02050 ABC.SN.P; NitT\/TauT family transport system permease protein" }, { "name":"BN406_05223 ABC transporter\tK02050 ABC.SN.P; NitT\/TauT family transport system permease protein" }, { "name":"BN406_06474 ABC transporter protein\tK02050 ABC.SN.P; NitT\/TauT family transport system permease protein" }, { "name":"BN406_02305 putative ABC transporter ATP-binding protein MJ0412\tK02049 ABC.SN.A; NitT\/TauT family transport system ATP-binding protein" }, { "name":"BN406_02423 putative ABC transporter ATP-binding protein MJ0412\tK02049 ABC.SN.A; NitT\/TauT family transport system ATP-binding protein" }, { "name":"BN406_05225 putative ABC transporter ATP-binding protein MJ0412\tK02049 ABC.SN.A; NitT\/TauT family transport system ATP-binding protein" }, { "name":"BN406_06473 ABC transporter-like protein\tK02049 ABC.SN.A; NitT\/TauT family transport system ATP-binding protein" }, { "name":"BN406_02291 smoK1; ATP-binding transport protein SmoK\tK10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_03246 malK; Maltose\/maltodextrin import ATP-binding protein MalK\tK10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_03324 smoK3; ATP-binding transport protein SmoK\tK10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_05165 lacK3; Lactose transport ATP-binding protein LacK\tK10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_05405 malK1; Maltose\/maltodextrin import ATP-binding protein MalK\tK10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_05573 malK3; Maltose\/maltodextrin import ATP-binding protein MalK\tK10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_05620 lacK5; Lactose transport ATP-binding protein LacK\tK10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_05839 malK5; Maltose\/maltodextrin import ATP-binding protein MalK\tK10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_06344 aglK; Alpha-glucoside transport ATP-binding protein AglK\tK10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_01654 ugpC1; sn-glycerol-3-phosphate import ATP-binding protein UgpC\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_02060 ABC transporter ATP-binding protein\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_02061 ABC transporter ATP-binding protein\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_02362 putative ABC transporter ATP-binding protein y4oS\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_02917 ugpC3; sn-glycerol-3-phosphate import ATP-binding protein UgpC\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_03094 ugpC5; sn-glycerol-3-phosphate import ATP-binding protein UgpC\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_04174 putative ABC transporter ATP-binding protein y4oS\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_04463 putative ABC transporter ATP-binding protein y4oS\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_04464 yurJ; putative ABC transporter ATP-binding protein YurJ\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_05331 putative ABC transporter ATP-binding protein y4oS\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_05633 lacK7; Lactose transport ATP-binding protein LacK\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_05932 putative ABC transporter ATP-binding protein y4oS\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_05965 ugpC1; sn-glycerol-3-phosphate import ATP-binding protein UgpC\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_06431 putative ABC transporter ATP-binding protein y4oS\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_06644 putative ABC transporter ATP-binding protein y4oS\tK10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_02920 putative periplasmic binding ABC transporter protein\tK10117 msmE; raffinose\/stachyose\/melibiose transport system substrate-binding protein" }, { "name":"BN406_03328 periplasmic binding (signal peptide) ABC transporter protein\tK10117 msmE; raffinose\/stachyose\/melibiose transport system substrate-binding protein" }, { "name":"BN406_02919 transport system permease ABC transporter protein\tK10118 msmF; raffinose\/stachyose\/melibiose transport system permease protein" }, { "name":"BN406_03327 ABC transporter permease\tK10118 msmF; raffinose\/stachyose\/melibiose transport system permease protein" }, { "name":"BN406_02918 transport system permease ABC transporter protein\tK10119 msmG; raffinose\/stachyose\/melibiose transport system permease protein" }, { "name":"BN406_03326 ABC transporter permease\tK10119 msmG; raffinose\/stachyose\/melibiose transport system permease protein" }, { "name":"BN406_00311 aglE; Alpha-glucosides-binding periplasmic protein AglE\tK10232 aglE; alpha-glucoside transport system substrate-binding protein" }, { "name":"BN406_00312 aglF; Alpha-glucoside transport system permease protein AglF\tK10233 aglF; alpha-glucoside transport system permease protein" }, { "name":"BN406_00313 aglG; Alpha-glucoside transport system permease protein AglG\tK10234 aglG; alpha-glucoside transport system permease protein" }, { "name":"BN406_00315 aglK; Alpha-glucoside transport ATP-binding protein AglK\tK10235 aglK; alpha-glucoside transport system ATP-binding protein" }, { "name":"BN406_01657 periplasmic binding ABC transporter signal peptide protein\tK17315 gtsA; glucose\/mannose transport system substrate-binding protein" }, { "name":"BN406_03097 putative sugar-binding periplasmic protein\tK17315 gtsA; glucose\/mannose transport system substrate-binding protein" }, { "name":"BN406_01656 transport system permease ABC transporter protein\tK17316 gtsB; glucose\/mannose transport system permease protein" }, { "name":"BN406_03096 transport system permease ABC transporter protein\tK17316 gtsB; glucose\/mannose transport system permease protein" }, { "name":"BN406_01655 ABC transporter\tK17317 gtsC; glucose\/mannose transport system permease protein" }, { "name":"BN406_03095 transport system permease ABC transporter protein\tK17317 gtsC; glucose\/mannose transport system permease protein" }, { "name":"BN406_05404 putative ABC transporter-binding protein DR_1438\tK10236 thuE; trehalose\/maltose transport system substrate-binding protein" }, { "name":"BN406_06347 putative ABC transporter-binding protein DR_1438\tK10236 thuE; trehalose\/maltose transport system substrate-binding protein" }, { "name":"BN406_05406 sugar uptake ABC transporter permease\tK10237 thuF; trehalose\/maltose transport system permease protein" }, { "name":"BN406_06346 ABC transporter\tK10237 thuF; trehalose\/maltose transport system permease protein" }, { "name":"BN406_05407 sugar uptake ABC transporter permease\tK10238 thuG; trehalose\/maltose transport system permease protein" }, { "name":"BN406_06345 thuG; trehalosemaltose transporter permease\tK10238 thuG; trehalose\/maltose transport system permease protein" }, { "name":"BN406_06175 araF; L-arabinose-binding periplasmic protein\tK10537 araF; L-arabinose transport system substrate-binding protein" }, { "name":"BN406_06177 araH; L-arabinose transport system permease protein AraH\tK10538 araH; L-arabinose transport system permease protein" }, { "name":"BN406_06176 araG3; Arabinose import ATP-binding protein AraG\tK10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]" }, { "name":"BN406_05135 lacE; Lactose-binding protein\tK10188 lacE; lactose\/L-arabinose transport system substrate-binding protein" }, { "name":"BN406_05134 lacF; Lactose transport system permease protein lacF\tK10189 lacF; lactose\/L-arabinose transport system permease protein" }, { "name":"BN406_05133 lacG; Lactose transport system permease protein lacG\tK10190 lacG; lactose\/L-arabinose transport system permease protein" }, { "name":"BN406_05131 lacK1; Lactose transport ATP-binding protein LacK\tK10191 lacK; lactose\/L-arabinose transport system ATP-binding protein" }, { "name":"BN406_05141 agpA; Periplasmic alpha-galactoside-binding protein\tK25096 agpA; alpha-galactoside transport system substrate-binding protein" }, { "name":"BN406_05142 ABC transporter\tK25097 agpB; alpha-galactoside transport system permease protein" }, { "name":"BN406_05143 ABC transporter permease\tK25098 agpC; alpha-galactoside transport system permease protein" }, { "name":"BN406_05144 yejF1; putative ABC transporter ATP-binding protein YejF\tK25099 agpD; alpha-galactoside transport system ATP-binding protein" }, { "name":"BN406_05477 xylF; D-xylose-binding periplasmic protein\tK10543 xylF; D-xylose transport system substrate-binding protein" }, { "name":"BN406_05476 ABC transporter\tK10544 xylH; D-xylose transport system permease protein" }, { "name":"BN406_05475 rbsA1; Ribose import ATP-binding protein RbsA 1\tK10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]" }, { "name":"BN406_05485 chvE; Multiple sugar-binding periplasmic receptor ChvE\tK10546 chvE; putative multiple sugar transport system substrate-binding protein" }, { "name":"BN406_05487 gguB; sugar uptake ABC transporter permease\tK10547 gguB; putative multiple sugar transport system permease protein" }, { "name":"BN406_05486 araG1; L-arabinose transport ATP-binding protein AraG\tK10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_00124 periplasmic binding ABC transporter protein\tK10552 frcB; fructose transport system substrate-binding protein" }, { "name":"BN406_00125 ABC transporter permease\tK10553 frcC; fructose transport system permease protein" }, { "name":"BN406_00126 ABC transporter ATP-binding protein\tK10554 frcA; fructose transport system ATP-binding protein" }, { "name":"BN406_00246 periplasmic binding ABC transporter protein\tK10559 rhaS; rhamnose transport system substrate-binding protein" }, { "name":"BN406_00248 rhaP; Rhamnose transport system permease protein\tK10560 rhaP; rhamnose transport system permease protein" }, { "name":"BN406_00249 ABC transporter\tK10561 rhaQ; rhamnose transport system permease protein" }, { "name":"BN406_00247 rbsA1; Ribose import ATP-binding protein RbsA 1\tK10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_00370 periplasmic binding protein\/LacI transcriptional regulator\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_02381 periplasmic binding ABC transporter protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_02393 putative periplasmic binding protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_02414 periplasmic binding ABC transporter protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_02996 periplasmic binding ABC transporter protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_03155 periplasmic binding protein\/LacI transcriptional regulator\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_04515 ABC transporter substrate-binding protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_04872 ABC transporter substrate-binding protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_04931 periplasmic binding protein\/LacI transcriptional regulator\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_04972 putative ABC transporter component\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_05115 sugar ABC transporter substrate-binding protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_05271 sugar uptake ABC transporter substrate-binding protein precursor\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_05321 sugar uptake ABC transporter substrate-binding protein precursor\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_05523 ABC transporter substrate-binding protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_05612 putative sugar uptake ABC transporter periplasmic solute-binding protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_05709 sugar uptake ABC transporter substrate-binding protein precursor\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_06179 putative ABC transporter periplasmic sugar-binding protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_06660 putative secreted protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_06674 putative secreted protein\tK10439 rbsB; ribose transport system substrate-binding protein" }, { "name":"BN406_00371 monosaccharide-transporting ATPase\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_02379 ABC transporter permease\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_02391 rbsC; Ribose transport system permease protein rbsC\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_02412 ABC transporter\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_02997 transport system permease ABC transporter protein\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_03157 sugar ABC transporter permease\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_04038 inner-membrane translocator\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_04039 inner-membrane translocator\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_04512 ABC transporter permease\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_04514 ABC transporter permease\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_04869 ABC transporter permease\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_04870 ABC transporter permease\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_04932 ABC transporter permease\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_04974 ABC transporter\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_04975 ABC transporter\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_05117 sugar ABC transporter permease ABC transporter\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_05118 sugar ABC transporter permease ABC transporter\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_05272 sugar uptake ABC transporter permease\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_05525 ABC transporter permease\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_05614 sugar uptake ABC transporter permease\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_05711 rbsC; Ribose transport system permease protein rbsC\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_06181 probabable sugar ABC transporter\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_06662 putative membrane protein\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_06673 rbsC; Ribose transport system permease protein rbsC\tK10440 rbsC; ribose transport system permease protein" }, { "name":"BN406_02392 rbsA1; Ribose import ATP-binding protein RbsA 1\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_02413 Putative ribose\/galactose\/methyl galactoside import ATP-binding protein 1\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_03156 rbsA2; Ribose import ATP-binding protein RbsA 2\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_04037 rbsA1; Ribose import ATP-binding protein RbsA 1\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_04513 ABC transporter ATP-binding protein\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_04871 Putative ribose\/galactose\/methyl galactoside import ATP-binding protein\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_04933 rbsA1; Ribose import ATP-binding protein RbsA 1\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_04973 monosaccharide-transporting ATPase\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_05116 Putative ribose\/galactose\/methyl galactoside import ATP-binding protein 2\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_05273 rbsA3; Ribose import ATP-binding protein RbsA 3\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_05319 Putative ribose\/galactose\/methyl galactoside import ATP-binding protein 2\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_05524 rbsA3; Ribose import ATP-binding protein RbsA 3\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_05710 rbsA5; Ribose import ATP-binding protein RbsA\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_06180 rbsA2; Ribose import ATP-binding protein RbsA 2\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_06661 rbsA; Ribose import ATP-binding protein RbsA\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_06675 Putative ribose\/galactose\/methyl galactoside import ATP-binding protein 1\tK10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]" }, { "name":"BN406_05638 ytfQ; ABC transporter periplasmic-binding protein ytfQ\tK23508 ytfQ; galactofuranose transport system substrate-binding protein" }, { "name":"BN406_05740 periplasmic binding protein\/LacI transcriptional regulator\tK23508 ytfQ; galactofuranose transport system substrate-binding protein" }, { "name":"BN406_05635 yjfF; Inner membrane ABC transporter permease protein yjfF\tK23509 ytfT; galactofuranose transport system permease protein" }, { "name":"BN406_05636 ytfT; Inner membrane ABC transporter permease protein ytfT\tK23509 ytfT; galactofuranose transport system permease protein" }, { "name":"BN406_05742 sugar uptake ABC transporter permease\tK23509 ytfT; galactofuranose transport system permease protein" }, { "name":"BN406_05743 ABC transporter\tK23509 ytfT; galactofuranose transport system permease protein" }, { "name":"BN406_05637 ytfR1; putative ABC transporter ATP-binding protein YtfR\tK10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]" }, { "name":"BN406_05741 ytfR3; putative ABC transporter ATP-binding protein YtfR\tK10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]" }, { "name":"BN406_06323 periplasmic binding protein\/LacI transcriptional regulator\tK17202 eryG; erythritol transport system substrate-binding protein" }, { "name":"BN406_06320 sugar ABC transporter permease\tK17203 eryF; erythritol transport system permease protein" }, { "name":"BN406_06321 rbsA7; Ribose import ATP-binding protein RbsA\tK17204 eryE; erythritol transport system ATP-binding protein" }, { "name":"BN406_05280 mocB1; Putative rhizopine-binding protein\tK17213 K17213; inositol transport system substrate-binding protein" }, { "name":"BN406_06585 mocB3; Putative rhizopine-binding protein\tK17213 K17213; inositol transport system substrate-binding protein" }, { "name":"BN406_06770 mocB; Putative rhizopine-binding protein\tK17213 K17213; inositol transport system substrate-binding protein" }, { "name":"BN406_05278 sugar uptake ABC transporter permease\tK17214 K17214; inositol transport system permease protein" }, { "name":"BN406_06771 sugar ABC transporter permease\tK17214 K17214; inositol transport system permease protein" }, { "name":"BN406_05279 Putative ribose\/galactose\/methyl galactoside import ATP-binding protein 2\tK17215 K17215; inositol transport system ATP-binding protein" }, { "name":"BN406_06790 Putative ribose\/galactose\/methyl galactoside import ATP-binding protein 2\tK17215 K17215; inositol transport system ATP-binding protein" }, { "name":"BN406_02877 periplasmic binding ABC transporter protein\tK17321 glpV; glycerol transport system substrate-binding protein" }, { "name":"BN406_02874 transport system permease ABC transporter protein\tK17322 glpP; glycerol transport system permease protein" }, { "name":"BN406_02875 transport system permease ABC transporter protein\tK17323 glpQ; glycerol transport system permease protein" }, { "name":"BN406_02872 ABC transporter ATP-binding protein\tK17324 glpS; glycerol transport system ATP-binding protein" }, { "name":"BN406_02873 ABC transporter ATP-binding protein\tK17325 glpT; glycerol transport system ATP-binding protein" }, { "name":"BN406_06257 ugpB; sn-glycerol-3-phosphate-binding periplasmic protein ugpB\tK05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein" }, { "name":"BN406_06256 ugpA; sn-glycerol-3-phosphate transport system permease protein ugpA\tK05814 ugpA; sn-glycerol 3-phosphate transport system permease protein" }, { "name":"BN406_06255 ugpE; sn-glycerol-3-phosphate transport system permease protein ugpE\tK05815 ugpE; sn-glycerol 3-phosphate transport system permease protein" }, { "name":"BN406_06254 ugpC5; sn-glycerol-3-phosphate import ATP-binding protein UgpC\tK05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]" }, { "name":"BN406_02294 smoE; sorbitol-binding periplasmic protein\tK10227 smoE; polyol transport system substrate-binding protein" }, { "name":"BN406_02293 ABC transporter\tK10228 smoF; polyol transport system permease protein" }, { "name":"BN406_02292 smoG; sorbitol\/mannitol transport inner membrane protein\tK10229 smoG; polyol transport system permease protein" }, { "name":"BN406_03251 periplasmic binding ABC transporter protein\tK25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein" }, { "name":"BN406_06157 extracellular solute-binding protein\tK25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein" }, { "name":"BN406_03250 yesP; putative ABC transporter permease protein yesP\tK25677 yesP; pectin-derived oligosaccharide transport system permease protein" }, { "name":"BN406_03249 yesQ; putative ABC transporter permease protein yesQ\tK25678 yesQ; pectin-derived oligosaccharide transport system permease protein" }, { "name":"BN406_01419 Purine-binding protein BAB2_0673\tK07335 bmpA; basic membrane protein A and related proteins" }, { "name":"BN406_03339 lipoprotein precursor\tK07335 bmpA; basic membrane protein A and related proteins" }, { "name":"BN406_03521 hypothetical protein\tK07335 bmpA; basic membrane protein A and related proteins" }, { "name":"BN406_03644 basic membrane lipoprotein\tK07335 bmpA; basic membrane protein A and related proteins" }, { "name":"BN406_04557 hypothetical protein\tK07335 bmpA; basic membrane protein A and related proteins" }, { "name":"BN406_06531 basic membrane lipoprotein\tK07335 bmpA; basic membrane protein A and related proteins" }, { "name":"BN406_01421 transport system permease ABC transporter protein\tK23535 nupB; general nucleoside transport system permease protein" }, { "name":"BN406_03260 transport system permease ABC transporter protein\tK23535 nupB; general nucleoside transport system permease protein" }, { "name":"BN406_03518 ABC transporter permease\tK23535 nupB; general nucleoside transport system permease protein" }, { "name":"BN406_03646 putative ABC transporter, permease\tK23535 nupB; general nucleoside transport system permease protein" }, { "name":"BN406_04559 ABC transporter integral membrane protein\tK23535 nupB; general nucleoside transport system permease protein" }, { "name":"BN406_06532 ABC transporter\tK23535 nupB; general nucleoside transport system permease protein" }, { "name":"BN406_01420 transport system permease ABC transporter protein\tK23536 nupC; general nucleoside transport system permease protein" }, { "name":"BN406_03261 transport system permease ABC transporter protein\tK23536 nupC; general nucleoside transport system permease protein" }, { "name":"BN406_03517 ABC transporter integral membrane protein\tK23536 nupC; general nucleoside transport system permease protein" }, { "name":"BN406_03647 inner-membrane translocator\tK23536 nupC; general nucleoside transport system permease protein" }, { "name":"BN406_04560 ABC transporter permease\tK23536 nupC; general nucleoside transport system permease protein" }, { "name":"BN406_06533 sugar ABC transporter permease\tK23536 nupC; general nucleoside transport system permease protein" }, { "name":"BN406_01422 ABC transporter ATP-binding protein\tK23537 nupA; general nucleoside transport system ATP-binding protein" }, { "name":"BN406_03259 yufO; putative ABC transporter ATP-binding protein YufO\tK23537 nupA; general nucleoside transport system ATP-binding protein" }, { "name":"BN406_03519 yufO; putative ABC transporter ATP-binding protein YufO\tK23537 nupA; general nucleoside transport system ATP-binding protein" }, { "name":"BN406_03645 monosaccharide-transporting ATPase\tK23537 nupA; general nucleoside transport system ATP-binding protein" }, { "name":"BN406_04558 monosaccharide-transporting ATPase\tK23537 nupA; general nucleoside transport system ATP-binding protein" }, { "name":"BN406_06534 yufO; putative ABC transporter ATP-binding protein YufO\tK23537 nupA; general nucleoside transport system ATP-binding protein" }, { "name":"BN406_06014 lsrB; Autoinducer 2-binding protein lsrB\tK10555 lsrB; AI-2 transport system substrate-binding protein" }, { "name":"BN406_06012 lsrC; Autoinducer 2 import system permease protein lsrC\tK10556 lsrC; AI-2 transport system permease protein" }, { "name":"BN406_06013 lsrD; Autoinducer 2 import system permease protein lsrD\tK10557 lsrD; AI-2 transport system permease protein" }, { "name":"BN406_06011 lsrA; Autoinducer 2 import ATP-binding protein LsrA\tK10558 lsrA; AI-2 transport system ATP-binding protein" }, { "name":"BN406_01564 hypothetical protein\tK02067 mlaD; phospholipid\/cholesterol\/gamma-HCH transport system substrate-binding protein" }, { "name":"BN406_01566 hypothetical protein\tK02066 mlaE; phospholipid\/cholesterol\/gamma-HCH transport system permease protein" }, { "name":"BN406_01565 ABC transporter ATP-binding protein\tK02065 mlaF; phospholipid\/cholesterol\/gamma-HCH transport system ATP-binding protein" }, { "name":"BN406_01563 hypothetical protein\tK18480 linN; cholesterol transport system auxiliary component" }, { "name":"BN406_02064 periplasmic binding ABC transporter protein\tK02027 ABC.MS.S; multiple sugar transport system substrate-binding protein" }, { "name":"BN406_02359 sugar-binding periplasmic ABC transporter protein\tK02027 ABC.MS.S; multiple sugar transport system substrate-binding protein" }, { "name":"BN406_04171 extracellular solute-binding protein\tK02027 ABC.MS.S; multiple sugar transport system substrate-binding protein" }, { "name":"BN406_04459 ABC transporter substrate-binding protein\tK02027 ABC.MS.S; multiple sugar transport system substrate-binding protein" }, { "name":"BN406_04479 family 1 extracellular solute-binding protein\tK02027 ABC.MS.S; multiple sugar transport system substrate-binding protein" }, { "name":"BN406_05160 sugar uptake ABC transporter substrate-binding protein precursor\tK02027 ABC.MS.S; multiple sugar transport system substrate-binding protein" }, { "name":"BN406_05332 sugar uptake ABC transporter substrate-binding protein precursor\tK02027 ABC.MS.S; multiple sugar transport system substrate-binding protein" }, { "name":"BN406_05574 putative sugar uptake ABC transporter periplasmic solute-binding protein\tK02027 ABC.MS.S; multiple sugar transport system substrate-binding protein" }, { "name":"BN406_05621 family 1 extracellular solute-binding protein\tK02027 ABC.MS.S; multiple sugar transport system substrate-binding protein" }, { "name":"BN406_05630 sugar uptake ABC transporter substrate-binding protein precursor\tK02027 ABC.MS.S; multiple sugar transport system substrate-binding protein" }, { "name":"BN406_05840 family 1 extracellular solute-binding protein\tK02027 ABC.MS.S; multiple sugar transport system substrate-binding protein" }, { "name":"BN406_05927 family 1 extracellular solute-binding protein\tK02027 ABC.MS.S; multiple sugar transport system substrate-binding protein" }, { "name":"BN406_05968 extracellular solute-binding protein\tK02027 ABC.MS.S; multiple sugar transport system substrate-binding protein" }, { "name":"BN406_05980 hypothetical protein\tK02027 ABC.MS.S; multiple sugar transport system substrate-binding protein" }, { "name":"BN406_06435 extracellular solute-binding protein\tK02027 ABC.MS.S; multiple sugar transport system substrate-binding protein" }, { "name":"BN406_06647 putative secreted protein\tK02027 ABC.MS.S; multiple sugar transport system substrate-binding protein" }, { "name":"BN406_02063 ABC transporter permease\tK02025 ABC.MS.P; multiple sugar transport system permease protein" }, { "name":"BN406_02360 sugar transport system permease ABC transporter protein\tK02025 ABC.MS.P; multiple sugar transport system permease protein" }, { "name":"BN406_04172 ABC transporter permease\tK02025 ABC.MS.P; multiple sugar transport system permease protein" }, { "name":"BN406_04460 ABC transporter permease\tK02025 ABC.MS.P; multiple sugar transport system permease protein" }, { "name":"BN406_04478 ABC transporter permease\tK02025 ABC.MS.P; multiple sugar transport system permease protein" }, { "name":"BN406_05161 sugar uptake ABC transporter permease\tK02025 ABC.MS.P; multiple sugar transport system permease protein" }, { "name":"BN406_05333 sugar uptake ABC transporter permease\tK02025 ABC.MS.P; multiple sugar transport system permease protein" }, { "name":"BN406_05575 sugar uptake ABC transporter permease\tK02025 ABC.MS.P; multiple sugar transport system permease protein" }, { "name":"BN406_05622 sugar uptake ABC transporter permease\tK02025 ABC.MS.P; multiple sugar transport system permease protein" }, { "name":"BN406_05631 sugar uptake ABC transporter permease\tK02025 ABC.MS.P; multiple sugar transport system permease protein" }, { "name":"BN406_05842 sugar uptake ABC transporter permease\tK02025 ABC.MS.P; multiple sugar transport system permease protein" }, { "name":"BN406_05928 ABC transporter\tK02025 ABC.MS.P; multiple sugar transport system permease protein" }, { "name":"BN406_05967 ABC transporter\tK02025 ABC.MS.P; multiple sugar transport system permease protein" }, { "name":"BN406_06434 suagr ABC transporter permease\tK02025 ABC.MS.P; multiple sugar transport system permease protein" }, { "name":"BN406_06646 putative membrane protein\tK02025 ABC.MS.P; multiple sugar transport system permease protein" }, { "name":"BN406_02062 ABC transporter permease\tK02026 ABC.MS.P1; multiple sugar transport system permease protein" }, { "name":"BN406_02361 sugar transport system permease ABC transporter protein\tK02026 ABC.MS.P1; multiple sugar transport system permease protein" }, { "name":"BN406_04173 ABC transporter permease\tK02026 ABC.MS.P1; multiple sugar transport system permease protein" }, { "name":"BN406_04461 ABC transporter integral membrane protein\tK02026 ABC.MS.P1; multiple sugar transport system permease protein" }, { "name":"BN406_04477 ABC transporter integral membrane protein\tK02026 ABC.MS.P1; multiple sugar transport system permease protein" }, { "name":"BN406_05163 putative sugar uptake ABC transporter permease\tK02026 ABC.MS.P1; multiple sugar transport system permease protein" }, { "name":"BN406_05334 sugar uptake ABC transporter permease\tK02026 ABC.MS.P1; multiple sugar transport system permease protein" }, { "name":"BN406_05576 sugar uptake ABC transporter permease\tK02026 ABC.MS.P1; multiple sugar transport system permease protein" }, { "name":"BN406_05623 sugar uptake ABC transporter permease\tK02026 ABC.MS.P1; multiple sugar transport system permease protein" }, { "name":"BN406_05632 sugar uptake ABC transporter permease\tK02026 ABC.MS.P1; multiple sugar transport system permease protein" }, { "name":"BN406_05841 sugar uptake ABC transporter permease\tK02026 ABC.MS.P1; multiple sugar transport system permease protein" }, { "name":"BN406_05929 sugar ABC transporter permease\tK02026 ABC.MS.P1; multiple sugar transport system permease protein" }, { "name":"BN406_05966 sugar ABC transporter permease\tK02026 ABC.MS.P1; multiple sugar transport system permease protein" }, { "name":"BN406_06433 ABC transporter\tK02026 ABC.MS.P1; multiple sugar transport system permease protein" }, { "name":"BN406_06645 putative membrane protein\tK02026 ABC.MS.P1; multiple sugar transport system permease protein" }, { "name":"BN406_04961 periplasmic binding protein\/LacI transcriptional regulator\tK02058 ABC.SS.S; simple sugar transport system substrate-binding protein" }, { "name":"BN406_05052 putative ABC transporter periplasmic solute-binding protein\tK02058 ABC.SS.S; simple sugar transport system substrate-binding protein" }, { "name":"BN406_05175 sugar uptake ABC transporter substrate-binding protein precursor\tK02058 ABC.SS.S; simple sugar transport system substrate-binding protein" }, { "name":"BN406_06201 sugar ABC transporter substrate-binding protein\tK02058 ABC.SS.S; simple sugar transport system substrate-binding protein" }, { "name":"BN406_06356 periplasmic binding protein\/LacI transcriptional regulator\tK02058 ABC.SS.S; simple sugar transport system substrate-binding protein" }, { "name":"BN406_04962 ABC transporter\tK02057 ABC.SS.P; simple sugar transport system permease protein" }, { "name":"BN406_05051 ABC transporter integral membrane protein\tK02057 ABC.SS.P; simple sugar transport system permease protein" }, { "name":"BN406_05174 ABC transporter\tK02057 ABC.SS.P; simple sugar transport system permease protein" }, { "name":"BN406_05320 ABC transporter\tK02057 ABC.SS.P; simple sugar transport system permease protein" }, { "name":"BN406_06198 ABC transporter\tK02057 ABC.SS.P; simple sugar transport system permease protein" }, { "name":"BN406_06199 probabable sugar ABC transporter\tK02057 ABC.SS.P; simple sugar transport system permease protein" }, { "name":"BN406_06354 sugar ABC transporter permease\tK02057 ABC.SS.P; simple sugar transport system permease protein" }, { "name":"BN406_06357 ABC transporter\tK02057 ABC.SS.P; simple sugar transport system permease protein" }, { "name":"BN406_00372 ABC transporter-like protein\tK02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_02380 ABC transporter ATP-binding protein\tK02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_02998 monosaccharide-transporting ATPase\tK02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_04963 monosaccharide-transporting ATPase\tK02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_05050 monosaccharide-transporting ATPase\tK02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_05173 monosaccharide-transporting ATPase\tK02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_05613 rbsA2; Ribose import ATP-binding protein RbsA 2\tK02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_06200 rbsA2; Ribose import ATP-binding protein RbsA 2\tK02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_06355 monosaccharide-transporting ATPase\tK02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]" }, { "name":"BN406_00143 phosphate-binding periplasmic protein\tK02040 pstS; phosphate transport system substrate-binding protein" }, { "name":"BN406_00144 phosphate ABC transporter permease\tK02037 pstC; phosphate transport system permease protein" }, { "name":"BN406_00145 pstA; phosphate ABC transporter permease\tK02038 pstA; phosphate transport system permease protein" }, { "name":"BN406_00146 pstB; Phosphate import ATP-binding protein PstB\tK02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]" }, { "name":"BN406_05816 phoD; phosphate uptake ABC transporter substrate-binding protein precursor\tK02044 phnD; phosphonate transport system substrate-binding protein" }, { "name":"BN406_05817 phoE; phosphate uptake ABC transporter permease\tK02042 phnE; phosphonate transport system permease protein" }, { "name":"BN406_05818 phoT; phosphate uptake ABC transporter permease\tK02042 phnE; phosphonate transport system permease protein" }, { "name":"BN406_05815 phnC; Phosphonates import ATP-binding protein PhnC\tK02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]" }, { "name":"BN406_04014 glutamate\/aspartate periplasmic-binding protein 1\tK10001 gltI; glutamate\/aspartate transport system substrate-binding protein" }, { "name":"BN406_04016 glutamate\/aspartate ABC transporter, permease protein\tK10002 gltK; glutamate\/aspartate transport system permease protein" }, { "name":"BN406_04015 amino ABC transporter permease, 3-TM region, His\/Glu\/Gln\/Arg\/opine family domain-containing protein 1\tK10003 gltJ; glutamate\/aspartate transport system permease protein" }, { "name":"BN406_04017 gltL; Glutamate\/aspartate transport ATP-binding protein GltL\tK10004 gltL; glutamate\/aspartate transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_03687 occT; Octopine-binding periplasmic protein\tK10018 occT; octopine\/nopaline transport system substrate-binding protein" }, { "name":"BN406_03685 occM1; Octopine transport system permease protein occM\tK10019 occM; octopine\/nopaline transport system permease protein" }, { "name":"BN406_03684 occQ; Octopine transport system permease protein occQ\tK10020 occQ; octopine\/nopaline transport system permease protein" }, { "name":"BN406_03686 occP; Octopine permease ATP-binding protein P\tK10021 occP; octopine\/nopaline transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_01210 aapJ1; General L-amino acid-binding periplasmic protein AapJ\tK09969 aapJ; general L-amino acid transport system substrate-binding protein" }, { "name":"BN406_02553 aapJ3; General L-amino acid-binding periplasmic protein AapJ\tK09969 aapJ; general L-amino acid transport system substrate-binding protein" }, { "name":"BN406_01209 aapQ; General L-amino acid transport system permease protein AapQ\tK09970 aapQ; general L-amino acid transport system permease protein" }, { "name":"BN406_01208 aapM; General L-amino acid transport system permease protein AapM\tK09971 aapM; general L-amino acid transport system permease protein" }, { "name":"BN406_01207 aapP1; General L-amino acid transport ATP-binding protein AapP\tK09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_02814 aapP3; General L-amino acid transport ATP-binding protein AapP\tK09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_03074 putative amino-acid ABC transporter-binding protein HI_1080\tK02424 tcyA; L-cystine transport system substrate-binding protein" }, { "name":"BN406_03075 putative amino-acid ABC transporter permease protein HI_0179\tK10009 tcyB; L-cystine transport system permease protein" }, { "name":"BN406_03076 tcyC; L-cystine import ATP-binding protein TcyC\tK10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_03893 ABC transporter substrate-binding protein\tK10022 aotJ; arginine\/ornithine transport system substrate-binding protein" }, { "name":"BN406_03891 occM3; Octopine transport system permease protein occM\tK10023 aotM; arginine\/ornithine transport system permease protein" }, { "name":"BN406_03892 ABC transporter permease\tK10024 aotQ; arginine\/ornithine transport system permease protein" }, { "name":"BN406_03890 aapP1; General L-amino acid transport ATP-binding protein AapP\tK10025 aotP; arginine\/ornithine transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_06403 ABC transporter periplasmic protein\tK23061 lhpP; hydroxyproline transporter system substrate-binding protein" }, { "name":"BN406_06402 amino acid ABC transporter permease\tK23062 lhpM; hydroxyproline transport system permease protein" }, { "name":"BN406_06401 amino acid ABC transporter permease\tK23063 lhpN; hydroxyproline transport system permease protein" }, { "name":"BN406_06400 glnQ; Glutamine transport ATP-binding protein GlnQ\tK23064 lhpO; hydroxyproline transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_00579 Leu\/Ile\/Val-binding protein homolog 3\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_01495 amino acid-binding periplasmic protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_02329 Leu\/Ile\/Val-binding protein homolog 1\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_02433 branched chain amino acid ABC transporter periplasmic protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_02829 periplasmic binding ABC transporter protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_03875 Leu\/Ile\/Val-binding protein homolog 8\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_04051 Leu\/Ile\/Val-binding protein homolog 1\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_05226 Leu\/Ile\/Val-binding protein homolog 6\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_06700 putative secreted protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_06785 branched-chain amino acid ABC transporter substrate-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"BN406_00902 ABC transporter\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"BN406_02334 livH; High-affinity branched-chain amino acid transport system permease protein livH\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"BN406_02436 high-affinity branched-chain amino acid transport permease ABC transporter protein\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"BN406_02832 ABC transporter permease\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"BN406_03876 ABC transporter permease\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"BN406_05227 ABC transporter\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"BN406_06702 putative membrane protein\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"BN406_02333 livM; high-affinity branched-chain amino acid transport permease ABC transporter protein\tK01998 livM; branched-chain amino acid transport system permease protein" }, { "name":"BN406_02437 branched chain amino acid ABC transporter permease\tK01998 livM; branched-chain amino acid transport system permease protein" }, { "name":"BN406_02833 ABC transporter\tK01998 livM; branched-chain amino acid transport system permease protein" }, { "name":"BN406_03877 livG; probabable high-affinity branched-chain amino acid transport atp-binding abc transporter protein\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_05228 ABC transporter\tK01998 livM; branched-chain amino acid transport system permease protein" }, { "name":"BN406_06703 putative branched-chain amino acid ABC transporter, permease protein\tK01998 livM; branched-chain amino acid transport system permease protein" }, { "name":"BN406_02332 braF; High-affinity branched-chain amino acid transport ATP-binding protein BraF\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_02434 high-affinity branched-chain amino acid transport ATP-binding ABC transporter protein\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_02830 ABC transporter ATP-binding protein\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_05229 monosaccharide-transporting ATPase\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_06701 putative branched-chain amino acid ABC transporter, ATP-binding protein\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_02331 livF1; High-affinity branched-chain amino acid transport ATP-binding protein LivF\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_02435 livF3; High-affinity branched-chain amino acid transport ATP-binding protein LivF\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_02831 ABC transporter ATP-binding protein\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_03878 livF; High-affinity branched-chain amino acid transport ATP-binding protein LivF\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_05230 Fe(3+)-transporting ATPase\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_06698 hypothetical protein\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"BN406_02744 outer membrane lipoprotein transmembrane\tK02073 metQ; D-methionine transport system substrate-binding protein" }, { "name":"BN406_02745 metI; putative D-methionine transport system permease protein metI\tK02072 metI; D-methionine transport system permease protein" }, { "name":"BN406_02746 metN; Methionine import ATP-binding protein MetN\tK02071 metN; D-methionine transport system ATP-binding protein" }, { "name":"BN406_05191 branched-chain amino acid ABC transporter substrate-binding protein precursor\tK11959 urtA; urea transport system substrate-binding protein" }, { "name":"BN406_05192 ABC transporter permease\tK11960 urtB; urea transport system permease protein" }, { "name":"BN406_05193 urea ABC transporter permease UrtC\tK11961 urtC; urea transport system permease protein" }, { "name":"BN406_05194 branched-chain amino acid ABC transporter ATP-binding protein\tK11962 urtD; urea transport system ATP-binding protein" }, { "name":"BN406_05195 ABC transporter ATP-binding protein\tK11963 urtE; urea transport system ATP-binding protein" }, { "name":"BN406_03014 hypothetical protein\tK01989 K01989; putative tryptophan\/tyrosine transport system substrate-binding protein" }, { "name":"BN406_03013 transport system permease ABC transporter protein\tK05832 K05832; putative tryptophan\/tyrosine transport system permease protein" }, { "name":"BN406_03012 ABC transporter ATP-binding protein\tK05833 K05833; putative tryptophan\/tyrosine transport system ATP-binding protein" }, { "name":"BN406_00157 amino acid-binding periplasmic protein\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"BN406_00198 ABC transporter periplasmic protein\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"BN406_01603 amino-acid binding periplasmic protein\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"BN406_02818 ABC transporter substrate-binding protein\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"BN406_03048 amino acid-binding periplasmic (signal peptide) ABC transporter protein\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"BN406_03674 extracellular solute-binding protein\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"BN406_03702 amino acid ABC transporter substrate-binding protein\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"BN406_03709 periplasmic component of amino acid ABC-type transporter\/signal transduction system\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"BN406_03847 extracellular solute-binding protein, family 3\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"BN406_03899 ABC transporter periplasmic substrate-binding protein\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"BN406_03961 ABC transporter substrate-binding protein\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"BN406_04007 ABC transporter substrate-binding protein\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"BN406_04151 ABC transporter substrate-binding protein\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"BN406_05043 ABC transporter periplasmic subunit\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"BN406_05287 amino acid uptake ABC transporter substrate-binding protein precursor\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"BN406_05569 ABC transporter substrate-binding protein\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"BN406_05938 ABC transporter substrate-binding protein\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"BN406_05973 ABC transporter periplasmic protein\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"BN406_06246 ABC transporter amino acid-binding protein\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"BN406_00196 transport system permease ABC transporter protein\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_00197 transport system permease ABC transporter protein\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_01604 amino acid ABC transporter permease\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_01605 amino acid ABC transporter permease\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_02816 amino-acid transport system permease ABC transporter protein\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_03049 amino-acid transport system permease ABC transporter protein\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_03675 polar amino acid ABC transporter, inner membrane subunit\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_03703 putative membrane protein\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_03710 unnamed protein product\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_03849 polar amino acid ABC transporter inner membrane subunit\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_03850 ehuC; EhuC\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_03897 ABC transporter permease\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_03898 ABC transporter permease\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_03959 polar amino acid ABC transporter inner membrane subunit\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_03960 polar amino acid ABC transporter inner membrane subunit\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_04008 ABC transporter permease\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_05044 ABC transporter permease\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_05046 polar amino acid ABC transporter inner membrane subunit\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_05570 polar amino acid ABC transporter inner membrane subunit\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_05936 polar amino acid ABC transporter inner membrane subunit\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_05937 amino acid ABC transporter permease\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_05975 polar amino acid ABC transporter inner membrane subunit\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_06244 ectoine\/hydroxyectoine ABC transporter permease EhuD\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_06245 amino acid ABC transporter permease\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"BN406_00199 occP; Octopine permease ATP-binding protein P\tK02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_03676 artM; Arginine transport ATP-binding protein ArtM\tK02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_03704 glnQ1; Glutamine transport ATP-binding protein GlnQ\tK02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_03711 glnQ3; Glutamine transport ATP-binding protein GlnQ\tK02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_03766 glnQ5; Glutamine transport ATP-binding protein GlnQ\tK02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_03848 putative amino-acid ABC transporter ATP-binding protein y4tH\tK02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_03900 glnQ7; Glutamine transport ATP-binding protein GlnQ\tK02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_03958 aapP3; General L-amino acid transport ATP-binding protein AapP\tK02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_04009 glnQ9; Glutamine transport ATP-binding protein GlnQ\tK02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_05042 aapP5; General L-amino acid transport ATP-binding protein AapP\tK02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_05935 artM1; Arginine transport ATP-binding protein ArtM\tK02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_05974 artM3; Arginine transport ATP-binding protein ArtM\tK02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_06247 putative amino-acid ABC transporter ATP-binding protein y4tH\tK02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"BN406_05799 oppA; oligopeptide uptake ABC transporter substrate-binding protein precursor\tK15580 oppA; oligopeptide transport system substrate-binding protein" }, { "name":"BN406_05798 oppB; Oligopeptide transport system permease protein oppB\tK15581 oppB; oligopeptide transport system permease protein" }, { "name":"BN406_05797 ABC transporter\tK15582 oppC; oligopeptide transport system permease protein" }, { "name":"BN406_05796 yejF3; putative ABC transporter ATP-binding protein YejF\tK10823 oppF; oligopeptide transport system ATP-binding protein" }, { "name":"BN406_00356 dppA; Periplasmic dipeptide transport protein\tK12368 dppA; dipeptide transport system substrate-binding protein" }, { "name":"BN406_00357 dppB1; Dipeptide transport system permease protein dppB\tK12369 dppB; dipeptide transport system permease protein" }, { "name":"BN406_00358 dppC1; Dipeptide transport system permease protein dppC\tK12370 dppC; dipeptide transport system permease protein" }, { "name":"BN406_00359 dppD; Dipeptide transport ATP-binding protein DppD\tK12371 dppD; dipeptide transport system ATP-binding protein" }, { "name":"BN406_00360 dppF; Dipeptide transport ATP-binding protein DppF\tK12372 dppF; dipeptide transport system ATP-binding protein" }, { "name":"BN406_01382 Putative binding protein BRA0576\/BS1330_II0571\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_01680 peptide-binding periplasmic ABC transporter protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_02078 periplasmic binding protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_02083 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_02262 dppA2; dipeptide binding periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_02385 dipeptide-binding periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_02441 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_02443 peptide-binding periplasmic ABC transporter protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_02678 peptide ABC transporter\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_02825 periplasmic binding ABC transporter protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_03579 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_03756 extracellular solute-binding protein, family 5\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_03771 family 5 extracellular solute-binding protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_03801 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_03923 Periplasmic dipeptide transport protein precursor\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_03929 ABC transporter substrate-binding protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_04327 putative oligopeptidemurein peptide ABC transporter periplasmic solute-binding protein precursor\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_04488 probabable ABC transporter, periplasmic solute-binding protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_04491 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_04522 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_04632 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_04765 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_05033 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_05778 orf23; dipeptide uptake ABC transporter substrate-binding protein precursor\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_05890 mureinpeptideoligopeptide ABC transporter substrate-binding protein precursor\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_06001 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_06209 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_06514 ABC transporter periplasmic protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_06548 peptide ABC transporter substrate-binding protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"BN406_01681 appB; Oligopeptide transport system permease protein AppB\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_02079 ABC transporter permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_02261 dppB3; dipeptide transport system permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_02389 putative peptide ABC transporter permease protein y4tP\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_02444 peptide transport system permease ABC transporter protein\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_02675 peptide ABC transporter permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_02822 transport system permease ABC transporter protein\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_03577 ABC transporter integral membrane protein\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_03757 binding-protein-dependent transport systems inner membrane component\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_03774 putative transmembrane ABC transporter\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_03796 ABC transporter permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_03920 putative peptide ABC transporter permease protein y4tP\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_03927 dppB; Dipeptide transport system permease protein dppB\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_04326 oligopeptidemurein peptide ABC transporter permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_04487 ABC transporter permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_04521 ABC transporter\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_04631 ABC transporter integral membrane protein\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_04766 ABC transporter permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_05032 gsiC; Glutathione transport system permease protein gsiC\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_05889 mureinpeptideoligopeptide ABC transporter permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_06000 oligopeptidemurein peptide ABC transporter permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_06208 gsiC; Glutathione transport system permease protein gsiC\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_06515 oligopeptide ABC transporter permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_06547 peptide ABC transporter permease\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"BN406_01682 peptide transport system permease ABC transporter protein\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_02080 ABC transporter permease\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_02260 ddpC; putative D,D-dipeptide transport system permease protein ddpC\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_02388 dppC3; Dipeptide transport system permease protein dppC\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_02445 peptide transport system permease\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_02676 peptide ABC transporter permease\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_02821 transport system permease ABC transporter protein\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_03576 ABC transporter permease\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_03758 binding-protein-dependent transport systems inner membrane component\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_03775 binding-protein-dependent transport systems inner membrane component\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_03797 ABC transporter permease\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_03921 putative peptide ABC transporter permease protein y4tQ\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_03926 ABC transporter permease\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_04325 ABC transporter\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_04486 ABC transporter integral membrane protein\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_04520 ABC transporter permease\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_04630 ABC transporter\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_04767 ABC transporter permease\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_05031 dppC; Dipeptide transport system permease protein dppC\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_05888 ABC transporter\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_05999 ABC transporter\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_06207 nickel-transporting ATPase\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_06516 ABC transporter\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_06546 putative oligopeptide ABC transporter permease\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"BN406_01678 gsiA1; Glutathione import ATP-binding protein GsiA\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_02081 ABC transporter ATP-binding protein\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_02259 oppD1; Oligopeptide transport ATP-binding protein OppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_02387 gsiA3; Glutathione import ATP-binding protein GsiA\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_02448 oppD3; Oligopeptide transport ATP-binding protein OppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_02677 gsiA5; Glutathione import ATP-binding protein GsiA\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_02824 oppD5; Oligopeptide transport ATP-binding protein OppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_03575 oligopeptide\/dipeptide ABC transporter ATPase\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_03754 oppD1; Oligopeptide transport ATP-binding protein OppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_03776 oppD3; Oligopeptide transport ATP-binding protein OppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_03798 appD; Oligopeptide transport ATP-binding protein AppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_03922 gsiA1; Glutathione import ATP-binding protein GsiA\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_03925 gsiA3; Glutathione import ATP-binding protein GsiA\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_04324 Nickel-transporting ATPase, Molybdate-transporting ATPase\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_04485 oppD5; Oligopeptide transport ATP-binding protein OppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_04519 gsiA5; Glutathione import ATP-binding protein GsiA\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_04629 oppD7; Oligopeptide transport ATP-binding protein OppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_04768 ABC transporter ATP-binding protein\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_05030 putative peptide ABC transporter ATP-binding protein y4tR\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_05891 gsiA1; Glutathione import ATP-binding protein GsiA\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_05998 Nickel-transporting ATPase, Molybdate-transporting ATPase\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_06517 gsiA3; Glutathione import ATP-binding protein GsiA\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_06545 gsiA5; Glutathione import ATP-binding protein GsiA\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_02258 ykfD; Putative oligopeptide transport ATP-binding protein YkfD\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_02449 appF1; Oligopeptide transport ATP-binding protein AppF\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_02823 appF3; Oligopeptide transport ATP-binding protein AppF\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_03777 appF1; Oligopeptide transport ATP-binding protein AppF\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_03799 appF3; Oligopeptide transport ATP-binding protein AppF\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_04484 appF5; Oligopeptide transport ATP-binding protein AppF\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_04628 Putative peptide import ATP-binding protein BMEII0864\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_05029 gsiA7; Glutathione import ATP-binding protein GsiA\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_06206 appF; Oligopeptide transport ATP-binding protein AppF\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"BN406_03289 putative protein y4wM\tK13893 yejA; microcin C transport system substrate-binding protein" }, { "name":"BN406_03288 yejB; Inner membrane ABC transporter permease protein yejB\tK13894 yejB; microcin C transport system permease protein" }, { "name":"BN406_03287 yejE; Inner membrane ABC transporter permease protein yejE\tK13895 yejE; microcin C transport system permease protein" }, { "name":"BN406_03286 yejF; putative ABC transporter ATP-binding protein YejF\tK13896 yejF; microcin C transport system ATP-binding protein" }, { "name":"BN406_02277 hmuT; hemin binding periplasmic transmembrane protein\tK25132 hmuT; heme transport system substrate-binding protein" }, { "name":"BN406_02278 hmuU; Hemin transport system permease protein hmuU\tK25133 hmuU; heme transport system permease protein" }, { "name":"BN406_02279 hmuV; Hemin import ATP-binding protein HmuV\tK10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]" }, { "name":"BN406_04698 ABC transporter substrate-binding protein\tK25286 fagD; iron-siderophore transport system substrate-binding protein" }, { "name":"BN406_04697 ABC transporter integral membrane protein\tK23186 fepD; iron-siderophore transport system permease protein" }, { "name":"BN406_04696 ABC transporter integral membrane protein\tK23187 fepG; iron-siderophore transport system permease protein" }, { "name":"BN406_04695 yusV; putative siderophore transport system ATP-binding protein YusV\tK23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]" }, { "name":"BN406_02095 fhuP; ferrichrome\/ferrioxamine B periplasmic transporter\tK02016 ABC.FEV.S; iron complex transport system substrate-binding protein" }, { "name":"BN406_05428 ABC transporter periplasmic protein\tK02016 ABC.FEV.S; iron complex transport system substrate-binding protein" }, { "name":"BN406_06600 btuF; ABC transporter substrate-binding protein\tK02016 ABC.FEV.S; iron complex transport system substrate-binding protein" }, { "name":"BN406_05429 ABC transporter\tK02015 ABC.FEV.P; iron complex transport system permease protein" }, { "name":"BN406_06599 ABC transporter permease\tK02015 ABC.FEV.P; iron complex transport system permease protein" }, { "name":"BN406_05430 iron ABC transporter ATP-binding protein\tK02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]" }, { "name":"BN406_06598 ABC transporter ATP-binding protein\tK02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]" }, { "name":"BN406_01644 znuA; High-affinity zinc uptake system protein znuA\tK09815 znuA; zinc transport system substrate-binding protein" }, { "name":"BN406_01642 znuB; High-affinity zinc uptake system membrane protein znuB\tK09816 znuB; zinc transport system permease protein" }, { "name":"BN406_01643 znuC; Zinc import ATP-binding protein ZnuC\tK09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]" }, { "name":"BN406_02882 sitA; IRON-binding periplasmic ABC transporter protein\tK11604 sitA; manganese\/iron transport system substrate-binding protein" }, { "name":"BN406_02884 yfeC; Chelated iron transport system membrane protein yfeC\tK11605 sitC; manganese\/iron transport system permease protein" }, { "name":"BN406_02885 putative iron transport system membrane protein HI_0359\tK11606 sitD; manganese\/iron transport system permease protein" }, { "name":"BN406_02883 yfeB; Chelated iron transport system membrane protein YfeB\tK11607 sitB; manganese\/iron transport system ATP-binding protein" }, { "name":"BN406_00543 hypothetical protein\tK03523 bioY; biotin transport system substrate-specific component" }, { "name":"BN406_00544 hypothetical protein\tK16783 bioN; biotin transport system permease protein" }, { "name":"BN406_00545 bioM; Biotin transport ATP-binding protein BioM\tK16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]" }, { "name":"BN406_06038 rkpT1; RkpT\tK09688 kpsM; capsular polysaccharide transport system permease protein" }, { "name":"BN406_06050 rkpR_kpsE; polysaccharide export-assoiated protein\tK10107 kpsE; capsular polysaccharide transport system permease protein" }, { "name":"BN406_06049 kpsT; Polysialic acid transport ATP-binding protein KpsT\tK09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]" }, { "name":"BN406_00889 hypothetical protein\tK07091 lptF; lipopolysaccharide export system permease protein" }, { "name":"BN406_00888 hypothetical protein\tK11720 lptG; lipopolysaccharide export system permease protein" }, { "name":"BN406_00015 putative ABC transporter ATP-binding protein R00382\tK06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]" }, { "name":"BN406_04269 nodJ; Nodulation protein J\tK09694 nodJ; lipooligosaccharide transport system permease protein" }, { "name":"BN406_04270 nodI; Nod factor export ATP-binding protein I\tK09695 nodI; lipooligosaccharide transport system ATP-binding protein" }, { "name":"BN406_04367 nosY; NosY permease\tK19341 nosY; Cu-processing system permease protein" }, { "name":"BN406_04366 nosF; Copper transport ATP-binding protein NosF\tK19340 nosF; Cu-processing system ATP-binding protein" }, { "name":"BN406_05789 ybhR; Inner membrane transport permease ybhR\tK25180 ybhR; drug efflux transport system permease protein" }, { "name":"BN406_05788 ybhS; Inner membrane transport permease ybhS\tK25181 ybhS; drug efflux transport system permease protein" }, { "name":"BN406_05787 ybhF; putative ABC transporter ATP-binding protein YbhF\tK25182 ybhF; drug efflux transport system ATP-binding protein" }, { "name":"BN406_05786 UPF0194 membrane protein\tK25183 ybhG; membrane fusion protein YbhG" }, { "name":"BN406_01021 lipoprotein releasing system transmembrane protein LolC\/E family\tK09808 lolC_E_F; lipoprotein-releasing system permease protein" }, { "name":"BN406_06303 hypothetical protein\tK09808 lolC_E_F; lipoprotein-releasing system permease protein" }, { "name":"BN406_01022 lolD; Lipoprotein-releasing system ATP-binding protein LolD\tK09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]" }, { "name":"BN406_06302 lolD2; Lipoprotein-releasing system ATP-binding protein LolD 2\tK09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]" }, { "name":"BN406_03034 ccmD; HEME exporter D (cytochrome C-type biogenesis protein) transmembrane\tK02196 ccmD; heme exporter protein D" }, { "name":"BN406_03033 ccmC; HEME exporter C (cytochrome C-type biogenesis protein) transmembrane\tK02195 ccmC; heme exporter protein C" }, { "name":"BN406_03032 ccmB; HEME exporter B (cytochrome C-type biogenesis protein) transmembrane\tK02194 ccmB; heme exporter protein B" }, { "name":"BN406_03031 ccmA; Cytochrome c biogenesis ATP-binding export protein CcmA\tK02193 ccmA; heme exporter protein A [EC:7.6.2.5]" }, { "name":"BN406_02514 hypothetical protein\tK09811 ftsX; cell division transport system permease protein" }, { "name":"BN406_02513 cell division ATP-binding protein FtsE\tK09812 ftsE; cell division transport system ATP-binding protein" }, { "name":"BN406_01621 transport transmembrane protein\tK01992 ABC-2.P; ABC-2 type transport system permease protein" }, { "name":"BN406_06471 hypothetical protein\tK01992 ABC-2.P; ABC-2 type transport system permease protein" }, { "name":"BN406_01622 yadG; putative ABC transporter ATP-binding protein YadG\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"BN406_06472 ABC transporter ATP-binding protein\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"BN406_03022 hypothetical protein\tK02004 ABC.CD.P; putative ABC transport system permease protein" }, { "name":"BN406_03021 ybbA; putative ABC transporter ATP-binding protein YbbA\tK02003 ABC.CD.A; putative ABC transport system ATP-binding protein" }, { "name":"BN406_01476 sufC; putative ATP-dependent transporter SufC\tK09013 sufC; Fe-S cluster assembly ATP-binding protein" }, { "name":"BN406_02671 hypothetical protein\tK14347 SLC10A7; solute carrier family 10 (sodium\/bile acid cotransporter), member 7" }, { "name":"BN406_01313 norM; putative multidrug resistance protein NorM\tK26939 norM; MATE family, multidrug efflux pump" }, { "name":"BN406_00182 MATE efflux family protein\tK26937 dinF; MATE family, multidrug efflux pump" }, { "name":"BN406_05829 integral membrane transporter protein\tK03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter" }, { "name":"BN406_01568 TARNSPORT protein transmembrane\tK05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter" }, { "name":"BN406_04526 Permease, MFS\tK28762 niaP; MFS transporter, niacin uptake porter" }, { "name":"BN406_06238 nitrate transporter protein\tK02575 NRT2; MFS transporter, NNP family, nitrate\/nitrite transporter" }, { "name":"BN406_02486 cmlA; Chloramphenicol resistance protein\tK18552 cmlA; MFS transporter, DHA1 family, chloramphenicol\/florfenicol resistance protein" }, { "name":"BN406_01312 major facilitator superfamily protein\tK08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein" }, { "name":"BN406_01515 transporter\tK07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein" }, { "name":"BN406_01516 major facilitator superfamily protein\tK07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein" }, { "name":"BN406_03009 Bcr\/CflA family multidrug resistance transporter\tK07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein" }, { "name":"BN406_00133 transport transmembrane protein\tK19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein" }, { "name":"BN406_04833 major facilitator superfamily protein\tK19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein" }, { "name":"BN406_06586 ytbD; putative MFS-type transporter ytbD\tK19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein" }, { "name":"BN406_02754 multidrug efflux system protein\tK03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein" }, { "name":"BN406_05295 EmrB\/QacA subfamily drug resistance transporter\tK03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein" }, { "name":"BN406_04957 major facilitator superfamily protein\tK08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein" }, { "name":"BN406_04982 major facilitator superfamily protein\tK08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein" }, { "name":"BN406_00515 fsr; Fosmidomycin resistance protein\tK08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein" }, { "name":"BN406_03116 transmembrane protein\tK06902 UMF1; MFS transporter, UMF1 family" }, { "name":"BN406_03344 transporter\tK05373 ybtX; MFS transporter, putative signal transducer" }, { "name":"BN406_02470 ptsP; phosphoenolpyruvate phosphotransferase PTSP (enzyme I-Ntr) protein\tK08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]" }, { "name":"BN406_03174 phosphocarrier HPr\tK02784 ptsH; phosphocarrier protein HPr" }, { "name":"BN406_03175 IIA component of PTS system protein\tK02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]" }, { "name":"BN406_00012 ptsN; nitrogen regulatory IIA protein\tK02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]" }, { "name":"BN406_01995 aqpZ1; Aquaporin Z 1\tK06188 aqpZ; aquaporin" }, { "name":"BN406_04088 aqpZ2; Aquaporin Z 2\tK06188 aqpZ; aquaporin" }, { "name":"BN406_00811 transport transmembrane protein\tK28614 aqpS; aquaglyceroporin" }, { "name":"BN406_06311 Ion transport 2 domain-containing protein\tK10716 kch; voltage-gated potassium channel" }, { "name":"BN406_02990 amtB; ammonium transporter\tK03320 amt; ammonium transporter, Amt family" }, { "name":"BN406_00612 gst1; glutathione S-transferase\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_00615 glutathione S-transferase\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_00909 hypothetical protein\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_01879 gst10; glutathione S-transferase\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_01949 gst6; glutathione S-transferase\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_03066 gst8; glutathione S-transferase\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_03245 gst9; glutathione S-transferase\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_03434 gst3; glutathione S-transferase\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_03458 gst4; glutathione S-transferase\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_03542 gst14; gst14 glutatione S-transferase\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_04066 glutathione S-transferase domain protein\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_04552 gst12; Gst12 glutathione-S-transferase\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_05128 gstA; Protein gstA\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_05415 gst12; probabable glutathione S-transferase protein\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_06253 glutathione S-transferase domain-containing protein\tK00799 GST; glutathione S-transferase [EC:2.5.1.18]" }, { "name":"BN406_00188 mscL; large-conductance mechanosensitive channel\tK03282 mscL; large conductance mechanosensitive channel" }, { "name":"BN406_00594 hypothetical protein\tK05802 mscK; potassium-dependent mechanosensitive channel" }, { "name":"BN406_01735 mechanosensitive ion channel protein MscS\tK05802 mscK; potassium-dependent mechanosensitive channel" }, { "name":"BN406_04089 mechanosensitive ion channel protein MscS\tK22044 ybiO; moderate conductance mechanosensitive channel" }, { "name":"BN406_04312 mechanosensitive ion channel MscS\tK22044 ybiO; moderate conductance mechanosensitive channel" }, { "name":"BN406_05899 mechanosensitive ion channel protein MscS\tK22044 ybiO; moderate conductance mechanosensitive channel" }, { "name":"BN406_01134 magnesium transporter\tK06213 mgtE; magnesium transporter" }, { "name":"BN406_00270 motA; flagellar motor protein MotA\tK02556 motA; chemotaxis protein MotA" }, { "name":"BN406_00290 motB; flagellar motor protein MotB\tK02557 motB; chemotaxis protein MotB" }, { "name":"BN406_01242 exbB; Biopolymer transport protein exbB\tK03561 exbB; biopolymer transport protein ExbB" }, { "name":"BN406_01243 TonB system transport protein ExbD\tK03559 exbD; biopolymer transport protein ExbD" }, { "name":"BN406_02599 tolQ; transport transmembrane protein\tK03562 tolQ; biopolymer transport protein TolQ" }, { "name":"BN406_02598 tolR; transport transmembrane protein\tK03560 tolR; biopolymer transport protein TolR" }, { "name":"BN406_00485 corA2; magnesium\/cobalt transporter CorA\tK03284 corA; magnesium transporter" }, { "name":"BN406_03450 corA1; magnesium\/cobalt transporter CorA\tK03284 corA; magnesium transporter" }, { "name":"BN406_00528 hypothetical protein\tK16074 zntB; zinc transporter" }, { "name":"BN406_01121 ccrB; camphor resistance protein CrcB\tK06199 crcB; fluoride exporter" }, { "name":"BN406_01417 UPF0053 protein\tK03699 tlyC; magnesium and cobalt exporter, CNNM family" }, { "name":"BN406_02533 hypothetical protein\tK03699 tlyC; magnesium and cobalt exporter, CNNM family" }, { "name":"BN406_00908 ropB; 22 kDa outer membrane protein\tK16079 omp31; outer membrane immunogenic protein" }, { "name":"BN406_01437 ropB2; outer-membrane protein\tK16079 omp31; outer membrane immunogenic protein" }, { "name":"BN406_03979 porin\tK16079 omp31; outer membrane immunogenic protein" }, { "name":"BN406_01248 hypothetical protein\tK06076 fadL; long-chain fatty acid transport protein" }, { "name":"BN406_02232 outer membrane receptor protein\tK16091 fecA; Fe(3+) dicitrate transport protein" }, { "name":"BN406_03345 outer membrane receptor protein\tK15721 fyuA; pesticin\/yersiniabactin receptor" }, { "name":"BN406_01765 hasR; putative IRON\/HEME transport protein\tK16087 TC.FEV.OM3; hemoglobin\/transferrin\/lactoferrin receptor protein" }, { "name":"BN406_02236 iron transport protein\tK16087 TC.FEV.OM3; hemoglobin\/transferrin\/lactoferrin receptor protein" }, { "name":"BN406_02047 TonB-dependent siderophore receptor\tK02014 TC.FEV.OM; iron complex outermembrane recepter protein" }, { "name":"BN406_02093 foxA; ferrioxamine B receptor precursor protein\tK02014 TC.FEV.OM; iron complex outermembrane recepter protein" }, { "name":"BN406_02428 TonB-dependent siderophore receptor\tK02014 TC.FEV.OM; iron complex outermembrane recepter protein" }, { "name":"BN406_04699 TonB-dependent siderophore receptor\tK02014 TC.FEV.OM; iron complex outermembrane recepter protein" }, { "name":"BN406_01245 tolC; outer membrane secretion protein\tK12340 tolC; outer membrane protein" }, { "name":"BN406_05599 exoF; Exopolysaccharide production protein exoF\tK16552 exoF; polysaccharide biosynthesis\/export protein ExoF" }, { "name":"BN406_05905 polysaccharide export protein\tK16552 exoF; polysaccharide biosynthesis\/export protein ExoF" }, { "name":"BN406_00213 rkpU; capsule polysaccharide exporter protein\tK01991 wza; polysaccharide biosynthesis\/export protein" }, { "name":"BN406_00969 polysaccharide export system periplasmic transmembrane protein\tK01991 wza; polysaccharide biosynthesis\/export protein" }, { "name":"BN406_06070 polysaccharide export protein\tK01991 wza; polysaccharide biosynthesis\/export protein" }, { "name":"BN406_01234 omp; outer membrane transmembrane protein\tK07277 SAM50; outer membrane protein insertion porin family" }, { "name":"BN406_01989 hypothetical protein\tK05807 bamD; outer membrane protein assembly factor BamD" }, { "name":"BN406_02853 surface antigen (D15)\tK07278 tamA; translocation and assembly module TamA" }, { "name":"BN406_02854 signal peptide protein\tK09800 tamB; translocation and assembly module TamB" }, { "name":"BN406_00104 hypothetical protein\tK21449 ata; trimeric autotransporter adhesin" }, { "name":"BN406_00105 hypothetical protein\tK21449 ata; trimeric autotransporter adhesin" }, { "name":"BN406_00016 hypothetical protein\tK09774 lptA; lipopolysaccharide export system protein LptA" }, { "name":"BN406_00017 hypothetical protein\tK11719 lptC; lipopolysaccharide export system protein LptC" }, { "name":"BN406_00887 hypothetical protein\tK04744 lptD; LPS-assembly protein" }, { "name":"BN406_03127 hypothetical protein\tK03643 lptE; LPS-assembly lipoprotein" }, { "name":"BN406_00517 signal peptide protein\tK07274 mipA; MipA family protein" }, { "name":"BN406_00041 hypothetical protein\tK06189 corC; hemolysin (HlyC) family protein" }, { "name":"BN406_04152 potE; Putrescine-ornithine antiporter\tK03756 potE; putrescine:ornithine antiporter" }, { "name":"BN406_04641 arcD1; Arginine\/ornithine antiporter\tK03758 arcD; arginine:ornithine antiporter \/ lysine permease" }, { "name":"BN406_04642 arcD3; Arginine\/ornithine antiporter\tK03758 arcD; arginine:ornithine antiporter \/ lysine permease" }, { "name":"BN406_02038 amino-acid permease\tK28029 UGA4; amino acid or GABA permease" }, { "name":"BN406_03227 putative transporter R00093\tK16238 eat; ethanolamine permease" }, { "name":"BN406_05122 hypothetical protein\tK07238 TC.ZIP; zinc transporter, ZIP family" }, { "name":"BN406_00057 bepE1; Efflux pump membrane transporter BepE\tK18902 bpeF; multidrug efflux pump" }, { "name":"BN406_01962 transport transmembrane protein\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_02311 transport transmembrane protein\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_03322 acrB; Acriflavine resistance protein B\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_04278 nolG; Nodulation protein nolG\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_04638 bepG; Efflux pump membrane transporter BepG\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_05368 bepG; Efflux pump membrane transporter BepG\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_02264 emrE; methyl viologen\/ethidium resistance transmembrane protein\tK03297 emrE; small multidrug resistance pump" }, { "name":"BN406_01117 putative membrane protein\tK11741 sugE; quaternary ammonium compound-resistance protein SugE" }, { "name":"BN406_01352 multidrug transmembrane resistance signal peptide protein\tK11742 mdtI; spermidine export protein MdtI" }, { "name":"BN406_01351 multidrug transmembrane resistance signal peptide protein\tK11743 mdtJ; spermidine export protein MdtJ" }, { "name":"BN406_03432 pecM; Protein pecM\tK15269 pecM; probable blue pigment (indigoidine) exporter" }, { "name":"BN406_02815 hypothetical protein\tK15270 sam; S-adenosylmethionine uptake transporter" }, { "name":"BN406_00853 hypothetical protein\tK05786 rarD; chloramphenicol-sensitive protein RarD" }, { "name":"BN406_00702 hypothetical protein\tK09771 TC.SMR3; small multidrug resistance family-3 protein" }, { "name":"BN406_01450 hypothetical protein\tK05020 opuD; glycine betaine transporter" }, { "name":"BN406_00162 chaA; calcium\/proton antiporter transmembrane protein\tK07300 chaA; Ca2+:H+ antiporter" }, { "name":"BN406_04150 Ca2+\/H+ antiporter\tK07300 chaA; Ca2+:H+ antiporter" }, { "name":"BN406_05717 hypothetical protein\tK07301 yrbG; cation:H+ antiporter" }, { "name":"BN406_05185 dctA; C4-dicarboxylate transporter DctA\tK11103 dctA; aerobic C4-dicarboxylate transport protein" }, { "name":"BN406_04819 Na+\/H+ antiporter\tK03313 nhaA; Na+:H+ antiporter, NhaA family" }, { "name":"BN406_00462 kefBC; Glutathione-regulated potassium-efflux system protein\tK11747 kefB; glutathione-regulated potassium-efflux system protein KefB" }, { "name":"BN406_05670 kefBC; Glutathione-regulated potassium-efflux system protein\tK11747 kefB; glutathione-regulated potassium-efflux system protein KefB" }, { "name":"BN406_04609 ybaL; Inner membrane protein ybaL\tK26735 KEA4_5_6; K+:H+ antiporter" }, { "name":"BN406_01367 trkH; TRK system potassium uptake transmembrane protein\tK03498 trkH; trk\/ktr system potassium uptake protein" }, { "name":"BN406_04658 cation transporter\tK03498 trkH; trk\/ktr system potassium uptake protein" }, { "name":"BN406_01194 trkA; Trk system potassium uptake protein trkA\tK03499 trkA; trk\/ktr system potassium uptake protein" }, { "name":"BN406_02878 permease transmembrane protein\tK24206 uacT; uric acid transporter" }, { "name":"BN406_02879 ygfU; Putative purine permease ygfU\tK24206 uacT; uric acid transporter" }, { "name":"BN406_06524 ygfU; Putative purine permease ygfU\tK24206 uacT; uric acid transporter" }, { "name":"BN406_04677 Permease\tK06901 pbuG; adenine\/guanine\/hypoxanthine permease" }, { "name":"BN406_05871 purP; putative adenine permease PurP\tK06901 pbuG; adenine\/guanine\/hypoxanthine permease" }, { "name":"BN406_02203 membrane transporter\tK05782 benE; benzoate membrane transport protein" }, { "name":"BN406_00386 chrA; chromate transporter\tK07240 chrA; chromate transporter" }, { "name":"BN406_01530 transport transmembrane protein\tK03321 TC.SULP; sulfate permease, SulP family" }, { "name":"BN406_06587 ybaR; Putative sulfate transporter ybaR\tK03321 TC.SULP; sulfate permease, SulP family" }, { "name":"BN406_01445 periplasmic binding protein\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_01649 mannitol-binding periplasmic signal peptide protein\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_01867 hypothetical protein\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_04942 TRAP dicarboxylate transporter subunit DctP\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_04997 ABC transporter substrate-binding protein\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_05098 ABC transporter substrate-binding protein\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_05564 putative C4-dicarboxylate transporter periplasmic solute-binding protein precursor\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_05732 dctP; periplasmic C4-dicarboxylate transport protein\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_06236 substrate-binding protein\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_06298 TRAP dicarboxylate transporter subunit DctP\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_06352 TRAP-type large permease component\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_06370 putative ABC transporter\tK11688 dctP; TRAP-type transport system periplasmic protein" }, { "name":"BN406_01647 hypothetical protein\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_01866 hypothetical protein\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_04944 tripartite AtP-independent periplasmic transporter subunit DctQ\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_04998 hypothetical protein\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_05100 tripartite AtP-independent periplasmic transporter subunit DctQ\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_05565 putative small C4-dicarboxylate uptake permease protein\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_05733 tripartite AtP-independent periplasmic transporter subunit DctQ\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_06235 permease\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_06299 TRAP dicarboxylate transporter\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_06350 tripartite AtP-independent periplasmic transporter subunit DctQ\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_06369 putative TRAP dicarboxylate transporter\tK11689 dctQ; TRAP-type transport system small permease protein" }, { "name":"BN406_01648 TRAP dicarboxylate transporter subunit DctM\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_01865 transmembrane protein\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_04943 Putative TRAP transporter large permease protein HI_1029\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_04999 TRAP dicarboxylate transporter subunit DctM\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_05099 Putative TRAP transporter large permease protein HI_1029\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_05566 large C4-dicarboxylate uptake permease, DedA family protein\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_05734 ygiK; putative protein ygiK\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_06234 TRAP dicarboxylate transporter subunit DctM\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_06300 hypothetical protein\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_06351 TRAP dicarboxylate transporter subunit DctM\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_06368 siaT; Sialic acid TRAP transporter permease protein siaT\tK11690 dctM; TRAP-type transport system large permease protein" }, { "name":"BN406_01446 transmembrane protein\tK21393 dctQM; TRAP-type transport system permease protein" }, { "name":"BN406_01410 hypothetical protein\tK03324 yjbB; phosphate:Na+ symporter" }, { "name":"BN406_05688 Na+\/Picotransporter\tK03324 yjbB; phosphate:Na+ symporter" }, { "name":"BN406_06505 sodium-dependent inorganic phosphate (Pi) transporter\tK03324 yjbB; phosphate:Na+ symporter" }, { "name":"BN406_02766 phaAB; putative K(+)\/H(+) antiporter subunit A\/B\tK05559 phaA; multicomponent K+:H+ antiporter subunit A" }, { "name":"BN406_02767 phaC; putative K(+)\/H(+) antiporter subunit C\tK05560 phaC; multicomponent K+:H+ antiporter subunit C" }, { "name":"BN406_02768 phaD; putative K(+)\/H(+) antiporter subunit D\tK05561 phaD; multicomponent K+:H+ antiporter subunit D" }, { "name":"BN406_02769 phaE; putative K(+)\/H(+) antiporter subunit E\tK05562 phaE; multicomponent K+:H+ antiporter subunit E" }, { "name":"BN406_02770 putative membrane protein\tK05563 phaF; multicomponent K+:H+ antiporter subunit F" }, { "name":"BN406_02771 phaG; putative K(+)\/H(+) antiporter subunit G\tK05564 phaG; multicomponent K+:H+ antiporter subunit G" }, { "name":"BN406_00648 phaA2; monovalent cation\/H+ antiporter subunit A\tK05565 mnhA; multicomponent Na+:H+ antiporter subunit A" }, { "name":"BN406_00649 phaB2; monovalent cation\/H+ antiporter subunit B\tK05566 mnhB; multicomponent Na+:H+ antiporter subunit B" }, { "name":"BN406_00650 phaC2; monovalent cation\/H+ antiporter subunit C\tK05567 mnhC; multicomponent Na+:H+ antiporter subunit C" }, { "name":"BN406_00651 phaD2; monovalent cation\/H+ antiporter subunit D\tK05568 mnhD; multicomponent Na+:H+ antiporter subunit D" }, { "name":"BN406_04574 oxidoreductase\tK05568 mnhD; multicomponent Na+:H+ antiporter subunit D" }, { "name":"BN406_04576 NADH dehydrogenase (quinone)\tK05568 mnhD; multicomponent Na+:H+ antiporter subunit D" }, { "name":"BN406_00652 phaE2; monovalent cation\/H+ antiporter subunit E\tK05569 mnhE; multicomponent Na+:H+ antiporter subunit E" }, { "name":"BN406_00653 phaF2; PhaF2 protein\tK05570 mnhF; multicomponent Na+:H+ antiporter subunit F" }, { "name":"BN406_00654 UPF0091 protein\tK05571 mnhG; multicomponent Na+:H+ antiporter subunit G" }, { "name":"BN406_05593 exoT; Succinoglycan biosynthesis transport protein exoT\tK16553 exoT; succinoglycan exporter" }, { "name":"BN406_00030 mviN; virulence factor MviN-like protein\tK03980 murJ; putative peptidoglycan lipid II flippase" }, { "name":"BN406_01040 auxin efflux carrier\tK13936 mdcF; malonate transporter and related proteins" }, { "name":"BN406_01426 mdcF; Putative malonate transporter\tK13936 mdcF; malonate transporter and related proteins" }, { "name":"BN406_03351 probabable permease\tK13936 mdcF; malonate transporter and related proteins" }, { "name":"BN406_00486 kup1; putative potassium transport system protein kup 1\tK03549 kup; KUP system potassium uptake protein" }, { "name":"BN406_04735 kup2; putative potassium transport system protein kup 2\tK03549 kup; KUP system potassium uptake protein" }, { "name":"BN406_02015 amino acid efflux protein\tK05834 rhtB; homoserine\/homoserine lactone efflux protein" }, { "name":"BN406_02729 lysine exporter protein LysE\/YggA\tK05834 rhtB; homoserine\/homoserine lactone efflux protein" }, { "name":"BN406_02907 amino acid efflux transmembrane protein\tK05835 rhtC; threonine efflux protein" }, { "name":"BN406_03070 lysine exporter protein LysE\/YggA\tK05835 rhtC; threonine efflux protein" }, { "name":"BN406_00865 azlC; azaleucine resistance protein\tK26605 azlC; branched chain amino acid efflux pump" }, { "name":"BN406_01983 hypothetical protein\tK26605 azlC; branched chain amino acid efflux pump" }, { "name":"BN406_00866 putative membrane protein\tK26606 azlD; branched chain amino acid efflux pump" }, { "name":"BN406_01982 unnamed protein product\tK26606 azlD; branched chain amino acid efflux pump" }, { "name":"BN406_03972 putative 52,8 kDa protein in TAR-I ttuC' 3'region\tK07793 tctA; putative tricarboxylic transport membrane protein" }, { "name":"BN406_05106 putative 52,8 kDa protein in TAR-I ttuC' 3'region\tK07793 tctA; putative tricarboxylic transport membrane protein" }, { "name":"BN406_05238 hypothetical protein\tK07793 tctA; putative tricarboxylic transport membrane protein" }, { "name":"BN406_05265 putative 52,8 kDa protein in TAR-I ttuC' 3'region\tK07793 tctA; putative tricarboxylic transport membrane protein" }, { "name":"BN406_05107 hypothetical protein\tK07794 tctB; putative tricarboxylic transport membrane protein" }, { "name":"BN406_05237 hypothetical protein\tK07794 tctB; putative tricarboxylic transport membrane protein" }, { "name":"BN406_05266 hypothetical protein\tK07794 tctB; putative tricarboxylic transport membrane protein" }, { "name":"BN406_05108 UPF0065 protein\tK07795 tctC; putative tricarboxylic transport membrane protein" }, { "name":"BN406_05236 hypothetical protein\tK07795 tctC; putative tricarboxylic transport membrane protein" }, { "name":"BN406_05267 hypothetical protein\tK07795 tctC; putative tricarboxylic transport membrane protein" }, { "name":"BN406_02527 hypothetical protein\tK09125 yhhQ; queuosine precursor transporter" }, { "name":"BN406_03411 hypothetical protein\tK22737 mbfA; erythrin-vacuolar iron transport family protein" }, { "name":"BN406_02000 ftsW; cell division protein FtsW\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"BN406_02734 hypothetical protein\tK08970 rcnA; nickel\/cobalt transporter (NicO) family protein" }, { "name":"BN406_04627 ABC transporter permease\tK08970 rcnA; nickel\/cobalt transporter (NicO) family protein" }, { "name":"BN406_02274 hypothetical protein\tK03832 tonB; periplasmic protein TonB" }, { "name":"BN406_02595 omp16; Outer membrane lipoprotein Omp16 homolog\tK03640 pal; peptidoglycan-associated lipoprotein" }, { "name":"BN406_02596 tolB; Protein TolB\tK03641 tolB; TolB protein" }, { "name":"BN406_00953 hppA; membrane-bound proton-translocating pyrophosphatase\tK15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]" }, { "name":"BN406_01427 cytochrome c biogenesis protein transmembrane region\tK06196 ccdA; cytochrome c-type biogenesis protein" }, { "name":"BN406_02755 secretion protein HlyD family protein\tK03543 emrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_05294 secretion protein HlyD family protein\tK03543 emrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_01768 prsE; Type I secretion system membrane fusion protein PrsE\tK12537 hasE; membrane fusion protein, type I secretion system" }, { "name":"BN406_02804 transporter\tK12537 hasE; membrane fusion protein, type I secretion system" }, { "name":"BN406_05400 prsE; Type I secretion system membrane fusion protein PrsE\tK12537 hasE; membrane fusion protein, type I secretion system" }, { "name":"BN406_05769 wgdB; HlyD family protein secretion protein\tK12537 hasE; membrane fusion protein, type I secretion system" }, { "name":"BN406_06117 hlyA; type I secretion membrane fusion protein\tK12537 hasE; membrane fusion protein, type I secretion system" }, { "name":"BN406_00835 type I secretion membrane fusion protein HlyD family\tK11003 hlyD; membrane fusion protein, hemolysin D" }, { "name":"BN406_00058 RND family efflux transporter MFP subunit\tK18901 bpeE; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_06326 RND family efflux transporter MFP subunit\tK18302 mexJ; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_01963 transporter\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_02310 transport transmembrane protein\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_03323 RND family efflux transporter MFP subunit\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_04279 nolF; Nodulation protein nolF\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_04639 bepF; Efflux pump periplasmic linker BepF\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_05369 RND family efflux transporter MFP subunit\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_01890 RND family efflux transporter MFP subunit\tK13888 macA; membrane fusion protein, macrolide-specific efflux system" }, { "name":"BN406_05583 exoP; Succinoglycan biosynthesis transport protein exoP\tK16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]" }, { "name":"BN406_06088 Cobyrinic acid ac-diamide synthase\tK00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]" }, { "name":"BN406_06087 lipopolysaccharide biosynthesis protein\tK25590 epsF; protein tyrosine kinase modulator" }, { "name":"BN406_00970 lipopolysaccharide biosynthesis protein\tK16692 etk-wzc; tyrosine-protein kinase Etk\/Wzc [EC:2.7.10.3]" }, { "name":"BN406_05548 bacA; Bacteroid development protein BacA\tK17938 sbmA; peptide\/bleomycin uptake transporter" }, { "name":"BN406_00677 cycK; cytochrome C-type biogenesis transmembrane protein\tK02198 ccmF; cytochrome c-type biogenesis protein CcmF" }, { "name":"BN406_00375 hypothetical protein\tK07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein" }, { "name":"BN406_05507 5-hydroxyisourate hydrolase 2\tK07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]" }, { "name":"BN406_05868 5-hydroxyisourate hydrolase 1\tK07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]" }, { "name":"BN406_04374 copper export protein\tK14166 ycnJ; copper transport protein" } ] }, { "name":"02044 Secretion system [BR:smi02044]", "children":[ { "name":"BN406_00834 putative toxin secretion ATP-binding ABC transporter protein\tK11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB\/CyaB" }, { "name":"BN406_00835 type I secretion membrane fusion protein HlyD family\tK11003 hlyD; membrane fusion protein, hemolysin D" }, { "name":"BN406_01245 tolC; outer membrane secretion protein\tK12340 tolC; outer membrane protein" }, { "name":"BN406_01767 prsD; Type I secretion system ATP-binding protein PrsD\tK12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease\/ATPase" }, { "name":"BN406_02803 type I secretion system ATPase\tK12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease\/ATPase" }, { "name":"BN406_05399 prsD; Type I secretion system ATP-binding protein PrsD\tK12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease\/ATPase" }, { "name":"BN406_05768 wgdA; ABC transporter ATP-binding protein\/permease\tK12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease\/ATPase" }, { "name":"BN406_06116 aprD; Alkaline protease secretion ATP-binding protein AprD\tK12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease\/ATPase" }, { "name":"BN406_01768 prsE; Type I secretion system membrane fusion protein PrsE\tK12537 hasE; membrane fusion protein, type I secretion system" }, { "name":"BN406_02804 transporter\tK12537 hasE; membrane fusion protein, type I secretion system" }, { "name":"BN406_05400 prsE; Type I secretion system membrane fusion protein PrsE\tK12537 hasE; membrane fusion protein, type I secretion system" }, { "name":"BN406_05769 wgdB; HlyD family protein secretion protein\tK12537 hasE; membrane fusion protein, type I secretion system" }, { "name":"BN406_06117 hlyA; type I secretion membrane fusion protein\tK12537 hasE; membrane fusion protein, type I secretion system" }, { "name":"BN406_03272 cpaA1; pilus assembly transmembrane protein\tK02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]" }, { "name":"BN406_04594 peptidase A24A prepilin type IV\tK02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]" }, { "name":"BN406_03273 cpaB1; pilus assembly signal peptide protein\tK02279 cpaB; pilus assembly protein CpaB" }, { "name":"BN406_04593 Flp pilus assembly protein CpaB\tK02279 cpaB; pilus assembly protein CpaB" }, { "name":"BN406_03274 cpaC1; pilus assembly transmembrane protein\tK02280 cpaC; pilus assembly protein CpaC" }, { "name":"BN406_04995 type II and III secretion system protein\tK02280 cpaC; pilus assembly protein CpaC" }, { "name":"BN406_03275 hypothetical protein\tK02281 cpaD; pilus assembly protein CpaD" }, { "name":"BN406_03276 cpaE1; response regulator protein\tK02282 cpaE; pilus assembly protein CpaE" }, { "name":"BN406_04592 cpaE2; CpaE2 pilus assembly protein\tK02282 cpaE; pilus assembly protein CpaE" }, { "name":"BN406_03277 type II secretion system protein E\tK02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]" }, { "name":"BN406_04589 cpaF2; CpaF2 pilus assembly protein\tK02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]" }, { "name":"BN406_03278 hypothetical protein\tK12510 tadB; tight adherence protein B" }, { "name":"BN406_04588 type II secretion system F domain-containing protein\tK12510 tadB; tight adherence protein B" }, { "name":"BN406_03279 hypothetical protein\tK12511 tadC; tight adherence protein C" }, { "name":"BN406_04587 type II secretion system F domain-containing protein\tK12511 tadC; tight adherence protein C" }, { "name":"BN406_03269 hypothetical protein\tK12513 tadE; tight adherence protein E" }, { "name":"BN406_04591 TadE family protein\tK12513 tadE; tight adherence protein E" }, { "name":"BN406_01584 hypothetical protein\tK27080 tadG; tight adherence protein G" }, { "name":"BN406_02479 putative membrane protein\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"BN406_03271 putative membrane protein\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"BN406_04590 putative membrane protein\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"BN406_02942 hypothetical protein\tK02221 yggT; YggT family protein" }, { "name":"BN406_00302 flhA; flagellar biosynthesis protein FlhA\tK02400 flhA; flagellar biosynthesis protein FlhA" }, { "name":"BN406_00266 flhB; flagellar biosynthesis protein FlhB\tK02401 flhB; flagellar biosynthesis protein FlhB" }, { "name":"BN406_00262 fliF; flagellar MS-ring protein\tK02409 fliF; flagellar M-ring protein FliF" }, { "name":"BN406_00273 fliI; Flagellum-specific ATP synthase\tK02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]" }, { "name":"BN406_00268 fliN; flagellar motor switch protein\tK02417 fliN; flagellar motor switch protein FliN" }, { "name":"BN406_00284 fliP; flagellar biosynthesis protein FliP\tK02419 fliP; flagellar biosynthesis protein FliP" }, { "name":"BN406_00301 fliQ; flagellar biosynthesis protein FliQ\tK02420 fliQ; flagellar biosynthesis protein FliQ" }, { "name":"BN406_00303 fliR; flagellar biosynthesis protein FliR\tK02421 fliR; flagellar biosynthesis protein FliR" }, { "name":"BN406_04445 virB1; VirB1 type IV secretion protein\tK03194 virB1; type IV secretion system protein VirB1" }, { "name":"BN406_04444 virB2; VirB2 type IV secretion protein\tK03197 virB2; type IV secretion system protein VirB2" }, { "name":"BN406_04443 virB3; VirB3 type IV secretion protein\tK03198 virB3; type IV secretion system protein VirB3" }, { "name":"BN406_04442 virB4; Type IV secretion system protein virB4\tK03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]" }, { "name":"BN406_04441 virB5; VirB5 type IV secretion protein\tK03200 virB5; type IV secretion system protein VirB5" }, { "name":"BN406_04439 virB6; VirB6 type IV secretion protein\tK03201 virB6; type IV secretion system protein VirB6" }, { "name":"BN406_04438 virB7; VirB7-like protein\tK03202 virB7; type IV secretion system protein VirB7" }, { "name":"BN406_04437 virB8; VirB8 type IV secretion protein\tK03203 virB8; type IV secretion system protein VirB8" }, { "name":"BN406_04436 virB9; Type IV secretion system protein virB9\tK03204 virB9; type IV secretion system protein VirB9" }, { "name":"BN406_04435 virB10; Type IV secretion system protein virB10\tK03195 virB10; type IV secretion system protein VirB10" }, { "name":"BN406_04434 virB11; Type IV secretion system protein VirB11\tK03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]" }, { "name":"BN406_04306 virD4; Type IV secretion system-coupling protein virD4\tK03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]" }, { "name":"BN406_06821 traG; putative conjugal transfer protein traG\tK03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]" }, { "name":"BN406_06843 trbB; putative conjugal transfer protein TrbB\tK20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]" }, { "name":"BN406_06842 putative secreted protein\tK20528 trbC; type IV secretion system protein TrbC" }, { "name":"BN406_06841 putative membrane protein\tK20529 trbD; type IV secretion system protein TrbD" }, { "name":"BN406_06840 trbE; Conjugal transfer protein trbE\tK20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]" }, { "name":"BN406_06836 trbF; putative conjugal transfer protein trbF\tK20531 trbF; type IV secretion system protein TrbF" }, { "name":"BN406_06835 trbG; putative conjugal transfer protein trbG\tK20532 trbG; type IV secretion system protein TrbG" }, { "name":"BN406_06834 trbH; putative conjugal transfer protein trbH\tK20267 trbH; type IV secretion system protein TrbH" }, { "name":"BN406_06833 trbI; putative conjugal transfer protein trbI\tK20533 trbI; type IV secretion system protein TrbI" }, { "name":"BN406_06839 trbJ; putative conjugal transfer protein trbJ\tK20266 trbJ; type IV secretion system protein TrbJ" }, { "name":"BN406_06838 putative secreted protein\tK20555 trbK; type IV secretion system protein TrbK" }, { "name":"BN406_06837 trbL; putative conjugal transfer protein trbL\tK07344 trbL; type IV secretion system protein TrbL" }, { "name":"BN406_04607 Pilus assembly chaperone\tK07346 fimC; fimbrial chaperone protein" }, { "name":"BN406_02485 secA; preprotein translocase subunit SecA\tK03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]" }, { "name":"BN406_03142 secB; preprotein translocase subunit SecB\tK03071 secB; preprotein translocase subunit SecB" }, { "name":"BN406_00204 secD2; bifunctional preprotein translocase subunit SecD\/SecF\tK12257 secDF; SecD\/SecF fusion protein" }, { "name":"BN406_01270 protein-export membrane protein SecD\tK12257 secDF; SecD\/SecF fusion protein" }, { "name":"BN406_01072 secE; preprotein translocase subunit SecE\tK03073 secE; preprotein translocase subunit SecE" }, { "name":"BN406_01171 secG; preprotein translocase subunit SecG\tK03075 secG; preprotein translocase subunit SecG" }, { "name":"BN406_01107 secY; preprotein translocase subunit SecY\tK03076 secY; preprotein translocase subunit SecY" }, { "name":"BN406_03041 ffh; Signal recognition particle protein\tK03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]" }, { "name":"BN406_03038 ftsY; Signal recognition particle receptor FtsY\tK03110 ftsY; fused signal recognition particle receptor" }, { "name":"BN406_01269 YAJC protein\tK03210 yajC; preprotein translocase subunit YajC" }, { "name":"BN406_00076 inner membrane protein translocase component YidC\tK03217 yidC; YidC\/Oxa1 family membrane protein insertase" }, { "name":"BN406_01260 tatA1; twin arginine translocase A\tK03116 tatA; sec-independent protein translocase protein TatA" }, { "name":"BN406_01261 tatB; sec-independent translocase\tK03117 tatB; sec-independent protein translocase protein TatB" }, { "name":"BN406_01262 tatC; SEC-independent translocase transmembrane protein\tK03118 tatC; sec-independent protein translocase protein TatC" } ] }, { "name":"02042 Bacterial toxins [BR:smi02042]", "children":[ { "name":"BN406_01417 UPF0053 protein\tK03699 tlyC; magnesium and cobalt exporter, CNNM family" }, { "name":"BN406_02533 hypothetical protein\tK03699 tlyC; magnesium and cobalt exporter, CNNM family" }, { "name":"BN406_00645 hypothetical protein\tK11068 hlyIII; hemolysin III" } ] }, { "name":"02022 Two-component system [BR:smi02022]", "children":[ { "name":"BN406_00142 phoR; phosphate regulon sensor histidine kinase transmembrane protein\tK07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]" }, { "name":"BN406_00148 phoB; Phosphate regulon transcriptional regulatory protein phoB\tK07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB" }, { "name":"BN406_02188 sensor histidine kinase transmembrane protein\tK07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]" }, { "name":"BN406_02187 petR; Protein PetR\tK07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR" }, { "name":"BN406_03538 KdpD histidine kinase\tK07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]" }, { "name":"BN406_03539 kdpE; Transcriptional regulatory protein KdpE\tK07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE" }, { "name":"BN406_05270 two-component sensor histidine kinase\tK07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]" }, { "name":"BN406_05269 two-component response regulator protein\tK07774 tctD; two-component system, OmpR family, response regulator TctD" }, { "name":"BN406_03177 chvG; Sensor protein ChvG\tK14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]" }, { "name":"BN406_03178 chvI; Transcriptional regulatory protein ChvI\tK14981 chvI; two-component system, OmpR family, response regulator ChvI" }, { "name":"BN406_04112 response regulator receiver protein\tK14981 chvI; two-component system, OmpR family, response regulator ChvI" }, { "name":"BN406_00294 ftcR; Flagellar transcriptional regulator ftcR\tK21603 ftcR; two-component system, OmpR family, flagellar system response regulator FtcR" }, { "name":"BN406_00672 feuP; transcription regulator protein\tK02483 K02483; two-component system, OmpR family, response regulator" }, { "name":"BN406_00680 cusR; Transcriptional regulatory protein CusR\tK02483 K02483; two-component system, OmpR family, response regulator" }, { "name":"BN406_03743 two-component response regulator\tK02483 K02483; two-component system, OmpR family, response regulator" }, { "name":"BN406_06445 ompR3; Transcriptional regulatory protein OmpR\tK02483 K02483; two-component system, OmpR family, response regulator" }, { "name":"BN406_05350 two-component response regulator protein\tK07684 narL; two-component system, NarL family, nitrate\/nitrite response regulator NarL" }, { "name":"BN406_06579 LuxR family two component transcriptional regulator\tK07684 narL; two-component system, NarL family, nitrate\/nitrite response regulator NarL" }, { "name":"BN406_05679 LytTR family two component transcriptional regulator\tK02477 K02477; two-component system, LytTR family, response regulator" }, { "name":"BN406_01190 ntrB; Nitrogen regulation protein ntrB\tK07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]" }, { "name":"BN406_01191 ntrC; Nitrogen assimilation regulatory protein\tK07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG" }, { "name":"BN406_01192 ntrY; Nitrogen regulation protein ntrY\tK13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]" }, { "name":"BN406_01193 ntrX; Nitrogen assimilation regulatory protein ntrX\tK13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX" }, { "name":"BN406_05184 dctB; C4-dicarboxylate transport sensor protein dctB\tK10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]" }, { "name":"BN406_05793 two-component sensor histidine kinase\tK10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]" }, { "name":"BN406_05183 dctD1; C4-dicarboxylate transport transcriptional regulatory protein dctD\tK10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD" }, { "name":"BN406_05794 dctD3; C4-dicarboxylate transport transcriptional regulatory protein dctD\tK10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD" }, { "name":"BN406_00255 cheA; Chemotaxis protein CheA\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"BN406_04585 Sensor histidine kinase\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"BN406_00254 cheY1; chemotaxis regulator protein\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"BN406_00259 cheY; putative chemotaxis protein CheY\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"BN406_02576 2-component receiver domain protein\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"BN406_00258 cheB1; Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"BN406_04586 cheB3; Chemotaxis response regulator protein-glutamate methylesterase of group 3 operon\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"BN406_06170 CheB methylesterase\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"BN406_06169 putative methyltransferase\tK13924 cheBR; two-component system, chemotaxis family, CheB\/CheR fusion protein [EC:2.1.1.80 3.1.1.61]" }, { "name":"BN406_00683 multi-sensor signal transduction histidine kinase\tK07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]" }, { "name":"BN406_01615 sensor histidine kinase transmembrane protein\tK07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]" }, { "name":"BN406_00658 putative sensor-like histidine kinase R01002\tK11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]" }, { "name":"BN406_01028 pleD; Response regulator PleD\tK02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]" }, { "name":"BN406_01027 divK; Polar-differentiation response regulator divK\tK11443 divK; two-component system, cell cycle response regulator DivK" }, { "name":"BN406_01536 sensor histidine kinase transmembrane protein\tK13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]" }, { "name":"BN406_02575 ctrA; Cell cycle response regulator CtrA\tK13584 ctrA; two-component system, cell cycle response regulator CtrA" }, { "name":"BN406_00091 hypothetical protein\tK13589 cpdR; two-component system, cell cycle response regulator CpdR" }, { "name":"BN406_02683 2-component receiver domain protein\tK13589 cpdR; two-component system, cell cycle response regulator CpdR" }, { "name":"BN406_03939 hypothetical protein\tK13589 cpdR; two-component system, cell cycle response regulator CpdR" }, { "name":"BN406_04920 hypothetical protein\tK13589 cpdR; two-component system, cell cycle response regulator CpdR" }, { "name":"BN406_05073 hypothetical protein\tK13589 cpdR; two-component system, cell cycle response regulator CpdR" }, { "name":"BN406_05465 hypothetical protein\tK13589 cpdR; two-component system, cell cycle response regulator CpdR" }, { "name":"BN406_04389 fixL; Sensor protein fixL\tK14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]" }, { "name":"BN406_04201 fixJ1; Transcriptional regulatory protein fixJ\tK14987 fixJ; two-component system, LuxR family, response regulator FixJ" }, { "name":"BN406_04388 fixJ3; Transcriptional regulatory protein fixJ\tK14987 fixJ; two-component system, LuxR family, response regulator FixJ" }, { "name":"BN406_03200 actS; sensor histidine kinase transmembrane protein\tK15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]" }, { "name":"BN406_03199 actR; Acid tolerance regulatory protein ActR\tK15012 regA; two-component system, response regulator RegA" }, { "name":"BN406_05957 putative nitrate transport protein\tK22067 nasS; two-component system, oxyanion-binding sensor" }, { "name":"BN406_05956 response regulator receiver and ANTAR domain-containing protein\tK07183 nasT; two-component system, response regulator \/ RNA-binding antiterminator" } ] }, { "name":"02035 Bacterial motility proteins [BR:smi02035]", "children":[ { "name":"BN406_00255 cheA; Chemotaxis protein CheA\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"BN406_04585 Sensor histidine kinase\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"BN406_00256 cheW; Chemotaxis protein CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"BN406_01974 cheW2; chemotaxis protein\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"BN406_02860 cheW3; chemotaxis protein\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"BN406_04583 CheW protein\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"BN406_00260 cheD; chemoreceptor glutamine deamidase CheD\tK03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]" }, { "name":"BN406_00257 cheRch1; putative chemotaxis protein methyltransferase\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"BN406_04582 MCP methyltransferase CheR-type\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"BN406_00258 cheB1; Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"BN406_04586 cheB3; Chemotaxis response regulator protein-glutamate methylesterase of group 3 operon\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"BN406_06170 CheB methylesterase\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"BN406_06169 putative methyltransferase\tK13924 cheBR; two-component system, chemotaxis family, CheB\/CheR fusion protein [EC:2.1.1.80 3.1.1.61]" }, { "name":"BN406_00254 cheY1; chemotaxis regulator protein\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"BN406_00259 cheY; putative chemotaxis protein CheY\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"BN406_02576 2-component receiver domain protein\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"BN406_00049 mcpX; chemoreceptor methyl-accepting chemotaxis transmembrane protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_00078 methyl-accepting chemotaxis sensory transducer\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_00252 mcpE; putative chemoreceptor mcpE\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_00324 putative chemoreceptor y4fA\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_00532 methyl-accepting chemotaxis sensory transducer with Cache sensor\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_01626 mcpV; chemoreceptor methyl-accepting chemotaxis transmembrane protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_01975 methyl-accepting chemotaxis sensory transducer\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_02861 methyl-accepting chemotaxis sensory transducer with Pas\/Pac sensor\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_04584 mcpS; Methyl-accepting chemotaxis protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"BN406_00273 fliI; Flagellum-specific ATP synthase\tK02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]" }, { "name":"BN406_00284 fliP; flagellar biosynthesis protein FliP\tK02419 fliP; flagellar biosynthesis protein FliP" }, { "name":"BN406_00301 fliQ; flagellar biosynthesis protein FliQ\tK02420 fliQ; flagellar biosynthesis protein FliQ" }, { "name":"BN406_00303 fliR; flagellar biosynthesis protein FliR\tK02421 fliR; flagellar biosynthesis protein FliR" }, { "name":"BN406_00302 flhA; flagellar biosynthesis protein FlhA\tK02400 flhA; flagellar biosynthesis protein FlhA" }, { "name":"BN406_00266 flhB; flagellar biosynthesis protein FlhB\tK02401 flhB; flagellar biosynthesis protein FlhB" }, { "name":"BN406_00267 fliG; flagellar motor switch protein G\tK02410 fliG; flagellar motor switch protein FliG" }, { "name":"BN406_00269 fliM; flagellar motor switch transmembrane protein\tK02416 fliM; flagellar motor switch protein FliM" }, { "name":"BN406_00268 fliN; flagellar motor switch protein\tK02417 fliN; flagellar motor switch protein FliN" }, { "name":"BN406_00262 fliF; flagellar MS-ring protein\tK02409 fliF; flagellar M-ring protein FliF" }, { "name":"BN406_00280 flgI; flagellar basal body P-ring protein\tK02394 flgI; flagellar P-ring protein FlgI" }, { "name":"BN406_00279 flgA; flagellar basal body P-ring biosynthesis protein FlgA\tK02386 flgA; flagellar basal body P-ring formation protein FlgA" }, { "name":"BN406_00282 flgH; flagellar basal body L-ring protein\tK02393 flgH; flagellar L-ring protein FlgH" }, { "name":"BN406_00283 fliL; flagellar transmembrane protein\tK02415 fliL; flagellar protein FliL" }, { "name":"BN406_00277 fliE; flagellar hook-basal body protein FliE\tK02408 fliE; flagellar hook-basal body complex protein FliE" }, { "name":"BN406_00275 flgB; flagellar basal body rod protein FlgB\tK02387 flgB; flagellar basal-body rod protein FlgB" }, { "name":"BN406_00276 flgC; Flagellar basal-body rod protein flgC\tK02388 flgC; flagellar basal-body rod protein FlgC" }, { "name":"BN406_00300 flgD; flagellar basal body rod modification protein\tK02389 flgD; flagellar basal-body rod modification protein FlgD" }, { "name":"BN406_00272 flgF; Flagellar basal-body rod protein flgF\tK02391 flgF; flagellar basal-body rod protein FlgF" }, { "name":"BN406_00278 flgG; Flagellar basal-body rod protein flgG\tK02392 flgG; flagellar basal-body rod protein FlgG" }, { "name":"BN406_00305 hypothetical protein\tK02395 flgJ; peptidoglycan hydrolase FlgJ" }, { "name":"BN406_00295 flgE; Flagellar hook protein flgE\tK02390 flgE; flagellar hook protein FlgE" }, { "name":"BN406_00296 flgK; flagellar hook-associated protein FlgK\tK02396 flgK; flagellar hook-associated protein 1" }, { "name":"BN406_00297 flgL; flagellar hook-associated protein FlgL\tK02397 flgL; flagellar hook-associated protein 3 FlgL" }, { "name":"BN406_00285 flaA; Flagellin A\tK02406 fliC; flagellin" }, { "name":"BN406_00286 flaB; Flagellin B\tK02406 fliC; flagellin" }, { "name":"BN406_00287 flaD; Flagellin D\tK02406 fliC; flagellin" }, { "name":"BN406_00288 flaC; Flagellin C\tK02406 fliC; flagellin" }, { "name":"BN406_00270 motA; flagellar motor protein MotA\tK02556 motA; chemotaxis protein MotA" }, { "name":"BN406_00290 motB; flagellar motor protein MotB\tK02557 motB; chemotaxis protein MotB" }, { "name":"BN406_00291 motC; chemotaxis protein\tK10564 motC; chemotaxis protein MotC" }, { "name":"BN406_00292 motD; chemotaxis protein (motility protein D)\tK10565 motD; chemotaxis protein MotD" }, { "name":"BN406_03074 putative amino-acid ABC transporter-binding protein HI_1080\tK02424 tcyA; L-cystine transport system substrate-binding protein" }, { "name":"BN406_00298 flaF; flagellar biosynthesis regulatory protein FlaF\tK06602 flaF; flagellar biosynthesis activator protein FlaF" }, { "name":"BN406_00299 flbT; flagellar biosynthesis repressor FlbT\tK06601 flbT; flagellar biosynthesis repressor protein FlbT" }, { "name":"BN406_02479 putative membrane protein\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"BN406_03271 putative membrane protein\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"BN406_04590 putative membrane protein\tK02651 flp; pilus assembly protein Flp\/PilA" }, { "name":"BN406_03272 cpaA1; pilus assembly transmembrane protein\tK02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]" }, { "name":"BN406_04594 peptidase A24A prepilin type IV\tK02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]" }, { "name":"BN406_03273 cpaB1; pilus assembly signal peptide protein\tK02279 cpaB; pilus assembly protein CpaB" }, { "name":"BN406_04593 Flp pilus assembly protein CpaB\tK02279 cpaB; pilus assembly protein CpaB" }, { "name":"BN406_03274 cpaC1; pilus assembly transmembrane protein\tK02280 cpaC; pilus assembly protein CpaC" }, { "name":"BN406_04995 type II and III secretion system protein\tK02280 cpaC; pilus assembly protein CpaC" }, { "name":"BN406_03275 hypothetical protein\tK02281 cpaD; pilus assembly protein CpaD" }, { "name":"BN406_03276 cpaE1; response regulator protein\tK02282 cpaE; pilus assembly protein CpaE" }, { "name":"BN406_04592 cpaE2; CpaE2 pilus assembly protein\tK02282 cpaE; pilus assembly protein CpaE" }, { "name":"BN406_03277 type II secretion system protein E\tK02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]" }, { "name":"BN406_04589 cpaF2; CpaF2 pilus assembly protein\tK02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]" }, { "name":"BN406_04607 Pilus assembly chaperone\tK07346 fimC; fimbrial chaperone protein" } ] }, { "name":"03037 Cilium and associated proteins" }, { "name":"04812 Cytoskeleton proteins [BR:smi04812]", "children":[ { "name":"BN406_01870 ftsZ2; Cell division protein FtsZ 2\tK03531 ftsZ; cell division protein FtsZ" }, { "name":"BN406_01991 ftsZ1; Cell division protein FtsZ 1\tK03531 ftsZ; cell division protein FtsZ" }, { "name":"BN406_01992 ftsA; Cell division protein FtsA\tK03590 ftsA; cell division protein FtsA" }, { "name":"BN406_05346 minC; septum formation inhibitor\tK03610 minC; septum site-determining protein MinC" }, { "name":"BN406_05347 minD; Septum site-determining protein MinD\tK03609 minD; septum site-determining protein MinD" }, { "name":"BN406_05348 minE; cell division topological specificity factor MinE\tK03608 minE; cell division topological specificity factor" }, { "name":"BN406_02034 hypothetical protein\tK03496 parA; chromosome partitioning protein" }, { "name":"BN406_03130 parA; Chromosome partitioning protein ParA\tK03496 parA; chromosome partitioning protein" }, { "name":"BN406_03500 Putative replication protein A\tK03496 parA; chromosome partitioning protein" }, { "name":"BN406_05089 repA1; Putative replication protein A\tK03496 parA; chromosome partitioning protein" }, { "name":"BN406_05198 repA3; Putative replication protein A\tK03496 parA; chromosome partitioning protein" }, { "name":"BN406_06608 Putative replication protein A\tK03496 parA; chromosome partitioning protein" }, { "name":"BN406_03129 parB; Chromosome-partitioning protein parB\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"BN406_03501 plasmid partitioning protein RepB\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"BN406_05090 plasmid partitioning protein RepB\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"BN406_05197 plasmid partitioning protein RepB\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"BN406_06609 repB; replication protein B\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"BN406_06810 plasmid partitioning protein\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" } ] }, { "name":"04147 Exosome [BR:smi04147]", "children":[ { "name":"BN406_05809 htpG; molecular chaperone HtpG\tK04079 HSP90A; molecular chaperone HtpG" }, { "name":"BN406_02625 fbaB; fructose-bisphosphate aldolase class I protein\tK01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]" }, { "name":"BN406_06665 fda; Fructose-bisphosphate aldolase class 1\tK01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]" }, { "name":"BN406_01175 eno; phosphopyruvate hydratase\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]" }, { "name":"BN406_02621 gap; glyceraldehyde-3-phosphate dehydrogenase\tK00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]" }, { "name":"BN406_02623 pgk; phosphoglycerate kinase\tK00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]" }, { "name":"BN406_02647 pykA; pyruvate kinase\tK00873 PK; pyruvate kinase [EC:2.7.1.40]" }, { "name":"BN406_02263 putative dipeptidase protein\tK01273 DPEP; membrane dipeptidase [EC:3.4.13.19]" }, { "name":"BN406_06288 peptidase M19\tK01273 DPEP; membrane dipeptidase [EC:3.4.13.19]" }, { "name":"BN406_00448 groL1; 60 kDa chaperonin 1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_00931 groL2; 60 kDa chaperonin 2\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_04188 groL1; 60 kDa chaperonin 1\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_04784 groL6; 60 kDa chaperonin 6\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_05019 groL3; 60 kDa chaperonin 3\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_05660 groL5; 60 kDa chaperonin 5\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"BN406_03312 dnaK; Chaperone protein DnaK\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"BN406_00131 pgi; glucose-6-phosphate isomerase\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]" }, { "name":"BN406_04976 gluconolactonase\tK01053 gnl; gluconolactonase [EC:3.1.1.17]" }, { "name":"BN406_06225 putative gluconolactonase precursor protein\tK01053 gnl; gluconolactonase [EC:3.1.1.17]" }, { "name":"BN406_00417 guaB; Inosine-5'-monophosphate dehydrogenase\tK00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]" }, { "name":"BN406_01069 tuf1; Elongation factor Tu\tK02358 tuf; elongation factor Tu" }, { "name":"BN406_01085 tuf1; Elongation factor Tu\tK02358 tuf; elongation factor Tu" }, { "name":"BN406_01222 hypothetical protein\tK02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]" }, { "name":"BN406_02671 hypothetical protein\tK14347 SLC10A7; solute carrier family 10 (sodium\/bile acid cotransporter), member 7" }, { "name":"BN406_00132 fadD; Long-chain-fatty-acid--CoA ligase\tK01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]" }, { "name":"BN406_00166 fadA; Putative acyltransferase Rv0859\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_00541 vraB; Putative acetyl-CoA C-acetyltransferase vraB\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_01442 acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_03063 phbA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_04528 thlA; Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"BN406_03173 ahcY; S-adenosyl-L-homocysteine hydrolase\tK01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]" }, { "name":"BN406_01108 adk; Adenylate kinase\tK00939 adk; adenylate kinase [EC:2.7.4.3]" }, { "name":"BN406_02211 apt; adenine phosphoribosyltransferase\tK00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]" }, { "name":"BN406_02505 argH1; Argininosuccinate lyase 1\tK01755 argH; argininosuccinate lyase [EC:4.3.2.1]" }, { "name":"BN406_05976 argH2; Argininosuccinate lyase 2\tK01755 argH; argininosuccinate lyase [EC:4.3.2.1]" }, { "name":"BN406_03010 argG; Argininosuccinate synthase\tK01940 argG; argininosuccinate synthase [EC:6.3.4.5]" }, { "name":"BN406_05850 NG,NG-dimethylarginine dimethylaminohydrolase (dimethylargininase) protein\tK01482 DDAH; dimethylargininase [EC:3.5.3.18]" }, { "name":"BN406_02303 dht; D-hydantoinase\/dihydropyrimidinase\tK01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]" }, { "name":"BN406_06461 cbbF; fructose-1,6-bisphosphatase\tK03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]" }, { "name":"BN406_02700 glgB; 1,4-alpha-glucan branching enzyme GlgB\tK00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]" }, { "name":"BN406_05537 glpK; Glycerol kinase\tK00864 glpK; glycerol kinase [EC:2.7.1.30]" }, { "name":"BN406_06670 glpK2; Glycerol kinase 2\tK00864 glpK; glycerol kinase [EC:2.7.1.30]" }, { "name":"BN406_00321 glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_01379 glnA; Glutamine synthetase 1\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_02037 hypothetical protein\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_02355 glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_02429 glutamine synthetase\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_03224 glnT; Glutamine synthetase 3\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_05261 glnII; Glutamine synthetase 2\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"BN406_00939 hemB; delta-aminolevulinic acid dehydratase\tK01698 hemB; porphobilinogen synthase [EC:4.2.1.24]" }, { "name":"BN406_02799 vllY; Hemolysin VllY\tK00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]" }, { "name":"BN406_03018 phhB; pterin-4-alpha-carbinolamine dehydratase\tK01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]" }, { "name":"BN406_02058 oxidoreductase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"BN406_02405 oxidoreductase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"BN406_02587 serA; D-3-phosphoglycerate dehydrogenase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"BN406_04465 glyoxylate reductase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"BN406_06742 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"BN406_03117 purH; bifunctionalphosphoribosylaminoimidazolecarboxam ide formyltransferase\/IMP cyclohydrolase\tK00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase \/ IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]" }, { "name":"BN406_01183 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02792 lpdV; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02904 LPD2; Dihydrolipoyl dehydrogenase 2, mitochondrial\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_06654 lpdA; Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"BN406_02502 etfA; Electron transfer flavoprotein subunit alpha\tK03522 fixB; electron transfer flavoprotein alpha subunit" }, { "name":"BN406_04233 fixB; Protein fixB\tK03522 fixB; electron transfer flavoprotein alpha subunit" }, { "name":"BN406_04496 etfA; Electron transfer flavoprotein subunit alpha\tK03522 fixB; electron transfer flavoprotein alpha subunit" }, { "name":"BN406_06755 etfA; Electron transfer flavoprotein subunit alpha\tK03522 fixB; electron transfer flavoprotein alpha subunit" }, { "name":"BN406_00319 zwf; glucose-6-phosphate 1-dehydrogenase\tK00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]" }, { "name":"BN406_01170 tpiA1; Triosephosphate isomerase 1\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]" }, { "name":"BN406_06677 tpiA; Triosephosphate isomerase\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]" }, { "name":"BN406_03295 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase\tK01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]" }, { "name":"BN406_01806 lipocalin family protein\tK03098 APOD; apolipoprotein D and lipocalin family protein" } ] }, { "name":"02048 Prokaryotic defense system [BR:smi02048]", "children":[ { "name":"BN406_00582 smeIM; Modification methylase SmeI\tK13581 ccrM; modification methylase [EC:2.1.1.72]" }, { "name":"BN406_01206 unnamed protein product\tK18923 stbD; antitoxin StbD" }, { "name":"BN406_03883 unnamed protein product\tK07473 dinJ; DNA-damage-inducible protein J" }, { "name":"BN406_04717 hypothetical protein\tK07473 dinJ; DNA-damage-inducible protein J" }, { "name":"BN406_03400 hypothetical protein\tK19164 ccdA; antitoxin CcdA" }, { "name":"BN406_02536 hypothetical protein\tK19092 parE1_3_4; toxin ParE1\/3\/4" }, { "name":"BN406_03843 plasmid stabilization system\tK19092 parE1_3_4; toxin ParE1\/3\/4" }, { "name":"BN406_06537 plasmid stabilization system\tK19092 parE1_3_4; toxin ParE1\/3\/4" }, { "name":"BN406_06594 hypothetical protein\tK19092 parE1_3_4; toxin ParE1\/3\/4" }, { "name":"BN406_01697 hypothetical protein\tK07746 parD1_3_4; antitoxin ParD1\/3\/4" }, { "name":"BN406_02537 hypothetical protein\tK07746 parD1_3_4; antitoxin ParD1\/3\/4" }, { "name":"BN406_04508 unnamed protein product\tK07746 parD1_3_4; antitoxin ParD1\/3\/4" }, { "name":"BN406_06536 hypothetical protein\tK07746 parD1_3_4; antitoxin ParD1\/3\/4" }, { "name":"BN406_06595 unnamed protein product\tK07746 parD1_3_4; antitoxin ParD1\/3\/4" }, { "name":"BN406_00424 hypothetical protein\tK19166 higB; mRNA interferase HigB [EC:3.1.-.-]" }, { "name":"BN406_04345 hypothetical protein\tK19166 higB; mRNA interferase HigB [EC:3.1.-.-]" }, { "name":"BN406_00787 hypothetical protein\tK07334 higB-1; toxin HigB-1" }, { "name":"BN406_02915 unnamed protein product\tK07334 higB-1; toxin HigB-1" }, { "name":"BN406_00425 hypothetical protein\tK18831 higA; HTH-type transcriptional regulator \/ antitoxin HigA" }, { "name":"BN406_04344 putative transcription regulator protein\tK18831 higA; HTH-type transcriptional regulator \/ antitoxin HigA" }, { "name":"BN406_00786 hypothetical protein\tK21498 higA-1; antitoxin HigA-1" }, { "name":"BN406_02914 hypothetical protein\tK21498 higA-1; antitoxin HigA-1" }, { "name":"BN406_02267 ntrR1; nitrogen regulatory protein\tK18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]" }, { "name":"BN406_02543 PilT protein domain-containing protein\tK18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]" }, { "name":"BN406_03109 virulence associated protein\tK18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]" }, { "name":"BN406_04347 PilT protein domain-containing protein\tK18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]" }, { "name":"BN406_02266 hypothetical protein\tK18829 mvpT; antitoxin VapB" }, { "name":"BN406_02544 hypothetical protein\tK18829 mvpT; antitoxin VapB" }, { "name":"BN406_03110 hypothetical protein\tK18829 mvpT; antitoxin VapB" }, { "name":"BN406_04348 hypothetical protein\tK18829 mvpT; antitoxin VapB" }, { "name":"BN406_05790 unnamed protein product\tK28280 vapB22; antitoxin VapB22" }, { "name":"BN406_06261 PIN domain-containing protein family protein\tK28143 vapC24S; ribonuclease VapC24\/25\/29\/31\/33\/37\/38\/39\/41\/43\/44\/48 [EC:3.1.-.-]" }, { "name":"BN406_06260 unnamed protein product\tK28144 vapB24S; antitoxin VapB24\/25\/29\/31\/33\/37\/38\/39\/41\/43\/44\/48" }, { "name":"BN406_00334 PilT protein domain-containing protein\tK19686 vapC28S; ribonuclease VapC28\/30\/34\/36\/42 [EC:3.1.-.-]" }, { "name":"BN406_00460 hypothetical protein\tK19686 vapC28S; ribonuclease VapC28\/30\/34\/36\/42 [EC:3.1.-.-]" }, { "name":"BN406_02228 putative VapC ribonuclease R02377\tK19686 vapC28S; ribonuclease VapC28\/30\/34\/36\/42 [EC:3.1.-.-]" }, { "name":"BN406_02735 hypothetical protein\tK19686 vapC28S; ribonuclease VapC28\/30\/34\/36\/42 [EC:3.1.-.-]" }, { "name":"BN406_00333 unnamed protein product\tK19687 vapB28S; antitoxin VapB28\/30\/34\/36\/42" }, { "name":"BN406_00461 hypothetical protein\tK19687 vapB28S; antitoxin VapB28\/30\/34\/36\/42" }, { "name":"BN406_02229 unnamed protein product\tK19687 vapB28S; antitoxin VapB28\/30\/34\/36\/42" }, { "name":"BN406_02736 hypothetical protein\tK19687 vapB28S; antitoxin VapB28\/30\/34\/36\/42" }, { "name":"BN406_05166 hypothetical protein\tK19687 vapB28S; antitoxin VapB28\/30\/34\/36\/42" }, { "name":"BN406_01870 ftsZ2; Cell division protein FtsZ 2\tK03531 ftsZ; cell division protein FtsZ" }, { "name":"BN406_01991 ftsZ1; Cell division protein FtsZ 1\tK03531 ftsZ; cell division protein FtsZ" }, { "name":"BN406_00934 parC; DNA topoisomerase 4 subunit A\tK02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]" }, { "name":"BN406_01165 gyrB1; DNA gyrase subunit B\tK02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]" }, { "name":"BN406_02759 gltX; Glutamate--tRNA ligase\tK01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]" }, { "name":"BN406_01404 hypothetical protein\tK09159 cptB; antitoxin CptB" }, { "name":"BN406_01478 nifS; pyridoxal-phosphate-dependent aminotransferase\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]" } ] }, { "name":"04030 G protein-coupled receptors" }, { "name":"04050 Cytokine receptors" }, { "name":"04054 Pattern recognition receptors" }, { "name":"03310 Nuclear receptors" }, { "name":"04040 Ion channels [BR:smi04040]" }, { "name":"04031 GTP-binding proteins" }, { "name":"04052 Cytokines and neuropeptides" }, { "name":"04515 Cell adhesion molecules" }, { "name":"04090 CD molecules [BR:smi04090]" }, { "name":"01504 Antimicrobial resistance genes [BR:smi01504]", "children":[ { "name":"BN406_03656 aacC3; Aminoglycoside N(3')-acetyltransferase III\tK19275 aac3-II; aminoglycoside 3-N-acetyltransferase II [EC:2.3.1.81]" }, { "name":"BN406_02113 aacC4; Aminoglycoside N(3')-acetyltransferase IV\tK00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]" }, { "name":"BN406_03191 N-acetyltransferase GCN5\tK00663 aacA; aminoglycoside 6'-N-acetyltransferase [EC:2.3.1.82]" }, { "name":"BN406_02856 neo; Aminoglycoside 3'-phosphotransferase\tK19300 aph3-II; aminoglycoside 3'-phosphotransferase II [EC:2.7.1.95]" }, { "name":"BN406_01296 antibiotic resistance (kinase) protein\tK04343 strB; streptomycin 6-kinase [EC:2.7.1.72]" }, { "name":"BN406_01312 major facilitator superfamily protein\tK08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein" }, { "name":"BN406_00972 chloramphenicol O-acetyltransferase\tK18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]" }, { "name":"BN406_05432 putative acetyltransferase protein\tK18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]" }, { "name":"BN406_02486 cmlA; Chloramphenicol resistance protein\tK18552 cmlA; MFS transporter, DHA1 family, chloramphenicol\/florfenicol resistance protein" }, { "name":"BN406_01719 chloramphenicol phosphotransferase\tK18554 cpt; chloramphenicol 3-O phosphotransferase [EC:2.7.1.-]" }, { "name":"BN406_04957 major facilitator superfamily protein\tK08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein" }, { "name":"BN406_04982 major facilitator superfamily protein\tK08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein" }, { "name":"BN406_00637 blaP; Beta-lactamase\tK17836 penP; beta-lactamase class A [EC:3.5.2.6]" }, { "name":"BN406_02386 putative beta-lactamase protein\tK17836 penP; beta-lactamase class A [EC:3.5.2.6]" }, { "name":"BN406_04841 blaP; Beta-lactamase\tK17836 penP; beta-lactamase class A [EC:3.5.2.6]" }, { "name":"BN406_04842 beta-lactamase\tK17836 penP; beta-lactamase class A [EC:3.5.2.6]" }, { "name":"BN406_00915 Lysylphosphatidylglycerol synthetase\tK14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]" }, { "name":"BN406_01963 transporter\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_02310 transport transmembrane protein\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_03323 RND family efflux transporter MFP subunit\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_04279 nolF; Nodulation protein nolF\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_04639 bepF; Efflux pump periplasmic linker BepF\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_05369 RND family efflux transporter MFP subunit\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_01962 transport transmembrane protein\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_02311 transport transmembrane protein\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_03322 acrB; Acriflavine resistance protein B\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_04278 nolG; Nodulation protein nolG\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_04638 bepG; Efflux pump membrane transporter BepG\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_05368 bepG; Efflux pump membrane transporter BepG\tK18138 acrB; multidrug efflux pump" }, { "name":"BN406_06326 RND family efflux transporter MFP subunit\tK18302 mexJ; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_05646 hmrR2; Heavy metal-dependent transcription regulator 2\tK19591 cueR; MerR family transcriptional regulator, copper efflux regulator" }, { "name":"BN406_01245 tolC; outer membrane secretion protein\tK12340 tolC; outer membrane protein" }, { "name":"BN406_00060 LysR family transcriptional regulator\tK18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC" }, { "name":"BN406_04356 LysR family transcriptional regulator\tK18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC" }, { "name":"BN406_06190 transcriptional regulator protein\tK18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC" }, { "name":"BN406_00058 RND family efflux transporter MFP subunit\tK18901 bpeE; membrane fusion protein, multidrug efflux system" }, { "name":"BN406_00057 bepE1; Efflux pump membrane transporter BepE\tK18902 bpeF; multidrug efflux pump" } ] }, { "name":"00535 Proteoglycans" }, { "name":"00536 Glycosaminoglycan binding proteins [BR:smi00536]", "children":[ { "name":"BN406_00330 fhaB; putative filamentous hemagglutinin family protein\tK15125 fhaB; filamentous hemagglutinin" } ] }, { "name":"00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:smi00537]", "children":[ { "name":"BN406_02263 putative dipeptidase protein\tK01273 DPEP; membrane dipeptidase [EC:3.4.13.19]" }, { "name":"BN406_06288 peptidase M19\tK01273 DPEP; membrane dipeptidase [EC:3.4.13.19]" } ] }, { "name":"04091 Lectins" }, { "name":"04990 Domain-containing proteins not elsewhere classified" } ] }, { "name":"09185 Viral protein families", "children":[ { "name":"03200 Viral proteins" }, { "name":"03210 Viral fusion proteins" } ] }, { "name":"09184 RNA family", "children":[ { "name":"03100 Non-coding RNAs [BR:smi03100]", "children":[ { "name":"BN406_RNA00023 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"BN406_RNA00040 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"BN406_RNA00049 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"BN406_RNA00057 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"BN406_RNA00062 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"BN406_RNA00001 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"BN406_RNA00028 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"BN406_RNA00052 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"BN406_RNA00065 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"BN406_RNA00025 tRNA-Asn\tK14220 tRNA-Asn; tRNA Asn" }, { "name":"BN406_RNA00014 tRNA-Asp\tK14221 tRNA-Asp; tRNA Asp" }, { "name":"BN406_RNA00015 tRNA-Asp\tK14221 tRNA-Asp; tRNA Asp" }, { "name":"BN406_RNA00024 tRNA-Cys\tK14222 tRNA-Cys; tRNA Cys" }, { "name":"BN406_RNA00007 tRNA-Gln\tK14223 tRNA-Gln; tRNA Gln" }, { "name":"BN406_RNA00008 tRNA-Gln\tK14223 tRNA-Gln; tRNA Gln" }, { "name":"BN406_RNA00030 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"BN406_RNA00031 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"BN406_RNA00032 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"BN406_RNA00033 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"BN406_RNA00003 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"BN406_RNA00018 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"BN406_RNA00054 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"BN406_RNA00006 tRNA-His\tK14226 tRNA-His; tRNA His" }, { "name":"BN406_RNA00041 tRNA-Ile\tK14227 tRNA-Ile; tRNA Ile" }, { "name":"BN406_RNA00050 tRNA-Ile\tK14227 tRNA-Ile; tRNA Ile" }, { "name":"BN406_RNA00056 tRNA-Ile\tK14227 tRNA-Ile; tRNA Ile" }, { "name":"BN406_RNA00020 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"BN406_RNA00021 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"BN406_RNA00026 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"BN406_RNA00043 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"BN406_RNA00063 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"BN406_RNA00027 tRNA-Lys\tK14229 tRNA-Lys; tRNA Lys" }, { "name":"BN406_RNA00035 tRNA-Lys\tK14229 tRNA-Lys; tRNA Lys" }, { "name":"BN406_RNA00010 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"BN406_RNA00034 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"BN406_RNA00036 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"BN406_RNA00037 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"BN406_RNA00044 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"BN406_RNA00046 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"BN406_RNA00060 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"BN406_RNA00005 tRNA-Phe\tK14231 tRNA-Phe; tRNA Phe" }, { "name":"BN406_RNA00009 tRNA-Pro\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"BN406_RNA00012 tRNA-Pro\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"BN406_RNA00029 tRNA-Pro\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"BN406_RNA00011 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"BN406_RNA00022 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"BN406_RNA00053 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"BN406_RNA00061 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"BN406_RNA00002 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"BN406_RNA00004 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"BN406_RNA00016 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"BN406_RNA00019 tRNA-Trp\tK14235 tRNA-Trp; tRNA Trp" }, { "name":"BN406_RNA00017 tRNA-Tyr\tK14236 tRNA-Tyr; tRNA Tyr" }, { "name":"BN406_RNA00013 tRNA-Val\tK14237 tRNA-Val; tRNA Val" }, { "name":"BN406_RNA00045 tRNA-Val\tK14237 tRNA-Val; tRNA Val" }, { "name":"BN406_RNA00042 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"BN406_RNA00051 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"BN406_RNA00055 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"BN406_RNA00039 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"BN406_RNA00048 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"BN406_RNA00058 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"BN406_RNA00038 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"BN406_RNA00047 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"BN406_RNA00059 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" } ] } ] } ] }, { "name":"09190 Not Included in Pathway or Brite", "children":[ { "name":"09191 Unclassified: metabolism", "children":[ { "name":"99980 Enzymes with EC numbers", "children":[ { "name":"BN406_03903 gno; Gluconate 5-dehydrogenase\tK00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]" }, { "name":"BN406_05256 dehydrogenase\tK00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]" }, { "name":"BN406_05301 gno; Gluconate 5-dehydrogenase\tK00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]" }, { "name":"BN406_02074 lcdH; L-carnitine dehydrogenase\tK27497 K27497; carnitine 3-dehydrogenase \/ betainyl-CoA thioesterase [EC:1.1.1.108 3.1.2.33]" }, { "name":"BN406_03902 idnD; L-idonate 5-dehydrogenase\tK00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264]" }, { "name":"BN406_06233 zinc-binding dehydrogenase\tK00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264]" }, { "name":"BN406_03101 afr; 1,5-anhydro-D-fructose reductase\tK19181 afr; 1,5-anhydro-D-fructose reductase (1,5-anhydro-D-mannitol-forming) [EC:1.1.1.292]" }, { "name":"BN406_00623 dkgB; 2,5-diketo-D-gluconic acid reductase B\tK06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]" }, { "name":"BN406_04506 2,5-didehydrogluconate reductase\tK06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]" }, { "name":"BN406_02056 glpD1; Glycerol-3-phosphate dehydrogenase\tK21054 eryB; D-erythritol 1-phosphate dehydrogenase [EC:1.1.1.402]" }, { "name":"BN406_06512 pdxA2; 4-hydroxythreonine-4-phosphate dehydrogenase 2\tK22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase \/ 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]" }, { "name":"BN406_04948 NAD-dependent epimerase\/dehydratase\tK22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]" }, { "name":"BN406_05329 putative protein HI_1014\tK22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]" }, { "name":"BN406_05324 putative oxidoreductase HI_1010\tK08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]" }, { "name":"BN406_06319 oxidoreductase\tK23244 apsD; D-apiose dehydrogenase [EC:1.1.1.420]" }, { "name":"BN406_06324 hypothetical protein\tK23245 apnO; D-apionate oxidoisomerase [EC:1.1.1.421]" }, { "name":"BN406_06768 hypothetical protein\tK24995 E1.1.1.425; levoglucosan dehydrogenase [EC:1.1.1.425]" }, { "name":"BN406_01650 gpr; L-glyceraldehyde 3-phosphate reductase\tK19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]" }, { "name":"BN406_06651 acoA1; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha\tK21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]" }, { "name":"BN406_06764 acoA3; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha\tK21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]" }, { "name":"BN406_06772 acoA5; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha\tK21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]" }, { "name":"BN406_06652 PDH2; Pyruvate dehydrogenase E1 component subunit beta, mitochondrial\tK21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]" }, { "name":"BN406_06765 acoB1; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta\tK21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]" }, { "name":"BN406_06773 acoB3; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta\tK21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]" }, { "name":"BN406_02178 hypothetical protein\tK21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]" }, { "name":"BN406_06364 yliI; Soluble aldose sugar dehydrogenase yliI\tK21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]" }, { "name":"BN406_03091 L-sorbose 1-dehydrogenase\tK29069 sdh; L-sorbose 1-dehydrogenase [EC:1.1.99.32]" }, { "name":"BN406_04509 L-sorbose 1-dehydrogenase\tK29069 sdh; L-sorbose 1-dehydrogenase [EC:1.1.99.32]" }, { "name":"BN406_04000 ALD4; Potassium-activated aldehyde dehydrogenase, mitochondrial\tK23463 tgnC; (Z)-2-((N-methylformamido)methylene)-5-hydroxybutyrolactone dehydrogenase [EC:1.2.1.-]" }, { "name":"BN406_04218 ALDH1; Aldehyde dehydrogenase, cytosolic 1\tK23463 tgnC; (Z)-2-((N-methylformamido)methylene)-5-hydroxybutyrolactone dehydrogenase [EC:1.2.1.-]" }, { "name":"BN406_02848 carbon monoxide dehydrogenase small subunit protein\tK03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]" }, { "name":"BN406_04918 oxidoreductase\tK03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]" }, { "name":"BN406_06527 oxidoreductase\tK03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]" }, { "name":"BN406_02846 carbon monoxide dehydrogenase medium subunit transmembrane protein\tK03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]" }, { "name":"BN406_06528 probabable oxidoreductase\tK03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]" }, { "name":"BN406_02847 carbon monoxide dehydrogenase large subunit transmembrane protein\tK03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]" }, { "name":"BN406_03098 L-sorbosone dehydrogenase, NADP dependent protein\tK29070 sndh; L-sorbosone 1-dehydrogenase [EC:1.2.99.-]" }, { "name":"BN406_04510 Betaine-aldehyde dehydrogenase\tK29070 sndh; L-sorbosone 1-dehydrogenase [EC:1.2.99.-]" }, { "name":"BN406_06458 pqqC; pyrroloquinoline quinone biosynthesis protein PqqC\tK06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]" }, { "name":"BN406_04548 Isoquinoline 1-oxidoreductase\tK07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]" }, { "name":"BN406_06329 putative isoquinoline 1-oxidoreductase\tK07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]" }, { "name":"BN406_04547 Isoquinoline 1-oxidoreductase\tK07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]" }, { "name":"BN406_06330 Aldehyde dehydrogenase (pyrroloquinoline-quinone)\tK07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]" }, { "name":"BN406_06379 hypothetical protein\tK04940 odh; opine dehydrogenase [EC:1.5.1.28]" }, { "name":"BN406_01390 hypothetical protein\tK06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]" }, { "name":"BN406_03604 coenzyme F420-dependent NADP oxidoreductase\tK06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]" }, { "name":"BN406_03733 hypothetical protein\tK06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]" }, { "name":"BN406_05656 stcD; putative N-methylproline demethylase\tK22551 hpbA; N-methyl-L-proline demethylase [EC:1.5.3.-]" }, { "name":"BN406_00692 Electron transfer flavoprotein-ubiquinone oxidoreductase\tK00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]" }, { "name":"BN406_04232 fixC; Protein fixC\tK00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]" }, { "name":"BN406_01423 qor; Quinone oxidoreductase\tK00344 qor; NADPH:quinone reductase [EC:1.6.5.5]" }, { "name":"BN406_03508 NADPH:quinone reductase\tK00344 qor; NADPH:quinone reductase [EC:1.6.5.5]" }, { "name":"BN406_03721 alcohol dehydrogenase zinc-binding domain-containing protein\tK00344 qor; NADPH:quinone reductase [EC:1.6.5.5]" }, { "name":"BN406_03732 qor1; quinone oxidoreductase\tK00344 qor; NADPH:quinone reductase [EC:1.6.5.5]" }, { "name":"BN406_03736 unnamed protein product\tK00344 qor; NADPH:quinone reductase [EC:1.6.5.5]" }, { "name":"BN406_04108 NADPH:quinone reductase\tK00344 qor; NADPH:quinone reductase [EC:1.6.5.5]" }, { "name":"BN406_04120 NADPH:quinone reductase\tK00344 qor; NADPH:quinone reductase [EC:1.6.5.5]" }, { "name":"BN406_05863 NADPH quinone oxidoreductase\tK00344 qor; NADPH:quinone reductase [EC:1.6.5.5]" }, { "name":"BN406_06284 NADPH:quinone reductase\tK00344 qor; NADPH:quinone reductase [EC:1.6.5.5]" }, { "name":"BN406_01066 azoR; FMN-dependent NADH-azoreductase\tK01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]" }, { "name":"BN406_02924 msrA2; Peptide methionine sulfoxide reductase MsrA 2\tK07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]" }, { "name":"BN406_03340 msrA1; Peptide methionine sulfoxide reductase MsrA 1\tK07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]" }, { "name":"BN406_04806 msrA3; Peptide methionine sulfoxide reductase MsrA 3\tK07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]" }, { "name":"BN406_00072 hypothetical protein\tK07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]" }, { "name":"BN406_00647 msrB1; Peptide methionine sulfoxide reductase MsrB 1\tK07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]" }, { "name":"BN406_04805 msrB2; Peptide methionine sulfoxide reductase MsrB 2\tK07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]" }, { "name":"BN406_00446 glutathione S-transferase\tK11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]" }, { "name":"BN406_00705 yfcG; putative disulfide bond reductase yfcG\tK11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]" }, { "name":"BN406_02221 hypothetical protein\tK07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]" }, { "name":"BN406_01114 yedY; Sulfoxide reductase catalytic subunit YedY\tK07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]" }, { "name":"BN406_02327 cpo; Non-heme chloroperoxidase\tK00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]" }, { "name":"BN406_04115 cpo1; Non-heme chloroperoxidase\tK00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]" }, { "name":"BN406_04738 cpo3; Non-heme chloroperoxidase\tK00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]" }, { "name":"BN406_04897 alpha\/beta hydrolase fold protein\tK00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]" }, { "name":"BN406_05519 cpo1; Non-heme chloroperoxidase\tK00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]" }, { "name":"BN406_06603 cpo3; Non-heme chloroperoxidase\tK00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]" }, { "name":"BN406_01483 bcp; bacterioferritin comigratory protein\tK03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]" }, { "name":"BN406_02316 Putative peroxiredoxin in rpoN2 3'region\tK24157 prxII; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]" }, { "name":"BN406_05581 PRX1; Mitochondrial peroxiredoxin PRX1\tK24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]" }, { "name":"BN406_00619 hypothetical protein\tK04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]" }, { "name":"BN406_03503 peroxiredoxin Ohr subfamily\tK04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]" }, { "name":"BN406_03735 pirin family protein\tK06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]" }, { "name":"BN406_04407 hypothetical protein\tK06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]" }, { "name":"BN406_04370 hmp; Flavohemoprotein\tK05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]" }, { "name":"BN406_03236 hypothetical protein\tK22342 dmmA; dimethylamine monooxygenase subunit A [EC:1.14.13.238]" }, { "name":"BN406_03235 yeaX; Putative dioxygenase subunit beta yeaX\tK22343 dmmB; dimethylamine monooxygenase subunit B [EC:1.14.13.238]" }, { "name":"BN406_03234 hypothetical protein\tK22344 dmmC; dimethylamine monooxygenase subunit C [EC:1.14.13.238]" }, { "name":"BN406_04196 Ring-hydroxylating dioxygenase\tK24003 stc2; stachydrine N-demethylase [EC:1.14.13.247]" }, { "name":"BN406_04902 Ring-hydroxylating dioxygenase\tK24003 stc2; stachydrine N-demethylase [EC:1.14.13.247]" }, { "name":"BN406_04217 Monoxygenase\tK23464 tgnB; flavin-dependent trigonelline monooxygenase, oxygenase component [EC:1.14.14.-]" }, { "name":"BN406_05222 yxeK; Putative monooxygenase yxeK\tK24116 scmK; N-acetyl-S-(2-succino)cysteine monooxygenase [EC:1.14.-.-]" }, { "name":"BN406_00221 multicopper oxidase type 3\tK22348 moxA; manganese oxidase [EC:1.16.3.3]" }, { "name":"BN406_01204 fpr; Ferredoxin--NADP reductase\tK00528 fpr; ferredoxin\/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]" }, { "name":"BN406_00810 arsC; arsenate reductase\tK00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]" }, { "name":"BN406_06456 pqqE; Coenzyme PQQ synthesis protein E\tK06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]" }, { "name":"BN406_01244 protein-L-isoaspartate(D-aspartate) O-methyltransferase\tK00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]" }, { "name":"BN406_01265 pcm; Protein-L-isoaspartate O-methyltransferase\tK00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]" }, { "name":"BN406_04579 pcm1; Protein-L-isoaspartate O-methyltransferase 1\tK00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]" }, { "name":"BN406_00814 cfa2; cyclopropane-fatty-acyl-phospholipid synthase\tK00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]" }, { "name":"BN406_03410 cfa1; cyclopropane-fatty-acyl-phospholipid synthase\tK00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]" }, { "name":"BN406_00624 tam; Trans-aconitate 2-methyltransferase\tK00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]" }, { "name":"BN406_04209 nodL; Nodulation protein L\tK00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]" }, { "name":"BN406_00042 lnt; apolipoprotein N-acyltransferase\tK03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]" }, { "name":"BN406_00037 olsA; acyltransferase transmembrane protein\tK22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]" }, { "name":"BN406_02073 hypothetical protein\tK27837 cdhC; 3-dehydrocarnitine:acetyl-CoA trimethylamine transferase [EC:2.3.1.317]" }, { "name":"BN406_01407 hypothetical protein\tK03824 yhbS; putative acetyltransferase [EC:2.3.1.-]" }, { "name":"BN406_01164 N-acetyltransferase GCN5\tK03829 yedL; putative acetyltransferase [EC:2.3.1.-]" }, { "name":"BN406_04273 nodA; acyltransferase\tK14658 nodA; nodulation protein A [EC:2.3.1.-]" }, { "name":"BN406_04262 nodE; Nodulation protein E\tK14660 nodE; nodulation protein E [EC:2.3.1.-]" }, { "name":"BN406_04261 nodF; acyl carrier protein\tK14661 nodF; nodulation protein F [EC:2.3.1.-]" }, { "name":"BN406_01295 acetyltransferase (antibiotic resistance) protein\tK24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]" }, { "name":"BN406_01051 aat; leucyl\/phenylalanyl-tRNA--protein transferase\tK00684 aat; leucyl\/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]" }, { "name":"BN406_00937 arginyl-tRNA-protein transferase\tK21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]" }, { "name":"BN406_00026 hypothetical protein\tK22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30]" }, { "name":"BN406_02193 lgt; prolipoprotein diacylglyceryl transferase\tK13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]" }, { "name":"BN406_04369 nosX; NosX accesory protein\tK03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]" }, { "name":"BN406_05240 glycerone kinase\tK20902 derK; D-erythrulose 4-kinase [EC:2.7.1.210]" }, { "name":"BN406_02059 eriA; erythritol kinase\tK00862 eryA; erythritol kinase (D-erythritol 1-phosphate-forming) [EC:2.7.1.215]" }, { "name":"BN406_05322 putative protein HI_1011\tK21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]" }, { "name":"BN406_02811 sugar kinase\tK10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218]" }, { "name":"BN406_03672 ribokinase-like domain-containing protein\tK10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218]" }, { "name":"BN406_06509 hypothetical protein\tK22129 dtnK; D-threonate\/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]" }, { "name":"BN406_06278 hypothetical protein\tK23247 oiaK; 3-oxoisoapionate kinase [EC:2.7.1.231]" }, { "name":"BN406_03137 hypothetical protein\tK09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase \/ [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]" }, { "name":"BN406_00682 glnE; bifunctional glutamine-synthetase adenylyltransferase\/deadenyltransferase\tK00982 glnE; [glutamine synthetase] adenylyltransferase \/ [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]" }, { "name":"BN406_04412 reverse transcriptase\tK00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]" }, { "name":"BN406_05390 RNA-directed DNA polymerase\tK00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]" }, { "name":"BN406_05824 RNA-directed DNA polymerase\tK00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]" }, { "name":"BN406_06092 RNA-directed DNA polymerase\tK00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]" }, { "name":"BN406_06101 RNA-directed DNA polymerase\tK00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]" }, { "name":"BN406_00639 hypothetical protein\tK08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]" }, { "name":"BN406_02129 hypothetical protein\tK21014 stf0; trehalose 2-sulfotransferase [EC:2.8.2.37]" }, { "name":"BN406_06318 hypothetical protein\tK23246 apnL; D-apionolactonase [EC:3.1.1.115]" }, { "name":"BN406_02601 hypothetical protein\tK07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]" }, { "name":"BN406_01539 hypothetical protein\tK08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]" }, { "name":"BN406_03005 hypothetical protein\tK08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]" }, { "name":"BN406_00605 betC; Choline-sulfatase\tK01133 betC; choline-sulfatase [EC:3.1.6.6]" }, { "name":"BN406_01389 yjcS; putative protein yjcS\tK25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]" }, { "name":"BN406_01336 hypothetical protein\tK03424 tatD; TatD DNase family protein [EC:3.1.21.-]" }, { "name":"BN406_06432 hypothetical protein\tK27494 exoMA1; D-arabinan exo alpha-(1,3)\/(1,5)-arabinofuranosidase (non-reducing end) [EC:3.2.1.225]" }, { "name":"BN406_05589 exoK; Endo-1,3-1,4-beta-glycanase ExoK\tK16559 exoK; endo-1,3-1,4-beta-glycanase ExoK [EC:3.2.1.-]" }, { "name":"BN406_02546 penicillin-binding protein\tK01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]" }, { "name":"BN406_00052 def; Peptide deformylase\tK01462 PDF; peptide deformylase [EC:3.5.1.88]" }, { "name":"BN406_01133 Peptide deformylase-like\tK01462 PDF; peptide deformylase [EC:3.5.1.88]" }, { "name":"BN406_02672 laaA; L-amino acid amidase\tK18457 laaA; L-proline amide hydrolase [EC:3.5.1.101]" }, { "name":"BN406_03701 unnamed protein product\tK22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]" }, { "name":"BN406_02475 nitrilase\/cyanide hydratase and apolipoprotein N-acyltransferase\tK11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]" }, { "name":"BN406_04272 nodB; Chitooligosaccharide deacetylase\tK14659 nodB; chitooligosaccharide deacetylase [EC:3.5.1.-]" }, { "name":"BN406_04215 hypothetical protein\tK23465 tgnD; (E)-2-((N-methylformamido)methylene)succinate hydrolase [EC:3.5.1.-]" }, { "name":"BN406_02348 speB2; agmatinase\tK18459 gpuA; guanidinopropionase [EC:3.5.3.17]" }, { "name":"BN406_05950 translation initiation inhibitor\tK09022 ridA; 2-iminobutanoate\/2-iminopropanoate deaminase [EC:3.5.99.10]" }, { "name":"BN406_03679 frlB; Fructosamine deglycase frlB\tK10708 frlB; fructoselysine 6-phosphate deglycase [EC:3.5.-.-]" }, { "name":"BN406_02216 ATPase\tK03924 moxR; MoxR-like ATPase [EC:3.6.3.-]" }, { "name":"BN406_01503 hypothetical protein\tK07002 RBBP9; serine hydrolase [EC:3.-.-.-]" }, { "name":"BN406_05326 class II aldolase\/adducin family protein\tK22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]" }, { "name":"BN406_06279 putative ribulose bisphosphate carboxylase-like protein\tK24268 oiaX; 3-oxoisoapionate-4-phosphate decarboxylase [EC:4.1.1.121]" }, { "name":"BN406_03153 altronate hydrolase\tK26399 K26399; arabinonate dehydratase [EC:4.2.1.5]" }, { "name":"BN406_01377 hypothetical protein\tK23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase \/ NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]" }, { "name":"BN406_02077 caiD; Carnitinyl-CoA dehydratase\tK08299 caiD; crotonobetainyl-CoA hydratase [EC:4.2.1.149]" }, { "name":"BN406_02439 aminotransferase\tK29020 E5.1.1.15; 2-aminohexano-6-lactam racemase [EC:5.1.1.15]" }, { "name":"BN406_04469 Isomerase\tK18910 dpe; D-psicose\/D-tagatose\/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31]" }, { "name":"BN406_06197 probabable D-tagatose 3-epimerase\tK18910 dpe; D-psicose\/D-tagatose\/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31]" }, { "name":"BN406_00250 rhaM; L-rhamnose mutarotase\tK03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]" }, { "name":"BN406_05963 hypothetical protein\tK03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]" }, { "name":"BN406_02052 eryC; D-erythrulose-1-phosphate dehydrogenase\tK21909 eryC; D-erythrulose 1-phosphate 3-epimerase [EC:5.1.3.38]" }, { "name":"BN406_03681 xylose isomerase domain-containing protein\tK10709 frlC; fructoselysine 3-epimerase [EC:5.1.3.41]" }, { "name":"BN406_01317 ppi1; putative peptidyl-prolyl cis-trans isomerase\tK01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]" }, { "name":"BN406_02050 tpiA2; Triosephosphate isomerase 2\tK21910 eryH; L-erythrulose 1-phosphate isomerase [EC:5.3.1.33]" }, { "name":"BN406_02049 rpiB; ribose-5-phosphate isomerase B\tK21911 eryI; D-erythrulose 4-phosphate isomerase [EC:5.3.1.34]" }, { "name":"BN406_05323 putative 28,3 kDa protein in gbd 5'region\tK22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]" }, { "name":"BN406_06265 hydantoinase B\/oxoprolinase\tK10854 acxB; acetone carboxylase, alpha subunit [EC:6.4.1.6]" }, { "name":"BN406_06266 acxA; Acetone carboxylase beta subunit\tK10855 acxA; acetone carboxylase, beta subunit [EC:6.4.1.6]" }, { "name":"BN406_06264 hypothetical protein\tK10856 acxC; acetone carboxylase, gamma subunit [EC:6.4.1.6]" }, { "name":"BN406_04081 copper-translocating P-type ATPase\tK01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]" }, { "name":"BN406_04379 fixI; Nitrogen fixation protein FixI\tK01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]" }, { "name":"BN406_04774 actP; ActP Copper translocating P-type ATPase\tK01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]" }, { "name":"BN406_03258 zntA; Lead, cadmium, zinc and mercury-transporting ATPase\tK01534 zntA; Zn2+\/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]" } ] }, { "name":"99981 Carbohydrate metabolism", "children":[ { "name":"BN406_01468 sfsA; sugar fermentation stimulation protein A\tK06206 sfsA; sugar fermentation stimulation protein A" }, { "name":"BN406_04036 putative secreted protein\tK11930 torT; periplasmic protein TorT" }, { "name":"BN406_02810 phosphosugar isomerase\tK19510 gfrF; fructoselysine-6-phosphate deglycase" }, { "name":"BN406_00476 ilvD1; dihydroxy-acid dehydratase\tK22216 ilvD1; dehydratase ilvD1" }, { "name":"BN406_00477 hypothetical protein\tK22217 K22217; sugar lactone lactonase" } ] }, { "name":"99982 Energy metabolism", "children":[ { "name":"BN406_02863 fdsC; formate dehydrogenase accessory protein\tK02379 fdhD; FdhD protein" }, { "name":"BN406_03059 ferredoxin protein\tK05524 fdxA; ferredoxin" }, { "name":"BN406_04413 norD; NorD accessory protein for nitric oxide reductase\tK02448 norD; nitric oxide reductase NorD protein" }, { "name":"BN406_04418 norE; NorE accessory protein for nitric oxide reductase\tK02164 norE; nitric oxide reductase NorE protein" }, { "name":"BN406_04414 norQ; Protein NorQ\tK04748 norQ; nitric oxide reductase NorQ protein" }, { "name":"BN406_04394 napD; NapD component of periplasmic nitrate reductase\tK02570 napD; periplasmic nitrate reductase NapD" }, { "name":"BN406_04395 ferredoxin-type protein NapF\tK02572 napF; ferredoxin-type protein NapF" }, { "name":"BN406_04396 napE; NapE component of periplasmic nitrate reductase\tK02571 napE; periplasmic nitrate reductase NapE" }, { "name":"BN406_04241 nifX; Protein nifX\tK02596 nifX; nitrogen fixation protein NifX" }, { "name":"BN406_04227 fixU; nitrogen fixation protein FixU\tK02593 nifT; nitrogen fixation protein NifT" }, { "name":"BN406_04229 nifB; FeMo cofactor biosynthesis protein nifB\tK02585 nifB; nitrogen fixation protein NifB" }, { "name":"BN406_04275 nifN; Nitrogenase iron-molybdenum cofactor biosynthesis protein NifN\tK02592 nifN; nitrogenase molybdenum-iron protein NifN" }, { "name":"BN406_04240 nifE; Nitrogenase iron-molybdenum cofactor biosynthesis protein NifE\tK02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE" }, { "name":"BN406_04140 napC1; Cytochrome c-type protein NapC\tK02569 napC; NapC\/NirT family cytochrome c" }, { "name":"BN406_04391 napC3; Cytochrome c-type protein NapC\tK02569 napC; NapC\/NirT family cytochrome c" }, { "name":"BN406_02501 etfB; Electron transfer flavoprotein subunit beta\tK03521 fixA; electron transfer flavoprotein beta subunit" }, { "name":"BN406_04234 fixA; Protein fixA\tK03521 fixA; electron transfer flavoprotein beta subunit" }, { "name":"BN406_04497 etfB; Electron transfer flavoprotein subunit beta\tK03521 fixA; electron transfer flavoprotein beta subunit" }, { "name":"BN406_06751 hypothetical protein\tK03521 fixA; electron transfer flavoprotein beta subunit" }, { "name":"BN406_06754 etfB; Electron transfer flavoprotein subunit beta\tK03521 fixA; electron transfer flavoprotein beta subunit" }, { "name":"BN406_04231 fixX; Ferredoxin-like protein\tK03855 fixX; ferredoxin like protein" }, { "name":"BN406_06589 hypothetical protein\tK09165 K09165; dodecin" }, { "name":"BN406_04197 ferredoxin\tK24004 stc4; stachydrine N-demethylase, reductase component" }, { "name":"BN406_04901 oxidoreductase\tK24004 stc4; stachydrine N-demethylase, reductase component" }, { "name":"BN406_04198 hypothetical protein\tK24005 stc3; stachydrine N-demethylase, flavoprotein component" }, { "name":"BN406_04200 hypothetical protein\tK24005 stc3; stachydrine N-demethylase, flavoprotein component" } ] }, { "name":"99983 Lipid metabolism", "children":[ { "name":"BN406_01039 aidB; Putative acyl-CoA dehydrogenase AidB\tK09456 aidB; putative acyl-CoA dehydrogenase" } ] }, { "name":"99984 Nucleotide metabolism" }, { "name":"99985 Amino acid metabolism", "children":[ { "name":"BN406_03337 CysZ-like protein\tK06203 cysZ; CysZ protein" }, { "name":"BN406_03125 hypothetical protein\tK06997 yggS; PLP dependent protein" } ] }, { "name":"99986 Glycan metabolism", "children":[ { "name":"BN406_05592 exoI1; Succinoglycan biosynthesis protein exoI\tK16561 exoI; succinoglycan biosynthesis protein ExoI" }, { "name":"BN406_04248 syrA; SyrA protein involved in EPS production\tK16565 exoX; exopolysaccharide production regulatory protein" }, { "name":"BN406_05597 exoX; posttranscriptional regulator, repressor protein\tK16565 exoX; exopolysaccharide production regulatory protein" }, { "name":"BN406_05600 exoQ; Exopolysaccharide production protein exoQ\tK16567 exoQ; exopolysaccharide production protein ExoQ" }, { "name":"BN406_03308 hypothetical protein\tK07027 K07027; glycosyltransferase 2 family protein" }, { "name":"BN406_06563 hypothetical protein\tK07027 K07027; glycosyltransferase 2 family protein" } ] }, { "name":"99987 Cofactor metabolism", "children":[ { "name":"BN406_01688 cobW; Protein CobW\tK02234 cobW; cobalamin biosynthesis protein CobW" }, { "name":"BN406_02938 hypothetical protein\tK02498 hemY; HemY protein" }, { "name":"BN406_03495 aarF; ubiquinone biosynthesis protein\tK03688 ubiB; ubiquinone biosynthesis protein" }, { "name":"BN406_01601 mobB; molybdopterin-guanine dinucleotide biosynthesis protein\tK03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein" }, { "name":"BN406_01186 hypothetical protein\tK18588 COQ10; coenzyme Q-binding protein COQ10" } ] }, { "name":"99988 Secondary metabolism", "children":[ { "name":"BN406_02341 oxidoreductase\tK19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)" } ] }, { "name":"99999 Others", "children":[ { "name":"BN406_02342 mhqA; Putative ring-cleaving dioxygenase mhqA\tK15975 K15975; glyoxalase family protein" }, { "name":"BN406_03621 mhqO; Putative ring-cleaving dioxygenase mhqO\tK15975 K15975; glyoxalase family protein" }, { "name":"BN406_05792 mhqO; Putative ring-cleaving dioxygenase mhqO\tK15975 K15975; glyoxalase family protein" }, { "name":"BN406_00121 DoxX family protein\tK15977 K15977; putative oxidoreductase" }, { "name":"BN406_03398 DoxX family protein\tK15977 K15977; putative oxidoreductase" }, { "name":"BN406_03596 DoxX family protein\tK15977 K15977; putative oxidoreductase" }, { "name":"BN406_05199 DoxX family protein\tK15977 K15977; putative oxidoreductase" }, { "name":"BN406_06164 hypothetical protein\tK15977 K15977; putative oxidoreductase" }, { "name":"BN406_02339 hypothetical protein\tK06999 K06999; phospholipase\/carboxylesterase" }, { "name":"BN406_04751 phospholipase\/Carboxylesterase\tK06999 K06999; phospholipase\/carboxylesterase" }, { "name":"BN406_05791 esteraselipase\/thioesterase\tK06999 K06999; phospholipase\/carboxylesterase" } ] } ] }, { "name":"09192 Unclassified: genetic information processing", "children":[ { "name":"99973 Transcription", "children":[ { "name":"BN406_01459 cspA5; cold shock transcription regulator protein\tK03704 cspA; cold shock protein" }, { "name":"BN406_01633 unnamed protein product\tK03704 cspA; cold shock protein" }, { "name":"BN406_01876 unnamed protein product\tK03704 cspA; cold shock protein" }, { "name":"BN406_01933 unnamed protein product\tK03704 cspA; cold shock protein" }, { "name":"BN406_02180 unnamed protein product\tK03704 cspA; cold shock protein" }, { "name":"BN406_03828 unnamed protein product\tK03704 cspA; cold shock protein" }, { "name":"BN406_04186 unnamed protein product\tK03704 cspA; cold shock protein" }, { "name":"BN406_04894 unnamed protein product\tK03704 cspA; cold shock protein" }, { "name":"BN406_04983 unnamed protein product\tK03704 cspA; cold shock protein" }, { "name":"BN406_05017 unnamed protein product\tK03704 cspA; cold shock protein" }, { "name":"BN406_06634 unnamed protein product\tK03704 cspA; cold shock protein" }, { "name":"BN406_02989 glnB3; Nitrogen regulatory protein P-II\tK04752 glnK; nitrogen regulatory protein P-II 2" }, { "name":"BN406_00815 putative protein HI_0568\tK06959 tex; protein Tex" } ] }, { "name":"99974 Translation", "children":[ { "name":"BN406_02763 putative mRNA 3-end processing factor\tK07577 K07577; putative mRNA 3-end processing factor" } ] }, { "name":"99975 Protein processing", "children":[ { "name":"BN406_01218 clpS1; ATP-dependent Clp protease adapter protein ClpS 1\tK06891 clpS; ATP-dependent Clp protease adaptor protein ClpS" }, { "name":"BN406_02206 clpS2; ATP-dependent Clp protease adapter protein ClpS 2\tK06891 clpS; ATP-dependent Clp protease adaptor protein ClpS" }, { "name":"BN406_01278 tig; trigger factor\tK03545 tig; trigger factor" }, { "name":"BN406_01113 sulfite oxidase subunit YedZ\tK17247 msrQ; methionine sulfoxide reductase heme-binding subunit" }, { "name":"BN406_05083 fdhE; formate dehydrogenase subunit epsilon\tK02380 fdhE; FdhE protein" }, { "name":"BN406_02314 ureE; urease accessory protein UreE\tK03187 ureE; urease accessory protein" }, { "name":"BN406_02313 ureF; urease accessory protein\tK03188 ureF; urease accessory protein" }, { "name":"BN406_02312 ureG; urease accessory protein\tK03189 ureG; urease accessory protein" }, { "name":"BN406_02325 ureD; urease accessory protein\tK03190 ureD; urease accessory protein" }, { "name":"BN406_00795 smpB; SsrA-binding protein\tK03664 smpB; SsrA-binding protein" }, { "name":"BN406_03470 hypothetical protein\tK07391 comM; magnesium chelatase family protein" }, { "name":"BN406_06395 hypothetical protein\tK07397 yhfA; putative redox protein" }, { "name":"BN406_03397 hypothetical protein\tK07401 K07401; selenoprotein W-related protein" }, { "name":"BN406_01490 hypothetical protein\tK07402 xdhC; xanthine dehydrogenase accessory factor" }, { "name":"BN406_05865 xdhC; probabable xanthine dehydrogenase protein\tK07402 xdhC; xanthine dehydrogenase accessory factor" }, { "name":"BN406_05557 nfeD; membrane protein necessary for nodulation competitiveness\tK07403 nfeD; membrane-bound serine protease (ClpP class)" } ] }, { "name":"99976 Replication and repair", "children":[ { "name":"BN406_01470 radC; DNA repair protein RadC\tK03630 radC; DNA repair protein RadC" }, { "name":"BN406_00051 hypothetical protein\tK09760 rmuC; DNA recombination protein RmuC" }, { "name":"BN406_03468 hypothetical protein\tK07460 yraN; putative endonuclease" }, { "name":"BN406_03396 hypothetical protein\tK07461 K07461; putative endonuclease" }, { "name":"BN406_01035 smf; hypothetical protein\tK04096 smf; DNA processing protein" }, { "name":"BN406_01819 terS2; phage Terminase small subunit\tK07474 xtmA; phage terminase small subunit" }, { "name":"BN406_01116 rarA; Replication-associated recombination protein A\tK07478 ycaJ; putative ATPase" }, { "name":"BN406_02459 transposase IS4 family protein\tK07481 K07481; transposase, IS5 family" }, { "name":"BN406_02461 TRm17a transposase\tK07481 K07481; transposase, IS5 family" }, { "name":"BN406_02850 TRm17; transposase ISRM17\tK07481 K07481; transposase, IS5 family" }, { "name":"BN406_06063 transposase IS4 family protein\tK07481 K07481; transposase, IS5 family" }, { "name":"BN406_04136 TRm24 transposase\tK07482 K07482; transposase, IS30 family" }, { "name":"BN406_04341 TRm24 transposase\tK07482 K07482; transposase, IS30 family" }, { "name":"BN406_02123 transposase IS3\/IS911 family protein\tK07483 K07483; transposase" }, { "name":"BN406_02458 transposase IS3\/IS911 family protein\tK07483 K07483; transposase" }, { "name":"BN406_03818 transposase, fragment\tK07483 K07483; transposase" }, { "name":"BN406_04255 transposase IS3\/IS911 family protein\tK07483 K07483; transposase" }, { "name":"BN406_06043 putative transposase number 1 for insertion sequence isrm26\tK07483 K07483; transposase" }, { "name":"BN406_06046 unnamed protein product\tK07483 K07483; transposase" }, { "name":"BN406_02121 putative protein y4jD\tK07484 K07484; transposase" }, { "name":"BN406_02122 putative protein y4jC\tK07484 K07484; transposase" }, { "name":"BN406_02126 putative protein y4qI\tK07484 K07484; transposase" }, { "name":"BN406_02127 IS66 Orf2 family protein\tK07484 K07484; transposase" }, { "name":"BN406_02140 IS66 Orf2 family protein\tK07484 K07484; transposase" }, { "name":"BN406_02141 transposase IS66\tK07484 K07484; transposase" }, { "name":"BN406_02456 putative protein y4jD\tK07484 K07484; transposase" }, { "name":"BN406_02457 putative protein y4jC\tK07484 K07484; transposase" }, { "name":"BN406_03819 unnamed protein product\tK07484 K07484; transposase" }, { "name":"BN406_03820 Transposase\tK07484 K07484; transposase" }, { "name":"BN406_04256 putative protein y4jC\tK07484 K07484; transposase" }, { "name":"BN406_04257 putative protein y4jD\tK07484 K07484; transposase" }, { "name":"BN406_04669 IS66 Orf2 family protein\tK07484 K07484; transposase" }, { "name":"BN406_04670 putative protein y4qI\tK07484 K07484; transposase" }, { "name":"BN406_06034 IS66 Orf2 family protein\tK07484 K07484; transposase" }, { "name":"BN406_06035 transposase IS66\tK07484 K07484; transposase" }, { "name":"BN406_06042 putative transposase protein\tK07484 K07484; transposase" }, { "name":"BN406_06044 TRm26.2; transposase number 2 for insertion sequence ISRM26\tK07484 K07484; transposase" }, { "name":"BN406_06045 putative protein y4qI\tK07484 K07484; transposase" }, { "name":"BN406_06629 transposase IS66\tK07484 K07484; transposase" }, { "name":"BN406_06630 IS66 Orf2 family protein\tK07484 K07484; transposase" }, { "name":"BN406_01176 transposase IS116\/IS110\/IS902 family protein\tK07486 K07486; transposase" }, { "name":"BN406_01535 transposase IS116\/IS110\/IS902 family protein\tK07486 K07486; transposase" }, { "name":"BN406_01918 TRm19; transposase of insertion sequence ISRm19 protein\tK07486 K07486; transposase" }, { "name":"BN406_02624 transposase IS116\/IS110\/IS902 family protein\tK07486 K07486; transposase" }, { "name":"BN406_05327 transposase IS116\/IS110\/IS902 family protein\tK07486 K07486; transposase" }, { "name":"BN406_06394 TRm19; transposase of insertion sequence ISRm19 protein\tK07486 K07486; transposase" }, { "name":"BN406_01928 Transposase for insertion sequence element ISRM3\tK07493 K07493; putative transposase" }, { "name":"BN406_02048 Transposase for insertion sequence element ISRM5\tK07493 K07493; putative transposase" }, { "name":"BN406_02118 Transposase for insertion sequence element ISRM3\tK07493 K07493; putative transposase" }, { "name":"BN406_02460 Transposase for insertion sequence element ISRM3\tK07493 K07493; putative transposase" }, { "name":"BN406_02835 Transposase for insertion sequence element ISRM5\tK07493 K07493; putative transposase" }, { "name":"BN406_04724 Transposase for insertion sequence element ISRM3\tK07493 K07493; putative transposase" }, { "name":"BN406_04725 Transposase for insertion sequence element ISRM3\tK07493 K07493; putative transposase" }, { "name":"BN406_04867 Transposase for insertion sequence element ISRM3\tK07493 K07493; putative transposase" }, { "name":"BN406_06752 Transposase for insertion sequence element ISRM3\tK07493 K07493; putative transposase" }, { "name":"BN406_06753 Transposase for insertion sequence element ISRM3\tK07493 K07493; putative transposase" }, { "name":"BN406_03613 transposase\tK07497 K07497; putative transposase" }, { "name":"BN406_04225 syrB3; putative transcriptional regulator syrB3\tK07497 K07497; putative transposase" }, { "name":"BN406_04250 unnamed protein product\tK07497 K07497; putative transposase" }, { "name":"BN406_04600 syrB2; putative transcriptional regulator syrB2\tK07497 K07497; putative transposase" }, { "name":"BN406_04662 syrB; Transcriptional regulator syrB\tK07497 K07497; putative transposase" }, { "name":"BN406_06731 hypothetical protein\tK07497 K07497; putative transposase" }, { "name":"BN406_06732 integrase catalytic region\tK07497 K07497; putative transposase" } ] }, { "name":"99979 Viral proteins" }, { "name":"99998 Others", "children":[ { "name":"BN406_03362 hypothetical protein\tK09747 ebfC; nucleoid-associated protein EbfC" } ] } ] }, { "name":"09193 Unclassified: signaling and cellular processes", "children":[ { "name":"99977 Transport", "children":[ { "name":"BN406_04157 amino acid permease\tK03294 TC.APA; basic amino acid\/polyamine antiporter, APA family" }, { "name":"BN406_00429 Putative phosphate permease HP_1491\tK03306 TC.PIT; inorganic phosphate transporter, PiT family" }, { "name":"BN406_03316 pit; putative low-affinity inorganic phosphate transporter\tK03306 TC.PIT; inorganic phosphate transporter, PiT family" }, { "name":"BN406_01662 putative transporter HI_0183\tK03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family" }, { "name":"BN406_06588 agcS; Sodium\/alanine symporter AgcS\tK03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family" }, { "name":"BN406_00440 transporter transmembrane protein\tK03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family" } ] }, { "name":"99978 Cell growth", "children":[ { "name":"BN406_03037 intracellular septation protein A\tK06190 ispZ; intracellular septation protein" }, { "name":"BN406_04373 hypothetical protein\tK07322 ytfE; regulator of cell morphogenesis and NO signaling" }, { "name":"BN406_01130 SpoVR family protein\tK06415 spoVR; stage V sporulation protein R" }, { "name":"BN406_02963 peptidase M23\tK22719 envC; murein hydrolase activator" } ] }, { "name":"99993 Cell motility" }, { "name":"99995 Signaling proteins", "children":[ { "name":"BN406_00643 UspA domain-containing protein\tK14061 uspF; universal stress protein F" }, { "name":"BN406_02946 typA; GTP-binding protein TypA\/BipA\tK06207 typA; GTP-binding protein" }, { "name":"BN406_03214 hypothetical protein\tK07168 K07168; CBS domain-containing membrane protein" }, { "name":"BN406_00039 phoH-like protein\tK06217 phoH; phosphate starvation-inducible protein PhoH and related proteins" }, { "name":"BN406_01128 yeaG; putative protein yeaG\tK07180 prkA; serine protein kinase" }, { "name":"BN406_03810 Non-specific serine\/threonine protein kinase\tK08482 kaiC; circadian clock protein KaiC" } ] }, { "name":"99992 Structural proteins", "children":[ { "name":"BN406_00208 rkpJ; capsular polysaccharide biosynthesis\/export protein\tK07265 kpsS; capsular polysaccharide export protein" }, { "name":"BN406_00343 hypothetical protein\tK07289 asmA; AsmA protein" }, { "name":"BN406_06062 AsmA family protein\tK07289 asmA; AsmA protein" }, { "name":"BN406_02663 hypothetical protein\tK07340 ybbJ; inner membrane protein" }, { "name":"BN406_04648 hypothetical protein\tK11744 tqsA; AI-2 transport protein TqsA" }, { "name":"BN406_00676 cycJ; cytochrome c-type biogenesis protein CcmE\tK02197 ccmE; cytochrome c-type biogenesis protein CcmE" }, { "name":"BN406_00675 cycH; Cytochrome c-type biogenesis protein CycH\tK02200 ccmH; cytochrome c-type biogenesis protein CcmH" }, { "name":"BN406_00678 cycL; cytochrome C-type biogenesis transmembrane protein\tK02200 ccmH; cytochrome c-type biogenesis protein CcmH" } ] }, { "name":"99994 Others", "children":[ { "name":"BN406_00147 phoU; phosphate transporter PhoU\tK02039 phoU; phosphate transport system protein" }, { "name":"BN406_03334 hypothetical protein\tK06201 cutC; copper homeostasis protein" }, { "name":"BN406_05243 phnK; Phosphonates transport ATP-binding protein PhnK\tK05781 phnK; putative phosphonate transport system ATP-binding protein" }, { "name":"BN406_00153 apaG; ApaG\tK06195 apaG; ApaG protein" }, { "name":"BN406_04365 nosD; NosD nitrous oxidase accessory protein\tK07218 nosD; nitrous oxidase accessory protein" }, { "name":"BN406_06553 probabable FAD-dependent oxidoreductase\tK07222 K07222; putative flavoprotein involved in K+ transport" }, { "name":"BN406_02276 hmuS; hemin transport protein\tK07225 hmuS; putative hemin transport protein" }, { "name":"BN406_03453 signal peptide protein\tK07231 K07231; putative iron-regulated protein" }, { "name":"BN406_04401 nnrS3; NnrS family protein\tK07234 K07234; uncharacterized protein involved in response to NO" }, { "name":"BN406_04368 nosL; NosL copper chaperone\tK19342 nosL; copper chaperone NosL" } ] } ] }, { "name":"09194 Poorly characterized", "children":[ { "name":"99996 General function prediction only", "children":[ { "name":"BN406_00861 cvpA; colicin V production transmembrane protein\tK03558 cvpA; membrane protein required for colicin V production" }, { "name":"BN406_00781 chitinase-like protein\tK03791 K03791; putative chitinase" }, { "name":"BN406_01782 chitinase-like protein\tK03791 K03791; putative chitinase" }, { "name":"BN406_04106 chitinase-like protein\tK03791 K03791; putative chitinase" }, { "name":"BN406_05922 hypothetical protein\tK04477 ycdX; putative hydrolase" }, { "name":"BN406_06459 pqqB; pyrroloquinoline quinone biosynthesis protein PqqB\tK06136 pqqB; pyrroloquinoline quinone biosynthesis protein B" }, { "name":"BN406_06457 pqqD; pyrroloquinoline quinone synthesis protein D\tK06138 pqqD; pyrroloquinoline quinone biosynthesis protein D" }, { "name":"BN406_02189 csaA; chaperone protein\tK06878 K06878; tRNA-binding protein" }, { "name":"BN406_02268 hypothetical protein\tK06886 glbN; hemoglobin" }, { "name":"BN406_02427 hypothetical protein\tK06886 glbN; hemoglobin" }, { "name":"BN406_00459 hypothetical protein\tK07001 K07001; NTE family protein" }, { "name":"BN406_01150 hypothetical protein\tK07001 K07001; NTE family protein" }, { "name":"BN406_00066 hypothetical protein\tK07025 K07025; putative hydrolase of the HAD superfamily" }, { "name":"BN406_02125 hypothetical protein\tK07025 K07025; putative hydrolase of the HAD superfamily" }, { "name":"BN406_04764 HAD-superfamily hydrolase\tK07025 K07025; putative hydrolase of the HAD superfamily" }, { "name":"BN406_01477 UPF0051 protein\tK09014 sufB; Fe-S cluster assembly protein SufB" }, { "name":"BN406_01475 hypothetical protein\tK09015 sufD; Fe-S cluster assembly protein SufD" }, { "name":"BN406_02496 ribonuclease RNase BN (RBN) transmembrane protein\tK07058 K07058; membrane protein" }, { "name":"BN406_05723 ribonuclease BN\tK07058 K07058; membrane protein" }, { "name":"BN406_05729 hypothetical protein\tK07058 K07058; membrane protein" }, { "name":"BN406_01969 hypothetical protein\tK07100 K07100; putative phosphoribosyl transferase" }, { "name":"BN406_03143 hypothetical protein\tK07113 fxsA; UPF0716 protein FxsA" }, { "name":"BN406_00656 hypothetical protein\tK02426 sufE; cysteine desulfuration protein SufE" }, { "name":"BN406_02743 hypothetical protein\tK07146 K07146; UPF0176 protein" }, { "name":"BN406_00005 hypothetical protein\tK04750 phnB; PhnB protein" }, { "name":"BN406_04877 hypothetical protein\tK04750 phnB; PhnB protein" }, { "name":"BN406_00809 arsH; hypothetical protein\tK11811 arsH; arsenical resistance protein ArsH" }, { "name":"BN406_02094 transporter\tK13255 fhuF; ferric iron reductase protein FhuF" }, { "name":"BN406_05720 hypothetical protein\tK02351 K02351; putative membrane protein" }, { "name":"BN406_00507 hypothetical protein\tK03744 lemA; LemA protein" }, { "name":"BN406_03338 hypothetical protein\tK03745 slyX; SlyX protein" }, { "name":"BN406_01971 creA; CREA protein\tK05805 creA; CreA protein" }, { "name":"BN406_01541 hypothetical protein\tK08990 ycjF; putative membrane protein" }, { "name":"BN406_05202 hypothetical protein\tK08995 K08995; putative membrane protein" }, { "name":"BN406_06442 hypothetical protein\tK08995 K08995; putative membrane protein" }, { "name":"BN406_00620 phnA; alkylphosphonate uptake protein\tK06193 phnA; protein PhnA" } ] }, { "name":"99997 Function unknown", "children":[ { "name":"BN406_03493 hypothetical protein\tK06867 K06867; uncharacterized protein" }, { "name":"BN406_03862 putative protein PA2218\tK06889 K06889; uncharacterized protein" }, { "name":"BN406_04990 hypothetical protein\tK06889 K06889; uncharacterized protein" }, { "name":"BN406_03023 hypothetical protein\tK06890 K06890; uncharacterized protein" }, { "name":"BN406_03532 hypothetical protein\tK06893 K06893; uncharacterized protein" }, { "name":"BN406_06748 hypothetical protein\tK06893 K06893; uncharacterized protein" }, { "name":"BN406_01540 hypothetical protein\tK06918 K06918; uncharacterized protein" }, { "name":"BN406_01268 hypothetical protein\tK06923 K06923; uncharacterized protein" }, { "name":"BN406_00983 hypothetical protein\tK06929 K06929; uncharacterized protein" }, { "name":"BN406_06590 hypothetical protein\tK06934 K06934; uncharacterized protein" }, { "name":"BN406_01619 hypothetical protein\tK06938 K06938; uncharacterized protein" }, { "name":"BN406_00115 hypothetical protein\tK06940 K06940; uncharacterized protein" }, { "name":"BN406_00826 hypothetical protein\tK06950 K06950; uncharacterized protein" }, { "name":"BN406_00174 hypothetical protein\tK06953 K06953; uncharacterized protein" }, { "name":"BN406_02573 hypothetical protein\tK06975 K06975; uncharacterized protein" }, { "name":"BN406_02084 hypothetical protein\tK06978 K06978; uncharacterized protein" }, { "name":"BN406_03439 hypothetical protein\tK06987 K06987; uncharacterized protein" }, { "name":"BN406_00985 hypothetical protein\tK06995 K06995; uncharacterized protein" }, { "name":"BN406_04756 hypothetical protein\tK06995 K06995; uncharacterized protein" }, { "name":"BN406_01665 hypothetical protein\tK06996 K06996; uncharacterized protein" }, { "name":"BN406_02693 hypothetical protein\tK06996 K06996; uncharacterized protein" }, { "name":"BN406_04386 putative protein RA0666\tK07005 K07005; uncharacterized protein" }, { "name":"BN406_01594 hypothetical protein\tK07006 K07006; uncharacterized protein" }, { "name":"BN406_05127 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein\tK07006 K07006; uncharacterized protein" }, { "name":"BN406_01479 putative protein RP471\tK07018 K07018; uncharacterized protein" }, { "name":"BN406_05304 hypothetical protein\tK07020 K07020; uncharacterized protein" }, { "name":"BN406_01986 hypothetical protein\tK07032 K07032; uncharacterized protein" }, { "name":"BN406_03648 Glyoxalase\/bleomycin resistance protein\/dioxygenase\tK07032 K07032; uncharacterized protein" }, { "name":"BN406_04178 hypothetical protein\tK07032 K07032; uncharacterized protein" }, { "name":"BN406_02120 yecA family protein\tK07039 K07039; uncharacterized protein" }, { "name":"BN406_02455 yecA family protein\tK07039 K07039; uncharacterized protein" }, { "name":"BN406_04258 yecA family protein\tK07039 K07039; uncharacterized protein" }, { "name":"BN406_04690 hypothetical protein\tK07045 K07045; uncharacterized protein" }, { "name":"BN406_06520 amidohydrolase 2\tK07045 K07045; uncharacterized protein" }, { "name":"BN406_06521 amidohydrolase 2\tK07045 K07045; uncharacterized protein" }, { "name":"BN406_01311 hypothetical protein\tK07054 K07054; uncharacterized protein" }, { "name":"BN406_03444 hypothetical protein\tK07064 K07064; uncharacterized protein" }, { "name":"BN406_06023 DNA polymerase beta domain-containing protein region\tK07076 K07076; uncharacterized protein" }, { "name":"BN406_06373 TRAP transporter solute receptor TAXI family\tK07080 K07080; uncharacterized protein" }, { "name":"BN406_00169 hypothetical protein\tK07090 K07090; uncharacterized protein" }, { "name":"BN406_01677 UPF0721 transmembrane protein\tK07090 K07090; uncharacterized protein" }, { "name":"BN406_02639 hypothetical protein\tK07090 K07090; uncharacterized protein" }, { "name":"BN406_03046 hypothetical protein\tK07090 K07090; uncharacterized protein" }, { "name":"BN406_03522 hypothetical protein\tK07090 K07090; uncharacterized protein" }, { "name":"BN406_04483 hypothetical protein\tK07090 K07090; uncharacterized protein" }, { "name":"BN406_06378 hypothetical protein\tK07090 K07090; uncharacterized protein" }, { "name":"BN406_06552 hypothetical protein\tK07090 K07090; uncharacterized protein" }, { "name":"BN406_00824 hypothetical protein\tK07093 K07093; uncharacterized protein" }, { "name":"BN406_02605 hypothetical protein\tK07098 K07098; uncharacterized protein" }, { "name":"BN406_05675 hypothetical protein\tK07112 K07112; uncharacterized protein" }, { "name":"BN406_03790 dTDP-4-dehydrorhamnose reductase\tK07118 K07118; uncharacterized protein" }, { "name":"BN406_01920 abrB; transmembrane protein\tK07120 K07120; uncharacterized protein" }, { "name":"BN406_01322 short-chain dehydrogenase\/reductase SDR\tK07124 K07124; uncharacterized protein" }, { "name":"BN406_06450 short-chain dehydrogenase\/reductase SDR\tK07124 K07124; uncharacterized protein" }, { "name":"BN406_00327 Sel1 domain-containing protein repeat-containing protein\tK07126 K07126; uncharacterized protein" }, { "name":"BN406_00707 hypothetical protein\tK07126 K07126; uncharacterized protein" }, { "name":"BN406_02637 hypothetical protein\tK07126 K07126; uncharacterized protein" }, { "name":"BN406_05081 Sel1 domain-containing protein repeat-containing protein\tK07126 K07126; uncharacterized protein" }, { "name":"BN406_00827 hypothetical protein\tK07140 K07140; MOSC domain-containing protein" }, { "name":"BN406_02985 hypothetical protein\tK07157 K07157; uncharacterized protein" }, { "name":"BN406_01492 hypothetical protein\tK07161 K07161; uncharacterized protein" }, { "name":"BN406_01154 hypothetical protein\tK08998 K08998; uncharacterized protein" }, { "name":"BN406_05409 hypothetical protein\tK09003 K09003; uncharacterized protein" }, { "name":"BN406_01458 signal peptide protein\tK09005 K09005; uncharacterized protein" }, { "name":"BN406_02170 hypothetical protein\tK09117 K09117; uncharacterized protein" }, { "name":"BN406_00668 hypothetical protein\tK09160 K09160; uncharacterized protein" }, { "name":"BN406_00021 hypothetical protein\tK09386 K09386; uncharacterized protein" }, { "name":"BN406_05317 hypothetical protein\tK09702 K09702; uncharacterized protein" }, { "name":"BN406_02523 hypothetical protein\tK09705 K09705; uncharacterized protein" }, { "name":"BN406_01944 hypothetical protein\tK09707 K09707; uncharacterized protein" }, { "name":"BN406_01124 hypothetical protein\tK09768 K09768; uncharacterized protein" }, { "name":"BN406_02932 YciI-like protein\tK09780 K09780; uncharacterized protein" }, { "name":"BN406_01129 hypothetical protein\tK09786 K09786; uncharacterized protein" }, { "name":"BN406_06137 hypothetical protein\tK09790 K09790; uncharacterized protein" }, { "name":"BN406_02986 hypothetical protein\tK09791 K09791; uncharacterized protein" }, { "name":"BN406_04775 hypothetical protein\tK09792 K09792; uncharacterized protein" }, { "name":"BN406_02667 hypothetical protein\tK09795 K09795; uncharacterized protein" }, { "name":"BN406_02965 hypothetical protein\tK09798 K09798; uncharacterized protein" }, { "name":"BN406_05397 hypothetical protein\tK09799 K09799; uncharacterized protein" }, { "name":"BN406_00095 hypothetical protein\tK09803 K09803; uncharacterized protein" }, { "name":"BN406_02158 hypothetical protein\tK09807 K09807; uncharacterized protein" }, { "name":"BN406_00233 zinc-binding protein\tK09862 K09862; uncharacterized protein" }, { "name":"BN406_01223 hypothetical protein\tK09919 K09919; uncharacterized protein" }, { "name":"BN406_01629 transmembrane signal peptide protein\tK09922 K09922; uncharacterized protein" }, { "name":"BN406_01589 hypothetical protein\tK09924 K09924; uncharacterized protein" }, { "name":"BN406_00546 hypothetical protein\tK09927 K09927; uncharacterized protein" }, { "name":"BN406_00804 hypothetical protein\tK09928 K09928; uncharacterized protein" }, { "name":"BN406_01945 putative membrane protein\tK09937 K09937; uncharacterized protein" }, { "name":"BN406_03449 hypothetical protein\tK09947 K09947; uncharacterized protein" }, { "name":"BN406_02650 hypothetical protein\tK09948 K09948; uncharacterized protein" }, { "name":"BN406_05164 hypothetical protein\tK09955 K09955; uncharacterized protein" }, { "name":"BN406_02622 hypothetical protein\tK09957 K09957; uncharacterized protein" }, { "name":"BN406_02200 hypothetical protein\tK09959 K09959; uncharacterized protein" }, { "name":"BN406_01814 hypothetical protein\tK09960 K09960; uncharacterized protein" }, { "name":"BN406_00752 hypothetical protein\tK09961 K09961; uncharacterized protein" }, { "name":"BN406_01816 phage-associated protein\tK09961 K09961; uncharacterized protein" }, { "name":"BN406_01817 CRISPR-associated protein\tK09961 K09961; uncharacterized protein" }, { "name":"BN406_02085 hypothetical protein\tK09964 K09964; uncharacterized protein" }, { "name":"BN406_02903 hypothetical protein\tK09973 K09973; uncharacterized protein" }, { "name":"BN406_02562 hypothetical protein\tK09975 K09975; uncharacterized protein" }, { "name":"BN406_01046 hypothetical protein\tK09982 K09982; uncharacterized protein" }, { "name":"BN406_02323 hypothetical protein\tK09984 K09984; uncharacterized protein" }, { "name":"BN406_01956 hypothetical protein\tK09985 K09985; uncharacterized protein" }, { "name":"BN406_02215 hypothetical protein\tK09986 K09986; uncharacterized protein" }, { "name":"BN406_03123 hypothetical protein\tK09987 K09987; uncharacterized protein" }, { "name":"BN406_01246 hypothetical protein\tK09991 K09991; uncharacterized protein" }, { "name":"BN406_02923 hypothetical protein\tK09992 K09992; uncharacterized protein" }, { "name":"BN406_04622 hypothetical protein\tK07807 K07807; uncharacterized protein" }, { "name":"BN406_03317 Pit accessory protein\tK07220 K07220; uncharacterized protein" }, { "name":"BN406_06131 hypothetical protein\tK07276 K07276; uncharacterized protein" }, { "name":"BN406_03451 signal peptide protein\tK07338 K07338; uncharacterized protein" }, { "name":"BN406_03369 hypothetical protein\tK07742 ylxR; uncharacterized protein" } ] } ] } ] } ] }