{ "name":"ssph00001", "children":[ { "name":"09100 Metabolism", "children":[ { "name":"09101 Carbohydrate metabolism", "children":[ { "name":"00010 Glycolysis \/ Gluconeogenesis [PATH:ssph00010]", "children":[ { "name":"SPSPH_028280 hypothetical protein\tK00844 HK; hexokinase [EC:2.7.1.1]" }, { "name":"SPSPH_032780 pgi; (GenBank) Glucose-6-phosphate isomerase\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]" }, { "name":"SPSPH_007580 pfkA; (GenBank) ATP-dependent 6-phosphofructokinase\tK00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]" }, { "name":"SPSPH_004390 pfp; (GenBank) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase\tK21071 pfk; ATP-dependent phosphofructokinase \/ diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]" }, { "name":"SPSPH_002690 glpX; (GenBank) Fructose-1,6-bisphosphatase class 2\tK02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]" }, { "name":"SPSPH_019950 gatY; (GenBank) D-tagatose-1,6-bisphosphate aldolase subunit GatY\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"SPSPH_024140 fba; (GenBank) Fructose-bisphosphate aldolase\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"SPSPH_040130 kbaY; (GenBank) D-tagatose-1,6-bisphosphate aldolase subunit KbaY\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"SPSPH_043880 lsrF; (GenBank) 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase\tK11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]" }, { "name":"SPSPH_030280 tpiA; (GenBank) Triosephosphate isomerase\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]" }, { "name":"SPSPH_030300 gap; (GenBank) Glyceraldehyde-3-phosphate dehydrogenase\tK00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]" }, { "name":"SPSPH_030290 pgk; (GenBank) Phosphoglycerate kinase\tK00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]" }, { "name":"SPSPH_030270 gpmI_2; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase\tK15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]" }, { "name":"SPSPH_008730 apgM_1; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase\tK15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]" }, { "name":"SPSPH_038920 apgM_2; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase\tK15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]" }, { "name":"SPSPH_030260 eno; (GenBank) Enolase\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]" }, { "name":"SPSPH_022700 pyk_1; (GenBank) Pyruvate kinase\tK00873 PK; pyruvate kinase [EC:2.7.1.40]" }, { "name":"SPSPH_030320 pyk_2; (GenBank) Pyruvate kinase\tK00873 PK; pyruvate kinase [EC:2.7.1.40]" }, { "name":"SPSPH_012230 ppdK; (GenBank) Pyruvate, phosphate dikinase\tK01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]" }, { "name":"SPSPH_028760 pdhC; (GenBank) Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"SPSPH_023930 pdhD; (GenBank) Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SPSPH_012450 Oxalate oxidoreductase subunit delta\tK00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]" }, { "name":"SPSPH_013160 Pyruvate:ferredoxin oxidoreductase\tK03737 por; pyruvate-ferredoxin\/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.8.1]" }, { "name":"SPSPH_034630 Pyruvate:ferredoxin oxidoreductase\tK03737 por; pyruvate-ferredoxin\/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.8.1]" }, { "name":"SPSPH_002280 korA_1; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_013240 korA_2; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_013720 padG; (GenBank) NADH-dependent phenylglyoxylate dehydrogenase subunit alpha\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_016040 korA_3; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_021210 korA_4; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_029550 korA_5; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_031760 korA_6; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_032010 korA_7; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_032120 korA_8; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_038190 hypothetical protein\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_002290 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_013250 korB_1; (GenBank) 2-oxoglutarate oxidoreductase subunit KorB\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_013730 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_016050 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_021200 korB_2; (GenBank) 2-oxoglutarate oxidoreductase subunit KorB\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_029540 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_031750 korB_3; (GenBank) 2-oxoglutarate oxidoreductase subunit KorB\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_032000 korB_4; (GenBank) 2-oxoglutarate oxidoreductase subunit KorB\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_032110 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_011130 ldh; (GenBank) L-lactate dehydrogenase\tK00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]" }, { "name":"SPSPH_010620 adhB_1; (GenBank) Alcohol dehydrogenase 2\tK13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]" }, { "name":"SPSPH_023220 adhB_2; (GenBank) Alcohol dehydrogenase 2\tK13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]" }, { "name":"SPSPH_040790 algC_2; (GenBank) Phosphomannomutase\/phosphoglucomutase\tK15778 pmm-pgm; phosphomannomutase \/ phosphoglucomutase [EC:5.4.2.8 5.4.2.2]" }, { "name":"SPSPH_037870 gapN; (GenBank) NADP-dependent glyceraldehyde-3-phosphate dehydrogenase\tK00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]" }, { "name":"SPSPH_024640 pckA; (GenBank) Phosphoenolpyruvate carboxykinase (ATP)\tK01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]" } ] }, { "name":"00020 Citrate cycle (TCA cycle) [PATH:ssph00020]", "children":[ { "name":"SPSPH_040010 leuC_2; (GenBank) 3-isopropylmalate dehydratase large subunit\tK27802 acnA; aconitate hydratase A \/ 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]" }, { "name":"SPSPH_023930 pdhD; (GenBank) Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SPSPH_002280 korA_1; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_013240 korA_2; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_013720 padG; (GenBank) NADH-dependent phenylglyoxylate dehydrogenase subunit alpha\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_016040 korA_3; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_021210 korA_4; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_029550 korA_5; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_031760 korA_6; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_032010 korA_7; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_032120 korA_8; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_038190 hypothetical protein\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_002290 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_013250 korB_1; (GenBank) 2-oxoglutarate oxidoreductase subunit KorB\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_013730 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_016050 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_021200 korB_2; (GenBank) 2-oxoglutarate oxidoreductase subunit KorB\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_029540 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_031750 korB_3; (GenBank) 2-oxoglutarate oxidoreductase subunit KorB\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_032000 korB_4; (GenBank) 2-oxoglutarate oxidoreductase subunit KorB\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_032110 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_002300 padE_1; (GenBank) NADH-dependent phenylglyoxylate dehydrogenase subunit gamma\tK00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]" }, { "name":"SPSPH_013260 hypothetical protein\tK00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]" }, { "name":"SPSPH_016060 padE_3; (GenBank) NADH-dependent phenylglyoxylate dehydrogenase subunit gamma\tK00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]" }, { "name":"SPSPH_021190 porC_1; (GenBank) Pyruvate synthase subunit PorC\tK00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]" }, { "name":"SPSPH_029530 hypothetical protein\tK00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]" }, { "name":"SPSPH_031740 hypothetical protein\tK00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]" }, { "name":"SPSPH_031990 porC_2; (GenBank) Pyruvate synthase subunit PorC\tK00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]" }, { "name":"SPSPH_032100 porC_3; (GenBank) Pyruvate synthase subunit PorC\tK00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]" }, { "name":"SPSPH_038170 hypothetical protein\tK00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]" }, { "name":"SPSPH_002270 hypothetical protein\tK00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]" }, { "name":"SPSPH_013230 hypothetical protein\tK00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]" }, { "name":"SPSPH_013750 hypothetical protein\tK00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]" }, { "name":"SPSPH_016030 hypothetical protein\tK00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]" }, { "name":"SPSPH_021220 ndhI_2; (GenBank) NAD(P)H-quinone oxidoreductase subunit I, chloroplastic\tK00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]" }, { "name":"SPSPH_031770 rsxB_3; (GenBank) Ion-translocating oxidoreductase complex subunit B\tK00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]" }, { "name":"SPSPH_032020 rsxB_4; (GenBank) Ion-translocating oxidoreductase complex subunit B\tK00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]" }, { "name":"SPSPH_032130 rsxB_5; (GenBank) Ion-translocating oxidoreductase complex subunit B\tK00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]" }, { "name":"SPSPH_038200 rsxB_6; (GenBank) Ion-translocating oxidoreductase complex subunit B\tK00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]" }, { "name":"SPSPH_040100 sucD; (GenBank) Succinate--CoA ligase [ADP-forming] subunit alpha\tK01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]" }, { "name":"SPSPH_002340 cat1_1; (GenBank) Succinyl-CoA:coenzyme A transferase\tK18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]" }, { "name":"SPSPH_014490 cat1_2; (GenBank) Succinyl-CoA:coenzyme A transferase\tK18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]" }, { "name":"SPSPH_037050 sdhB_2; (GenBank) 8-methylmenaquinol:fumarate reductase iron-sulfur subunit\tK00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]" }, { "name":"SPSPH_037060 sdhE_2; (GenBank) 8-methylmenaquinol:fumarate reductase membrane anchor subunit\tK00241 sdhC; succinate dehydrogenase cytochrome b subunit" }, { "name":"SPSPH_031540 ttdA; (GenBank) L(+)-tartrate dehydratase subunit alpha\tK01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]" }, { "name":"SPSPH_031530 fumA; (GenBank) Fumarate hydratase class I, aerobic\tK01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]" }, { "name":"SPSPH_012540 pycA; (GenBank) Pyruvate carboxylase\tK01958 PC; pyruvate carboxylase [EC:6.4.1.1]" }, { "name":"SPSPH_024640 pckA; (GenBank) Phosphoenolpyruvate carboxykinase (ATP)\tK01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]" }, { "name":"SPSPH_028760 pdhC; (GenBank) Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"SPSPH_012450 Oxalate oxidoreductase subunit delta\tK00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]" }, { "name":"SPSPH_013160 Pyruvate:ferredoxin oxidoreductase\tK03737 por; pyruvate-ferredoxin\/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.8.1]" }, { "name":"SPSPH_034630 Pyruvate:ferredoxin oxidoreductase\tK03737 por; pyruvate-ferredoxin\/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.8.1]" } ] }, { "name":"00030 Pentose phosphate pathway [PATH:ssph00030]", "children":[ { "name":"SPSPH_032780 pgi; (GenBank) Glucose-6-phosphate isomerase\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]" }, { "name":"SPSPH_021580 rpe; (GenBank) Ribulose-phosphate 3-epimerase\tK01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]" }, { "name":"SPSPH_030740 aptB; (GenBank) Apulose-4-phosphate transketolase subunit B\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"SPSPH_030750 aptA; (GenBank) Apulose-4-phosphate transketolase subunit A\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"SPSPH_002680 tal; (GenBank) Transaldolase\tK00616 TALDO1; transaldolase [EC:2.2.1.2]" }, { "name":"SPSPH_033900 ywlF; (GenBank) Putative sugar phosphate isomerase YwlF\tK01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]" }, { "name":"SPSPH_040830 deoC; (GenBank) Deoxyribose-phosphate aldolase\tK01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]" }, { "name":"SPSPH_018570 deoB; (GenBank) Phosphopentomutase\tK01839 deoB; phosphopentomutase [EC:5.4.2.7]" }, { "name":"SPSPH_040790 algC_2; (GenBank) Phosphomannomutase\/phosphoglucomutase\tK15778 pmm-pgm; phosphomannomutase \/ phosphoglucomutase [EC:5.4.2.8 5.4.2.2]" }, { "name":"SPSPH_001990 prs; (GenBank) Ribose-phosphate pyrophosphokinase\tK00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]" }, { "name":"SPSPH_037870 gapN; (GenBank) NADP-dependent glyceraldehyde-3-phosphate dehydrogenase\tK00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]" }, { "name":"SPSPH_022780 ghrB; (GenBank) Glyoxylate\/hydroxypyruvate reductase B\tK00032 E1.1.1.43; phosphogluconate 2-dehydrogenase [EC:1.1.1.43]" }, { "name":"SPSPH_014390 hypothetical protein\tK03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]" }, { "name":"SPSPH_019950 gatY; (GenBank) D-tagatose-1,6-bisphosphate aldolase subunit GatY\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"SPSPH_024140 fba; (GenBank) Fructose-bisphosphate aldolase\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"SPSPH_040130 kbaY; (GenBank) D-tagatose-1,6-bisphosphate aldolase subunit KbaY\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"SPSPH_043880 lsrF; (GenBank) 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase\tK11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]" }, { "name":"SPSPH_002690 glpX; (GenBank) Fructose-1,6-bisphosphatase class 2\tK02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]" }, { "name":"SPSPH_007580 pfkA; (GenBank) ATP-dependent 6-phosphofructokinase\tK00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]" }, { "name":"SPSPH_004390 pfp; (GenBank) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase\tK21071 pfk; ATP-dependent phosphofructokinase \/ diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]" } ] }, { "name":"00040 Pentose and glucuronate interconversions [PATH:ssph00040]", "children":[ { "name":"SPSPH_034300 hypothetical protein\tK26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]" }, { "name":"SPSPH_007460 kduD; (GenBank) 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase\tK00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]" }, { "name":"SPSPH_023600 uxaA_1; (GenBank) Altronate dehydratase\tK16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7]" }, { "name":"SPSPH_035850 uxaA_2; (GenBank) Altronate dehydratase\tK16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7]" }, { "name":"SPSPH_039180 garD_2; (GenBank) Galactarate dehydratase (L-threo-forming)\tK16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7]" }, { "name":"SPSPH_023590 suyB; (GenBank) (2R)-sulfolactate sulfo-lyase subunit beta\tK16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7]" }, { "name":"SPSPH_035860 uxaA_3; (GenBank) Altronate dehydratase\tK16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7]" }, { "name":"SPSPH_039170 uxaA_4; (GenBank) Altronate dehydratase\tK16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7]" }, { "name":"SPSPH_032840 ywqF; (GenBank) UDP-glucose 6-dehydrogenase YwqF\tK00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]" }, { "name":"SPSPH_032790 gtaB; (GenBank) UTP--glucose-1-phosphate uridylyltransferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]" }, { "name":"SPSPH_021580 rpe; (GenBank) Ribulose-phosphate 3-epimerase\tK01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]" }, { "name":"SPSPH_005570 yagE; (GenBank) Putative 2-dehydro-3-deoxy-D-gluconate aldolase YagE\tK22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28]" }, { "name":"SPSPH_013500 drdA; (GenBank) 5-deoxy-D-ribulose 1-phosphate aldolase\tK01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]" } ] }, { "name":"00051 Fructose and mannose metabolism [PATH:ssph00051]", "children":[ { "name":"SPSPH_032810 algA; (GenBank) Alginate biosynthesis protein AlgA\tK16011 algA; mannose-1-phosphate guanylyltransferase \/ mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]" }, { "name":"SPSPH_032800 algC_1; (GenBank) Phosphomannomutase\/phosphoglucomutase\tK01840 manB; phosphomannomutase [EC:5.4.2.8]" }, { "name":"SPSPH_040790 algC_2; (GenBank) Phosphomannomutase\/phosphoglucomutase\tK15778 pmm-pgm; phosphomannomutase \/ phosphoglucomutase [EC:5.4.2.8 5.4.2.2]" }, { "name":"SPSPH_032860 gmd; (GenBank) GDP-mannose 4,6-dehydratase\tK01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]" }, { "name":"SPSPH_032850 fcl; (GenBank) GDP-L-fucose synthase\tK02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]" }, { "name":"SPSPH_013500 drdA; (GenBank) 5-deoxy-D-ribulose 1-phosphate aldolase\tK01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]" }, { "name":"SPSPH_028280 hypothetical protein\tK00844 HK; hexokinase [EC:2.7.1.1]" }, { "name":"SPSPH_007580 pfkA; (GenBank) ATP-dependent 6-phosphofructokinase\tK00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]" }, { "name":"SPSPH_004390 pfp; (GenBank) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase\tK21071 pfk; ATP-dependent phosphofructokinase \/ diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]" }, { "name":"SPSPH_002690 glpX; (GenBank) Fructose-1,6-bisphosphatase class 2\tK02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]" }, { "name":"SPSPH_019950 gatY; (GenBank) D-tagatose-1,6-bisphosphate aldolase subunit GatY\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"SPSPH_024140 fba; (GenBank) Fructose-bisphosphate aldolase\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"SPSPH_040130 kbaY; (GenBank) D-tagatose-1,6-bisphosphate aldolase subunit KbaY\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"SPSPH_043880 lsrF; (GenBank) 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase\tK11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]" }, { "name":"SPSPH_030280 tpiA; (GenBank) Triosephosphate isomerase\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]" }, { "name":"SPSPH_033900 ywlF; (GenBank) Putative sugar phosphate isomerase YwlF\tK01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]" } ] }, { "name":"00052 Galactose metabolism [PATH:ssph00052]", "children":[ { "name":"SPSPH_013520 galE; (GenBank) UDP-glucose 4-epimerase\tK01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]" }, { "name":"SPSPH_016020 UDP-glucose 4-epimerase\tK01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]" }, { "name":"SPSPH_032790 gtaB; (GenBank) UTP--glucose-1-phosphate uridylyltransferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]" }, { "name":"SPSPH_040790 algC_2; (GenBank) Phosphomannomutase\/phosphoglucomutase\tK15778 pmm-pgm; phosphomannomutase \/ phosphoglucomutase [EC:5.4.2.8 5.4.2.2]" }, { "name":"SPSPH_028280 hypothetical protein\tK00844 HK; hexokinase [EC:2.7.1.1]" }, { "name":"SPSPH_007580 pfkA; (GenBank) ATP-dependent 6-phosphofructokinase\tK00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]" }, { "name":"SPSPH_004390 pfp; (GenBank) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase\tK21071 pfk; ATP-dependent phosphofructokinase \/ diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]" } ] }, { "name":"00053 Ascorbate and aldarate metabolism [PATH:ssph00053]", "children":[ { "name":"SPSPH_032840 ywqF; (GenBank) UDP-glucose 6-dehydrogenase YwqF\tK00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]" }, { "name":"SPSPH_032830 wbgU; (GenBank) UDP-N-acetylglucosamine 4-epimerase\tK08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]" }, { "name":"SPSPH_031090 gudD; (GenBank) Glucarate dehydratase\tK01706 gudD; glucarate dehydratase [EC:4.2.1.40]" }, { "name":"SPSPH_038900 garD_1; (GenBank) Galactarate dehydratase (L-threo-forming)\tK01708 garD; galactarate dehydratase [EC:4.2.1.42]" } ] }, { "name":"00500 Starch and sucrose metabolism [PATH:ssph00500]", "children":[ { "name":"SPSPH_032790 gtaB; (GenBank) UTP--glucose-1-phosphate uridylyltransferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]" }, { "name":"SPSPH_000940 glgC_1; (GenBank) Glucose-1-phosphate adenylyltransferase\tK00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]" }, { "name":"SPSPH_001090 glgC_2; (GenBank) Glucose-1-phosphate adenylyltransferase\tK00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]" }, { "name":"SPSPH_001110 glgC_3; (GenBank) Glucose-1-phosphate adenylyltransferase\tK00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]" }, { "name":"SPSPH_001120 glgD; (GenBank) Glycogen biosynthesis protein GlgD\tK00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]" }, { "name":"SPSPH_026370 glgC_4; (GenBank) Glucose-1-phosphate adenylyltransferase\tK00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]" }, { "name":"SPSPH_001130 glgA; (GenBank) Glycogen synthase\tK00703 glgA; starch synthase [EC:2.4.1.21]" }, { "name":"SPSPH_001100 glgB; (GenBank) 1,4-alpha-glucan branching enzyme GlgB\tK00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]" }, { "name":"SPSPH_001140 glgP_1; (GenBank) Glycogen phosphorylase\tK00688 PYG; glycogen phosphorylase [EC:2.4.1.1]" }, { "name":"SPSPH_026240 glgP_2; (GenBank) Glycogen phosphorylase\tK00688 PYG; glycogen phosphorylase [EC:2.4.1.1]" }, { "name":"SPSPH_026360 glgP_3; (GenBank) Glycogen phosphorylase\tK00688 PYG; glycogen phosphorylase [EC:2.4.1.1]" }, { "name":"SPSPH_040790 algC_2; (GenBank) Phosphomannomutase\/phosphoglucomutase\tK15778 pmm-pgm; phosphomannomutase \/ phosphoglucomutase [EC:5.4.2.8 5.4.2.2]" }, { "name":"SPSPH_028280 hypothetical protein\tK00844 HK; hexokinase [EC:2.7.1.1]" }, { "name":"SPSPH_032780 pgi; (GenBank) Glucose-6-phosphate isomerase\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]" } ] }, { "name":"00620 Pyruvate metabolism [PATH:ssph00620]", "children":[ { "name":"SPSPH_012450 Oxalate oxidoreductase subunit delta\tK00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]" }, { "name":"SPSPH_013160 Pyruvate:ferredoxin oxidoreductase\tK03737 por; pyruvate-ferredoxin\/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.8.1]" }, { "name":"SPSPH_034630 Pyruvate:ferredoxin oxidoreductase\tK03737 por; pyruvate-ferredoxin\/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.8.1]" }, { "name":"SPSPH_002280 korA_1; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_013240 korA_2; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_013720 padG; (GenBank) NADH-dependent phenylglyoxylate dehydrogenase subunit alpha\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_016040 korA_3; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_021210 korA_4; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_029550 korA_5; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_031760 korA_6; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_032010 korA_7; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_032120 korA_8; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_038190 hypothetical protein\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_002290 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_013250 korB_1; (GenBank) 2-oxoglutarate oxidoreductase subunit KorB\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_013730 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_016050 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_021200 korB_2; (GenBank) 2-oxoglutarate oxidoreductase subunit KorB\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_029540 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_031750 korB_3; (GenBank) 2-oxoglutarate oxidoreductase subunit KorB\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_032000 korB_4; (GenBank) 2-oxoglutarate oxidoreductase subunit KorB\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_032110 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_028760 pdhC; (GenBank) Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"SPSPH_023930 pdhD; (GenBank) Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SPSPH_034330 pflB; (GenBank) Formate acetyltransferase\tK00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]" }, { "name":"SPSPH_044550 bphJ; (GenBank) Acetaldehyde dehydrogenase 4\tK18366 bphJ; acetaldehyde\/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]" }, { "name":"SPSPH_010620 adhB_1; (GenBank) Alcohol dehydrogenase 2\tK13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]" }, { "name":"SPSPH_023220 adhB_2; (GenBank) Alcohol dehydrogenase 2\tK13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]" }, { "name":"SPSPH_016700 ackA; (GenBank) Acetate kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]" }, { "name":"SPSPH_010770 pduL_1; (GenBank) Phosphate propanoyltransferase\tK15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]" }, { "name":"SPSPH_021230 pduL_2; (GenBank) Phosphate propanoyltransferase\tK15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]" }, { "name":"SPSPH_022700 pyk_1; (GenBank) Pyruvate kinase\tK00873 PK; pyruvate kinase [EC:2.7.1.40]" }, { "name":"SPSPH_030320 pyk_2; (GenBank) Pyruvate kinase\tK00873 PK; pyruvate kinase [EC:2.7.1.40]" }, { "name":"SPSPH_002340 cat1_1; (GenBank) Succinyl-CoA:coenzyme A transferase\tK18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]" }, { "name":"SPSPH_014490 cat1_2; (GenBank) Succinyl-CoA:coenzyme A transferase\tK18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]" }, { "name":"SPSPH_001560 carA_1; (GenBank) Caffeate CoA-transferase\tK01026 pct; propionate CoA-transferase [EC:2.8.3.1]" }, { "name":"SPSPH_027140 carA_3; (GenBank) Caffeate CoA-transferase\tK01026 pct; propionate CoA-transferase [EC:2.8.3.1]" }, { "name":"SPSPH_041930 ydiF; (GenBank) Acetate CoA-transferase YdiF\tK01026 pct; propionate CoA-transferase [EC:2.8.3.1]" }, { "name":"SPSPH_014190 putative FAD-linked oxidoreductase\tK26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436]" }, { "name":"SPSPH_023000 putative FAD-linked oxidoreductase\tK26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436]" }, { "name":"SPSPH_022990 carE_4; (GenBank) Caffeyl-CoA reductase-Etf complex subunit CarE\tK26114 lctC; lactate dehydrogenase (NAD+,ferredoxin) subunit LctC" }, { "name":"SPSPH_022980 carD_4; (GenBank) Caffeyl-CoA reductase-Etf complex subunit CarD\tK26115 lctB; lactate dehydrogenase (NAD+,ferredoxin) subunit LctB" }, { "name":"SPSPH_011130 ldh; (GenBank) L-lactate dehydrogenase\tK00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]" }, { "name":"SPSPH_036710 hypothetical protein\tK01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]" }, { "name":"SPSPH_020430 gloC; (GenBank) Hydroxyacylglutathione hydrolase GloC\tK01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]" }, { "name":"SPSPH_001450 larA_1; (GenBank) Lactate racemase\tK22373 larA; lactate racemase [EC:5.1.2.1]" }, { "name":"SPSPH_005540 larA_3; (GenBank) Lactate racemase\tK22373 larA; lactate racemase [EC:5.1.2.1]" }, { "name":"SPSPH_031720 larA_4; (GenBank) Lactate racemase\tK22373 larA; lactate racemase [EC:5.1.2.1]" }, { "name":"SPSPH_033550 larA_5; (GenBank) Lactate racemase\tK22373 larA; lactate racemase [EC:5.1.2.1]" }, { "name":"SPSPH_036030 larA_6; (GenBank) Lactate racemase\tK22373 larA; lactate racemase [EC:5.1.2.1]" }, { "name":"SPSPH_040080 larA_7; (GenBank) Lactate racemase\tK22373 larA; lactate racemase [EC:5.1.2.1]" }, { "name":"SPSPH_040070 NAD-dependent malic enzyme\tK00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]" }, { "name":"SPSPH_023780 oadA; (GenBank) Oxaloacetate decarboxylase alpha chain\tK01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]" }, { "name":"SPSPH_000580 gcdB_1; (GenBank) Glutaconyl-CoA decarboxylase subunit beta\tK20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]" }, { "name":"SPSPH_014570 gcdB_2; (GenBank) Glutaconyl-CoA decarboxylase subunit beta\tK20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]" }, { "name":"SPSPH_012540 pycA; (GenBank) Pyruvate carboxylase\tK01958 PC; pyruvate carboxylase [EC:6.4.1.1]" }, { "name":"SPSPH_031540 ttdA; (GenBank) L(+)-tartrate dehydratase subunit alpha\tK01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]" }, { "name":"SPSPH_031530 fumA; (GenBank) Fumarate hydratase class I, aerobic\tK01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]" }, { "name":"SPSPH_024640 pckA; (GenBank) Phosphoenolpyruvate carboxykinase (ATP)\tK01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]" }, { "name":"SPSPH_012230 ppdK; (GenBank) Pyruvate, phosphate dikinase\tK01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]" }, { "name":"SPSPH_001550 thlA_1; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_007500 thlA_2; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_041940 thlA_3; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_038230 leuA_1; (GenBank) 2-isopropylmalate synthase\tK01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]" }, { "name":"SPSPH_042540 leuA_3; (GenBank) 2-isopropylmalate synthase\tK01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]" }, { "name":"SPSPH_041370 frbC; (GenBank) 2-phosphonomethylmalate synthase\tK02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]" }, { "name":"SPSPH_041380 leuA_2; (GenBank) 2-isopropylmalate synthase\tK02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]" } ] }, { "name":"00630 Glyoxylate and dicarboxylate metabolism [PATH:ssph00630]", "children":[ { "name":"SPSPH_040010 leuC_2; (GenBank) 3-isopropylmalate dehydratase large subunit\tK27802 acnA; aconitate hydratase A \/ 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]" }, { "name":"SPSPH_001550 thlA_1; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_007500 thlA_2; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_041940 thlA_3; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_001510 phaJ; (GenBank) (R)-specific enoyl-CoA hydratase\tK17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]" }, { "name":"SPSPH_014530 epi; (GenBank) Ethylmalonyl-CoA\/methylmalonyl-CoA epimerase\tK05606 MCEE; methylmalonyl-CoA\/ethylmalonyl-CoA epimerase [EC:5.1.99.1]" }, { "name":"SPSPH_014510 mcm; (GenBank) Methylmalonyl-CoA mutase\tK01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]" }, { "name":"SPSPH_014500 bhbA; (GenBank) Methylmalonyl-CoA mutase\tK01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]" }, { "name":"SPSPH_031610 glmE; (GenBank) Glutamate mutase epsilon subunit\tK19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]" }, { "name":"SPSPH_031630 glmS_7; (GenBank) Glutamate mutase sigma subunit\tK01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]" }, { "name":"SPSPH_031600 Methylaspartate ammonia-lyase\tK04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2]" }, { "name":"SPSPH_002240 putative FAD-linked oxidoreductase\tK00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]" }, { "name":"SPSPH_002260 putative FAD-linked oxidoreductase\tK00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]" }, { "name":"SPSPH_014210 putative FAD-linked oxidoreductase\tK00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]" }, { "name":"SPSPH_015160 putative FAD-linked oxidoreductase\tK00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]" }, { "name":"SPSPH_028690 hypothetical protein\tK00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]" }, { "name":"SPSPH_031710 putative FAD-linked oxidoreductase\tK00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]" }, { "name":"SPSPH_034530 putative FAD-linked oxidoreductase\tK00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]" }, { "name":"SPSPH_034550 putative FAD-linked oxidoreductase\tK00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]" }, { "name":"SPSPH_002250 lutA_1; (GenBank) Lactate utilization protein A\tK11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]" }, { "name":"SPSPH_014200 lutA_2; (GenBank) Lactate utilization protein A\tK11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]" }, { "name":"SPSPH_015150 lutA_3; (GenBank) Lactate utilization protein A\tK11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]" }, { "name":"SPSPH_031700 lutA_4; (GenBank) Lactate utilization protein A\tK11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]" }, { "name":"SPSPH_034540 lutA_5; (GenBank) Lactate utilization protein A\tK11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]" }, { "name":"SPSPH_011620 katA; (GenBank) Vegetative catalase\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"SPSPH_043550 katE; (GenBank) Catalase HPII\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"SPSPH_038630 5'-nucleotidase\tK01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]" }, { "name":"SPSPH_019730 hypothetical protein\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"SPSPH_033880 glyA_1; (GenBank) Serine hydroxymethyltransferase\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" }, { "name":"SPSPH_044630 glyA_2; (GenBank) Serine hydroxymethyltransferase\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" }, { "name":"SPSPH_023930 pdhD; (GenBank) Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SPSPH_028670 gcvH_1; (GenBank) Glycine cleavage system H protein\tK02437 gcvH; glycine cleavage system H protein" }, { "name":"SPSPH_028700 gcvH_2; (GenBank) Glycine cleavage system H protein\tK02437 gcvH; glycine cleavage system H protein" }, { "name":"SPSPH_031080 garR_2; (GenBank) 2-hydroxy-3-oxopropionate reductase\tK00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]" }, { "name":"SPSPH_030960 garK; (GenBank) Glycerate 2-kinase\tK00865 glxK; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"SPSPH_030820 hypothetical protein\tK00127 fdoI; formate dehydrogenase subunit gamma" } ] }, { "name":"00640 Propanoate metabolism [PATH:ssph00640]", "children":[ { "name":"SPSPH_001560 carA_1; (GenBank) Caffeate CoA-transferase\tK01026 pct; propionate CoA-transferase [EC:2.8.3.1]" }, { "name":"SPSPH_027140 carA_3; (GenBank) Caffeate CoA-transferase\tK01026 pct; propionate CoA-transferase [EC:2.8.3.1]" }, { "name":"SPSPH_041930 ydiF; (GenBank) Acetate CoA-transferase YdiF\tK01026 pct; propionate CoA-transferase [EC:2.8.3.1]" }, { "name":"SPSPH_016700 ackA; (GenBank) Acetate kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]" }, { "name":"SPSPH_010770 pduL_1; (GenBank) Phosphate propanoyltransferase\tK15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]" }, { "name":"SPSPH_021230 pduL_2; (GenBank) Phosphate propanoyltransferase\tK15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]" }, { "name":"SPSPH_023930 pdhD; (GenBank) Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SPSPH_012450 Oxalate oxidoreductase subunit delta\tK00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]" }, { "name":"SPSPH_034330 pflB; (GenBank) Formate acetyltransferase\tK00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]" }, { "name":"SPSPH_001540 bcd; (GenBank) Acyl-CoA dehydrogenase, short-chain specific\tK00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]" }, { "name":"SPSPH_007530 Acyl-CoA dehydrogenase, short-chain specific\tK00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]" }, { "name":"SPSPH_041870 Acyl-CoA dehydrogenase, short-chain specific\tK00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]" }, { "name":"SPSPH_022970 argD_2; (GenBank) Acetylornithine aminotransferase\tK00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]" }, { "name":"SPSPH_025750 davT; (GenBank) 5-aminovalerate aminotransferase DavT\tK00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]" }, { "name":"SPSPH_014530 epi; (GenBank) Ethylmalonyl-CoA\/methylmalonyl-CoA epimerase\tK05606 MCEE; methylmalonyl-CoA\/ethylmalonyl-CoA epimerase [EC:5.1.99.1]" }, { "name":"SPSPH_014510 mcm; (GenBank) Methylmalonyl-CoA mutase\tK01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]" }, { "name":"SPSPH_014500 bhbA; (GenBank) Methylmalonyl-CoA mutase\tK01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]" }, { "name":"SPSPH_040100 sucD; (GenBank) Succinate--CoA ligase [ADP-forming] subunit alpha\tK01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]" }, { "name":"SPSPH_040010 leuC_2; (GenBank) 3-isopropylmalate dehydratase large subunit\tK27802 acnA; aconitate hydratase A \/ 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]" }, { "name":"SPSPH_011130 ldh; (GenBank) L-lactate dehydrogenase\tK00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]" }, { "name":"SPSPH_042590 mgsA; (GenBank) Methylglyoxal synthase\tK01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]" }, { "name":"SPSPH_041760 dhaD_1; (GenBank) Glycerol dehydrogenase\tK00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]" }, { "name":"SPSPH_010700 dhaB; (GenBank) Glycerol dehydratase large subunit\tK01699 pduC; propanediol dehydratase large subunit [EC:4.2.1.28]" }, { "name":"SPSPH_010710 pduD; (GenBank) Propanediol dehydratase medium subunit\tK13919 pduD; propanediol dehydratase medium subunit [EC:4.2.1.28]" }, { "name":"SPSPH_010810 adhE_2; (GenBank) Aldehyde-alcohol dehydrogenase\tK13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87]" } ] }, { "name":"00650 Butanoate metabolism [PATH:ssph00650]", "children":[ { "name":"SPSPH_001550 thlA_1; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_007500 thlA_2; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_041940 thlA_3; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_001500 hbd_1; (GenBank) 3-hydroxybutyryl-CoA dehydrogenase\tK00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]" }, { "name":"SPSPH_007510 hbd_2; (GenBank) 3-hydroxybutyryl-CoA dehydrogenase\tK00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]" }, { "name":"SPSPH_041810 hbd_3; (GenBank) 3-hydroxybutyryl-CoA dehydrogenase\tK00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]" }, { "name":"SPSPH_041950 hbd_4; (GenBank) 3-hydroxybutyryl-CoA dehydrogenase\tK00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]" }, { "name":"SPSPH_007520 crt; (GenBank) Short-chain-enoyl-CoA hydratase\tK01715 crt; short-chain-enoyl-CoA hydratase [EC:4.2.1.150]" }, { "name":"SPSPH_041840 Crotonyl-CoA hydratase\tK01715 crt; short-chain-enoyl-CoA hydratase [EC:4.2.1.150]" }, { "name":"SPSPH_001540 bcd; (GenBank) Acyl-CoA dehydrogenase, short-chain specific\tK00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]" }, { "name":"SPSPH_007530 Acyl-CoA dehydrogenase, short-chain specific\tK00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]" }, { "name":"SPSPH_041870 Acyl-CoA dehydrogenase, short-chain specific\tK00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]" }, { "name":"SPSPH_000170 buk2_1; (GenBank) Butyrate kinase 2\tK00929 buk; butyrate kinase [EC:2.7.2.7]" }, { "name":"SPSPH_018240 buk2_2; (GenBank) Butyrate kinase 2\tK00929 buk; butyrate kinase [EC:2.7.2.7]" }, { "name":"SPSPH_031670 buk2_3; (GenBank) Butyrate kinase 2\tK00929 buk; butyrate kinase [EC:2.7.2.7]" }, { "name":"SPSPH_013700 pta_1; (GenBank) Phosphate acetyltransferase\tK00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]" }, { "name":"SPSPH_031680 pta_2; (GenBank) Phosphate acetyltransferase\tK00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]" }, { "name":"SPSPH_044550 bphJ; (GenBank) Acetaldehyde dehydrogenase 4\tK18366 bphJ; acetaldehyde\/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]" }, { "name":"SPSPH_001510 phaJ; (GenBank) (R)-specific enoyl-CoA hydratase\tK17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]" }, { "name":"SPSPH_000580 gcdB_1; (GenBank) Glutaconyl-CoA decarboxylase subunit beta\tK20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]" }, { "name":"SPSPH_014570 gcdB_2; (GenBank) Glutaconyl-CoA decarboxylase subunit beta\tK20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]" }, { "name":"SPSPH_014560 gcdC; (GenBank) Glutaconyl-CoA decarboxylase subunit gamma\tK23351 gcdC; glutaconyl-CoA\/methylmalonyl-CoA decarboxylase subunit gamma" }, { "name":"SPSPH_037050 sdhB_2; (GenBank) 8-methylmenaquinol:fumarate reductase iron-sulfur subunit\tK00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]" }, { "name":"SPSPH_037060 sdhE_2; (GenBank) 8-methylmenaquinol:fumarate reductase membrane anchor subunit\tK00241 sdhC; succinate dehydrogenase cytochrome b subunit" }, { "name":"SPSPH_022970 argD_2; (GenBank) Acetylornithine aminotransferase\tK00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]" }, { "name":"SPSPH_025750 davT; (GenBank) 5-aminovalerate aminotransferase DavT\tK00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]" }, { "name":"SPSPH_002340 cat1_1; (GenBank) Succinyl-CoA:coenzyme A transferase\tK18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]" }, { "name":"SPSPH_014490 cat1_2; (GenBank) Succinyl-CoA:coenzyme A transferase\tK18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]" }, { "name":"SPSPH_007400 Butyryl-CoA:acetate CoA-transferase\tK18122 cat2; 4-hydroxybutyrate CoA-transferase [EC:2.8.3.-]" }, { "name":"SPSPH_007470 abfD; (GenBank) 4-hydroxybutyryl-CoA dehydratase\/vinylacetyl-CoA-Delta-isomerase\tK14534 abfD; 4-hydroxybutyryl-CoA dehydratase \/ vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]" }, { "name":"SPSPH_034330 pflB; (GenBank) Formate acetyltransferase\tK00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]" }, { "name":"SPSPH_012450 Oxalate oxidoreductase subunit delta\tK00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]" }, { "name":"SPSPH_013160 Pyruvate:ferredoxin oxidoreductase\tK03737 por; pyruvate-ferredoxin\/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.8.1]" }, { "name":"SPSPH_034630 Pyruvate:ferredoxin oxidoreductase\tK03737 por; pyruvate-ferredoxin\/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.8.1]" }, { "name":"SPSPH_002280 korA_1; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_013240 korA_2; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_013720 padG; (GenBank) NADH-dependent phenylglyoxylate dehydrogenase subunit alpha\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_016040 korA_3; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_021210 korA_4; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_029550 korA_5; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_031760 korA_6; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_032010 korA_7; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_032120 korA_8; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_038190 hypothetical protein\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_002290 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_013250 korB_1; (GenBank) 2-oxoglutarate oxidoreductase subunit KorB\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_013730 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_016050 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_021200 korB_2; (GenBank) 2-oxoglutarate oxidoreductase subunit KorB\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_029540 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_031750 korB_3; (GenBank) 2-oxoglutarate oxidoreductase subunit KorB\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_032000 korB_4; (GenBank) 2-oxoglutarate oxidoreductase subunit KorB\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_032110 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_032150 yngG; (GenBank) Hydroxymethylglutaryl-CoA lyase YngG\tK01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]" }, { "name":"SPSPH_023360 ilvB_1; (GenBank) Acetolactate synthase isozyme 1 large subunit\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SPSPH_037740 ilvB_2; (GenBank) Acetolactate synthase large subunit\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SPSPH_042500 ilvB_3; (GenBank) Acetolactate synthase large subunit\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SPSPH_037730 ilvH_1; (GenBank) Putative acetolactate synthase small subunit\tK01653 E2.2.1.6S; acetolactate synthase I\/III small subunit [EC:2.2.1.6]" }, { "name":"SPSPH_042560 ilvH_2; (GenBank) Putative acetolactate synthase small subunit\tK01653 E2.2.1.6S; acetolactate synthase I\/III small subunit [EC:2.2.1.6]" }, { "name":"SPSPH_028820 ydjJ; (GenBank) putative zinc-type alcohol dehydrogenase-like protein YdjJ\tK00004 BDH; (R,R)-butanediol dehydrogenase \/ meso-butanediol dehydrogenase \/ diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]" }, { "name":"SPSPH_028810 fabG_3; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase\tK03366 butA; meso-butanediol dehydrogenase \/ (S,S)-butanediol dehydrogenase \/ diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]" } ] }, { "name":"00660 C5-Branched dibasic acid metabolism [PATH:ssph00660]", "children":[ { "name":"SPSPH_023360 ilvB_1; (GenBank) Acetolactate synthase isozyme 1 large subunit\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SPSPH_037740 ilvB_2; (GenBank) Acetolactate synthase large subunit\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SPSPH_042500 ilvB_3; (GenBank) Acetolactate synthase large subunit\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SPSPH_037730 ilvH_1; (GenBank) Putative acetolactate synthase small subunit\tK01653 E2.2.1.6S; acetolactate synthase I\/III small subunit [EC:2.2.1.6]" }, { "name":"SPSPH_042560 ilvH_2; (GenBank) Putative acetolactate synthase small subunit\tK01653 E2.2.1.6S; acetolactate synthase I\/III small subunit [EC:2.2.1.6]" }, { "name":"SPSPH_040100 sucD; (GenBank) Succinate--CoA ligase [ADP-forming] subunit alpha\tK01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]" }, { "name":"SPSPH_031600 Methylaspartate ammonia-lyase\tK04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2]" }, { "name":"SPSPH_031610 glmE; (GenBank) Glutamate mutase epsilon subunit\tK19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]" }, { "name":"SPSPH_031630 glmS_7; (GenBank) Glutamate mutase sigma subunit\tK01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]" }, { "name":"SPSPH_035200 leuC_1; (GenBank) 3-isopropylmalate dehydratase large subunit\tK01703 leuC; 3-isopropylmalate\/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]" }, { "name":"SPSPH_042530 dmdA; (GenBank) 2,3-dimethylmalate dehydratase large subunit\tK01703 leuC; 3-isopropylmalate\/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]" }, { "name":"SPSPH_035190 dmdB_1; (GenBank) 2,3-dimethylmalate dehydratase small subunit\tK01704 leuD; 3-isopropylmalate\/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]" }, { "name":"SPSPH_042520 dmdB_2; (GenBank) 2,3-dimethylmalate dehydratase small subunit\tK01704 leuD; 3-isopropylmalate\/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]" }, { "name":"SPSPH_042510 leuB; (GenBank) 3-isopropylmalate dehydrogenase\tK00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]" } ] }, { "name":"00562 Inositol phosphate metabolism [PATH:ssph00562]", "children":[ { "name":"SPSPH_003570 hypothetical protein\tK01114 plc; phospholipase C [EC:3.1.4.3]" }, { "name":"SPSPH_030280 tpiA; (GenBank) Triosephosphate isomerase\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]" } ] }, { "name":"00566 Sulfoquinovose metabolism", "children":[ { "name":"SPSPH_029610 hpdA; (GenBank) 4-hydroxyphenylacetate decarboxylase activating enzyme\tK25265 hpsH; (2S)-3-sulfopropanediol sulfolyase activating enzyme" } ] } ] }, { "name":"09102 Energy metabolism", "children":[ { "name":"00190 Oxidative phosphorylation [PATH:ssph00190]", "children":[ { "name":"SPSPH_014330 hypothetical protein\tK00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]" }, { "name":"SPSPH_007550 hndC_1; (GenBank) NADP-reducing hydrogenase subunit HndC\tK00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]" }, { "name":"SPSPH_009210 hndC_2; (GenBank) NADP-reducing hydrogenase subunit HndC\tK00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]" }, { "name":"SPSPH_014010 hndC_3; (GenBank) NADP-reducing hydrogenase subunit HndC\tK00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]" }, { "name":"SPSPH_014360 hndC_4; (GenBank) NADP-reducing hydrogenase subunit HndC\tK00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]" }, { "name":"SPSPH_037050 sdhB_2; (GenBank) 8-methylmenaquinol:fumarate reductase iron-sulfur subunit\tK00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]" }, { "name":"SPSPH_037060 sdhE_2; (GenBank) 8-methylmenaquinol:fumarate reductase membrane anchor subunit\tK00241 sdhC; succinate dehydrogenase cytochrome b subunit" }, { "name":"SPSPH_001200 cydA_1; (GenBank) Cytochrome bd ubiquinol oxidase subunit 1\tK00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]" }, { "name":"SPSPH_025990 cydA_2; (GenBank) Cytochrome bd ubiquinol oxidase subunit 1\tK00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]" }, { "name":"SPSPH_001210 cydB_1; (GenBank) Cytochrome bd-I ubiquinol oxidase subunit 2\tK00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]" }, { "name":"SPSPH_026000 cydB_2; (GenBank) Cytochrome bd-I ubiquinol oxidase subunit 2\tK00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]" }, { "name":"SPSPH_033760 atpA_1; (GenBank) ATP synthase subunit alpha\tK02111 ATPF1A; F-type H+\/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]" }, { "name":"SPSPH_039050 atpA_2; (GenBank) ATP synthase subunit alpha\tK02111 ATPF1A; F-type H+\/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]" }, { "name":"SPSPH_033740 atpD_1; (GenBank) ATP synthase subunit beta\tK02112 ATPF1B; F-type H+\/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]" }, { "name":"SPSPH_039030 atpD_2; (GenBank) ATP synthase subunit beta\tK02112 ATPF1B; F-type H+\/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]" }, { "name":"SPSPH_033750 atpG_1; (GenBank) ATP synthase gamma chain\tK02115 ATPF1G; F-type H+-transporting ATPase subunit gamma" }, { "name":"SPSPH_039040 atpG_2; (GenBank) ATP synthase gamma chain\tK02115 ATPF1G; F-type H+-transporting ATPase subunit gamma" }, { "name":"SPSPH_033770 atpH_1; (GenBank) ATP synthase subunit delta\tK02113 ATPF1D; F-type H+-transporting ATPase subunit delta" }, { "name":"SPSPH_039060 atpH_2; (GenBank) ATP synthase subunit delta\tK02113 ATPF1D; F-type H+-transporting ATPase subunit delta" }, { "name":"SPSPH_033730 atpC_1; (GenBank) ATP synthase epsilon chain\tK02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon" }, { "name":"SPSPH_039020 atpC_2; (GenBank) ATP synthase epsilon chain\tK02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon" }, { "name":"SPSPH_033800 atpB_1; (GenBank) ATP synthase subunit a\tK02108 ATPF0A; F-type H+-transporting ATPase subunit a" }, { "name":"SPSPH_039090 atpB_2; (GenBank) ATP synthase subunit a\tK02108 ATPF0A; F-type H+-transporting ATPase subunit a" }, { "name":"SPSPH_033780 atpF_1; (GenBank) ATP synthase subunit b, sodium ion specific\tK02109 ATPF0B; F-type H+-transporting ATPase subunit b" }, { "name":"SPSPH_039070 atpF_2; (GenBank) ATP synthase subunit b, sodium ion specific\tK02109 ATPF0B; F-type H+-transporting ATPase subunit b" }, { "name":"SPSPH_033790 atpE_1; (GenBank) ATP synthase subunit c, sodium ion specific\tK02110 ATPF0C; F-type H+-transporting ATPase subunit c" }, { "name":"SPSPH_039080 atpE_2; (GenBank) ATP synthase subunit c\tK02110 ATPF0C; F-type H+-transporting ATPase subunit c" }, { "name":"SPSPH_023170 Cobalt-dependent inorganic pyrophosphatase\tK15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]" }, { "name":"SPSPH_021300 ppaX; (GenBank) Pyrophosphatase PpaX\tK06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1]" }, { "name":"SPSPH_043650 ppk; (GenBank) Polyphosphate kinase\tK00937 ppk1; polyphosphate kinase [EC:2.7.4.1]" } ] }, { "name":"00195 Photosynthesis" }, { "name":"00196 Photosynthesis - antenna proteins" }, { "name":"00710 Carbon fixation by Calvin cycle [PATH:ssph00710]", "children":[ { "name":"SPSPH_030290 pgk; (GenBank) Phosphoglycerate kinase\tK00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]" }, { "name":"SPSPH_030300 gap; (GenBank) Glyceraldehyde-3-phosphate dehydrogenase\tK00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]" }, { "name":"SPSPH_043880 lsrF; (GenBank) 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase\tK11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]" }, { "name":"SPSPH_019950 gatY; (GenBank) D-tagatose-1,6-bisphosphate aldolase subunit GatY\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"SPSPH_024140 fba; (GenBank) Fructose-bisphosphate aldolase\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"SPSPH_040130 kbaY; (GenBank) D-tagatose-1,6-bisphosphate aldolase subunit KbaY\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"SPSPH_002690 glpX; (GenBank) Fructose-1,6-bisphosphatase class 2\tK02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]" }, { "name":"SPSPH_030740 aptB; (GenBank) Apulose-4-phosphate transketolase subunit B\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"SPSPH_030750 aptA; (GenBank) Apulose-4-phosphate transketolase subunit A\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"SPSPH_033900 ywlF; (GenBank) Putative sugar phosphate isomerase YwlF\tK01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]" }, { "name":"SPSPH_030280 tpiA; (GenBank) Triosephosphate isomerase\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]" }, { "name":"SPSPH_021580 rpe; (GenBank) Ribulose-phosphate 3-epimerase\tK01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]" }, { "name":"SPSPH_002680 tal; (GenBank) Transaldolase\tK00616 TALDO1; transaldolase [EC:2.2.1.2]" }, { "name":"SPSPH_024640 pckA; (GenBank) Phosphoenolpyruvate carboxykinase (ATP)\tK01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]" }, { "name":"SPSPH_012230 ppdK; (GenBank) Pyruvate, phosphate dikinase\tK01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]" } ] }, { "name":"00720 Other carbon fixation pathways [PATH:ssph00720]", "children":[ { "name":"SPSPH_012450 Oxalate oxidoreductase subunit delta\tK00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]" }, { "name":"SPSPH_013160 Pyruvate:ferredoxin oxidoreductase\tK03737 por; pyruvate-ferredoxin\/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.8.1]" }, { "name":"SPSPH_034630 Pyruvate:ferredoxin oxidoreductase\tK03737 por; pyruvate-ferredoxin\/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.8.1]" }, { "name":"SPSPH_012230 ppdK; (GenBank) Pyruvate, phosphate dikinase\tK01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]" }, { "name":"SPSPH_012540 pycA; (GenBank) Pyruvate carboxylase\tK01958 PC; pyruvate carboxylase [EC:6.4.1.1]" }, { "name":"SPSPH_031540 ttdA; (GenBank) L(+)-tartrate dehydratase subunit alpha\tK01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]" }, { "name":"SPSPH_031530 fumA; (GenBank) Fumarate hydratase class I, aerobic\tK01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]" }, { "name":"SPSPH_037050 sdhB_2; (GenBank) 8-methylmenaquinol:fumarate reductase iron-sulfur subunit\tK00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]" }, { "name":"SPSPH_037060 sdhE_2; (GenBank) 8-methylmenaquinol:fumarate reductase membrane anchor subunit\tK00241 sdhC; succinate dehydrogenase cytochrome b subunit" }, { "name":"SPSPH_040100 sucD; (GenBank) Succinate--CoA ligase [ADP-forming] subunit alpha\tK01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]" }, { "name":"SPSPH_007470 abfD; (GenBank) 4-hydroxybutyryl-CoA dehydratase\/vinylacetyl-CoA-Delta-isomerase\tK14534 abfD; 4-hydroxybutyryl-CoA dehydratase \/ vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]" }, { "name":"SPSPH_001550 thlA_1; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_007500 thlA_2; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_041940 thlA_3; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_002280 korA_1; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_013240 korA_2; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_013720 padG; (GenBank) NADH-dependent phenylglyoxylate dehydrogenase subunit alpha\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_016040 korA_3; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_021210 korA_4; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_029550 korA_5; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_031760 korA_6; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_032010 korA_7; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_032120 korA_8; (GenBank) 2-oxoglutarate oxidoreductase subunit KorA\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_038190 hypothetical protein\tK00174 korA; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_002290 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_013250 korB_1; (GenBank) 2-oxoglutarate oxidoreductase subunit KorB\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_013730 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_016050 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_021200 korB_2; (GenBank) 2-oxoglutarate oxidoreductase subunit KorB\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_029540 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_031750 korB_3; (GenBank) 2-oxoglutarate oxidoreductase subunit KorB\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_032000 korB_4; (GenBank) 2-oxoglutarate oxidoreductase subunit KorB\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_032110 hypothetical protein\tK00175 korB; 2-oxoglutarate\/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]" }, { "name":"SPSPH_002300 padE_1; (GenBank) NADH-dependent phenylglyoxylate dehydrogenase subunit gamma\tK00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]" }, { "name":"SPSPH_013260 hypothetical protein\tK00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]" }, { "name":"SPSPH_016060 padE_3; (GenBank) NADH-dependent phenylglyoxylate dehydrogenase subunit gamma\tK00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]" }, { "name":"SPSPH_021190 porC_1; (GenBank) Pyruvate synthase subunit PorC\tK00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]" }, { "name":"SPSPH_029530 hypothetical protein\tK00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]" }, { "name":"SPSPH_031740 hypothetical protein\tK00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]" }, { "name":"SPSPH_031990 porC_2; (GenBank) Pyruvate synthase subunit PorC\tK00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]" }, { "name":"SPSPH_032100 porC_3; (GenBank) Pyruvate synthase subunit PorC\tK00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]" }, { "name":"SPSPH_038170 hypothetical protein\tK00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]" }, { "name":"SPSPH_002270 hypothetical protein\tK00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]" }, { "name":"SPSPH_013230 hypothetical protein\tK00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]" }, { "name":"SPSPH_013750 hypothetical protein\tK00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]" }, { "name":"SPSPH_016030 hypothetical protein\tK00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]" }, { "name":"SPSPH_021220 ndhI_2; (GenBank) NAD(P)H-quinone oxidoreductase subunit I, chloroplastic\tK00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]" }, { "name":"SPSPH_031770 rsxB_3; (GenBank) Ion-translocating oxidoreductase complex subunit B\tK00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]" }, { "name":"SPSPH_032020 rsxB_4; (GenBank) Ion-translocating oxidoreductase complex subunit B\tK00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]" }, { "name":"SPSPH_032130 rsxB_5; (GenBank) Ion-translocating oxidoreductase complex subunit B\tK00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]" }, { "name":"SPSPH_038200 rsxB_6; (GenBank) Ion-translocating oxidoreductase complex subunit B\tK00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]" }, { "name":"SPSPH_040010 leuC_2; (GenBank) 3-isopropylmalate dehydratase large subunit\tK27802 acnA; aconitate hydratase A \/ 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]" }, { "name":"SPSPH_014530 epi; (GenBank) Ethylmalonyl-CoA\/methylmalonyl-CoA epimerase\tK05606 MCEE; methylmalonyl-CoA\/ethylmalonyl-CoA epimerase [EC:5.1.99.1]" }, { "name":"SPSPH_014500 bhbA; (GenBank) Methylmalonyl-CoA mutase\tK01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]" }, { "name":"SPSPH_014510 mcm; (GenBank) Methylmalonyl-CoA mutase\tK01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]" }, { "name":"SPSPH_014220 fdhF_5; (GenBank) Formate dehydrogenase H\tK05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10]" }, { "name":"SPSPH_014130 fdhF_2; (GenBank) Formate dehydrogenase H\tK22015 fdhF; formate dehydrogenase (hydrogenase) \/ hydrogen-dependent carbon dioxide reductase [EC:1.17.98.4 1.17.98.5]" }, { "name":"SPSPH_014150 fdhF_4; (GenBank) Formate dehydrogenase H\tK22015 fdhF; formate dehydrogenase (hydrogenase) \/ hydrogen-dependent carbon dioxide reductase [EC:1.17.98.4 1.17.98.5]" }, { "name":"SPSPH_014170 Iron hydrogenase 1\tK25123 hydA2; iron hydrogenase HydA2 [EC:1.12.7.-]" }, { "name":"SPSPH_014160 hyfA; (GenBank) Hydrogenase-4 component A\tK25124 hycB; FeS-containing electron transfer protein" }, { "name":"SPSPH_014180 cooF; (GenBank) Iron-sulfur protein\tK25124 hycB; FeS-containing electron transfer protein" }, { "name":"SPSPH_002200 fhs_1; (GenBank) Formate--tetrahydrofolate ligase\tK01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]" }, { "name":"SPSPH_013860 fhs_2; (GenBank) Formate--tetrahydrofolate ligase\tK01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]" }, { "name":"SPSPH_013830 folD; (GenBank) Bifunctional protein FolD protein\tK01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) \/ methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]" }, { "name":"SPSPH_003200 fchA_1; (GenBank) Methenyltetrahydrofolate cyclohydrolase\tK01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]" }, { "name":"SPSPH_013220 fchA_2; (GenBank) Methenyltetrahydrofolate cyclohydrolase\tK01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]" }, { "name":"SPSPH_013820 fchA_3; (GenBank) Methenyltetrahydrofolate cyclohydrolase\tK01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]" }, { "name":"SPSPH_039250 hypothetical protein\tK01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]" }, { "name":"SPSPH_040910 hypothetical protein\tK01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]" }, { "name":"SPSPH_008840 hypothetical protein\tK00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]" }, { "name":"SPSPH_013990 yitJ; (GenBank) Bifunctional homocysteine S-methyltransferase\/5,10-methylenetetrahydrofolate reductase\tK00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]" }, { "name":"SPSPH_043820 hypothetical protein\tK00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]" }, { "name":"SPSPH_000490 acsE_1; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK15023 acsE; 5-methyltetrahydrofolate corrinoid\/iron sulfur protein methyltransferase [EC:2.1.1.258]" }, { "name":"SPSPH_013930 acsE_4; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK15023 acsE; 5-methyltetrahydrofolate corrinoid\/iron sulfur protein methyltransferase [EC:2.1.1.258]" }, { "name":"SPSPH_036210 acsE_11; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK15023 acsE; 5-methyltetrahydrofolate corrinoid\/iron sulfur protein methyltransferase [EC:2.1.1.258]" }, { "name":"SPSPH_008890 mtgA_2; (GenBank) Methylcorrinoid:tetrahydrofolate methyltransferase\tK25221 mtgA; [methyl-Co(III) glycine betaine-specific corrinoid protein]---tetrahydrofolate methyltransferase [EC:2.1.1.378]" }, { "name":"SPSPH_008210 cooS1_1; (GenBank) Carbon monoxide dehydrogenase 1\tK00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]" }, { "name":"SPSPH_010530 cooS1_2; (GenBank) Carbon monoxide dehydrogenase 1\tK00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]" }, { "name":"SPSPH_013870 Carbon monoxide dehydrogenase\/acetyl-CoA synthase subunit beta\tK00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]" }, { "name":"SPSPH_008490 Carbon monoxide dehydrogenase\/acetyl-CoA synthase subunit alpha\tK14138 acsB; acetyl-CoA synthase [EC:2.3.1.169]" }, { "name":"SPSPH_013880 Carbon monoxide dehydrogenase\/acetyl-CoA synthase subunit alpha\tK14138 acsB; acetyl-CoA synthase [EC:2.3.1.169]" }, { "name":"SPSPH_013890 acsC; (GenBank) Corrinoid\/iron-sulfur protein large subunit\tK00197 cdhE; acetyl-CoA decarbonylase\/synthase, CODH\/ACS complex subunit gamma [EC:2.1.1.245]" }, { "name":"SPSPH_013920 acsD; (GenBank) Corrinoid\/iron-sulfur protein small subunit\tK00194 cdhD; acetyl-CoA decarbonylase\/synthase, CODH\/ACS complex subunit delta [EC:2.1.1.245]" }, { "name":"SPSPH_010770 pduL_1; (GenBank) Phosphate propanoyltransferase\tK15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]" }, { "name":"SPSPH_021230 pduL_2; (GenBank) Phosphate propanoyltransferase\tK15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]" }, { "name":"SPSPH_016700 ackA; (GenBank) Acetate kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]" } ] }, { "name":"00680 Methane metabolism [PATH:ssph00680]", "children":[ { "name":"SPSPH_030820 hypothetical protein\tK00127 fdoI; formate dehydrogenase subunit gamma" }, { "name":"SPSPH_014220 fdhF_5; (GenBank) Formate dehydrogenase H\tK05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10]" }, { "name":"SPSPH_014130 fdhF_2; (GenBank) Formate dehydrogenase H\tK22015 fdhF; formate dehydrogenase (hydrogenase) \/ hydrogen-dependent carbon dioxide reductase [EC:1.17.98.4 1.17.98.5]" }, { "name":"SPSPH_014150 fdhF_4; (GenBank) Formate dehydrogenase H\tK22015 fdhF; formate dehydrogenase (hydrogenase) \/ hydrogen-dependent carbon dioxide reductase [EC:1.17.98.4 1.17.98.5]" }, { "name":"SPSPH_014170 Iron hydrogenase 1\tK25123 hydA2; iron hydrogenase HydA2 [EC:1.12.7.-]" }, { "name":"SPSPH_014160 hyfA; (GenBank) Hydrogenase-4 component A\tK25124 hycB; FeS-containing electron transfer protein" }, { "name":"SPSPH_014180 cooF; (GenBank) Iron-sulfur protein\tK25124 hycB; FeS-containing electron transfer protein" }, { "name":"SPSPH_013890 acsC; (GenBank) Corrinoid\/iron-sulfur protein large subunit\tK00197 cdhE; acetyl-CoA decarbonylase\/synthase, CODH\/ACS complex subunit gamma [EC:2.1.1.245]" }, { "name":"SPSPH_013920 acsD; (GenBank) Corrinoid\/iron-sulfur protein small subunit\tK00194 cdhD; acetyl-CoA decarbonylase\/synthase, CODH\/ACS complex subunit delta [EC:2.1.1.245]" }, { "name":"SPSPH_008210 cooS1_1; (GenBank) Carbon monoxide dehydrogenase 1\tK00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]" }, { "name":"SPSPH_010530 cooS1_2; (GenBank) Carbon monoxide dehydrogenase 1\tK00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]" }, { "name":"SPSPH_013870 Carbon monoxide dehydrogenase\/acetyl-CoA synthase subunit beta\tK00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]" }, { "name":"SPSPH_033880 glyA_1; (GenBank) Serine hydroxymethyltransferase\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" }, { "name":"SPSPH_044630 glyA_2; (GenBank) Serine hydroxymethyltransferase\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" }, { "name":"SPSPH_030260 eno; (GenBank) Enolase\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]" }, { "name":"SPSPH_043880 lsrF; (GenBank) 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase\tK11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]" }, { "name":"SPSPH_019950 gatY; (GenBank) D-tagatose-1,6-bisphosphate aldolase subunit GatY\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"SPSPH_024140 fba; (GenBank) Fructose-bisphosphate aldolase\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"SPSPH_040130 kbaY; (GenBank) D-tagatose-1,6-bisphosphate aldolase subunit KbaY\tK01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]" }, { "name":"SPSPH_002690 glpX; (GenBank) Fructose-1,6-bisphosphatase class 2\tK02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]" }, { "name":"SPSPH_007580 pfkA; (GenBank) ATP-dependent 6-phosphofructokinase\tK00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]" }, { "name":"SPSPH_004390 pfp; (GenBank) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase\tK21071 pfk; ATP-dependent phosphofructokinase \/ diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]" }, { "name":"SPSPH_038670 hypothetical protein\tK22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21]" }, { "name":"SPSPH_006130 hypothetical protein\tK11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12]" }, { "name":"SPSPH_036460 hypothetical protein\tK11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12]" }, { "name":"SPSPH_013950 sdhE_1; (GenBank) 8-methylmenaquinol:fumarate reductase membrane anchor subunit\tK03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]" }, { "name":"SPSPH_013940 hypothetical protein\tK03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]" }, { "name":"SPSPH_028680 fadF; (GenBank) putative iron-sulfur-binding oxidoreductase FadF\tK08264 hdrD; heterodisulfide reductase subunit D [EC:1.8.98.1]" }, { "name":"SPSPH_013970 hypothetical protein\tK14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]" }, { "name":"SPSPH_016700 ackA; (GenBank) Acetate kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]" }, { "name":"SPSPH_012450 Oxalate oxidoreductase subunit delta\tK00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]" }, { "name":"SPSPH_030270 gpmI_2; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase\tK15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]" }, { "name":"SPSPH_008730 apgM_1; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase\tK15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]" }, { "name":"SPSPH_038920 apgM_2; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase\tK15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]" }, { "name":"SPSPH_002230 serA; (GenBank) D-3-phosphoglycerate dehydrogenase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"SPSPH_042200 serC; (GenBank) Phosphoserine aminotransferase\tK00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]" }, { "name":"SPSPH_016240 pspA_1; (GenBank) Phosphoserine phosphatase 1\tK22305 psp; phosphoserine phosphatase [EC:3.1.3.3]" }, { "name":"SPSPH_042190 pspA_2; (GenBank) Phosphoserine phosphatase 1\tK22305 psp; phosphoserine phosphatase [EC:3.1.3.3]" }, { "name":"SPSPH_029040 hypothetical protein\tK04480 mtaB; methanol---5-hydroxybenzimidazolylcobamide Co-methyltransferase [EC:2.1.1.90]" }, { "name":"SPSPH_037530 mtgB_9; (GenBank) Glycine betaine methyltransferase\tK14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]" }, { "name":"SPSPH_008910 metH_4; (GenBank) Methionine synthase\tK14084 mttC; trimethylamine corrinoid protein" }, { "name":"SPSPH_029890 corrinoid protein\tK14084 mttC; trimethylamine corrinoid protein" }, { "name":"SPSPH_029930 methyltransferase cognate corrinoid protein\tK14084 mttC; trimethylamine corrinoid protein" }, { "name":"SPSPH_029870 monomethylamine:corrinoid methyltransferase\tK16176 mtmB; methylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.248]" }, { "name":"SPSPH_008670 metH_2; (GenBank) Methionine synthase\tK16179 mtbC; dimethylamine corrinoid protein" }, { "name":"SPSPH_008780 metH_3; (GenBank) Methionine synthase\tK16179 mtbC; dimethylamine corrinoid protein" }, { "name":"SPSPH_009600 glmS_3; (GenBank) Glutamate mutase sigma subunit\tK16179 mtbC; dimethylamine corrinoid protein" }, { "name":"SPSPH_042950 metH_17; (GenBank) Methionine synthase\tK16179 mtbC; dimethylamine corrinoid protein" }, { "name":"SPSPH_019760 comB; (GenBank) putative 2-phosphosulfolactate phosphatase\tK05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]" } ] }, { "name":"00910 Nitrogen metabolism [PATH:ssph00910]", "children":[ { "name":"SPSPH_008690 nrtD_2; (GenBank) Nitrate import ATP-binding protein NrtD\tK15579 nrtD; nitrate\/nitrite transport system ATP-binding protein" }, { "name":"SPSPH_009500 nrtD_3; (GenBank) Nitrate import ATP-binding protein NrtD\tK15579 nrtD; nitrate\/nitrite transport system ATP-binding protein" }, { "name":"SPSPH_015410 nrfA_1; (GenBank) Cytochrome c nitrite reductase subunit NrfA\tK03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]" }, { "name":"SPSPH_034190 nrfA_2; (GenBank) Cytochrome c nitrite reductase subunit NrfA\tK03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]" }, { "name":"SPSPH_015400 Cytochrome c nitrite reductase subunit NrfH\tK15876 nrfH; cytochrome c nitrite reductase small subunit" }, { "name":"SPSPH_034200 nrfH; (GenBank) Cytochrome c-type protein NrfH\tK15876 nrfH; cytochrome c nitrite reductase small subunit" }, { "name":"SPSPH_043470 hypothetical protein\tK04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]" }, { "name":"SPSPH_043480 hypothetical protein\tK02305 norC; nitric oxide reductase subunit C" }, { "name":"SPSPH_009570 bchB_2; (GenBank) Light-independent protochlorophyllide reductase subunit B\tK02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]" }, { "name":"SPSPH_009970 nifD_1; (GenBank) Nitrogenase molybdenum-iron protein alpha chain\tK02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]" }, { "name":"SPSPH_041440 nifD_3; (GenBank) Nitrogenase molybdenum-iron protein alpha chain\tK02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]" }, { "name":"SPSPH_009580 nifK_1; (GenBank) Nitrogenase molybdenum-iron protein beta chain\tK02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]" }, { "name":"SPSPH_009960 nifK_2; (GenBank) Nitrogenase molybdenum-iron protein beta chain\tK02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]" }, { "name":"SPSPH_041410 nifK_3; (GenBank) Nitrogenase molybdenum-iron protein beta chain\tK02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]" }, { "name":"SPSPH_041430 nifK_4; (GenBank) Nitrogenase molybdenum-iron protein beta chain\tK02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]" }, { "name":"SPSPH_006990 nifH1_1; (GenBank) Nitrogenase iron protein 1\tK02588 nifH; nitrogenase iron protein NifH" }, { "name":"SPSPH_010080 nifH1_2; (GenBank) Nitrogenase iron protein 1\tK02588 nifH; nitrogenase iron protein NifH" }, { "name":"SPSPH_028120 nifH1_3; (GenBank) Nitrogenase iron protein 1\tK02588 nifH; nitrogenase iron protein NifH" }, { "name":"SPSPH_038840 nifH1_4; (GenBank) Nitrogenase iron protein 1\tK02588 nifH; nitrogenase iron protein NifH" }, { "name":"SPSPH_041470 nifH1_5; (GenBank) Nitrogenase iron protein 1\tK02588 nifH; nitrogenase iron protein NifH" }, { "name":"SPSPH_005410 hcp_1; (GenBank) Hydroxylamine reductase\tK05601 hcp; hydroxylamine reductase [EC:1.7.99.1]" }, { "name":"SPSPH_040950 hcp_2; (GenBank) Hydroxylamine reductase\tK05601 hcp; hydroxylamine reductase [EC:1.7.99.1]" }, { "name":"SPSPH_016800 NADH:quinone reductase\tK00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]" }, { "name":"SPSPH_025420 gdh_1; (GenBank) NAD-specific glutamate dehydrogenase\tK00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]" }, { "name":"SPSPH_038660 gdh_2; (GenBank) NADP-specific glutamate dehydrogenase\tK00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]" }, { "name":"SPSPH_019730 hypothetical protein\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"SPSPH_046370 hypothetical protein\tK00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]" }, { "name":"SPSPH_002420 gltD; (GenBank) Glutamate synthase [NADPH] small chain\tK00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]" }, { "name":"SPSPH_035630 arcC1; (GenBank) Carbamate kinase 1\tK00926 arcC; carbamate kinase [EC:2.7.2.2]" }, { "name":"SPSPH_012390 hypothetical protein\tK01673 cynT; carbonic anhydrase [EC:4.2.1.1]" }, { "name":"SPSPH_039860 hypothetical protein\tK01673 cynT; carbonic anhydrase [EC:4.2.1.1]" }, { "name":"SPSPH_022110 yrdA_2; (GenBank) Protein YrdA\tK28956 E4.2.1.1; carbonic anhydrase [EC:4.2.1.1]" } ] }, { "name":"00920 Sulfur metabolism [PATH:ssph00920]", "children":[ { "name":"SPSPH_008400 sbp; (GenBank) Sulfate-binding protein\tK23163 sbp; sulfate\/thiosulfate transport system substrate-binding protein" }, { "name":"SPSPH_008410 cysT; (GenBank) Sulfate transport system permease protein CysT\tK02046 cysU; sulfate\/thiosulfate transport system permease protein" }, { "name":"SPSPH_008420 cysW; (GenBank) Sulfate transport system permease protein CysW\tK02047 cysW; sulfate\/thiosulfate transport system permease protein" }, { "name":"SPSPH_008430 cysA; (GenBank) Sulfate\/thiosulfate import ATP-binding protein CysA\tK02045 cysA; sulfate\/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]" }, { "name":"SPSPH_029640 tauA; (GenBank) Taurine-binding periplasmic protein\tK15551 tauA; taurine transport system substrate-binding protein" }, { "name":"SPSPH_029650 ssuC_7; (GenBank) Putative aliphatic sulfonates transport permease protein SsuC\tK15552 tauC; taurine transport system permease protein" }, { "name":"SPSPH_008620 hypothetical protein\tK15553 ssuA; sulfonate transport system substrate-binding protein" }, { "name":"SPSPH_008640 hypothetical protein\tK15553 ssuA; sulfonate transport system substrate-binding protein" }, { "name":"SPSPH_008700 hypothetical protein\tK15553 ssuA; sulfonate transport system substrate-binding protein" }, { "name":"SPSPH_009510 hypothetical protein\tK15553 ssuA; sulfonate transport system substrate-binding protein" }, { "name":"SPSPH_009940 hypothetical protein\tK15553 ssuA; sulfonate transport system substrate-binding protein" }, { "name":"SPSPH_029580 ssuA_3; (GenBank) Putative aliphatic sulfonates-binding protein\tK15553 ssuA; sulfonate transport system substrate-binding protein" }, { "name":"SPSPH_008600 hypothetical protein\tK15554 ssuC; sulfonate transport system permease protein" }, { "name":"SPSPH_008650 ssuC_2; (GenBank) Putative aliphatic sulfonates transport permease protein SsuC\tK15554 ssuC; sulfonate transport system permease protein" }, { "name":"SPSPH_008710 hypothetical protein\tK15554 ssuC; sulfonate transport system permease protein" }, { "name":"SPSPH_009490 cmpB; (GenBank) Bicarbonate transport system permease protein CmpB\tK15554 ssuC; sulfonate transport system permease protein" }, { "name":"SPSPH_009920 hypothetical protein\tK15554 ssuC; sulfonate transport system permease protein" }, { "name":"SPSPH_029600 ssuC_6; (GenBank) Putative aliphatic sulfonates transport permease protein SsuC\tK15554 ssuC; sulfonate transport system permease protein" }, { "name":"SPSPH_008610 ssuB_2; (GenBank) Aliphatic sulfonates import ATP-binding protein SsuB\tK15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]" }, { "name":"SPSPH_009930 ssuB_3; (GenBank) Aliphatic sulfonates import ATP-binding protein SsuB\tK15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]" }, { "name":"SPSPH_029590 ssuB_5; (GenBank) Aliphatic sulfonates import ATP-binding protein SsuB\tK15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]" }, { "name":"SPSPH_029630 tauB; (GenBank) Taurine import ATP-binding protein TauB\tK15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]" }, { "name":"SPSPH_008470 cysN; (GenBank) Sulfate adenylyltransferase subunit 1\tK00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]" }, { "name":"SPSPH_008460 cysD; (GenBank) Sulfate adenylyltransferase subunit 2\tK00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]" }, { "name":"SPSPH_017770 nrnA; (GenBank) Bifunctional oligoribonuclease and PAP phosphatase NrnA\tK06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]" }, { "name":"SPSPH_008440 aprA; (GenBank) Adenylylsulfate reductase subunit alpha\tK00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]" }, { "name":"SPSPH_008450 hypothetical protein\tK00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2]" }, { "name":"SPSPH_041650 asrA; (GenBank) Anaerobic sulfite reductase subunit A\tK16950 asrA; anaerobic sulfite reductase subunit A" }, { "name":"SPSPH_041640 asrB; (GenBank) Anaerobic sulfite reductase subunit B\tK16951 asrB; anaerobic sulfite reductase subunit B" }, { "name":"SPSPH_041630 asrC_2; (GenBank) Anaerobic sulfite reductase subunit C\tK00385 asrC; anaerobic sulfite reductase subunit C" }, { "name":"SPSPH_004280 cysE; (GenBank) Serine acetyltransferase\tK00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]" }, { "name":"SPSPH_010100 cysK1_1; (GenBank) O-acetylserine sulfhydrylase\tK01738 cysK; cysteine synthase [EC:2.5.1.47]" }, { "name":"SPSPH_010180 cysK1_2; (GenBank) O-acetylserine sulfhydrylase\tK01738 cysK; cysteine synthase [EC:2.5.1.47]" }, { "name":"SPSPH_012820 metAA; (GenBank) Homoserine O-acetyltransferase\tK00651 metA; homoserine O-succinyltransferase\/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]" }, { "name":"SPSPH_010460 metXA; (GenBank) Homoserine O-acetyltransferase\tK00641 metX; homoserine O-acetyltransferase\/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]" }, { "name":"SPSPH_010140 mccB; (GenBank) Cystathionine gamma-lyase\tK01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]" } ] } ] }, { "name":"09103 Lipid metabolism", "children":[ { "name":"00061 Fatty acid biosynthesis [PATH:ssph00061]", "children":[ { "name":"SPSPH_016790 acpP_1; (GenBank) Acyl carrier protein\tK02078 acpP; acyl carrier protein" }, { "name":"SPSPH_045720 acpP_2; (GenBank) Acyl carrier protein\tK02078 acpP; acyl carrier protein" }, { "name":"SPSPH_016770 fabD; (GenBank) Malonyl CoA-acyl carrier protein transacylase\tK00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]" }, { "name":"SPSPH_000100 fabHA_1; (GenBank) 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1\tK00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]" }, { "name":"SPSPH_016750 fabHA_2; (GenBank) 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1\tK00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]" }, { "name":"SPSPH_016810 fabF; (GenBank) 3-oxoacyl-[acyl-carrier-protein] synthase 2\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"SPSPH_001590 fabG_1; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase FabG\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SPSPH_005640 fabG2; (GenBank) putative oxidoreductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SPSPH_016780 fabG_2; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SPSPH_033360 fabZ; (GenBank) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ\tK02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]" }, { "name":"SPSPH_004040 NADH:quinone reductase\tK02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]" }, { "name":"SPSPH_016760 NADH:quinone reductase\tK02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]" }, { "name":"SPSPH_012840 lcfB; (GenBank) Long-chain-fatty-acid--CoA ligase\tK01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]" } ] }, { "name":"00062 Fatty acid elongation" }, { "name":"00071 Fatty acid degradation [PATH:ssph00071]", "children":[ { "name":"SPSPH_001550 thlA_1; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_007500 thlA_2; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_041940 thlA_3; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_001540 bcd; (GenBank) Acyl-CoA dehydrogenase, short-chain specific\tK00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]" }, { "name":"SPSPH_007530 Acyl-CoA dehydrogenase, short-chain specific\tK00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]" }, { "name":"SPSPH_041870 Acyl-CoA dehydrogenase, short-chain specific\tK00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]" }, { "name":"SPSPH_012840 lcfB; (GenBank) Long-chain-fatty-acid--CoA ligase\tK01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]" }, { "name":"SPSPH_010620 adhB_1; (GenBank) Alcohol dehydrogenase 2\tK13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]" }, { "name":"SPSPH_023220 adhB_2; (GenBank) Alcohol dehydrogenase 2\tK13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]" } ] }, { "name":"00073 Cutin, suberine and wax biosynthesis" }, { "name":"00074 Mycolic acid biosynthesis [PATH:ssph00074]", "children":[ { "name":"SPSPH_012010 acpS; (GenBank) Holo-[acyl-carrier-protein] synthase\tK00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]" }, { "name":"SPSPH_016790 acpP_1; (GenBank) Acyl carrier protein\tK02078 acpP; acyl carrier protein" }, { "name":"SPSPH_045720 acpP_2; (GenBank) Acyl carrier protein\tK02078 acpP; acyl carrier protein" }, { "name":"SPSPH_016770 fabD; (GenBank) Malonyl CoA-acyl carrier protein transacylase\tK00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]" } ] }, { "name":"00100 Steroid biosynthesis" }, { "name":"00120 Primary bile acid biosynthesis" }, { "name":"00121 Secondary bile acid biosynthesis" }, { "name":"00140 Steroid hormone biosynthesis" }, { "name":"00561 Glycerolipid metabolism [PATH:ssph00561]", "children":[ { "name":"SPSPH_030960 garK; (GenBank) Glycerate 2-kinase\tK00865 glxK; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"SPSPH_046060 dhaK; (GenBank) PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK\tK05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]" }, { "name":"SPSPH_046050 dhaL; (GenBank) PEP-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL\tK05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]" }, { "name":"SPSPH_046040 dhaM; (GenBank) PEP-dependent dihydroxyacetone kinase, phosphoryl donor subunit DhaM\tK05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]" }, { "name":"SPSPH_041760 dhaD_1; (GenBank) Glycerol dehydrogenase\tK00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]" }, { "name":"SPSPH_030370 glpK; (GenBank) Glycerol kinase\tK00864 glpK; glycerol kinase [EC:2.7.1.30]" }, { "name":"SPSPH_016740 plsX; (GenBank) Phosphate acyltransferase\tK03621 plsX; phosphate acyltransferase [EC:2.3.1.274]" }, { "name":"SPSPH_019010 plsY; (GenBank) Glycerol-3-phosphate acyltransferase\tK08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]" }, { "name":"SPSPH_018900 plsC; (GenBank) 1-acyl-sn-glycerol-3-phosphate acyltransferase\tK00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]" }, { "name":"SPSPH_019500 dgkA; (GenBank) Undecaprenol kinase\tK00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]" }, { "name":"SPSPH_003580 ugtP_1; (GenBank) Processive diacylglycerol beta-glucosyltransferase\tK03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]" }, { "name":"SPSPH_017100 ugtP_2; (GenBank) Processive diacylglycerol beta-glucosyltransferase\tK03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]" }, { "name":"SPSPH_010720 pduE; (GenBank) Propanediol dehydratase small subunit\tK06122 dhbE; glycerol dehydratase small subunit [EC:4.2.1.30]" } ] }, { "name":"00564 Glycerophospholipid metabolism [PATH:ssph00564]", "children":[ { "name":"SPSPH_019020 gpsA; (GenBank) Glycerol-3-phosphate dehydrogenase [NAD(P)+]\tK00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]" }, { "name":"SPSPH_030360 glpA; (GenBank) Anaerobic glycerol-3-phosphate dehydrogenase subunit A\tK00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]" }, { "name":"SPSPH_039330 lhgD; (GenBank) L-2-hydroxyglutarate dehydrogenase\tK00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]" }, { "name":"SPSPH_030350 glpB; (GenBank) Anaerobic glycerol-3-phosphate dehydrogenase subunit B\tK00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]" }, { "name":"SPSPH_030340 glpC; (GenBank) Anaerobic glycerol-3-phosphate dehydrogenase subunit C\tK00113 glpC; glycerol-3-phosphate dehydrogenase subunit C" }, { "name":"SPSPH_019010 plsY; (GenBank) Glycerol-3-phosphate acyltransferase\tK08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]" }, { "name":"SPSPH_018900 plsC; (GenBank) 1-acyl-sn-glycerol-3-phosphate acyltransferase\tK00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]" }, { "name":"SPSPH_019500 dgkA; (GenBank) Undecaprenol kinase\tK00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]" }, { "name":"SPSPH_003570 hypothetical protein\tK01114 plc; phospholipase C [EC:3.1.4.3]" }, { "name":"SPSPH_038770 glpQ; (GenBank) Glycerophosphodiester phosphodiesterase\tK01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]" }, { "name":"SPSPH_017640 cdsA; (GenBank) Phosphatidate cytidylyltransferase\tK00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]" }, { "name":"SPSPH_021360 hypothetical protein\tK17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]" }, { "name":"SPSPH_021370 psd; (GenBank) Phosphatidylserine decarboxylase proenzyme\tK01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]" }, { "name":"SPSPH_015680 hypothetical protein\tK01094 GEP4; phosphatidylglycerophosphatase [EC:3.1.3.27]" } ] }, { "name":"00565 Ether lipid metabolism", "children":[ { "name":"SPSPH_003570 hypothetical protein\tK01114 plc; phospholipase C [EC:3.1.4.3]" } ] }, { "name":"00600 Sphingolipid metabolism" }, { "name":"00590 Arachidonic acid metabolism" }, { "name":"00591 Linoleic acid metabolism" }, { "name":"00592 alpha-Linolenic acid metabolism" }, { "name":"01040 Biosynthesis of unsaturated fatty acids" } ] }, { "name":"09104 Nucleotide metabolism", "children":[ { "name":"00230 Purine metabolism [PATH:ssph00230]", "children":[ { "name":"SPSPH_018270 nudF; (GenBank) ADP-ribose pyrophosphatase\tK01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]" }, { "name":"SPSPH_018570 deoB; (GenBank) Phosphopentomutase\tK01839 deoB; phosphopentomutase [EC:5.4.2.7]" }, { "name":"SPSPH_040790 algC_2; (GenBank) Phosphomannomutase\/phosphoglucomutase\tK15778 pmm-pgm; phosphomannomutase \/ phosphoglucomutase [EC:5.4.2.8 5.4.2.2]" }, { "name":"SPSPH_001990 prs; (GenBank) Ribose-phosphate pyrophosphokinase\tK00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]" }, { "name":"SPSPH_012900 purF; (GenBank) Amidophosphoribosyltransferase\tK00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]" }, { "name":"SPSPH_027570 purD; (GenBank) Phosphoribosylamine--glycine ligase\tK01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]" }, { "name":"SPSPH_012920 purN; (GenBank) Phosphoribosylglycinamide formyltransferase\tK11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]" }, { "name":"SPSPH_002470 purL; (GenBank) Phosphoribosylformylglycinamidine synthase\tK01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]" }, { "name":"SPSPH_012910 purM; (GenBank) Phosphoribosylformylglycinamidine cyclo-ligase\tK01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]" }, { "name":"SPSPH_012880 purE; (GenBank) N5-carboxyaminoimidazole ribonucleotide mutase\tK01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]" }, { "name":"SPSPH_012890 purC_1; (GenBank) Phosphoribosylaminoimidazole-succinocarboxamide synthase\tK01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]" }, { "name":"SPSPH_024950 purC_2; (GenBank) Phosphoribosylaminoimidazole-succinocarboxamide synthase\tK01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]" }, { "name":"SPSPH_046010 purB; (GenBank) Adenylosuccinate lyase\tK01756 purB; adenylosuccinate lyase [EC:4.3.2.2]" }, { "name":"SPSPH_012930 purH; (GenBank) Bifunctional purine biosynthesis protein PurH\tK00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase \/ IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]" }, { "name":"SPSPH_020400 apt_1; (GenBank) Adenine phosphoribosyltransferase\tK00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]" }, { "name":"SPSPH_043850 apt_2; (GenBank) Adenine phosphoribosyltransferase\tK00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]" }, { "name":"SPSPH_023430 hypothetical protein\tK01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]" }, { "name":"SPSPH_021320 surE; (GenBank) 5'-nucleotidase SurE\tK03787 surE; 5'\/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]" }, { "name":"SPSPH_042620 ppnP; (GenBank) Pyrimidine\/purine nucleoside phosphorylase\tK09913 ppnP; purine\/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]" }, { "name":"SPSPH_001290 Polyphenol oxidase\tK05810 LACC1; purine-nucleoside\/S-methyl-5'-thioadenosine phosphorylase \/ adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]" }, { "name":"SPSPH_022070 Polyphenol oxidase\tK05810 LACC1; purine-nucleoside\/S-methyl-5'-thioadenosine phosphorylase \/ adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]" }, { "name":"SPSPH_003790 hpt; (GenBank) Hypoxanthine-guanine phosphoribosyltransferase\tK00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]" }, { "name":"SPSPH_021410 guaB; (GenBank) Inosine-5'-monophosphate dehydrogenase\tK00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]" }, { "name":"SPSPH_022100 ndk; (GenBank) Nucleoside diphosphate kinase\tK00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]" }, { "name":"SPSPH_031790 rdgB; (GenBank) dITP\/XTP pyrophosphatase\tK01519 rdgB; XTP\/dITP diphosphohydrolase [EC:3.6.1.66]" }, { "name":"SPSPH_038640 xpt; (GenBank) Xanthine phosphoribosyltransferase\tK03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]" }, { "name":"SPSPH_012200 guaA; (GenBank) GMP synthase [glutamine-hydrolyzing]\tK01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]" }, { "name":"SPSPH_035250 guaD; (GenBank) Guanine deaminase\tK01487 guaD; guanine deaminase [EC:3.5.4.3]" }, { "name":"SPSPH_021770 gmk_1; (GenBank) Guanylate kinase\tK00942 gmk; guanylate kinase [EC:2.7.4.8]" }, { "name":"SPSPH_041520 gmk_2; (GenBank) Guanylate kinase\tK00942 gmk; guanylate kinase [EC:2.7.4.8]" }, { "name":"SPSPH_023030 nrdZ; (GenBank) Vitamin B12-dependent ribonucleoside-diphosphate reductase\tK00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]" }, { "name":"SPSPH_016580 nrdD; (GenBank) Anaerobic ribonucleoside-triphosphate reductase\tK21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]" }, { "name":"SPSPH_011920 Deoxyguanosinetriphosphate triphosphohydrolase-like protein\tK01129 dgt; dGTPase [EC:3.1.5.1]" }, { "name":"SPSPH_019620 Deoxyguanosinetriphosphate triphosphohydrolase-like protein\tK01129 dgt; dGTPase [EC:3.1.5.1]" }, { "name":"SPSPH_039620 Deoxyguanosinetriphosphate triphosphohydrolase-like protein\tK01129 dgt; dGTPase [EC:3.1.5.1]" }, { "name":"SPSPH_020410 relA; (GenBank) GTP pyrophosphokinase\tK01139 spoT; GTP diphosphokinase \/ guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]" }, { "name":"SPSPH_043660 ppx; (GenBank) Exopolyphosphatase\tK01524 ppx-gppA; exopolyphosphatase \/ guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]" }, { "name":"SPSPH_043710 gppA; (GenBank) Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase\tK01524 ppx-gppA; exopolyphosphatase \/ guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]" }, { "name":"SPSPH_046000 purA; (GenBank) Adenylosuccinate synthetase\tK01939 purA; adenylosuccinate synthase [EC:6.3.4.4]" }, { "name":"SPSPH_035880 ade; (GenBank) Adenine deaminase\tK01486 ade; adenine deaminase [EC:3.5.4.2]" }, { "name":"SPSPH_004860 adk; (GenBank) Adenylate kinase\tK00939 adk; adenylate kinase [EC:2.7.4.3]" }, { "name":"SPSPH_015000 hypothetical protein\tK28933 yqeK; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]" }, { "name":"SPSPH_008470 cysN; (GenBank) Sulfate adenylyltransferase subunit 1\tK00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]" }, { "name":"SPSPH_008460 cysD; (GenBank) Sulfate adenylyltransferase subunit 2\tK00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]" }, { "name":"SPSPH_035590 allB_1; (GenBank) Allantoinase\tK01466 allB; allantoinase [EC:3.5.2.5]" }, { "name":"SPSPH_035600 allB_2; (GenBank) Allantoinase\tK01466 allB; allantoinase [EC:3.5.2.5]" }, { "name":"SPSPH_035610 allC; (GenBank) Allantoate amidohydrolase\tK02083 allC; allantoate deiminase [EC:3.5.3.9]" }, { "name":"SPSPH_034570 pucG; (GenBank) (S)-ureidoglycine--glyoxylate transaminase\tK00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]" }, { "name":"SPSPH_035640 allE; (GenBank) (S)-ureidoglycine aminohydrolase\tK14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]" }, { "name":"SPSPH_035700 allD; (GenBank) Ureidoglycolate dehydrogenase (NAD(+))\tK00073 allD; ureidoglycolate dehydrogenase (NAD+) [EC:1.1.1.350]" }, { "name":"SPSPH_035630 arcC1; (GenBank) Carbamate kinase 1\tK00926 arcC; carbamate kinase [EC:2.7.2.2]" } ] }, { "name":"00240 Pyrimidine metabolism [PATH:ssph00240]", "children":[ { "name":"SPSPH_022400 carB; (GenBank) Carbamoyl-phosphate synthase large chain\tK01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]" }, { "name":"SPSPH_022410 carA_2; (GenBank) Carbamoyl-phosphate synthase small chain\tK01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]" }, { "name":"SPSPH_022430 pyrB; (GenBank) Aspartate carbamoyltransferase\tK00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]" }, { "name":"SPSPH_022420 pyrC; (GenBank) Dihydroorotase\tK01465 URA4; dihydroorotase [EC:3.5.2.3]" }, { "name":"SPSPH_022380 pyrD; (GenBank) Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit\tK17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]" }, { "name":"SPSPH_022390 pyrK_2; (GenBank) Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit\tK02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit" }, { "name":"SPSPH_022360 pyrE; (GenBank) Orotate phosphoribosyltransferase\tK00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]" }, { "name":"SPSPH_022370 pyrF; (GenBank) Orotidine 5'-phosphate decarboxylase\tK01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]" }, { "name":"SPSPH_017590 pyrH; (GenBank) Uridylate kinase\tK09903 pyrH; uridylate kinase [EC:2.7.4.22]" }, { "name":"SPSPH_022100 ndk; (GenBank) Nucleoside diphosphate kinase\tK00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]" }, { "name":"SPSPH_014720 maf; (GenBank) dTTP\/UTP pyrophosphatase\tK06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]" }, { "name":"SPSPH_002620 pyrG; (GenBank) CTP synthase\tK01937 pyrG; CTP synthase [EC:6.3.4.2]" }, { "name":"SPSPH_018890 cmk; (GenBank) Cytidylate kinase\tK00945 cmk; CMP\/dCMP kinase [EC:2.7.4.25]" }, { "name":"SPSPH_023790 udk; (GenBank) Uridine kinase\tK00876 udk; uridine kinase [EC:2.7.1.48]" }, { "name":"SPSPH_023430 hypothetical protein\tK01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]" }, { "name":"SPSPH_021320 surE; (GenBank) 5'-nucleotidase SurE\tK03787 surE; 5'\/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]" }, { "name":"SPSPH_042620 ppnP; (GenBank) Pyrimidine\/purine nucleoside phosphorylase\tK09913 ppnP; purine\/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]" }, { "name":"SPSPH_033870 upp; (GenBank) Uracil phosphoribosyltransferase\tK00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]" }, { "name":"SPSPH_021840 pyrR; (GenBank) Bifunctional protein PyrR\tK02825 pyrR; pyrimidine operon attenuation protein \/ uracil phosphoribosyltransferase [EC:2.4.2.9]" }, { "name":"SPSPH_018580 pdp; (GenBank) Pyrimidine-nucleoside phosphorylase\tK00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]" }, { "name":"SPSPH_019510 cdd; (GenBank) Cytidine deaminase\tK01489 cdd; cytidine deaminase [EC:3.5.4.5]" }, { "name":"SPSPH_031120 codA; (GenBank) Cytosine deaminase\tK01485 codA; cytosine\/creatinine deaminase [EC:3.5.4.1 3.5.4.21]" }, { "name":"SPSPH_016580 nrdD; (GenBank) Anaerobic ribonucleoside-triphosphate reductase\tK21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]" }, { "name":"SPSPH_023030 nrdZ; (GenBank) Vitamin B12-dependent ribonucleoside-diphosphate reductase\tK00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]" }, { "name":"SPSPH_033860 hypothetical protein\tK01493 comEB; dCMP deaminase [EC:3.5.4.12]" }, { "name":"SPSPH_001660 tmk; (GenBank) Thymidylate kinase\tK00943 tmk; dTMP kinase [EC:2.7.4.9]" }, { "name":"SPSPH_017860 dut; (GenBank) Deoxyuridine 5'-triphosphate nucleotidohydrolase\tK01520 dut; dUTP diphosphatase [EC:3.6.1.23]" }, { "name":"SPSPH_004310 thyX; (GenBank) Flavin-dependent thymidylate synthase\tK03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]" }, { "name":"SPSPH_035310 D-hydantoinase\tK01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]" } ] } ] }, { "name":"09105 Amino acid metabolism", "children":[ { "name":"00250 Alanine, aspartate and glutamate metabolism [PATH:ssph00250]", "children":[ { "name":"SPSPH_002080 Aspartate\/prephenate aminotransferase\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SPSPH_011040 Aspartate racemase\tK01779 racD; aspartate racemase [EC:5.1.1.13]" }, { "name":"SPSPH_038220 ansB; (GenBank) Glutaminase-asparaginase\tK01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]" }, { "name":"SPSPH_007610 asnO; (GenBank) Asparagine synthetase [glutamine-hydrolyzing] 3\tK01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]" }, { "name":"SPSPH_032960 asnB; (GenBank) Putative asparagine synthetase [glutamine-hydrolyzing]\tK01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]" }, { "name":"SPSPH_033990 nit1; (GenBank) Deaminated glutathione amidase\tK13566 NIT2; omega-amidase [EC:3.5.1.3]" }, { "name":"SPSPH_026350 ald; (GenBank) Alanine dehydrogenase\tK00259 ald; alanine dehydrogenase [EC:1.4.1.1]" }, { "name":"SPSPH_046480 aspA; (GenBank) Aspartate ammonia-lyase\tK01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]" }, { "name":"SPSPH_005160 argG; (GenBank) Argininosuccinate synthase\tK01940 argG; argininosuccinate synthase [EC:6.3.4.5]" }, { "name":"SPSPH_005170 argH; (GenBank) Argininosuccinate lyase\tK01755 argH; argininosuccinate lyase [EC:4.3.2.1]" }, { "name":"SPSPH_046000 purA; (GenBank) Adenylosuccinate synthetase\tK01939 purA; adenylosuccinate synthase [EC:6.3.4.4]" }, { "name":"SPSPH_046010 purB; (GenBank) Adenylosuccinate lyase\tK01756 purB; adenylosuccinate lyase [EC:4.3.2.2]" }, { "name":"SPSPH_022430 pyrB; (GenBank) Aspartate carbamoyltransferase\tK00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]" }, { "name":"SPSPH_022970 argD_2; (GenBank) Acetylornithine aminotransferase\tK00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]" }, { "name":"SPSPH_025750 davT; (GenBank) 5-aminovalerate aminotransferase DavT\tK00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]" }, { "name":"SPSPH_046370 hypothetical protein\tK00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]" }, { "name":"SPSPH_002420 gltD; (GenBank) Glutamate synthase [NADPH] small chain\tK00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]" }, { "name":"SPSPH_025420 gdh_1; (GenBank) NAD-specific glutamate dehydrogenase\tK00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]" }, { "name":"SPSPH_038660 gdh_2; (GenBank) NADP-specific glutamate dehydrogenase\tK00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]" }, { "name":"SPSPH_022000 rocA1; (GenBank) 1-pyrroline-5-carboxylate dehydrogenase 1\tK00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]" }, { "name":"SPSPH_042680 putC; (GenBank) 1-pyrroline-5-carboxylate dehydrogenase 2\tK00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]" }, { "name":"SPSPH_019730 hypothetical protein\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"SPSPH_022400 carB; (GenBank) Carbamoyl-phosphate synthase large chain\tK01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]" }, { "name":"SPSPH_022410 carA_2; (GenBank) Carbamoyl-phosphate synthase small chain\tK01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]" }, { "name":"SPSPH_005230 glmS_1; (GenBank) Glutamine--fructose-6-phosphate aminotransferase [isomerizing]\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]" }, { "name":"SPSPH_012900 purF; (GenBank) Amidophosphoribosyltransferase\tK00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]" } ] }, { "name":"00260 Glycine, serine and threonine metabolism [PATH:ssph00260]", "children":[ { "name":"SPSPH_017920 lysC_1; (GenBank) Aspartokinase\tK00928 lysC; aspartate kinase [EC:2.7.2.4]" }, { "name":"SPSPH_024070 lysC_2; (GenBank) Aspartokinase\tK00928 lysC; aspartate kinase [EC:2.7.2.4]" }, { "name":"SPSPH_017910 asd; (GenBank) Aspartate-semialdehyde dehydrogenase\tK00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]" }, { "name":"SPSPH_019050 hom; (GenBank) Homoserine dehydrogenase\tK00003 hom; homoserine dehydrogenase [EC:1.1.1.3]" }, { "name":"SPSPH_019060 thrB; (GenBank) Homoserine kinase\tK00872 thrB; homoserine kinase [EC:2.7.1.39]" }, { "name":"SPSPH_005340 thrC_1; (GenBank) Threonine synthase\tK01733 thrC; threonine synthase [EC:4.2.3.1]" }, { "name":"SPSPH_009690 thrC_2; (GenBank) Threonine synthase\tK01733 thrC; threonine synthase [EC:4.2.3.1]" }, { "name":"SPSPH_024650 thrC_3; (GenBank) Threonine synthase\tK01733 thrC; threonine synthase [EC:4.2.3.1]" }, { "name":"SPSPH_020480 ltaA; (GenBank) L-allo-threonine aldolase\tK01620 ltaE; threonine aldolase [EC:4.1.2.48]" }, { "name":"SPSPH_033880 glyA_1; (GenBank) Serine hydroxymethyltransferase\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" }, { "name":"SPSPH_044630 glyA_2; (GenBank) Serine hydroxymethyltransferase\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" }, { "name":"SPSPH_030960 garK; (GenBank) Glycerate 2-kinase\tK00865 glxK; glycerate 2-kinase [EC:2.7.1.165]" }, { "name":"SPSPH_030270 gpmI_2; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase\tK15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]" }, { "name":"SPSPH_008730 apgM_1; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase\tK15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]" }, { "name":"SPSPH_038920 apgM_2; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase\tK15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]" }, { "name":"SPSPH_002230 serA; (GenBank) D-3-phosphoglycerate dehydrogenase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"SPSPH_042200 serC; (GenBank) Phosphoserine aminotransferase\tK00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]" }, { "name":"SPSPH_016240 pspA_1; (GenBank) Phosphoserine phosphatase 1\tK22305 psp; phosphoserine phosphatase [EC:3.1.3.3]" }, { "name":"SPSPH_042190 pspA_2; (GenBank) Phosphoserine phosphatase 1\tK22305 psp; phosphoserine phosphatase [EC:3.1.3.3]" }, { "name":"SPSPH_013060 bioF; (GenBank) 8-amino-7-oxononanoate synthase\tK00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]" }, { "name":"SPSPH_023930 pdhD; (GenBank) Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SPSPH_028670 gcvH_1; (GenBank) Glycine cleavage system H protein\tK02437 gcvH; glycine cleavage system H protein" }, { "name":"SPSPH_028700 gcvH_2; (GenBank) Glycine cleavage system H protein\tK02437 gcvH; glycine cleavage system H protein" }, { "name":"SPSPH_021360 hypothetical protein\tK17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]" }, { "name":"SPSPH_008900 mtgB_1; (GenBank) Glycine betaine methyltransferase\tK25220 mtgB; glycine betaine---corrinoid protein Co-methyltransferase [EC:2.1.1.376]" }, { "name":"SPSPH_008990 trimethylamine methyltransferase family protein\tK25220 mtgB; glycine betaine---corrinoid protein Co-methyltransferase [EC:2.1.1.376]" }, { "name":"SPSPH_009000 trimethylamine methyltransferase family protein\tK25220 mtgB; glycine betaine---corrinoid protein Co-methyltransferase [EC:2.1.1.376]" }, { "name":"SPSPH_030030 trimethylamine methyltransferase family protein\tK25220 mtgB; glycine betaine---corrinoid protein Co-methyltransferase [EC:2.1.1.376]" }, { "name":"SPSPH_031240 mtgB_6; (GenBank) Glycine betaine methyltransferase\tK25220 mtgB; glycine betaine---corrinoid protein Co-methyltransferase [EC:2.1.1.376]" }, { "name":"SPSPH_031270 mtgB_7; (GenBank) Glycine betaine methyltransferase\tK25220 mtgB; glycine betaine---corrinoid protein Co-methyltransferase [EC:2.1.1.376]" }, { "name":"SPSPH_037480 mtgB_8; (GenBank) Glycine betaine methyltransferase\tK25220 mtgB; glycine betaine---corrinoid protein Co-methyltransferase [EC:2.1.1.376]" }, { "name":"SPSPH_038090 mtgB_10; (GenBank) Glycine betaine methyltransferase\tK25220 mtgB; glycine betaine---corrinoid protein Co-methyltransferase [EC:2.1.1.376]" }, { "name":"SPSPH_015240 sdhB_1; (GenBank) L-serine dehydratase, beta chain\tK01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]" }, { "name":"SPSPH_015250 sdhA_1; (GenBank) L-serine dehydratase, alpha chain\tK01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]" }, { "name":"SPSPH_001970 tdcB_1; (GenBank) L-threonine ammonia-lyase\tK01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]" }, { "name":"SPSPH_024920 tdcB_2; (GenBank) L-threonine dehydratase catabolic TdcB\tK01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]" }, { "name":"SPSPH_037330 tdcB_3; (GenBank) L-threonine dehydratase catabolic TdcB\tK01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]" }, { "name":"SPSPH_022840 trpA; (GenBank) Tryptophan synthase alpha chain\tK01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]" }, { "name":"SPSPH_022850 trpB; (GenBank) Tryptophan synthase beta chain\tK01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]" }, { "name":"SPSPH_003040 doeB_1; (GenBank) N-alpha-acetyl-L-2,4-diaminobutyric acid deacetylase\tK15784 doeB; N2-acetyl-L-2,4-diaminobutanoate deacetylase [EC:3.5.1.125]" }, { "name":"SPSPH_006320 doeB_2; (GenBank) N-alpha-acetyl-L-2,4-diaminobutyric acid deacetylase\tK15784 doeB; N2-acetyl-L-2,4-diaminobutanoate deacetylase [EC:3.5.1.125]" } ] }, { "name":"00270 Cysteine and methionine metabolism [PATH:ssph00270]", "children":[ { "name":"SPSPH_004280 cysE; (GenBank) Serine acetyltransferase\tK00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]" }, { "name":"SPSPH_010100 cysK1_1; (GenBank) O-acetylserine sulfhydrylase\tK01738 cysK; cysteine synthase [EC:2.5.1.47]" }, { "name":"SPSPH_010180 cysK1_2; (GenBank) O-acetylserine sulfhydrylase\tK01738 cysK; cysteine synthase [EC:2.5.1.47]" }, { "name":"SPSPH_008720 patB_1; (GenBank) Cystathionine beta-lyase PatB\tK14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]" }, { "name":"SPSPH_010070 patB_2; (GenBank) Cystathionine beta-lyase PatB\tK14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]" }, { "name":"SPSPH_029260 patB_3; (GenBank) Cystathionine beta-lyase PatB\tK14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]" }, { "name":"SPSPH_006220 acsE_2; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_008920 acsE_3; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_027010 glmS_4; (GenBank) Glutamate mutase sigma subunit\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_027020 acsE_5; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_029030 acsE_6; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_029800 acsE_7; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_029920 methyltetrahydrofolate cobalamin methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_031020 acsE_9; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_031250 acsE_10; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_036220 metH_13; (GenBank) Methionine synthase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_037550 acsE_12; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_038100 acsE_13; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_046520 metH_18; (GenBank) Methionine synthase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_021740 metK; (GenBank) S-adenosylmethionine synthase\tK00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]" }, { "name":"SPSPH_002530 speD; (GenBank) S-adenosylmethionine decarboxylase proenzyme\tK01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]" }, { "name":"SPSPH_004030 speH; (GenBank) S-adenosylmethionine decarboxylase proenzyme\tK01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]" }, { "name":"SPSPH_032260 speE; (GenBank) Polyamine aminopropyltransferase\tK00797 speE; spermidine synthase [EC:2.5.1.16]" }, { "name":"SPSPH_001300 mtnN; (GenBank) 5'-methylthioadenosine\/S-adenosylhomocysteine nucleosidase\tK01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]" }, { "name":"SPSPH_001290 Polyphenol oxidase\tK05810 LACC1; purine-nucleoside\/S-methyl-5'-thioadenosine phosphorylase \/ adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]" }, { "name":"SPSPH_022070 Polyphenol oxidase\tK05810 LACC1; purine-nucleoside\/S-methyl-5'-thioadenosine phosphorylase \/ adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]" }, { "name":"SPSPH_021260 mtaD; (GenBank) 5-methylthioadenosine\/S-adenosylhomocysteine deaminase\tK12960 mtaD; 5-methylthioadenosine\/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]" }, { "name":"SPSPH_021290 S-methyl-5'-thioinosine phosphorylase\tK19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]" }, { "name":"SPSPH_021280 mtnA; (GenBank) Methylthioribose-1-phosphate isomerase\tK08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]" }, { "name":"SPSPH_045610 hypothetical protein\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]" }, { "name":"SPSPH_021270 ahcY; (GenBank) Adenosylhomocysteinase\tK01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]" }, { "name":"SPSPH_017920 lysC_1; (GenBank) Aspartokinase\tK00928 lysC; aspartate kinase [EC:2.7.2.4]" }, { "name":"SPSPH_024070 lysC_2; (GenBank) Aspartokinase\tK00928 lysC; aspartate kinase [EC:2.7.2.4]" }, { "name":"SPSPH_017910 asd; (GenBank) Aspartate-semialdehyde dehydrogenase\tK00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]" }, { "name":"SPSPH_019050 hom; (GenBank) Homoserine dehydrogenase\tK00003 hom; homoserine dehydrogenase [EC:1.1.1.3]" }, { "name":"SPSPH_019060 thrB; (GenBank) Homoserine kinase\tK00872 thrB; homoserine kinase [EC:2.7.1.39]" }, { "name":"SPSPH_012820 metAA; (GenBank) Homoserine O-acetyltransferase\tK00651 metA; homoserine O-succinyltransferase\/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]" }, { "name":"SPSPH_010460 metXA; (GenBank) Homoserine O-acetyltransferase\tK00641 metX; homoserine O-acetyltransferase\/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]" }, { "name":"SPSPH_010140 mccB; (GenBank) Cystathionine gamma-lyase\tK01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]" }, { "name":"SPSPH_007990 O-acetyl-L-homoserine sulfhydrylase\tK01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]" }, { "name":"SPSPH_010470 O-acetyl-L-homoserine sulfhydrylase\tK01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]" }, { "name":"SPSPH_029470 O-acetyl-L-homoserine sulfhydrylase\tK01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]" }, { "name":"SPSPH_005180 ilvK; (GenBank) Branched-chain-amino-acid aminotransferase 2\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"SPSPH_014050 ilvE; (GenBank) Branched-chain-amino-acid aminotransferase\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"SPSPH_002080 Aspartate\/prephenate aminotransferase\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SPSPH_011130 ldh; (GenBank) L-lactate dehydrogenase\tK00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]" }, { "name":"SPSPH_015240 sdhB_1; (GenBank) L-serine dehydratase, beta chain\tK01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]" }, { "name":"SPSPH_015250 sdhA_1; (GenBank) L-serine dehydratase, alpha chain\tK01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]" }, { "name":"SPSPH_002230 serA; (GenBank) D-3-phosphoglycerate dehydrogenase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"SPSPH_042200 serC; (GenBank) Phosphoserine aminotransferase\tK00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]" } ] }, { "name":"00280 Valine, leucine and isoleucine degradation [PATH:ssph00280]", "children":[ { "name":"SPSPH_005180 ilvK; (GenBank) Branched-chain-amino-acid aminotransferase 2\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"SPSPH_014050 ilvE; (GenBank) Branched-chain-amino-acid aminotransferase\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"SPSPH_023930 pdhD; (GenBank) Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SPSPH_001540 bcd; (GenBank) Acyl-CoA dehydrogenase, short-chain specific\tK00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]" }, { "name":"SPSPH_007530 Acyl-CoA dehydrogenase, short-chain specific\tK00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]" }, { "name":"SPSPH_041870 Acyl-CoA dehydrogenase, short-chain specific\tK00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]" }, { "name":"SPSPH_014530 epi; (GenBank) Ethylmalonyl-CoA\/methylmalonyl-CoA epimerase\tK05606 MCEE; methylmalonyl-CoA\/ethylmalonyl-CoA epimerase [EC:5.1.99.1]" }, { "name":"SPSPH_014510 mcm; (GenBank) Methylmalonyl-CoA mutase\tK01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]" }, { "name":"SPSPH_014500 bhbA; (GenBank) Methylmalonyl-CoA mutase\tK01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]" }, { "name":"SPSPH_032150 yngG; (GenBank) Hydroxymethylglutaryl-CoA lyase YngG\tK01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]" }, { "name":"SPSPH_001550 thlA_1; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_007500 thlA_2; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_041940 thlA_3; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" } ] }, { "name":"00290 Valine, leucine and isoleucine biosynthesis [PATH:ssph00290]", "children":[ { "name":"SPSPH_001970 tdcB_1; (GenBank) L-threonine ammonia-lyase\tK01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]" }, { "name":"SPSPH_024920 tdcB_2; (GenBank) L-threonine dehydratase catabolic TdcB\tK01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]" }, { "name":"SPSPH_037330 tdcB_3; (GenBank) L-threonine dehydratase catabolic TdcB\tK01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]" }, { "name":"SPSPH_035200 leuC_1; (GenBank) 3-isopropylmalate dehydratase large subunit\tK01703 leuC; 3-isopropylmalate\/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]" }, { "name":"SPSPH_042530 dmdA; (GenBank) 2,3-dimethylmalate dehydratase large subunit\tK01703 leuC; 3-isopropylmalate\/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]" }, { "name":"SPSPH_035190 dmdB_1; (GenBank) 2,3-dimethylmalate dehydratase small subunit\tK01704 leuD; 3-isopropylmalate\/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]" }, { "name":"SPSPH_042520 dmdB_2; (GenBank) 2,3-dimethylmalate dehydratase small subunit\tK01704 leuD; 3-isopropylmalate\/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]" }, { "name":"SPSPH_042510 leuB; (GenBank) 3-isopropylmalate dehydrogenase\tK00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]" }, { "name":"SPSPH_023360 ilvB_1; (GenBank) Acetolactate synthase isozyme 1 large subunit\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SPSPH_037740 ilvB_2; (GenBank) Acetolactate synthase large subunit\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SPSPH_042500 ilvB_3; (GenBank) Acetolactate synthase large subunit\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SPSPH_037730 ilvH_1; (GenBank) Putative acetolactate synthase small subunit\tK01653 E2.2.1.6S; acetolactate synthase I\/III small subunit [EC:2.2.1.6]" }, { "name":"SPSPH_042560 ilvH_2; (GenBank) Putative acetolactate synthase small subunit\tK01653 E2.2.1.6S; acetolactate synthase I\/III small subunit [EC:2.2.1.6]" }, { "name":"SPSPH_042550 ilvC; (GenBank) Ketol-acid reductoisomerase (NAD(+))\tK00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]" }, { "name":"SPSPH_000260 ilvD_1; (GenBank) Dihydroxy-acid dehydratase\tK01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]" }, { "name":"SPSPH_005510 ilvD_2; (GenBank) Dihydroxy-acid dehydratase\tK01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]" }, { "name":"SPSPH_005580 ilvD_3; (GenBank) Dihydroxy-acid dehydratase\tK01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]" }, { "name":"SPSPH_005610 ilvD_4; (GenBank) Dihydroxy-acid dehydratase\tK01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]" }, { "name":"SPSPH_031950 ilvD_5; (GenBank) Dihydroxy-acid dehydratase\tK01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]" }, { "name":"SPSPH_005180 ilvK; (GenBank) Branched-chain-amino-acid aminotransferase 2\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"SPSPH_014050 ilvE; (GenBank) Branched-chain-amino-acid aminotransferase\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"SPSPH_038230 leuA_1; (GenBank) 2-isopropylmalate synthase\tK01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]" }, { "name":"SPSPH_042540 leuA_3; (GenBank) 2-isopropylmalate synthase\tK01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]" } ] }, { "name":"00300 Lysine biosynthesis [PATH:ssph00300]", "children":[ { "name":"SPSPH_019050 hom; (GenBank) Homoserine dehydrogenase\tK00003 hom; homoserine dehydrogenase [EC:1.1.1.3]" }, { "name":"SPSPH_017920 lysC_1; (GenBank) Aspartokinase\tK00928 lysC; aspartate kinase [EC:2.7.2.4]" }, { "name":"SPSPH_024070 lysC_2; (GenBank) Aspartokinase\tK00928 lysC; aspartate kinase [EC:2.7.2.4]" }, { "name":"SPSPH_017910 asd; (GenBank) Aspartate-semialdehyde dehydrogenase\tK00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]" }, { "name":"SPSPH_017930 dapA_1; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"SPSPH_031010 dapA_2; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"SPSPH_039260 dapA_3; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"SPSPH_017900 dapB_1; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase\tK00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]" }, { "name":"SPSPH_028920 dapB_2; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase\tK00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]" }, { "name":"SPSPH_005140 argD_1; (GenBank) Acetylornithine aminotransferase\tK00821 argD; acetylornithine\/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]" }, { "name":"SPSPH_021810 dapF; (GenBank) Diaminopimelate epimerase\tK01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]" }, { "name":"SPSPH_000630 dapL_1; (GenBank) LL-diaminopimelate aminotransferase\tK10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]" }, { "name":"SPSPH_021250 dapL_2; (GenBank) LL-diaminopimelate aminotransferase\tK10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]" }, { "name":"SPSPH_028290 lysA; (GenBank) Diaminopimelate decarboxylase\tK01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]" }, { "name":"SPSPH_038940 ddh; (GenBank) Meso-diaminopimelate D-dehydrogenase\tK03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16]" }, { "name":"SPSPH_002550 murE_1; (GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase\tK01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]" }, { "name":"SPSPH_016380 murE_2; (GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase\tK01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]" }, { "name":"SPSPH_016390 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase\tK01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]" }, { "name":"SPSPH_029840 pylB; (GenBank) methylornithine synthase PylB\tK16180 pylB; methylornithine synthase [EC:5.4.99.58]" }, { "name":"SPSPH_029990 pylB; (GenBank) methylornithine synthase PylB\tK16180 pylB; methylornithine synthase [EC:5.4.99.58]" }, { "name":"SPSPH_029830 pylC; (GenBank) 3-methylornithine--L-lysine ligase PylC\tK16181 pylC; 3-methylornithine--L-lysine ligase [EC:6.3.2.59]" }, { "name":"SPSPH_029980 pylC; (GenBank) 3-methylornithine--L-lysine ligase PylC\tK16181 pylC; 3-methylornithine--L-lysine ligase [EC:6.3.2.59]" }, { "name":"SPSPH_029820 pylD; (GenBank) 3-methylornithyl-N6-L-lysine dehydrogenase PylD\tK16182 pylD; 3-methylornithyl-N6-L-lysine dehydrogenase [EC:1.4.1.-]" }, { "name":"SPSPH_029970 pylD; (GenBank) 3-methylornithyl-N6-L-lysine dehydrogenase PylD\tK16182 pylD; 3-methylornithyl-N6-L-lysine dehydrogenase [EC:1.4.1.-]" } ] }, { "name":"00310 Lysine degradation [PATH:ssph00310]", "children":[ { "name":"SPSPH_023930 pdhD; (GenBank) Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SPSPH_001550 thlA_1; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_007500 thlA_2; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_041940 thlA_3; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_022150 patA; (GenBank) Putrescine aminotransferase\tK09251 patA; putrescine aminotransferase [EC:2.6.1.82]" }, { "name":"SPSPH_026920 kce_1; (GenBank) 3-keto-5-aminohexanoate cleavage enzyme\tK18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]" }, { "name":"SPSPH_040120 kce_2; (GenBank) 3-keto-5-aminohexanoate cleavage enzyme\tK18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]" }, { "name":"SPSPH_041800 kce_3; (GenBank) 3-keto-5-aminohexanoate cleavage enzyme\tK18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]" } ] }, { "name":"00220 Arginine biosynthesis [PATH:ssph00220]", "children":[ { "name":"SPSPH_005150 argF; (GenBank) Ornithine carbamoyltransferase\tK00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]" }, { "name":"SPSPH_005160 argG; (GenBank) Argininosuccinate synthase\tK01940 argG; argininosuccinate synthase [EC:6.3.4.5]" }, { "name":"SPSPH_005170 argH; (GenBank) Argininosuccinate lyase\tK01755 argH; argininosuccinate lyase [EC:4.3.2.1]" }, { "name":"SPSPH_023410 rocF; (GenBank) Arginase\tK01476 rocF; arginase [EC:3.5.3.1]" }, { "name":"SPSPH_019730 hypothetical protein\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"SPSPH_022400 carB; (GenBank) Carbamoyl-phosphate synthase large chain\tK01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]" }, { "name":"SPSPH_022410 carA_2; (GenBank) Carbamoyl-phosphate synthase small chain\tK01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]" }, { "name":"SPSPH_035630 arcC1; (GenBank) Carbamate kinase 1\tK00926 arcC; carbamate kinase [EC:2.7.2.2]" }, { "name":"SPSPH_025420 gdh_1; (GenBank) NAD-specific glutamate dehydrogenase\tK00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]" }, { "name":"SPSPH_038660 gdh_2; (GenBank) NADP-specific glutamate dehydrogenase\tK00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]" }, { "name":"SPSPH_002080 Aspartate\/prephenate aminotransferase\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SPSPH_023270 argA; (GenBank) Amino-acid acetyltransferase\tK00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]" }, { "name":"SPSPH_005120 argJ; (GenBank) Arginine biosynthesis bifunctional protein ArgJ\tK00620 argJ; glutamate N-acetyltransferase \/ amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]" }, { "name":"SPSPH_005130 argB; (GenBank) Acetylglutamate kinase\tK00930 argB; acetylglutamate kinase [EC:2.7.2.8]" }, { "name":"SPSPH_005110 argC; (GenBank) N-acetyl-gamma-glutamyl-phosphate reductase\tK00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]" }, { "name":"SPSPH_005140 argD_1; (GenBank) Acetylornithine aminotransferase\tK00821 argD; acetylornithine\/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]" } ] }, { "name":"00330 Arginine and proline metabolism [PATH:ssph00330]", "children":[ { "name":"SPSPH_031120 codA; (GenBank) Cytosine deaminase\tK01485 codA; cytosine\/creatinine deaminase [EC:3.5.4.1 3.5.4.21]" }, { "name":"SPSPH_001650 speA; (GenBank) Arginine decarboxylase\tK01585 speA; arginine decarboxylase [EC:4.1.1.19]" }, { "name":"SPSPH_001490 ldc; (GenBank) Lysine\/ornithine decarboxylase\tK01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]" }, { "name":"SPSPH_032260 speE; (GenBank) Polyamine aminopropyltransferase\tK00797 speE; spermidine synthase [EC:2.5.1.16]" }, { "name":"SPSPH_002530 speD; (GenBank) S-adenosylmethionine decarboxylase proenzyme\tK01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]" }, { "name":"SPSPH_004030 speH; (GenBank) S-adenosylmethionine decarboxylase proenzyme\tK01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]" }, { "name":"SPSPH_028980 nspC; (GenBank) Carboxynorspermidine\/carboxyspermidine decarboxylase\tK13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]" }, { "name":"SPSPH_022150 patA; (GenBank) Putrescine aminotransferase\tK09251 patA; putrescine aminotransferase [EC:2.6.1.82]" }, { "name":"SPSPH_023410 rocF; (GenBank) Arginase\tK01476 rocF; arginase [EC:3.5.3.1]" }, { "name":"SPSPH_021960 proC_1; (GenBank) Pyrroline-5-carboxylate reductase\tK00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]" }, { "name":"SPSPH_022000 rocA1; (GenBank) 1-pyrroline-5-carboxylate dehydrogenase 1\tK00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]" }, { "name":"SPSPH_042680 putC; (GenBank) 1-pyrroline-5-carboxylate dehydrogenase 2\tK00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]" }, { "name":"SPSPH_014940 proB_1; (GenBank) Glutamate 5-kinase\tK00931 proB; glutamate 5-kinase [EC:2.7.2.11]" }, { "name":"SPSPH_034640 proB_2; (GenBank) Glutamate 5-kinase 1\tK00931 proB; glutamate 5-kinase [EC:2.7.2.11]" }, { "name":"SPSPH_014960 proA; (GenBank) Gamma-glutamyl phosphate reductase\tK00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]" }, { "name":"SPSPH_042650 pflD_2; (GenBank) Trans-4-hydroxy-L-proline dehydratase\tK23121 pflD; trans-4-hydroxy-L-proline dehydratase [EC:4.2.1.172]" }, { "name":"SPSPH_002080 Aspartate\/prephenate aminotransferase\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SPSPH_038020 4-hydroxyproline 2-epimerase 1\tK01777 prdF; proline racemase [EC:5.1.1.4]" }, { "name":"SPSPH_038030 hypothetical protein\tK01777 prdF; proline racemase [EC:5.1.1.4]" }, { "name":"SPSPH_038070 putative trans-3-hydroxy-L-proline dehydratase\tK01777 prdF; proline racemase [EC:5.1.1.4]" } ] }, { "name":"00340 Histidine metabolism [PATH:ssph00340]", "children":[ { "name":"SPSPH_027490 hisG; (GenBank) ATP phosphoribosyltransferase\tK00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]" }, { "name":"SPSPH_027520 hisZ; (GenBank) ATP phosphoribosyltransferase regulatory subunit\tK02502 hisZ; ATP phosphoribosyltransferase regulatory subunit" }, { "name":"SPSPH_027420 hisI; (GenBank) Histidine biosynthesis bifunctional protein HisIE\tK11755 hisIE; phosphoribosyl-AMP cyclohydrolase \/ phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]" }, { "name":"SPSPH_027440 hisA; (GenBank) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase\tK01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]" }, { "name":"SPSPH_027450 hisH; (GenBank) Imidazole glycerol phosphate synthase subunit HisH\tK02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]" }, { "name":"SPSPH_027430 hisF; (GenBank) Imidazole glycerol phosphate synthase subunit HisF\tK02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]" }, { "name":"SPSPH_027460 hisB; (GenBank) Imidazoleglycerol-phosphate dehydratase\tK01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]" }, { "name":"SPSPH_027470 hisC_2; (GenBank) Histidinol-phosphate aminotransferase\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"SPSPH_042640 hisN; (GenBank) Histidinol-phosphatase\tK05602 hisN; histidinol-phosphatase [EC:3.1.3.15]" }, { "name":"SPSPH_034080 hisK; (GenBank) Histidinol-phosphatase\tK04486 hisK; histidinol-phosphatase (PHP family) [EC:3.1.3.15]" }, { "name":"SPSPH_027480 hisD; (GenBank) Histidinol dehydrogenase\tK00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]" }, { "name":"SPSPH_003150 hutH_1; (GenBank) Histidine ammonia-lyase\tK01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]" }, { "name":"SPSPH_010400 hutH_2; (GenBank) Histidine ammonia-lyase\tK01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]" }, { "name":"SPSPH_010410 hutH_3; (GenBank) Histidine ammonia-lyase\tK01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]" }, { "name":"SPSPH_037900 hutH_4; (GenBank) Histidine ammonia-lyase\tK01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]" }, { "name":"SPSPH_003160 hutU; (GenBank) Urocanate hydratase\tK01712 hutU; urocanate hydratase [EC:4.2.1.49]" }, { "name":"SPSPH_003170 hutI_1; (GenBank) Imidazolonepropionase\tK01468 hutI; imidazolonepropionase [EC:3.5.2.7]" }, { "name":"SPSPH_003220 hutG; (GenBank) Formimidoylglutamase\tK01479 hutG; formiminoglutamase [EC:3.5.3.8]" }, { "name":"SPSPH_003210 Glutamate formimidoyltransferase\tK00603 fctD; glutamate formiminotransferase \/ 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]" }, { "name":"SPSPH_013210 Glutamate formimidoyltransferase\tK00603 fctD; glutamate formiminotransferase \/ 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]" } ] }, { "name":"00350 Tyrosine metabolism [PATH:ssph00350]", "children":[ { "name":"SPSPH_002080 Aspartate\/prephenate aminotransferase\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SPSPH_027470 hisC_2; (GenBank) Histidinol-phosphate aminotransferase\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"SPSPH_010620 adhB_1; (GenBank) Alcohol dehydrogenase 2\tK13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]" }, { "name":"SPSPH_023220 adhB_2; (GenBank) Alcohol dehydrogenase 2\tK13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]" }, { "name":"SPSPH_037850 tpl; (GenBank) Tyrosine phenol-lyase\tK01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2]" } ] }, { "name":"00360 Phenylalanine metabolism [PATH:ssph00360]", "children":[ { "name":"SPSPH_000710 Phenylacetate-coenzyme A ligase\tK01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]" }, { "name":"SPSPH_028570 Phenylacetate-coenzyme A ligase\tK01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]" }, { "name":"SPSPH_042580 Phenylacetate-coenzyme A ligase\tK01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]" }, { "name":"SPSPH_001500 hbd_1; (GenBank) 3-hydroxybutyryl-CoA dehydrogenase\tK00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]" }, { "name":"SPSPH_007510 hbd_2; (GenBank) 3-hydroxybutyryl-CoA dehydrogenase\tK00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]" }, { "name":"SPSPH_041810 hbd_3; (GenBank) 3-hydroxybutyryl-CoA dehydrogenase\tK00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]" }, { "name":"SPSPH_041950 hbd_4; (GenBank) 3-hydroxybutyryl-CoA dehydrogenase\tK00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]" }, { "name":"SPSPH_002080 Aspartate\/prephenate aminotransferase\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SPSPH_027470 hisC_2; (GenBank) Histidinol-phosphate aminotransferase\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"SPSPH_031330 katG; (GenBank) Catalase-peroxidase\tK03782 katG; catalase-peroxidase [EC:1.11.1.21]" } ] }, { "name":"00380 Tryptophan metabolism [PATH:ssph00380]", "children":[ { "name":"SPSPH_023930 pdhD; (GenBank) Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SPSPH_001550 thlA_1; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_007500 thlA_2; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_041940 thlA_3; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_011620 katA; (GenBank) Vegetative catalase\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"SPSPH_043550 katE; (GenBank) Catalase HPII\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"SPSPH_031330 katG; (GenBank) Catalase-peroxidase\tK03782 katG; catalase-peroxidase [EC:1.11.1.21]" } ] }, { "name":"00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ssph00400]", "children":[ { "name":"SPSPH_018870 aroF_1; (GenBank) Phospho-2-dehydro-3-deoxyheptonate aldolase\tK03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]" }, { "name":"SPSPH_023140 aroF_2; (GenBank) Phospho-2-dehydro-3-deoxyheptonate aldolase\tK03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]" }, { "name":"SPSPH_023290 aroF_3; (GenBank) Phospho-2-dehydro-3-deoxyheptonate aldolase\tK03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]" }, { "name":"SPSPH_015870 aroB; (GenBank) 3-dehydroquinate synthase\tK01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]" }, { "name":"SPSPH_020690 yqhS; (GenBank) 3-dehydroquinate dehydratase\tK03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]" }, { "name":"SPSPH_015690 aroE; (GenBank) Shikimate dehydrogenase (NADP(+))\tK00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]" }, { "name":"SPSPH_015860 aroK; (GenBank) Shikimate kinase\tK00891 aroK; shikimate kinase [EC:2.7.1.71]" }, { "name":"SPSPH_018880 aroA1; (GenBank) 3-phosphoshikimate 1-carboxyvinyltransferase 1\tK00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]" }, { "name":"SPSPH_015830 aroC; (GenBank) Chorismate synthase\tK01736 aroC; chorismate synthase [EC:4.2.3.5]" }, { "name":"SPSPH_022830 trpE; (GenBank) Anthranilate synthase component 1\tK01657 trpE; anthranilate synthase component I [EC:4.1.3.27]" }, { "name":"SPSPH_022820 pabA_2; (GenBank) Aminodeoxychorismate synthase component 2\tK01658 trpG; anthranilate synthase component II [EC:4.1.3.27]" }, { "name":"SPSPH_022880 trpD; (GenBank) Anthranilate phosphoribosyltransferase\tK00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]" }, { "name":"SPSPH_043870 trpD2; (GenBank) Anthranilate phosphoribosyltransferase 2\tK00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]" }, { "name":"SPSPH_022870 trpF_1; (GenBank) N-(5'-phosphoribosyl)anthranilate isomerase\tK01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]" }, { "name":"SPSPH_043860 trpF_2; (GenBank) N-(5'-phosphoribosyl)anthranilate isomerase\tK01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]" }, { "name":"SPSPH_022860 trpC; (GenBank) Indole-3-glycerol phosphate synthase\tK01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]" }, { "name":"SPSPH_022840 trpA; (GenBank) Tryptophan synthase alpha chain\tK01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]" }, { "name":"SPSPH_022850 trpB; (GenBank) Tryptophan synthase beta chain\tK01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]" }, { "name":"SPSPH_037450 pheA_2; (GenBank) Bifunctional chorismate mutase\/prephenate dehydratase\tK14170 pheA; chorismate mutase \/ prephenate dehydratase [EC:5.4.99.5 4.2.1.51]" }, { "name":"SPSPH_015470 aroH; (GenBank) Chorismate mutase AroH\tK06208 aroH; chorismate mutase [EC:5.4.99.5]" }, { "name":"SPSPH_019040 hypothetical protein\tK06209 pheB; chorismate mutase [EC:5.4.99.5]" }, { "name":"SPSPH_023130 tyrC; (GenBank) Cyclohexadienyl dehydrogenase\tK04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]" }, { "name":"SPSPH_022800 pheA_1; (GenBank) Bifunctional chorismate mutase\/prephenate dehydratase\tK04518 pheA2; prephenate dehydratase [EC:4.2.1.51]" }, { "name":"SPSPH_002080 Aspartate\/prephenate aminotransferase\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SPSPH_027470 hisC_2; (GenBank) Histidinol-phosphate aminotransferase\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" } ] } ] }, { "name":"09106 Metabolism of other amino acids", "children":[ { "name":"00410 beta-Alanine metabolism [PATH:ssph00410]", "children":[ { "name":"SPSPH_025930 panD; (GenBank) Aspartate 1-decarboxylase\tK01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]" }, { "name":"SPSPH_022970 argD_2; (GenBank) Acetylornithine aminotransferase\tK00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]" }, { "name":"SPSPH_025750 davT; (GenBank) 5-aminovalerate aminotransferase DavT\tK00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]" }, { "name":"SPSPH_025920 panC; (GenBank) Pantothenate synthetase\tK01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]" }, { "name":"SPSPH_035310 D-hydantoinase\tK01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]" }, { "name":"SPSPH_001540 bcd; (GenBank) Acyl-CoA dehydrogenase, short-chain specific\tK00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]" }, { "name":"SPSPH_007530 Acyl-CoA dehydrogenase, short-chain specific\tK00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]" }, { "name":"SPSPH_041870 Acyl-CoA dehydrogenase, short-chain specific\tK00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]" } ] }, { "name":"00430 Taurine and hypotaurine metabolism [PATH:ssph00430]", "children":[ { "name":"SPSPH_037980 ywrD; (GenBank) Glutathione hydrolase-like YwrD proenzyme\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]" }, { "name":"SPSPH_029660 hpa_tpa; (GenBank) Hypotaurine\/taurine--pyruvate aminotransferase\tK03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]" }, { "name":"SPSPH_026350 ald; (GenBank) Alanine dehydrogenase\tK00259 ald; alanine dehydrogenase [EC:1.4.1.1]" }, { "name":"SPSPH_010770 pduL_1; (GenBank) Phosphate propanoyltransferase\tK15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]" }, { "name":"SPSPH_021230 pduL_2; (GenBank) Phosphate propanoyltransferase\tK15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]" }, { "name":"SPSPH_016700 ackA; (GenBank) Acetate kinase\tK00925 ackA; acetate kinase [EC:2.7.2.1]" }, { "name":"SPSPH_029560 menE_2; (GenBank) 2-succinylbenzoate--CoA ligase\tK26005 sauT; sulfoacetate-CoA ligase [EC:6.2.1.-]" }, { "name":"SPSPH_029460 pflD_1; (GenBank) Trans-4-hydroxy-L-proline dehydratase\tK25261 islA; isethionate sulfite-lyase [EC:4.4.1.38]" }, { "name":"SPSPH_029620 cutC; (GenBank) Choline trimethylamine-lyase\tK25261 islA; isethionate sulfite-lyase [EC:4.4.1.38]" } ] }, { "name":"00440 Phosphonate and phosphinate metabolism" }, { "name":"00450 Selenocompound metabolism [PATH:ssph00450]", "children":[ { "name":"SPSPH_010140 mccB; (GenBank) Cystathionine gamma-lyase\tK01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]" }, { "name":"SPSPH_008720 patB_1; (GenBank) Cystathionine beta-lyase PatB\tK14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]" }, { "name":"SPSPH_010070 patB_2; (GenBank) Cystathionine beta-lyase PatB\tK14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]" }, { "name":"SPSPH_029260 patB_3; (GenBank) Cystathionine beta-lyase PatB\tK14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]" }, { "name":"SPSPH_006220 acsE_2; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_008920 acsE_3; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_027010 glmS_4; (GenBank) Glutamate mutase sigma subunit\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_027020 acsE_5; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_029030 acsE_6; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_029800 acsE_7; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_029920 methyltetrahydrofolate cobalamin methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_031020 acsE_9; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_031250 acsE_10; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_036220 metH_13; (GenBank) Methionine synthase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_037550 acsE_12; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_038100 acsE_13; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_046520 metH_18; (GenBank) Methionine synthase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_009090 trxB_1; (GenBank) Thioredoxin reductase\tK00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]" }, { "name":"SPSPH_009290 trxB_2; (GenBank) Thioredoxin reductase\tK00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]" }, { "name":"SPSPH_023690 ahpF; (GenBank) NADH dehydrogenase\tK00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]" }, { "name":"SPSPH_042160 trxB_3; (GenBank) Thioredoxin reductase\tK00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]" }, { "name":"SPSPH_035280 ygfK; (GenBank) Putative oxidoreductase YgfK\tK12527 ygfK; putative selenate reductase [EC:1.97.1.9]" }, { "name":"SPSPH_008540 ttrA; (GenBank) Tetrathionate reductase subunit A\tK27874 srdA; selenate reductase (quinol) subunit A [EC:1.97.1.14]" }, { "name":"SPSPH_008470 cysN; (GenBank) Sulfate adenylyltransferase subunit 1\tK00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]" }, { "name":"SPSPH_008460 cysD; (GenBank) Sulfate adenylyltransferase subunit 2\tK00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]" }, { "name":"SPSPH_046270 selD; (GenBank) Selenide, water dikinase\tK01008 selD; selenide, water dikinase [EC:2.7.9.3]" }, { "name":"SPSPH_009150 selA_1; (GenBank) L-seryl-tRNA(Sec) selenium transferase\tK01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]" }, { "name":"SPSPH_046400 selA_2; (GenBank) L-seryl-tRNA(Sec) selenium transferase\tK01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]" }, { "name":"SPSPH_001730 metG; (GenBank) Methionine--tRNA ligase\tK01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]" } ] }, { "name":"00460 Cyanoamino acid metabolism [PATH:ssph00460]", "children":[ { "name":"SPSPH_037980 ywrD; (GenBank) Glutathione hydrolase-like YwrD proenzyme\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]" }, { "name":"SPSPH_038220 ansB; (GenBank) Glutaminase-asparaginase\tK01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]" }, { "name":"SPSPH_033880 glyA_1; (GenBank) Serine hydroxymethyltransferase\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" }, { "name":"SPSPH_044630 glyA_2; (GenBank) Serine hydroxymethyltransferase\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" } ] }, { "name":"00470 D-Amino acid metabolism [PATH:ssph00470]", "children":[ { "name":"SPSPH_001040 alr1; (GenBank) Alanine racemase 1\tK01775 alr; alanine racemase [EC:5.1.1.1]" }, { "name":"SPSPH_016460 ddlB; (GenBank) D-alanine--D-alanine ligase B\tK01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]" }, { "name":"SPSPH_009910 yrpC; (GenBank) Glutamate racemase 2\tK01776 murI; glutamate racemase [EC:5.1.1.3]" }, { "name":"SPSPH_031870 murI_1; (GenBank) Glutamate racemase\tK01776 murI; glutamate racemase [EC:5.1.1.3]" }, { "name":"SPSPH_039010 murI_2; (GenBank) Glutamate racemase\tK01776 murI; glutamate racemase [EC:5.1.1.3]" }, { "name":"SPSPH_016410 murD; (GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase\tK01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]" }, { "name":"SPSPH_038710 L-Ala-D\/L-Glu epimerase\tK19802 ycjG; L-Ala-D\/L-Glu epimerase \/ N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]" }, { "name":"SPSPH_011040 Aspartate racemase\tK01779 racD; aspartate racemase [EC:5.1.1.13]" }, { "name":"SPSPH_021810 dapF; (GenBank) Diaminopimelate epimerase\tK01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]" }, { "name":"SPSPH_028290 lysA; (GenBank) Diaminopimelate decarboxylase\tK01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]" }, { "name":"SPSPH_005990 orr; (GenBank) Ornithine racemase\tK21898 orr; ornithine racemase [EC:5.1.1.12]" }, { "name":"SPSPH_038020 4-hydroxyproline 2-epimerase 1\tK01777 prdF; proline racemase [EC:5.1.1.4]" }, { "name":"SPSPH_038030 hypothetical protein\tK01777 prdF; proline racemase [EC:5.1.1.4]" }, { "name":"SPSPH_038070 putative trans-3-hydroxy-L-proline dehydratase\tK01777 prdF; proline racemase [EC:5.1.1.4]" } ] }, { "name":"00480 Glutathione metabolism [PATH:ssph00480]", "children":[ { "name":"SPSPH_037980 ywrD; (GenBank) Glutathione hydrolase-like YwrD proenzyme\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]" }, { "name":"SPSPH_025050 pxpA; (GenBank) 5-oxoprolinase subunit A\tK07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]" }, { "name":"SPSPH_018110 pepA; (GenBank) Cytosol aminopeptidase\tK01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]" }, { "name":"SPSPH_022780 ghrB; (GenBank) Glyoxylate\/hydroxypyruvate reductase B\tK00032 E1.1.1.43; phosphogluconate 2-dehydrogenase [EC:1.1.1.43]" }, { "name":"SPSPH_001490 ldc; (GenBank) Lysine\/ornithine decarboxylase\tK01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]" }, { "name":"SPSPH_032260 speE; (GenBank) Polyamine aminopropyltransferase\tK00797 speE; spermidine synthase [EC:2.5.1.16]" } ] } ] }, { "name":"09107 Glycan biosynthesis and metabolism", "children":[ { "name":"00520 Amino sugar and nucleotide sugar metabolism [PATH:ssph00520]", "children":[ { "name":"SPSPH_001980 glmU_1; (GenBank) Bifunctional protein GlmU\tK04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase \/ glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]" }, { "name":"SPSPH_033830 mnaA; (GenBank) UDP-N-acetylglucosamine 2-epimerase\tK01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]" }, { "name":"SPSPH_016450 murA1; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1\tK00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]" }, { "name":"SPSPH_033720 murAA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1\tK00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]" }, { "name":"SPSPH_023060 murB; (GenBank) UDP-N-acetylenolpyruvoylglucosamine reductase\tK00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]" }, { "name":"SPSPH_028280 hypothetical protein\tK00844 HK; hexokinase [EC:2.7.1.1]" }, { "name":"SPSPH_005220 glmM; (GenBank) Phosphoglucosamine mutase\tK03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]" }, { "name":"SPSPH_005230 glmS_1; (GenBank) Glutamine--fructose-6-phosphate aminotransferase [isomerizing]\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]" }, { "name":"SPSPH_032780 pgi; (GenBank) Glucose-6-phosphate isomerase\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]" }, { "name":"SPSPH_032810 algA; (GenBank) Alginate biosynthesis protein AlgA\tK16011 algA; mannose-1-phosphate guanylyltransferase \/ mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]" }, { "name":"SPSPH_032830 wbgU; (GenBank) UDP-N-acetylglucosamine 4-epimerase\tK08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]" }, { "name":"SPSPH_040790 algC_2; (GenBank) Phosphomannomutase\/phosphoglucomutase\tK15778 pmm-pgm; phosphomannomutase \/ phosphoglucomutase [EC:5.4.2.8 5.4.2.2]" }, { "name":"SPSPH_032790 gtaB; (GenBank) UTP--glucose-1-phosphate uridylyltransferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]" }, { "name":"SPSPH_032840 ywqF; (GenBank) UDP-glucose 6-dehydrogenase YwqF\tK00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]" }, { "name":"SPSPH_013520 galE; (GenBank) UDP-glucose 4-epimerase\tK01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]" }, { "name":"SPSPH_016020 UDP-glucose 4-epimerase\tK01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]" }, { "name":"SPSPH_032800 algC_1; (GenBank) Phosphomannomutase\/phosphoglucomutase\tK01840 manB; phosphomannomutase [EC:5.4.2.8]" }, { "name":"SPSPH_000940 glgC_1; (GenBank) Glucose-1-phosphate adenylyltransferase\tK00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]" }, { "name":"SPSPH_001090 glgC_2; (GenBank) Glucose-1-phosphate adenylyltransferase\tK00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]" }, { "name":"SPSPH_001110 glgC_3; (GenBank) Glucose-1-phosphate adenylyltransferase\tK00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]" }, { "name":"SPSPH_001120 glgD; (GenBank) Glycogen biosynthesis protein GlgD\tK00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]" }, { "name":"SPSPH_026370 glgC_4; (GenBank) Glucose-1-phosphate adenylyltransferase\tK00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]" }, { "name":"SPSPH_041160 rmlA; (GenBank) Glucose-1-phosphate thymidylyltransferase\tK00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]" } ] }, { "name":"00541 Biosynthesis of various nucleotide sugars [PATH:ssph00541]", "children":[ { "name":"SPSPH_001980 glmU_1; (GenBank) Bifunctional protein GlmU\tK04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase \/ glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]" }, { "name":"SPSPH_007260 wbpA; (GenBank) UDP-N-acetyl-D-glucosamine 6-dehydrogenase\tK02474 wbpO; UDP-N-acetyl-D-glucosamine\/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]" }, { "name":"SPSPH_032530 pseB; (GenBank) UDP-N-acetylglucosamine 4,6-dehydratase (inverting)\tK15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.115]" }, { "name":"SPSPH_032510 neuA; (GenBank) CMP-N,N'-diacetyllegionaminic acid synthase\tK15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]" }, { "name":"SPSPH_033280 kdsD; (GenBank) Arabinose 5-phosphate isomerase KdsD\tK06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]" }, { "name":"SPSPH_033290 kdsA; (GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase\tK01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]" }, { "name":"SPSPH_033270 kdsC; (GenBank) 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC\tK03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]" }, { "name":"SPSPH_033300 kdsB; (GenBank) 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase\tK00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]" }, { "name":"SPSPH_033830 mnaA; (GenBank) UDP-N-acetylglucosamine 2-epimerase\tK01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]" }, { "name":"SPSPH_033130 hldE; (GenBank) Bifunctional protein HldE\tK21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]" }, { "name":"SPSPH_033120 D-beta-D-heptose 1-phosphate adenylyltransferase\tK21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]" }, { "name":"SPSPH_032790 gtaB; (GenBank) UTP--glucose-1-phosphate uridylyltransferase\tK00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]" }, { "name":"SPSPH_032840 ywqF; (GenBank) UDP-glucose 6-dehydrogenase YwqF\tK00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]" }, { "name":"SPSPH_041160 rmlA; (GenBank) Glucose-1-phosphate thymidylyltransferase\tK00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]" }, { "name":"SPSPH_041170 rffG; (GenBank) dTDP-glucose 4,6-dehydratase 2\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"SPSPH_041150 rmlC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]" }, { "name":"SPSPH_041140 rmlD; (GenBank) dTDP-4-dehydrorhamnose reductase\tK00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]" }, { "name":"SPSPH_032810 algA; (GenBank) Alginate biosynthesis protein AlgA\tK16011 algA; mannose-1-phosphate guanylyltransferase \/ mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]" }, { "name":"SPSPH_032860 gmd; (GenBank) GDP-mannose 4,6-dehydratase\tK01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]" }, { "name":"SPSPH_032850 fcl; (GenBank) GDP-L-fucose synthase\tK02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]" } ] }, { "name":"00510 N-Glycan biosynthesis" }, { "name":"00513 Various types of N-glycan biosynthesis" }, { "name":"00512 Mucin type O-glycan biosynthesis" }, { "name":"00515 Mannose type O-glycan biosynthesis" }, { "name":"00514 Other types of O-glycan biosynthesis" }, { "name":"00532 Glycosaminoglycan biosynthesis - chondroitin sulfate \/ dermatan sulfate" }, { "name":"00534 Glycosaminoglycan biosynthesis - heparan sulfate \/ heparin" }, { "name":"00533 Glycosaminoglycan biosynthesis - keratan sulfate" }, { "name":"00531 Glycosaminoglycan degradation" }, { "name":"00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis" }, { "name":"00601 Glycosphingolipid biosynthesis - lacto and neolacto series" }, { "name":"00603 Glycosphingolipid biosynthesis - globo and isoglobo series" }, { "name":"00604 Glycosphingolipid biosynthesis - ganglio series" }, { "name":"00511 Other glycan degradation" }, { "name":"00540 Lipopolysaccharide biosynthesis [PATH:ssph00540]", "children":[ { "name":"SPSPH_033350 lpxA; (GenBank) Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase\tK00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]" }, { "name":"SPSPH_033370 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase\tK02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]" }, { "name":"SPSPH_033420 lpxD; (GenBank) UDP-3-O-acylglucosamine N-acyltransferase\tK02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]" }, { "name":"SPSPH_033340 lpxI; (GenBank) UDP-2,3-diacylglucosamine pyrophosphatase LpxI\tK09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]" }, { "name":"SPSPH_033330 lpxB; (GenBank) Lipid-A-disaccharide synthase\tK00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]" }, { "name":"SPSPH_033310 lpxK; (GenBank) Tetraacyldisaccharide 4'-kinase\tK02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]" }, { "name":"SPSPH_033260 lpxL_1; (GenBank) Lipid A biosynthesis lauroyltransferase\tK02517 lpxL; Kdo2-lipid IVA lauroyltransferase\/acyltransferase [EC:2.3.1.241 2.3.1.-]" }, { "name":"SPSPH_033400 lpxL_2; (GenBank) Lipid A biosynthesis lauroyltransferase\tK02517 lpxL; Kdo2-lipid IVA lauroyltransferase\/acyltransferase [EC:2.3.1.241 2.3.1.-]" }, { "name":"SPSPH_013300 rfaQ; (GenBank) Lipopolysaccharide core heptosyltransferase RfaQ\tK02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]" }, { "name":"SPSPH_033110 rfaF_2; (GenBank) ADP-heptose--LPS heptosyltransferase 2\tK02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]" } ] }, { "name":"00542 O-Antigen repeat unit biosynthesis [PATH:ssph00542]", "children":[ { "name":"SPSPH_033840 tagO; (GenBank) putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase\tK02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate\/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]" } ] }, { "name":"00550 Peptidoglycan biosynthesis [PATH:ssph00550]", "children":[ { "name":"SPSPH_016450 murA1; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1\tK00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]" }, { "name":"SPSPH_033720 murAA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1\tK00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]" }, { "name":"SPSPH_023060 murB; (GenBank) UDP-N-acetylenolpyruvoylglucosamine reductase\tK00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]" }, { "name":"SPSPH_016440 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase\tK01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]" }, { "name":"SPSPH_016410 murD; (GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase\tK01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]" }, { "name":"SPSPH_002550 murE_1; (GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase\tK01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]" }, { "name":"SPSPH_016380 murE_2; (GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase\tK01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]" }, { "name":"SPSPH_016460 ddlB; (GenBank) D-alanine--D-alanine ligase B\tK01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]" }, { "name":"SPSPH_016390 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase\tK01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]" }, { "name":"SPSPH_017630 uppS; (GenBank) Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific)\tK00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]" }, { "name":"SPSPH_004420 uppP; (GenBank) Undecaprenyl-diphosphatase\tK06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]" }, { "name":"SPSPH_016400 mraY; (GenBank) Phospho-N-acetylmuramoyl-pentapeptide-transferase\tK01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]" }, { "name":"SPSPH_016430 murG; (GenBank) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase\tK02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]" }, { "name":"SPSPH_020110 pbpF; (GenBank) Penicillin-binding protein 1F\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"SPSPH_016420 ftsW_1; (GenBank) putative peptidoglycan glycosyltransferase FtsW\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"SPSPH_021620 rodA; (GenBank) putative FtsW-like protein\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"SPSPH_044110 ftsW_2; (GenBank) putative peptidoglycan glycosyltransferase FtsW\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"SPSPH_014820 mrdB; (GenBank) Peptidoglycan glycosyltransferase MrdB\tK05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"SPSPH_014770 mrdA_1; (GenBank) Peptidoglycan D,D-transpeptidase MrdA\tK05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]" }, { "name":"SPSPH_041060 mrdA_2; (GenBank) Peptidoglycan D,D-transpeptidase MrdA\tK05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]" }, { "name":"SPSPH_000980 spoVD_1; (GenBank) Stage V sporulation protein D\tK08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)" }, { "name":"SPSPH_016370 spoVD_2; (GenBank) Stage V sporulation protein D\tK08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)" }, { "name":"SPSPH_020680 spoVD_3; (GenBank) Stage V sporulation protein D\tK08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)" }, { "name":"SPSPH_021610 pbpA; (GenBank) Penicillin-binding protein A\tK05364 pbpA; penicillin-binding protein A" }, { "name":"SPSPH_001060 hypothetical protein\tK07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5\/6) [EC:3.4.16.4]" }, { "name":"SPSPH_018590 dacF; (GenBank) D-alanyl-D-alanine carboxypeptidase DacF\tK07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5\/6) [EC:3.4.16.4]" }, { "name":"SPSPH_018790 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase DacB\tK07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5\/6) [EC:3.4.16.4]" } ] }, { "name":"00552 Teichoic acid biosynthesis [PATH:ssph00552]", "children":[ { "name":"SPSPH_004420 uppP; (GenBank) Undecaprenyl-diphosphatase\tK06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]" }, { "name":"SPSPH_033840 tagO; (GenBank) putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase\tK02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate\/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]" }, { "name":"SPSPH_021380 tagA; (GenBank) N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase\tK05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]" }, { "name":"SPSPH_015010 tagU_1; (GenBank) Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU\tK01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]" }, { "name":"SPSPH_041070 tagU_2; (GenBank) Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU\tK01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]" }, { "name":"SPSPH_003580 ugtP_1; (GenBank) Processive diacylglycerol beta-glucosyltransferase\tK03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]" }, { "name":"SPSPH_017100 ugtP_2; (GenBank) Processive diacylglycerol beta-glucosyltransferase\tK03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]" } ] }, { "name":"00571 Lipoarabinomannan (LAM) biosynthesis" }, { "name":"00572 Arabinogalactan biosynthesis - Mycobacterium", "children":[ { "name":"SPSPH_033840 tagO; (GenBank) putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase\tK02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate\/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]" } ] }, { "name":"00543 Exopolysaccharide biosynthesis [PATH:ssph00543]", "children":[ { "name":"SPSPH_033840 tagO; (GenBank) putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase\tK02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate\/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]" }, { "name":"SPSPH_013450 pgaC; (GenBank) Poly-beta-1,6-N-acetyl-D-glucosamine synthase\tK11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]" }, { "name":"SPSPH_004280 cysE; (GenBank) Serine acetyltransferase\tK00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]" } ] } ] }, { "name":"09108 Metabolism of cofactors and vitamins", "children":[ { "name":"00730 Thiamine metabolism [PATH:ssph00730]", "children":[ { "name":"SPSPH_037190 bzaF; (GenBank) 5-hydroxybenzimidazole synthase\tK03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]" }, { "name":"SPSPH_000750 thiD; (GenBank) Hydroxymethylpyrimidine\/phosphomethylpyrimidine kinase\tK00941 thiD; hydroxymethylpyrimidine\/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]" }, { "name":"SPSPH_020520 iscS; (GenBank) Cysteine desulfurase IscS\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]" }, { "name":"SPSPH_024790 mqnC_2; (GenBank) Cyclic dehypoxanthine futalosine synthase\tK03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]" }, { "name":"SPSPH_039400 thiH; (GenBank) 2-iminoacetate synthase\tK03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]" }, { "name":"SPSPH_020910 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase\tK01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]" }, { "name":"SPSPH_039410 thiG; (GenBank) Thiazole synthase\tK03149 thiG; thiazole synthase [EC:2.8.1.10]" }, { "name":"SPSPH_044580 thiM; (GenBank) Hydroxyethylthiazole kinase\tK00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]" }, { "name":"SPSPH_039390 thiE_1; (GenBank) Thiamine-phosphate synthase\tK00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]" }, { "name":"SPSPH_044570 thiE_2; (GenBank) Thiamine-phosphate synthase\tK00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]" }, { "name":"SPSPH_012090 thiL; (GenBank) Thiamine-monophosphate kinase\tK00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]" }, { "name":"SPSPH_021590 rsgA_1; (GenBank) Small ribosomal subunit biogenesis GTPase RsgA\tK06949 rsgA; ribosome biogenesis GTPase \/ thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]" }, { "name":"SPSPH_029730 rsgA_2; (GenBank) Small ribosomal subunit biogenesis GTPase RsgA\tK06949 rsgA; ribosome biogenesis GTPase \/ thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]" }, { "name":"SPSPH_026510 phoA_1; (GenBank) Alkaline phosphatase 4\tK01077 ALP; alkaline phosphatase [EC:3.1.3.1]" }, { "name":"SPSPH_046100 phoA_2; (GenBank) Alkaline phosphatase 4\tK01077 ALP; alkaline phosphatase [EC:3.1.3.1]" }, { "name":"SPSPH_004860 adk; (GenBank) Adenylate kinase\tK00939 adk; adenylate kinase [EC:2.7.4.3]" } ] }, { "name":"00740 Riboflavin metabolism [PATH:ssph00740]", "children":[ { "name":"SPSPH_021550 ribBA; (GenBank) Riboflavin biosynthesis protein RibBA\tK14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase \/ GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]" }, { "name":"SPSPH_021570 ribD; (GenBank) Riboflavin biosynthesis protein RibD\tK11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase \/ 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]" }, { "name":"SPSPH_035800 ribB; (GenBank) 3,4-dihydroxy-2-butanone 4-phosphate synthase\tK02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]" }, { "name":"SPSPH_021540 ribH; (GenBank) 6,7-dimethyl-8-ribityllumazine synthase\tK00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]" }, { "name":"SPSPH_021560 ribE; (GenBank) Riboflavin synthase\tK00793 ribE; riboflavin synthase [EC:2.5.1.9]" }, { "name":"SPSPH_017790 ribF; (GenBank) Bifunctional riboflavin kinase\/FMN adenylyltransferase\tK11753 ribF; riboflavin kinase \/ FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]" }, { "name":"SPSPH_044580 thiM; (GenBank) Hydroxyethylthiazole kinase\tK00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]" }, { "name":"SPSPH_018270 nudF; (GenBank) ADP-ribose pyrophosphatase\tK01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]" }, { "name":"SPSPH_039270 shdB; (GenBank) putative UbiX-like flavin prenyltransferase\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]" } ] }, { "name":"00750 Vitamin B6 metabolism [PATH:ssph00750]", "children":[ { "name":"SPSPH_010970 pdxK; (GenBank) Pyridoxine kinase\tK00868 pdxK; pyridoxine kinase [EC:2.7.1.35]" }, { "name":"SPSPH_042200 serC; (GenBank) Phosphoserine aminotransferase\tK00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]" }, { "name":"SPSPH_036350 pdxA2_2; (GenBank) D-threonate 4-phosphate dehydrogenase\tK00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]" }, { "name":"SPSPH_005340 thrC_1; (GenBank) Threonine synthase\tK01733 thrC; threonine synthase [EC:4.2.3.1]" }, { "name":"SPSPH_009690 thrC_2; (GenBank) Threonine synthase\tK01733 thrC; threonine synthase [EC:4.2.3.1]" }, { "name":"SPSPH_024650 thrC_3; (GenBank) Threonine synthase\tK01733 thrC; threonine synthase [EC:4.2.3.1]" }, { "name":"SPSPH_037170 pdxS; (GenBank) Pyridoxal 5'-phosphate synthase subunit PdxS\tK06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]" }, { "name":"SPSPH_037180 pdxT; (GenBank) Pyridoxal 5'-phosphate synthase subunit PdxT\tK08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]" } ] }, { "name":"00760 Nicotinate and nicotinamide metabolism [PATH:ssph00760]", "children":[ { "name":"SPSPH_023850 nadC; (GenBank) putative nicotinate-nucleotide pyrophosphorylase [carboxylating]\tK00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]" }, { "name":"SPSPH_017060 pncB1; (GenBank) Nicotinate phosphoribosyltransferase pncB1\tK00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]" }, { "name":"SPSPH_038250 hypothetical protein\tK00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]" }, { "name":"SPSPH_023430 hypothetical protein\tK01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]" }, { "name":"SPSPH_021320 surE; (GenBank) 5'-nucleotidase SurE\tK03787 surE; 5'\/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]" }, { "name":"SPSPH_014980 nadD_1; (GenBank) Nicotinate-nucleotide adenylyltransferase\tK00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]" }, { "name":"SPSPH_038290 nadD_2; (GenBank) Nicotinate-nucleotide adenylyltransferase\tK00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]" }, { "name":"SPSPH_039240 nudC_3; (GenBank) NADH pyrophosphatase\tK03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]" }, { "name":"SPSPH_038280 nadE_3; (GenBank) NH(3)-dependent NAD(+) synthetase\tK01916 nadE; NAD+ synthase [EC:6.3.1.5]" }, { "name":"SPSPH_024710 nadE_2; (GenBank) Glutamine-dependent NAD(+) synthetase\tK01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]" }, { "name":"SPSPH_020930 nadK_1; (GenBank) NAD kinase\tK00858 ppnK; NAD+ kinase [EC:2.7.1.23]" }, { "name":"SPSPH_038260 nadK_2; (GenBank) NAD kinase\tK00858 ppnK; NAD+ kinase [EC:2.7.1.23]" }, { "name":"SPSPH_010430 ndhS; (GenBank) Nicotinate dehydrogenase small FeS subunit\tK20446 ndhS; nicotinate dehydrogenase small FeS subunit [EC:1.17.1.5]" }, { "name":"SPSPH_035110 hnr; (GenBank) 6-hydroxynicotinate reductase\tK20449 hnr; 6-hydroxynicotinate reductase [EC:1.3.7.1]" }, { "name":"SPSPH_035220 ena_1; (GenBank) Enamidase\tK15358 ena; enamidase [EC:3.5.2.18]" }, { "name":"SPSPH_035230 ena_2; (GenBank) Enamidase\tK15358 ena; enamidase [EC:3.5.2.18]" }, { "name":"SPSPH_035210 hgd; (GenBank) 2-(hydroxymethyl)glutarate dehydrogenase\tK19647 hgd; 2-hydroxymethylglutarate dehydrogenase [EC:1.1.1.291]" }, { "name":"SPSPH_035140 mgm; (GenBank) 2-methyleneglutarate mutase\tK20450 mgm; 2-methyleneglutarate mutase [EC:5.4.99.4]" }, { "name":"SPSPH_035180 mii; (GenBank) 3-methylitaconate isomerase\tK20451 mii; methylitaconate Delta-isomerase [EC:5.3.3.6]" }, { "name":"SPSPH_035170 dml; (GenBank) 2,3-dimethylmalate lyase\tK20454 dml; 2,3-dimethylmalate lyase [EC:4.1.3.32]" } ] }, { "name":"00770 Pantothenate and CoA biosynthesis [PATH:ssph00770]", "children":[ { "name":"SPSPH_023360 ilvB_1; (GenBank) Acetolactate synthase isozyme 1 large subunit\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SPSPH_037740 ilvB_2; (GenBank) Acetolactate synthase large subunit\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SPSPH_042500 ilvB_3; (GenBank) Acetolactate synthase large subunit\tK01652 E2.2.1.6L; acetolactate synthase I\/II\/III large subunit [EC:2.2.1.6]" }, { "name":"SPSPH_037730 ilvH_1; (GenBank) Putative acetolactate synthase small subunit\tK01653 E2.2.1.6S; acetolactate synthase I\/III small subunit [EC:2.2.1.6]" }, { "name":"SPSPH_042560 ilvH_2; (GenBank) Putative acetolactate synthase small subunit\tK01653 E2.2.1.6S; acetolactate synthase I\/III small subunit [EC:2.2.1.6]" }, { "name":"SPSPH_042550 ilvC; (GenBank) Ketol-acid reductoisomerase (NAD(+))\tK00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]" }, { "name":"SPSPH_000260 ilvD_1; (GenBank) Dihydroxy-acid dehydratase\tK01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]" }, { "name":"SPSPH_005510 ilvD_2; (GenBank) Dihydroxy-acid dehydratase\tK01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]" }, { "name":"SPSPH_005580 ilvD_3; (GenBank) Dihydroxy-acid dehydratase\tK01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]" }, { "name":"SPSPH_005610 ilvD_4; (GenBank) Dihydroxy-acid dehydratase\tK01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]" }, { "name":"SPSPH_031950 ilvD_5; (GenBank) Dihydroxy-acid dehydratase\tK01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]" }, { "name":"SPSPH_000360 panB_1; (GenBank) 3-methyl-2-oxobutanoate hydroxymethyltransferase\tK00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]" }, { "name":"SPSPH_005520 panB_2; (GenBank) 3-methyl-2-oxobutanoate hydroxymethyltransferase\tK00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]" }, { "name":"SPSPH_005530 panB_3; (GenBank) 3-methyl-2-oxobutanoate hydroxymethyltransferase\tK00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]" }, { "name":"SPSPH_005620 panB_4; (GenBank) 3-methyl-2-oxobutanoate hydroxymethyltransferase\tK00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]" }, { "name":"SPSPH_034560 panB_5; (GenBank) 3-methyl-2-oxobutanoate hydroxymethyltransferase\tK00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]" }, { "name":"SPSPH_036280 panB_6; (GenBank) 3-methyl-2-oxobutanoate hydroxymethyltransferase\tK00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]" }, { "name":"SPSPH_037500 panB_7; (GenBank) 3-methyl-2-oxobutanoate hydroxymethyltransferase\tK00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]" }, { "name":"SPSPH_000380 panE; (GenBank) 2-dehydropantoate 2-reductase\tK00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]" }, { "name":"SPSPH_025920 panC; (GenBank) Pantothenate synthetase\tK01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]" }, { "name":"SPSPH_003870 coaX; (GenBank) Type III pantothenate kinase\tK03525 coaX; type III pantothenate kinase [EC:2.7.1.33]" }, { "name":"SPSPH_021750 coaBC_2; (GenBank) Coenzyme A biosynthesis bifunctional protein CoaBC\tK13038 coaBC; phosphopantothenoylcysteine decarboxylase \/ phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]" }, { "name":"SPSPH_016650 coaD; (GenBank) Phosphopantetheine adenylyltransferase\tK00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]" }, { "name":"SPSPH_022500 coaE; (GenBank) Dephospho-CoA kinase\tK00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]" }, { "name":"SPSPH_012010 acpS; (GenBank) Holo-[acyl-carrier-protein] synthase\tK00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]" }, { "name":"SPSPH_039820 sfp; (GenBank) 4'-phosphopantetheinyl transferase Sfp\tK06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]" }, { "name":"SPSPH_005180 ilvK; (GenBank) Branched-chain-amino-acid aminotransferase 2\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"SPSPH_014050 ilvE; (GenBank) Branched-chain-amino-acid aminotransferase\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"SPSPH_035310 D-hydantoinase\tK01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]" }, { "name":"SPSPH_025930 panD; (GenBank) Aspartate 1-decarboxylase\tK01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]" } ] }, { "name":"00780 Biotin metabolism [PATH:ssph00780]", "children":[ { "name":"SPSPH_016810 fabF; (GenBank) 3-oxoacyl-[acyl-carrier-protein] synthase 2\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"SPSPH_001590 fabG_1; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase FabG\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SPSPH_005640 fabG2; (GenBank) putative oxidoreductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SPSPH_016780 fabG_2; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SPSPH_033360 fabZ; (GenBank) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ\tK02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]" }, { "name":"SPSPH_013050 bioW; (GenBank) 6-carboxyhexanoate--CoA ligase\tK01906 bioW; 6-carboxyhexanoate--CoA ligase [EC:6.2.1.14]" }, { "name":"SPSPH_013080 bioK; (GenBank) L-Lysine--8-amino-7-oxononanoate transaminase\tK00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]" }, { "name":"SPSPH_013070 bioD1; (GenBank) ATP-dependent dethiobiotin synthetase BioD 1\tK01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]" }, { "name":"SPSPH_010150 [FeFe] hydrogenase maturase subunit HydE\tK01012 bioB; biotin synthase [EC:2.8.1.6]" }, { "name":"SPSPH_013030 bioB_1; (GenBank) Biotin synthase\tK01012 bioB; biotin synthase [EC:2.8.1.6]" }, { "name":"SPSPH_029680 bioB_2; (GenBank) Biotin synthase\tK01012 bioB; biotin synthase [EC:2.8.1.6]" }, { "name":"SPSPH_003850 birA; (GenBank) Bifunctional ligase\/repressor BirA\tK03524 birA; BirA family transcriptional regulator, biotin operon repressor \/ biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]" } ] }, { "name":"00785 Lipoic acid metabolism [PATH:ssph00785]", "children":[ { "name":"SPSPH_028720 lipB; (GenBank) Octanoyltransferase\tK03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]" }, { "name":"SPSPH_028740 lipA; (GenBank) Lipoyl synthase\tK03644 lipA; lipoyl synthase [EC:2.8.1.8]" }, { "name":"SPSPH_028630 hypothetical protein\tK09711 lipS1; lipoyl synthase" }, { "name":"SPSPH_028640 hypothetical protein\tK24689 lipS2; lipoyl synthase" }, { "name":"SPSPH_023920 Lipoate--protein ligase 1\tK03800 lplA; lipoate---protein ligase [EC:6.3.1.20]" }, { "name":"SPSPH_028620 lipM_1; (GenBank) Octanoyltransferase LipM\tK03800 lplA; lipoate---protein ligase [EC:6.3.1.20]" }, { "name":"SPSPH_028660 lipM_2; (GenBank) Octanoyltransferase LipM\tK03800 lplA; lipoate---protein ligase [EC:6.3.1.20]" }, { "name":"SPSPH_028710 lipM_3; (GenBank) Octanoyltransferase LipM\tK03800 lplA; lipoate---protein ligase [EC:6.3.1.20]" }, { "name":"SPSPH_023930 pdhD; (GenBank) Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SPSPH_028760 pdhC; (GenBank) Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex\tK00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]" }, { "name":"SPSPH_028670 gcvH_1; (GenBank) Glycine cleavage system H protein\tK02437 gcvH; glycine cleavage system H protein" }, { "name":"SPSPH_028700 gcvH_2; (GenBank) Glycine cleavage system H protein\tK02437 gcvH; glycine cleavage system H protein" } ] }, { "name":"00790 Folate biosynthesis [PATH:ssph00790]", "children":[ { "name":"SPSPH_015990 folE2; (GenBank) GTP cyclohydrolase FolE2\tK09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]" }, { "name":"SPSPH_026510 phoA_1; (GenBank) Alkaline phosphatase 4\tK01077 ALP; alkaline phosphatase [EC:3.1.3.1]" }, { "name":"SPSPH_046100 phoA_2; (GenBank) Alkaline phosphatase 4\tK01077 ALP; alkaline phosphatase [EC:3.1.3.1]" }, { "name":"SPSPH_017080 folB; (GenBank) Dihydroneopterin aldolase\tK01633 folB; 7,8-dihydroneopterin aldolase\/epimerase\/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]" }, { "name":"SPSPH_017090 folK; (GenBank) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase\tK00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]" }, { "name":"SPSPH_017070 hypothetical protein\tK00796 folP; dihydropteroate synthase [EC:2.5.1.15]" }, { "name":"SPSPH_014260 fpgS; (GenBank) Folylpolyglutamate synthase\tK11754 folC; dihydrofolate synthase \/ folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]" }, { "name":"SPSPH_021550 ribBA; (GenBank) Riboflavin biosynthesis protein RibBA\tK14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase \/ GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]" }, { "name":"SPSPH_014040 pabB; (GenBank) Aminodeoxychorismate synthase component 1\tK01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]" }, { "name":"SPSPH_014030 pabA_1; (GenBank) Aminodeoxychorismate\/anthranilate synthase component 2\tK25575 pabA; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component II [EC:2.6.1.123]" }, { "name":"SPSPH_021340 hypothetical protein\tK01737 queD; 6-pyruvoyltetrahydropterin\/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]" }, { "name":"SPSPH_021330 queE; (GenBank) 7-carboxy-7-deazaguanine synthase\tK10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]" }, { "name":"SPSPH_015980 queC; (GenBank) 7-cyano-7-deazaguanine synthase\tK06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]" }, { "name":"SPSPH_037920 hypothetical protein\tK06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]" }, { "name":"SPSPH_023240 moaA2; (GenBank) GTP 3',8-cyclase 2\tK03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]" }, { "name":"SPSPH_023210 moaC; (GenBank) Cyclic pyranopterin monophosphate synthase\tK03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]" }, { "name":"SPSPH_023190 mog; (GenBank) Molybdopterin adenylyltransferase\tK03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]" }, { "name":"SPSPH_014080 moeA_1; (GenBank) Molybdopterin molybdenumtransferase\tK03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]" }, { "name":"SPSPH_014440 moeA_2; (GenBank) Molybdopterin molybdenumtransferase\tK03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]" }, { "name":"SPSPH_014450 hypothetical protein\tK03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]" }, { "name":"SPSPH_034790 glmU_2; (GenBank) Bifunctional protein GlmU\tK07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]" } ] }, { "name":"00670 One carbon pool by folate [PATH:ssph00670]", "children":[ { "name":"SPSPH_002200 fhs_1; (GenBank) Formate--tetrahydrofolate ligase\tK01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]" }, { "name":"SPSPH_013860 fhs_2; (GenBank) Formate--tetrahydrofolate ligase\tK01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]" }, { "name":"SPSPH_013830 folD; (GenBank) Bifunctional protein FolD protein\tK01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) \/ methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]" }, { "name":"SPSPH_003200 fchA_1; (GenBank) Methenyltetrahydrofolate cyclohydrolase\tK01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]" }, { "name":"SPSPH_013220 fchA_2; (GenBank) Methenyltetrahydrofolate cyclohydrolase\tK01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]" }, { "name":"SPSPH_013820 fchA_3; (GenBank) Methenyltetrahydrofolate cyclohydrolase\tK01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]" }, { "name":"SPSPH_039250 hypothetical protein\tK01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]" }, { "name":"SPSPH_040910 hypothetical protein\tK01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]" }, { "name":"SPSPH_033880 glyA_1; (GenBank) Serine hydroxymethyltransferase\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" }, { "name":"SPSPH_044630 glyA_2; (GenBank) Serine hydroxymethyltransferase\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" }, { "name":"SPSPH_012920 purN; (GenBank) Phosphoribosylglycinamide formyltransferase\tK11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]" }, { "name":"SPSPH_012930 purH; (GenBank) Bifunctional purine biosynthesis protein PurH\tK00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase \/ IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]" }, { "name":"SPSPH_003210 Glutamate formimidoyltransferase\tK00603 fctD; glutamate formiminotransferase \/ 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]" }, { "name":"SPSPH_013210 Glutamate formimidoyltransferase\tK00603 fctD; glutamate formiminotransferase \/ 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]" }, { "name":"SPSPH_006220 acsE_2; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_008920 acsE_3; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_027010 glmS_4; (GenBank) Glutamate mutase sigma subunit\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_027020 acsE_5; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_029030 acsE_6; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_029800 acsE_7; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_029920 methyltetrahydrofolate cobalamin methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_031020 acsE_9; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_031250 acsE_10; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_036220 metH_13; (GenBank) Methionine synthase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_037550 acsE_12; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_038100 acsE_13; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_046520 metH_18; (GenBank) Methionine synthase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_008890 mtgA_2; (GenBank) Methylcorrinoid:tetrahydrofolate methyltransferase\tK25221 mtgA; [methyl-Co(III) glycine betaine-specific corrinoid protein]---tetrahydrofolate methyltransferase [EC:2.1.1.378]" }, { "name":"SPSPH_004310 thyX; (GenBank) Flavin-dependent thymidylate synthase\tK03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]" }, { "name":"SPSPH_008840 hypothetical protein\tK00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]" }, { "name":"SPSPH_013990 yitJ; (GenBank) Bifunctional homocysteine S-methyltransferase\/5,10-methylenetetrahydrofolate reductase\tK00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]" }, { "name":"SPSPH_043820 hypothetical protein\tK00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]" }, { "name":"SPSPH_020320 yqgN; (GenBank) putative protein YqgN\tK01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]" }, { "name":"SPSPH_021740 metK; (GenBank) S-adenosylmethionine synthase\tK00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]" }, { "name":"SPSPH_021270 ahcY; (GenBank) Adenosylhomocysteinase\tK01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]" }, { "name":"SPSPH_023930 pdhD; (GenBank) Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SPSPH_028670 gcvH_1; (GenBank) Glycine cleavage system H protein\tK02437 gcvH; glycine cleavage system H protein" }, { "name":"SPSPH_028700 gcvH_2; (GenBank) Glycine cleavage system H protein\tK02437 gcvH; glycine cleavage system H protein" } ] }, { "name":"00830 Retinol metabolism" }, { "name":"00860 Porphyrin metabolism [PATH:ssph00860]", "children":[ { "name":"SPSPH_034290 gltX1; (GenBank) Glutamate--tRNA ligase 1\tK01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]" }, { "name":"SPSPH_041040 hemA_2; (GenBank) Glutamyl-tRNA reductase\tK02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]" }, { "name":"SPSPH_041000 hemL; (GenBank) Glutamate-1-semialdehyde 2,1-aminomutase\tK01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]" }, { "name":"SPSPH_041010 hemB; (GenBank) Delta-aminolevulinic acid dehydratase\tK01698 hemB; porphobilinogen synthase [EC:4.2.1.24]" }, { "name":"SPSPH_041030 hemC; (GenBank) Porphobilinogen deaminase\tK01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]" }, { "name":"SPSPH_008660 hemE_1; (GenBank) Uroporphyrinogen decarboxylase\tK01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]" }, { "name":"SPSPH_009550 hemE_4; (GenBank) Uroporphyrinogen decarboxylase\tK01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]" }, { "name":"SPSPH_009590 hemE_5; (GenBank) Uroporphyrinogen decarboxylase\tK01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]" }, { "name":"SPSPH_037070 hypothetical protein\tK01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]" }, { "name":"SPSPH_042960 hemE_8; (GenBank) Uroporphyrinogen decarboxylase\tK01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]" }, { "name":"SPSPH_041020 cysG_1; (GenBank) Siroheme synthase\tK13542 cobA-hemD; uroporphyrinogen III methyltransferase \/ synthase [EC:2.1.1.107 4.2.1.75]" }, { "name":"SPSPH_041050 cysG_2; (GenBank) Siroheme synthase\tK24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]" }, { "name":"SPSPH_013680 hypothetical protein\tK22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]" }, { "name":"SPSPH_013690 hypothetical protein\tK22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]" }, { "name":"SPSPH_015380 mftC_1; (GenBank) Putative mycofactocin radical SAM maturase MftC\tK22226 ahbC; Fe-coproporphyrin III synthase" }, { "name":"SPSPH_015390 mftC_2; (GenBank) Putative mycofactocin radical SAM maturase MftC\tK22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]" }, { "name":"SPSPH_006370 cbiK_1; (GenBank) Sirohydrochlorin cobaltochelatase\tK02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]" }, { "name":"SPSPH_006660 cbiK_2; (GenBank) Sirohydrochlorin cobaltochelatase\tK02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]" }, { "name":"SPSPH_042100 cbiL; (GenBank) Cobalt-precorrin-2 C(20)-methyltransferase\tK03394 cobI-cbiL; precorrin-2\/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]" }, { "name":"SPSPH_016140 cbiH; (GenBank) putative cobalt-factor III C(17)-methyltransferase\tK05934 cobJ; precorrin-3B C17-methyltransferase \/ cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]" }, { "name":"SPSPH_016120 cbiF; (GenBank) Cobalt-precorrin-4 C(11)-methyltransferase\tK05936 cobM; precorrin-4\/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]" }, { "name":"SPSPH_016130 cbiG; (GenBank) Cobalt-precorrin-5A hydrolase\tK02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]" }, { "name":"SPSPH_016150 cbiJ; (GenBank) Cobalt-precorrin-6A reductase\tK05895 cobK-cbiJ; precorrin-6A\/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]" }, { "name":"SPSPH_016090 cbiD; (GenBank) Cobalt-precorrin-5B C(1)-methyltransferase\tK02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]" }, { "name":"SPSPH_016100 cbiET; (GenBank) Cobalamin biosynthesis bifunctional protein CbiET\tK03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]" }, { "name":"SPSPH_016160 cbiC; (GenBank) Cobalt-precorrin-8 methylmutase\tK06042 cobH-cbiC; precorrin-8X\/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]" }, { "name":"SPSPH_016170 cbiA; (GenBank) Cobyrinate a,c-diamide synthase\tK02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]" }, { "name":"SPSPH_006430 cobN_1; (GenBank) Aerobic cobaltochelatase subunit CobN\tK02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]" }, { "name":"SPSPH_006950 cobN_2; (GenBank) Aerobic cobaltochelatase subunit CobN\tK02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]" }, { "name":"SPSPH_022090 yvqK; (GenBank) Corrinoid adenosyltransferase\tK00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]" }, { "name":"SPSPH_007030 cobO; (GenBank) Corrinoid adenosyltransferase\tK19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]" }, { "name":"SPSPH_007130 btuR; (GenBank) Corrinoid adenosyltransferase\tK19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]" }, { "name":"SPSPH_016190 cobQ; (GenBank) Cobyric acid synthase\tK02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]" }, { "name":"SPSPH_016200 cobD_1; (GenBank) Cobalamin biosynthesis protein CobD\tK02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]" }, { "name":"SPSPH_016180 cobU; (GenBank) Bifunctional adenosylcobalamin biosynthesis protein CobU\tK02231 cobP; adenosylcobinamide kinase \/ adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]" }, { "name":"SPSPH_016210 cobS; (GenBank) Adenosylcobinamide-GDP ribazoletransferase\tK02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]" }, { "name":"SPSPH_010630 cobT_1; (GenBank) Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase\tK00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]" }, { "name":"SPSPH_038550 cobT_2; (GenBank) Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase\tK00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]" }, { "name":"SPSPH_038560 cobT_3; (GenBank) Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase\tK00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]" }, { "name":"SPSPH_016220 pduX; (GenBank) L-threonine kinase\tK16651 pduX; L-threonine kinase [EC:2.7.1.177]" }, { "name":"SPSPH_016230 cobD_2; (GenBank) Threonine-phosphate decarboxylase\tK04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]" }, { "name":"SPSPH_006590 hypothetical protein\tK03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]" }, { "name":"SPSPH_000660 hypothetical protein\tK03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]" }, { "name":"SPSPH_006580 bchI; (GenBank) Magnesium-chelatase 38 kDa subunit\tK03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]" }, { "name":"SPSPH_028560 bfr; (GenBank) Bacterioferritin\tK03594 bfr; bacterioferritin [EC:1.16.3.1]" }, { "name":"SPSPH_029740 hypothetical protein\tK03594 bfr; bacterioferritin [EC:1.16.3.1]" } ] }, { "name":"00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ssph00130]", "children":[ { "name":"SPSPH_013810 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase\tK03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]" }, { "name":"SPSPH_013800 ubiD; (GenBank) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase\tK03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]" }, { "name":"SPSPH_039270 shdB; (GenBank) putative UbiX-like flavin prenyltransferase\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]" }, { "name":"SPSPH_005790 mqnA; (GenBank) Chorismate dehydratase\tK11782 mqnA; chorismate dehydratase [EC:4.2.1.151]" }, { "name":"SPSPH_005800 mqnE; (GenBank) Aminodeoxyfutalosine synthase\tK18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]" }, { "name":"SPSPH_005780 mqnC_1; (GenBank) Cyclic dehypoxanthine futalosine synthase\tK11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]" }, { "name":"SPSPH_004220 fldA; (GenBank) Flavodoxin\tK03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]" } ] } ] }, { "name":"09109 Metabolism of terpenoids and polyketides", "children":[ { "name":"00900 Terpenoid backbone biosynthesis [PATH:ssph00900]", "children":[ { "name":"SPSPH_020910 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase\tK01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]" }, { "name":"SPSPH_017650 dxr; (GenBank) 1-deoxy-D-xylulose 5-phosphate reductoisomerase\tK00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]" }, { "name":"SPSPH_004170 ispDF; (GenBank) Bifunctional enzyme IspD\/IspF\tK12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase \/ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]" }, { "name":"SPSPH_001930 ispE; (GenBank) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase\tK00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]" }, { "name":"SPSPH_017670 ispG; (GenBank) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)\tK03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]" }, { "name":"SPSPH_018940 ispH; (GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase\tK02945 RP-S1; small subunit ribosomal protein S1" }, { "name":"SPSPH_001550 thlA_1; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_007500 thlA_2; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_041940 thlA_3; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_039270 shdB; (GenBank) putative UbiX-like flavin prenyltransferase\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]" }, { "name":"SPSPH_018950 fni_1; (GenBank) Isopentenyl-diphosphate delta-isomerase\tK01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]" }, { "name":"SPSPH_020890 Farnesyl diphosphate synthase\tK13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]" }, { "name":"SPSPH_017630 uppS; (GenBank) Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific)\tK00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]" } ] }, { "name":"00902 Monoterpenoid biosynthesis" }, { "name":"00909 Sesquiterpenoid and triterpenoid biosynthesis" }, { "name":"00904 Diterpenoid biosynthesis" }, { "name":"00906 Carotenoid biosynthesis" }, { "name":"00905 Brassinosteroid biosynthesis" }, { "name":"00981 Insect hormone biosynthesis" }, { "name":"00908 Zeatin biosynthesis" }, { "name":"00903 Limonene degradation" }, { "name":"00907 Pinene, camphor and geraniol degradation", "children":[ { "name":"SPSPH_032150 yngG; (GenBank) Hydroxymethylglutaryl-CoA lyase YngG\tK01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]" } ] }, { "name":"01052 Type I polyketide structures" }, { "name":"00522 Biosynthesis of 12-, 14- and 16-membered macrolides" }, { "name":"01051 Biosynthesis of ansamycins", "children":[ { "name":"SPSPH_030740 aptB; (GenBank) Apulose-4-phosphate transketolase subunit B\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" }, { "name":"SPSPH_030750 aptA; (GenBank) Apulose-4-phosphate transketolase subunit A\tK00615 E2.2.1.1; transketolase [EC:2.2.1.1]" } ] }, { "name":"01059 Biosynthesis of enediyne antibiotics" }, { "name":"01056 Biosynthesis of type II polyketide backbone" }, { "name":"01057 Biosynthesis of type II polyketide products" }, { "name":"00253 Tetracycline biosynthesis" }, { "name":"00523 Polyketide sugar unit biosynthesis [PATH:ssph00523]", "children":[ { "name":"SPSPH_041160 rmlA; (GenBank) Glucose-1-phosphate thymidylyltransferase\tK00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]" }, { "name":"SPSPH_041170 rffG; (GenBank) dTDP-glucose 4,6-dehydratase 2\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"SPSPH_041150 rmlC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]" }, { "name":"SPSPH_041140 rmlD; (GenBank) dTDP-4-dehydrorhamnose reductase\tK00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]" } ] }, { "name":"01054 Nonribosomal peptide structures [PATH:ssph01054]", "children":[ { "name":"SPSPH_011040 Aspartate racemase\tK01779 racD; aspartate racemase [EC:5.1.1.13]" } ] }, { "name":"01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:ssph01053]", "children":[ { "name":"SPSPH_007900 dltA_1; (GenBank) D-alanine--D-alanyl carrier protein ligase\tK12239 pchE; L-cysteine---[L-cysteinyl-carrier protein] ligase PchE [EC:6.2.1.69]" }, { "name":"SPSPH_007940 dltA_2; (GenBank) D-alanine--D-alanyl carrier protein ligase\tK12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69]" } ] }, { "name":"01055 Biosynthesis of vancomycin group antibiotics [PATH:ssph01055]", "children":[ { "name":"SPSPH_030580 lldD; (GenBank) L-lactate dehydrogenase\tK16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]" }, { "name":"SPSPH_041170 rffG; (GenBank) dTDP-glucose 4,6-dehydratase 2\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" } ] } ] }, { "name":"09110 Biosynthesis of other secondary metabolites", "children":[ { "name":"00940 Phenylpropanoid biosynthesis" }, { "name":"00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis" }, { "name":"00941 Flavonoid biosynthesis" }, { "name":"00944 Flavone and flavonol biosynthesis" }, { "name":"00942 Anthocyanin biosynthesis" }, { "name":"00943 Isoflavonoid biosynthesis" }, { "name":"00946 Degradation of flavonoids" }, { "name":"00901 Indole alkaloid biosynthesis" }, { "name":"00403 Indole diterpene alkaloid biosynthesis" }, { "name":"00950 Isoquinoline alkaloid biosynthesis" }, { "name":"00960 Tropane, piperidine and pyridine alkaloid biosynthesis" }, { "name":"00996 Biosynthesis of various alkaloids" }, { "name":"00232 Caffeine metabolism" }, { "name":"00965 Betalain biosynthesis" }, { "name":"00966 Glucosinolate biosynthesis" }, { "name":"00402 Benzoxazinoid biosynthesis" }, { "name":"00311 Penicillin and cephalosporin biosynthesis" }, { "name":"00332 Carbapenem biosynthesis [PATH:ssph00332]", "children":[ { "name":"SPSPH_014940 proB_1; (GenBank) Glutamate 5-kinase\tK00931 proB; glutamate 5-kinase [EC:2.7.2.11]" }, { "name":"SPSPH_034640 proB_2; (GenBank) Glutamate 5-kinase 1\tK00931 proB; glutamate 5-kinase [EC:2.7.2.11]" }, { "name":"SPSPH_014960 proA; (GenBank) Gamma-glutamyl phosphate reductase\tK00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]" } ] }, { "name":"00261 Monobactam biosynthesis [PATH:ssph00261]", "children":[ { "name":"SPSPH_030580 lldD; (GenBank) L-lactate dehydrogenase\tK16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]" }, { "name":"SPSPH_008470 cysN; (GenBank) Sulfate adenylyltransferase subunit 1\tK00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]" }, { "name":"SPSPH_008460 cysD; (GenBank) Sulfate adenylyltransferase subunit 2\tK00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]" }, { "name":"SPSPH_017920 lysC_1; (GenBank) Aspartokinase\tK00928 lysC; aspartate kinase [EC:2.7.2.4]" }, { "name":"SPSPH_024070 lysC_2; (GenBank) Aspartokinase\tK00928 lysC; aspartate kinase [EC:2.7.2.4]" }, { "name":"SPSPH_017910 asd; (GenBank) Aspartate-semialdehyde dehydrogenase\tK00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]" }, { "name":"SPSPH_017930 dapA_1; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"SPSPH_031010 dapA_2; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"SPSPH_039260 dapA_3; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase\tK01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]" }, { "name":"SPSPH_017900 dapB_1; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase\tK00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]" }, { "name":"SPSPH_028920 dapB_2; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase\tK00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]" } ] }, { "name":"00331 Clavulanic acid biosynthesis" }, { "name":"00521 Streptomycin biosynthesis [PATH:ssph00521]", "children":[ { "name":"SPSPH_028280 hypothetical protein\tK00844 HK; hexokinase [EC:2.7.1.1]" }, { "name":"SPSPH_040790 algC_2; (GenBank) Phosphomannomutase\/phosphoglucomutase\tK15778 pmm-pgm; phosphomannomutase \/ phosphoglucomutase [EC:5.4.2.8 5.4.2.2]" }, { "name":"SPSPH_041160 rmlA; (GenBank) Glucose-1-phosphate thymidylyltransferase\tK00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]" }, { "name":"SPSPH_041170 rffG; (GenBank) dTDP-glucose 4,6-dehydratase 2\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" }, { "name":"SPSPH_041150 rmlC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase\tK01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]" }, { "name":"SPSPH_041140 rmlD; (GenBank) dTDP-4-dehydrorhamnose reductase\tK00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]" } ] }, { "name":"00524 Neomycin, kanamycin and gentamicin biosynthesis", "children":[ { "name":"SPSPH_028280 hypothetical protein\tK00844 HK; hexokinase [EC:2.7.1.1]" } ] }, { "name":"00525 Acarbose and validamycin biosynthesis [PATH:ssph00525]", "children":[ { "name":"SPSPH_041160 rmlA; (GenBank) Glucose-1-phosphate thymidylyltransferase\tK00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]" }, { "name":"SPSPH_041170 rffG; (GenBank) dTDP-glucose 4,6-dehydratase 2\tK01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]" } ] }, { "name":"00401 Novobiocin biosynthesis [PATH:ssph00401]", "children":[ { "name":"SPSPH_023130 tyrC; (GenBank) Cyclohexadienyl dehydrogenase\tK04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]" }, { "name":"SPSPH_002080 Aspartate\/prephenate aminotransferase\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SPSPH_027470 hisC_2; (GenBank) Histidinol-phosphate aminotransferase\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" } ] }, { "name":"00404 Staurosporine biosynthesis" }, { "name":"00405 Phenazine biosynthesis", "children":[ { "name":"SPSPH_022830 trpE; (GenBank) Anthranilate synthase component 1\tK01657 trpE; anthranilate synthase component I [EC:4.1.3.27]" }, { "name":"SPSPH_022820 pabA_2; (GenBank) Aminodeoxychorismate synthase component 2\tK01658 trpG; anthranilate synthase component II [EC:4.1.3.27]" } ] }, { "name":"00333 Prodigiosin biosynthesis", "children":[ { "name":"SPSPH_016770 fabD; (GenBank) Malonyl CoA-acyl carrier protein transacylase\tK00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]" }, { "name":"SPSPH_001590 fabG_1; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase FabG\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SPSPH_005640 fabG2; (GenBank) putative oxidoreductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SPSPH_016780 fabG_2; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" } ] }, { "name":"00254 Aflatoxin biosynthesis" }, { "name":"00975 Biosynthesis of various siderophores", "children":[ { "name":"SPSPH_005990 orr; (GenBank) Ornithine racemase\tK21898 orr; ornithine racemase [EC:5.1.1.12]" } ] }, { "name":"00998 Biosynthesis of various antibiotics", "children":[ { "name":"SPSPH_016790 acpP_1; (GenBank) Acyl carrier protein\tK02078 acpP; acyl carrier protein" }, { "name":"SPSPH_045720 acpP_2; (GenBank) Acyl carrier protein\tK02078 acpP; acyl carrier protein" } ] }, { "name":"00999 Biosynthesis of various plant secondary metabolites [PATH:ssph00999]", "children":[ { "name":"SPSPH_021740 metK; (GenBank) S-adenosylmethionine synthase\tK00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]" }, { "name":"SPSPH_015690 aroE; (GenBank) Shikimate dehydrogenase (NADP(+))\tK00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]" } ] }, { "name":"00997 Biosynthesis of various other secondary metabolites" } ] }, { "name":"09111 Xenobiotics biodegradation and metabolism", "children":[ { "name":"00362 Benzoate degradation [PATH:ssph00362]", "children":[ { "name":"SPSPH_044540 mhpE; (GenBank) 4-hydroxy-2-oxovalerate aldolase\tK18365 bphI; 4-hydroxy-2-oxovalerate\/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]" }, { "name":"SPSPH_044550 bphJ; (GenBank) Acetaldehyde dehydrogenase 4\tK18366 bphJ; acetaldehyde\/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]" }, { "name":"SPSPH_021440 ywhB; (GenBank) 2-hydroxymuconate tautomerase\tK01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]" }, { "name":"SPSPH_000580 gcdB_1; (GenBank) Glutaconyl-CoA decarboxylase subunit beta\tK20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]" }, { "name":"SPSPH_014570 gcdB_2; (GenBank) Glutaconyl-CoA decarboxylase subunit beta\tK20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]" }, { "name":"SPSPH_014560 gcdC; (GenBank) Glutaconyl-CoA decarboxylase subunit gamma\tK23351 gcdC; glutaconyl-CoA\/methylmalonyl-CoA decarboxylase subunit gamma" }, { "name":"SPSPH_001500 hbd_1; (GenBank) 3-hydroxybutyryl-CoA dehydrogenase\tK00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]" }, { "name":"SPSPH_007510 hbd_2; (GenBank) 3-hydroxybutyryl-CoA dehydrogenase\tK00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]" }, { "name":"SPSPH_041810 hbd_3; (GenBank) 3-hydroxybutyryl-CoA dehydrogenase\tK00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]" }, { "name":"SPSPH_041950 hbd_4; (GenBank) 3-hydroxybutyryl-CoA dehydrogenase\tK00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]" }, { "name":"SPSPH_001550 thlA_1; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_007500 thlA_2; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_041940 thlA_3; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" } ] }, { "name":"00627 Aminobenzoate degradation", "children":[ { "name":"SPSPH_039270 shdB; (GenBank) putative UbiX-like flavin prenyltransferase\tK03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]" } ] }, { "name":"00364 Fluorobenzoate degradation" }, { "name":"00625 Chloroalkane and chloroalkene degradation [PATH:ssph00625]", "children":[ { "name":"SPSPH_010620 adhB_1; (GenBank) Alcohol dehydrogenase 2\tK13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]" }, { "name":"SPSPH_023220 adhB_2; (GenBank) Alcohol dehydrogenase 2\tK13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]" }, { "name":"SPSPH_009580 nifK_1; (GenBank) Nitrogenase molybdenum-iron protein beta chain\tK02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]" }, { "name":"SPSPH_009960 nifK_2; (GenBank) Nitrogenase molybdenum-iron protein beta chain\tK02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]" }, { "name":"SPSPH_041410 nifK_3; (GenBank) Nitrogenase molybdenum-iron protein beta chain\tK02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]" }, { "name":"SPSPH_041430 nifK_4; (GenBank) Nitrogenase molybdenum-iron protein beta chain\tK02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]" }, { "name":"SPSPH_006990 nifH1_1; (GenBank) Nitrogenase iron protein 1\tK02588 nifH; nitrogenase iron protein NifH" }, { "name":"SPSPH_010080 nifH1_2; (GenBank) Nitrogenase iron protein 1\tK02588 nifH; nitrogenase iron protein NifH" }, { "name":"SPSPH_028120 nifH1_3; (GenBank) Nitrogenase iron protein 1\tK02588 nifH; nitrogenase iron protein NifH" }, { "name":"SPSPH_038840 nifH1_4; (GenBank) Nitrogenase iron protein 1\tK02588 nifH; nitrogenase iron protein NifH" }, { "name":"SPSPH_041470 nifH1_5; (GenBank) Nitrogenase iron protein 1\tK02588 nifH; nitrogenase iron protein NifH" }, { "name":"SPSPH_009570 bchB_2; (GenBank) Light-independent protochlorophyllide reductase subunit B\tK02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]" }, { "name":"SPSPH_009970 nifD_1; (GenBank) Nitrogenase molybdenum-iron protein alpha chain\tK02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]" }, { "name":"SPSPH_041440 nifD_3; (GenBank) Nitrogenase molybdenum-iron protein alpha chain\tK02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]" } ] }, { "name":"00361 Chlorocyclohexane and chlorobenzene degradation" }, { "name":"00623 Toluene degradation" }, { "name":"00622 Xylene degradation [PATH:ssph00622]", "children":[ { "name":"SPSPH_021440 ywhB; (GenBank) 2-hydroxymuconate tautomerase\tK01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]" }, { "name":"SPSPH_044540 mhpE; (GenBank) 4-hydroxy-2-oxovalerate aldolase\tK18365 bphI; 4-hydroxy-2-oxovalerate\/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]" }, { "name":"SPSPH_044550 bphJ; (GenBank) Acetaldehyde dehydrogenase 4\tK18366 bphJ; acetaldehyde\/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]" } ] }, { "name":"00633 Nitrotoluene degradation [PATH:ssph00633]", "children":[ { "name":"SPSPH_015430 hoxG; (GenBank) Uptake hydrogenase large subunit\tK06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]" }, { "name":"SPSPH_040800 Periplasmic [NiFeSe] hydrogenase large subunit\tK06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]" }, { "name":"SPSPH_015420 hoxK; (GenBank) Uptake hydrogenase small subunit\tK06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]" }, { "name":"SPSPH_040810 hypothetical protein\tK06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]" }, { "name":"SPSPH_008210 cooS1_1; (GenBank) Carbon monoxide dehydrogenase 1\tK00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]" }, { "name":"SPSPH_010530 cooS1_2; (GenBank) Carbon monoxide dehydrogenase 1\tK00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]" }, { "name":"SPSPH_013870 Carbon monoxide dehydrogenase\/acetyl-CoA synthase subunit beta\tK00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]" }, { "name":"SPSPH_012450 Oxalate oxidoreductase subunit delta\tK00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]" } ] }, { "name":"00642 Ethylbenzene degradation" }, { "name":"00643 Styrene degradation", "children":[ { "name":"SPSPH_001560 carA_1; (GenBank) Caffeate CoA-transferase\tK01026 pct; propionate CoA-transferase [EC:2.8.3.1]" }, { "name":"SPSPH_027140 carA_3; (GenBank) Caffeate CoA-transferase\tK01026 pct; propionate CoA-transferase [EC:2.8.3.1]" }, { "name":"SPSPH_041930 ydiF; (GenBank) Acetate CoA-transferase YdiF\tK01026 pct; propionate CoA-transferase [EC:2.8.3.1]" } ] }, { "name":"00791 Atrazine degradation" }, { "name":"00930 Caprolactam degradation" }, { "name":"00363 Bisphenol degradation" }, { "name":"00621 Dioxin degradation [PATH:ssph00621]", "children":[ { "name":"SPSPH_021440 ywhB; (GenBank) 2-hydroxymuconate tautomerase\tK01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]" }, { "name":"SPSPH_044540 mhpE; (GenBank) 4-hydroxy-2-oxovalerate aldolase\tK18365 bphI; 4-hydroxy-2-oxovalerate\/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]" }, { "name":"SPSPH_044550 bphJ; (GenBank) Acetaldehyde dehydrogenase 4\tK18366 bphJ; acetaldehyde\/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]" } ] }, { "name":"00626 Naphthalene degradation [PATH:ssph00626]", "children":[ { "name":"SPSPH_010620 adhB_1; (GenBank) Alcohol dehydrogenase 2\tK13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]" }, { "name":"SPSPH_023220 adhB_2; (GenBank) Alcohol dehydrogenase 2\tK13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]" } ] }, { "name":"00624 Polycyclic aromatic hydrocarbon degradation" }, { "name":"00365 Furfural degradation" }, { "name":"00984 Steroid degradation [PATH:ssph00984]", "children":[ { "name":"SPSPH_044540 mhpE; (GenBank) 4-hydroxy-2-oxovalerate aldolase\tK18365 bphI; 4-hydroxy-2-oxovalerate\/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]" }, { "name":"SPSPH_044550 bphJ; (GenBank) Acetaldehyde dehydrogenase 4\tK18366 bphJ; acetaldehyde\/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]" } ] }, { "name":"00980 Metabolism of xenobiotics by cytochrome P450" }, { "name":"00982 Drug metabolism - cytochrome P450" }, { "name":"00983 Drug metabolism - other enzymes" } ] }, { "name":"09112 Not included in regular maps", "children":[ { "name":"09113 Global maps only" } ] } ] }, { "name":"09120 Genetic Information Processing", "children":[ { "name":"09121 Transcription", "children":[ { "name":"03020 RNA polymerase [PATH:ssph03020]", "children":[ { "name":"SPSPH_004570 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta\tK03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]" }, { "name":"SPSPH_004580 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta'\tK03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]" }, { "name":"SPSPH_004930 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha\tK03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]" }, { "name":"SPSPH_021760 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega\tK03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]" } ] }, { "name":"03022 Basal transcription factors" }, { "name":"03040 Spliceosome" } ] }, { "name":"09122 Translation", "children":[ { "name":"03010 Ribosome [PATH:ssph03010]", "children":[ { "name":"SPSPH_000210 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_000270 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_003950 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_007190 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_012240 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_020150 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_024490 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_024540 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_028430 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_028550 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_037630 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_041310 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_000230 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_000300 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_004000 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_007220 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_012270 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_024450 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_024510 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_028410 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_028540 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_037610 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_041300 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_000220 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_000280 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_000310 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_003980 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_004010 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_007210 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_012250 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_024460 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_028420 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_037620 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_018940 ispH; (GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase\tK02945 RP-S1; small subunit ribosomal protein S1" }, { "name":"SPSPH_017570 rpsB; (GenBank) 30S ribosomal protein S2\tK02967 RP-S2; small subunit ribosomal protein S2" }, { "name":"SPSPH_004710 rpsC; (GenBank) 30S ribosomal protein S3\tK02982 RP-S3; small subunit ribosomal protein S3" }, { "name":"SPSPH_004920 rpsD; (GenBank) 30S ribosomal protein S4\tK02986 RP-S4; small subunit ribosomal protein S4" }, { "name":"SPSPH_004820 rpsE; (GenBank) 30S ribosomal protein S5\tK02988 RP-S5; small subunit ribosomal protein S5" }, { "name":"SPSPH_046210 rpsF; (GenBank) 30S ribosomal protein S6\tK02990 RP-S6; small subunit ribosomal protein S6" }, { "name":"SPSPH_004610 rpsG; (GenBank) 30S ribosomal protein S7\tK02992 RP-S7; small subunit ribosomal protein S7" }, { "name":"SPSPH_004790 rpsH; (GenBank) 30S ribosomal protein S8\tK02994 RP-S8; small subunit ribosomal protein S8" }, { "name":"SPSPH_005000 rpsI; (GenBank) 30S ribosomal protein S9\tK02996 RP-S9; small subunit ribosomal protein S9" }, { "name":"SPSPH_004640 rpsJ; (GenBank) 30S ribosomal protein S10\tK02946 RP-S10; small subunit ribosomal protein S10" }, { "name":"SPSPH_004910 rpsK; (GenBank) 30S ribosomal protein S11\tK02948 RP-S11; small subunit ribosomal protein S11" }, { "name":"SPSPH_004600 rpsL; (GenBank) 30S ribosomal protein S12\tK02950 RP-S12; small subunit ribosomal protein S12" }, { "name":"SPSPH_004900 rpsM; (GenBank) 30S ribosomal protein S13\tK02952 RP-S13; small subunit ribosomal protein S13" }, { "name":"SPSPH_004780 rpsN1; (GenBank) 30S ribosomal protein S14\tK02954 RP-S14; small subunit ribosomal protein S14" }, { "name":"SPSPH_017800 rpsO; (GenBank) 30S ribosomal protein S15\tK02956 RP-S15; small subunit ribosomal protein S15" }, { "name":"SPSPH_016890 rpsP; (GenBank) 30S ribosomal protein S16\tK02959 RP-S16; small subunit ribosomal protein S16" }, { "name":"SPSPH_004740 rpsQ; (GenBank) 30S ribosomal protein S17\tK02961 RP-S17; small subunit ribosomal protein S17" }, { "name":"SPSPH_046190 rpsR; (GenBank) 30S ribosomal protein S18\tK02963 RP-S18; small subunit ribosomal protein S18" }, { "name":"SPSPH_004690 rpsS; (GenBank) 30S ribosomal protein S19\tK02965 RP-S19; small subunit ribosomal protein S19" }, { "name":"SPSPH_019240 rpsT; (GenBank) 30S ribosomal protein S20\tK02968 RP-S20; small subunit ribosomal protein S20" }, { "name":"SPSPH_019390 rpsU; (GenBank) 30S ribosomal protein S21\tK02970 RP-S21; small subunit ribosomal protein S21" }, { "name":"SPSPH_004540 rplA; (GenBank) 50S ribosomal protein L1\tK02863 RP-L1; large subunit ribosomal protein L1" }, { "name":"SPSPH_004680 rplB; (GenBank) 50S ribosomal protein L2\tK02886 RP-L2; large subunit ribosomal protein L2" }, { "name":"SPSPH_004650 rplC; (GenBank) 50S ribosomal protein L3\tK02906 RP-L3; large subunit ribosomal protein L3" }, { "name":"SPSPH_004660 rplD; (GenBank) 50S ribosomal protein L4\tK02926 RP-L4; large subunit ribosomal protein L4" }, { "name":"SPSPH_004770 rplE; (GenBank) 50S ribosomal protein L5\tK02931 RP-L5; large subunit ribosomal protein L5" }, { "name":"SPSPH_004800 rplF; (GenBank) 50S ribosomal protein L6\tK02933 RP-L6; large subunit ribosomal protein L6" }, { "name":"SPSPH_004590 rplGB; (GenBank) Ribosome-associated protein L7Ae-like protein\tK07590 RP-L7A; large subunit ribosomal protein L7A" }, { "name":"SPSPH_046150 rplI; (GenBank) 50S ribosomal protein L9\tK02939 RP-L9; large subunit ribosomal protein L9" }, { "name":"SPSPH_004550 rplJ; (GenBank) 50S ribosomal protein L10\tK02864 RP-L10; large subunit ribosomal protein L10" }, { "name":"SPSPH_004530 rplK; (GenBank) 50S ribosomal protein L11\tK02867 RP-L11; large subunit ribosomal protein L11" }, { "name":"SPSPH_004560 rplL; (GenBank) 50S ribosomal protein L7\/L12\tK02935 RP-L7; large subunit ribosomal protein L7\/L12" }, { "name":"SPSPH_004990 rplM; (GenBank) 50S ribosomal protein L13\tK02871 RP-L13; large subunit ribosomal protein L13" }, { "name":"SPSPH_004750 rplN; (GenBank) 50S ribosomal protein L14\tK02874 RP-L14; large subunit ribosomal protein L14" }, { "name":"SPSPH_004840 rplO; (GenBank) 50S ribosomal protein L15\tK02876 RP-L15; large subunit ribosomal protein L15" }, { "name":"SPSPH_004720 rplP; (GenBank) 50S ribosomal protein L16\tK02878 RP-L16; large subunit ribosomal protein L16" }, { "name":"SPSPH_004940 rplQ; (GenBank) 50S ribosomal protein L17\tK02879 RP-L17; large subunit ribosomal protein L17" }, { "name":"SPSPH_004810 rplR; (GenBank) 50S ribosomal protein L18\tK02881 RP-L18; large subunit ribosomal protein L18" }, { "name":"SPSPH_016950 rplS; (GenBank) 50S ribosomal protein L19\tK02884 RP-L19; large subunit ribosomal protein L19" }, { "name":"SPSPH_019940 rplT; (GenBank) 50S ribosomal protein L20\tK02887 RP-L20; large subunit ribosomal protein L20" }, { "name":"SPSPH_014880 rplU; (GenBank) 50S ribosomal protein L21\tK02888 RP-L21; large subunit ribosomal protein L21" }, { "name":"SPSPH_004700 rplV; (GenBank) 50S ribosomal protein L22\tK02890 RP-L22; large subunit ribosomal protein L22" }, { "name":"SPSPH_004670 rplW; (GenBank) 50S ribosomal protein L23\tK02892 RP-L23; large subunit ribosomal protein L23" }, { "name":"SPSPH_004760 rplX; (GenBank) 50S ribosomal protein L24\tK02895 RP-L24; large subunit ribosomal protein L24" }, { "name":"SPSPH_014900 rpmA; (GenBank) 50S ribosomal protein L27\tK02899 RP-L27; large subunit ribosomal protein L27" }, { "name":"SPSPH_021510 rpmB; (GenBank) 50S ribosomal protein L28\tK02902 RP-L28; large subunit ribosomal protein L28" }, { "name":"SPSPH_004730 rpmC; (GenBank) 50S ribosomal protein L29\tK02904 RP-L29; large subunit ribosomal protein L29" }, { "name":"SPSPH_004830 rpmD; (GenBank) 50S ribosomal protein L30\tK02907 RP-L30; large subunit ribosomal protein L30" }, { "name":"SPSPH_033970 rpmE; (GenBank) 50S ribosomal protein L31\tK02909 RP-L31; large subunit ribosomal protein L31" }, { "name":"SPSPH_016720 rpmF; (GenBank) 50S ribosomal protein L32\tK02911 RP-L32; large subunit ribosomal protein L32" }, { "name":"SPSPH_004490 rpmGA; (GenBank) 50S ribosomal protein L33 1\tK02913 RP-L33; large subunit ribosomal protein L33" }, { "name":"SPSPH_019930 rpmI; (GenBank) 50S ribosomal protein L35\tK02916 RP-L35; large subunit ribosomal protein L35" } ] }, { "name":"00970 Aminoacyl-tRNA biosynthesis [PATH:ssph00970]", "children":[ { "name":"SPSPH_003970 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"SPSPH_007200 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"SPSPH_015090 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"SPSPH_020160 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"SPSPH_024470 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"SPSPH_024520 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"SPSPH_024260 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SPSPH_028270 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SPSPH_028490 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SPSPH_031500 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SPSPH_032070 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SPSPH_043580 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SPSPH_007230 tRNA-Asn\tK14220 tRNA-Asn; tRNA Asn" }, { "name":"SPSPH_019650 tRNA-Asn\tK14220 tRNA-Asn; tRNA Asn" }, { "name":"SPSPH_028400 tRNA-Asn\tK14220 tRNA-Asn; tRNA Asn" }, { "name":"SPSPH_028530 tRNA-Asn\tK14220 tRNA-Asn; tRNA Asn" }, { "name":"SPSPH_032240 tRNA-Asn\tK14220 tRNA-Asn; tRNA Asn" }, { "name":"SPSPH_012320 tRNA-Asp\tK14221 tRNA-Asp; tRNA Asp" }, { "name":"SPSPH_022270 tRNA-Asp\tK14221 tRNA-Asp; tRNA Asp" }, { "name":"SPSPH_022350 tRNA-Asp\tK14221 tRNA-Asp; tRNA Asp" }, { "name":"SPSPH_024270 tRNA-Asp\tK14221 tRNA-Asp; tRNA Asp" }, { "name":"SPSPH_028500 tRNA-Asp\tK14221 tRNA-Asp; tRNA Asp" }, { "name":"SPSPH_045920 tRNA-Asp\tK14221 tRNA-Asp; tRNA Asp" }, { "name":"SPSPH_012350 tRNA-Cys\tK14222 tRNA-Cys; tRNA Cys" }, { "name":"SPSPH_022240 tRNA-Cys\tK14222 tRNA-Cys; tRNA Cys" }, { "name":"SPSPH_008260 tRNA-Gln\tK14223 tRNA-Gln; tRNA Gln" }, { "name":"SPSPH_012280 tRNA-Gln\tK14223 tRNA-Gln; tRNA Gln" }, { "name":"SPSPH_013550 tRNA-Gln\tK14223 tRNA-Gln; tRNA Gln" }, { "name":"SPSPH_012300 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"SPSPH_019670 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"SPSPH_024290 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"SPSPH_028510 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"SPSPH_032230 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"SPSPH_045980 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"SPSPH_012340 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SPSPH_013610 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SPSPH_022250 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SPSPH_022340 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SPSPH_024190 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SPSPH_031510 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SPSPH_037640 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SPSPH_045880 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SPSPH_013540 tRNA-His\tK14226 tRNA-His; tRNA His" }, { "name":"SPSPH_028380 tRNA-His\tK14226 tRNA-His; tRNA His" }, { "name":"SPSPH_003960 tRNA-Ile\tK14227 tRNA-Ile; tRNA Ile" }, { "name":"SPSPH_024480 tRNA-Ile\tK14227 tRNA-Ile; tRNA Ile" }, { "name":"SPSPH_024530 tRNA-Ile\tK14227 tRNA-Ile; tRNA Ile" }, { "name":"SPSPH_012360 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SPSPH_013570 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SPSPH_022230 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SPSPH_022440 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SPSPH_022450 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SPSPH_022460 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SPSPH_022570 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SPSPH_028440 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SPSPH_028450 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SPSPH_037670 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SPSPH_008270 tRNA-Lys\tK14229 tRNA-Lys; tRNA Lys" }, { "name":"SPSPH_012290 tRNA-Lys\tK14229 tRNA-Lys; tRNA Lys" }, { "name":"SPSPH_013560 tRNA-Lys\tK14229 tRNA-Lys; tRNA Lys" }, { "name":"SPSPH_024440 tRNA-Lys\tK14229 tRNA-Lys; tRNA Lys" }, { "name":"SPSPH_045990 tRNA-Lys\tK14229 tRNA-Lys; tRNA Lys" }, { "name":"SPSPH_004450 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_004470 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_019110 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_019660 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_019850 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_019870 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_024200 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_024220 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_028390 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_028460 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_044300 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_012330 tRNA-Phe\tK14231 tRNA-Phe; tRNA Phe" }, { "name":"SPSPH_022260 tRNA-Phe\tK14231 tRNA-Phe; tRNA Phe" }, { "name":"SPSPH_024250 tRNA-Phe\tK14231 tRNA-Phe; tRNA Phe" }, { "name":"SPSPH_045910 tRNA-Phe\tK14231 tRNA-Phe; tRNA Phe" }, { "name":"SPSPH_016620 tRNA-Pro\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"SPSPH_019080 tRNA-Pro\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"SPSPH_024180 tRNA-Pro\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"SPSPH_031520 tRNA-Pro\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"SPSPH_037660 tRNA-Pro\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"SPSPH_000910 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"SPSPH_000920 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"SPSPH_028520 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"SPSPH_042770 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"SPSPH_043350 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"SPSPH_004430 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"SPSPH_004460 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"SPSPH_019860 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"SPSPH_024210 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"SPSPH_024240 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"SPSPH_028480 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"SPSPH_044510 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"SPSPH_004500 tRNA-Trp\tK14235 tRNA-Trp; tRNA Trp" }, { "name":"SPSPH_022330 tRNA-Trp\tK14235 tRNA-Trp; tRNA Trp" }, { "name":"SPSPH_004440 tRNA-Tyr\tK14236 tRNA-Tyr; tRNA Tyr" }, { "name":"SPSPH_024230 tRNA-Tyr\tK14236 tRNA-Tyr; tRNA Tyr" }, { "name":"SPSPH_028470 tRNA-Tyr\tK14236 tRNA-Tyr; tRNA Tyr" }, { "name":"SPSPH_012310 tRNA-Val\tK14237 tRNA-Val; tRNA Val" }, { "name":"SPSPH_019680 tRNA-Val\tK14237 tRNA-Val; tRNA Val" }, { "name":"SPSPH_019820 tRNA-Val\tK14237 tRNA-Val; tRNA Val" }, { "name":"SPSPH_024280 tRNA-Val\tK14237 tRNA-Val; tRNA Val" }, { "name":"SPSPH_032220 tRNA-Val\tK14237 tRNA-Val; tRNA Val" }, { "name":"SPSPH_037650 tRNA-Val\tK14237 tRNA-Val; tRNA Val" }, { "name":"SPSPH_045970 tRNA-Val\tK14237 tRNA-Val; tRNA Val" }, { "name":"SPSPH_009040 tRNA-Sec\tK14238 tRNA-Sec; tRNA Sec" }, { "name":"SPSPH_042020 tRNA-Sec\tK14238 tRNA-Sec; tRNA Sec" }, { "name":"SPSPH_029860 tRNA-Pyl\tK14239 tRNA-Pyl; tRNA Pyl" }, { "name":"SPSPH_030010 tRNA-Pyl\tK14239 tRNA-Pyl; tRNA Pyl" }, { "name":"SPSPH_034290 gltX1; (GenBank) Glutamate--tRNA ligase 1\tK01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]" }, { "name":"SPSPH_004270 gltX; (GenBank) Glutamate--tRNA ligase\tK09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]" }, { "name":"SPSPH_026740 gatA; (GenBank) Glutamyl-tRNA(Gln) amidotransferase subunit A\tK02433 gatA; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]" }, { "name":"SPSPH_026730 gatB; (GenBank) Aspartyl\/glutamyl-tRNA(Asn\/Gln) amidotransferase subunit B\tK02434 gatB; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]" }, { "name":"SPSPH_026750 gatC; (GenBank) Aspartyl\/glutamyl-tRNA(Asn\/Gln) amidotransferase subunit C\tK02435 gatC; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]" }, { "name":"SPSPH_027590 glnS; (GenBank) Glutamine--tRNA ligase\tK01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]" }, { "name":"SPSPH_020590 alaS; (GenBank) Alanine--tRNA ligase\tK01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]" }, { "name":"SPSPH_020470 aspS; (GenBank) Aspartate--tRNA ligase\tK01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]" }, { "name":"SPSPH_024050 asnS; (GenBank) Asparagine--tRNA ligase\tK01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]" }, { "name":"SPSPH_019570 glyQ; (GenBank) Glycine--tRNA ligase alpha subunit\tK01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]" }, { "name":"SPSPH_019580 glyS; (GenBank) Glycine--tRNA ligase beta subunit\tK01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]" }, { "name":"SPSPH_019910 thrZ; (GenBank) Threonine--tRNA ligase 2\tK01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]" }, { "name":"SPSPH_042130 serS; (GenBank) Serine--tRNA ligase\tK01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]" }, { "name":"SPSPH_009150 selA_1; (GenBank) L-seryl-tRNA(Sec) selenium transferase\tK01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]" }, { "name":"SPSPH_046400 selA_2; (GenBank) L-seryl-tRNA(Sec) selenium transferase\tK01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]" }, { "name":"SPSPH_004290 cysS; (GenBank) Cysteine--tRNA ligase\tK01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]" }, { "name":"SPSPH_001730 metG; (GenBank) Methionine--tRNA ligase\tK01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]" }, { "name":"SPSPH_021690 fmt_1; (GenBank) Methionyl-tRNA formyltransferase\tK00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]" }, { "name":"SPSPH_032480 fmt_2; (GenBank) Methionyl-tRNA formyltransferase\tK00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]" }, { "name":"SPSPH_014250 valS; (GenBank) Valine--tRNA ligase\tK01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]" }, { "name":"SPSPH_015360 leuS; (GenBank) Leucine--tRNA ligase\tK01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]" }, { "name":"SPSPH_021920 ileS; (GenBank) Isoleucine--tRNA ligase\tK01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]" }, { "name":"SPSPH_003940 lysS; (GenBank) Lysine--tRNA ligase\tK04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]" }, { "name":"SPSPH_002600 argS; (GenBank) Arginine--tRNA ligase\tK01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]" }, { "name":"SPSPH_017680 proS; (GenBank) Proline--tRNA ligase\tK01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]" }, { "name":"SPSPH_020460 hisS; (GenBank) Histidine--tRNA ligase\tK01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]" }, { "name":"SPSPH_019990 pheS; (GenBank) Phenylalanine--tRNA ligase alpha subunit\tK01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]" }, { "name":"SPSPH_020000 pheT; (GenBank) Phenylalanine--tRNA ligase beta subunit\tK01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]" }, { "name":"SPSPH_020120 tyrS_1; (GenBank) Tyrosine--tRNA ligase\tK01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]" }, { "name":"SPSPH_025170 tyrS_2; (GenBank) Tyrosine--tRNA ligase\tK01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]" }, { "name":"SPSPH_018730 trpS; (GenBank) Tryptophan--tRNA ligase\tK01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]" } ] }, { "name":"03013 Nucleocytoplasmic transport" }, { "name":"03015 mRNA surveillance pathway" }, { "name":"03008 Ribosome biogenesis in eukaryotes", "children":[ { "name":"SPSPH_016820 rnc; (GenBank) Ribonuclease 3\tK03685 rnc; ribonuclease III [EC:3.1.26.3]" } ] } ] }, { "name":"09123 Folding, sorting and degradation", "children":[ { "name":"03060 Protein export [PATH:ssph03060]", "children":[ { "name":"SPSPH_004850 secY; (GenBank) Protein translocase subunit SecY\tK03076 secY; preprotein translocase subunit SecY" }, { "name":"SPSPH_004510 secE; (GenBank) Protein translocase subunit SecE\tK03073 secE; preprotein translocase subunit SecE" }, { "name":"SPSPH_030240 secG; (GenBank) putative protein-export membrane protein SecG\tK03075 secG; preprotein translocase subunit SecG" }, { "name":"SPSPH_020340 secDF; (GenBank) Protein translocase subunit SecDF\tK03072 secD; preprotein translocase subunit SecD" }, { "name":"SPSPH_020350 secF; (GenBank) Protein translocase subunit SecF\tK03074 secF; preprotein translocase subunit SecF" }, { "name":"SPSPH_020310 hypothetical protein\tK03210 yajC; preprotein translocase subunit YajC" }, { "name":"SPSPH_046640 yidC2; (GenBank) Membrane protein insertase YidC 2\tK03217 yidC; YidC\/Oxa1 family membrane protein insertase" }, { "name":"SPSPH_030810 secA; (GenBank) Protein translocase subunit SecA\tK03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]" }, { "name":"SPSPH_016880 ffh; (GenBank) Signal recognition particle protein\tK03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]" }, { "name":"SPSPH_016860 ftsY; (GenBank) Signal recognition particle receptor FtsY\tK03110 ftsY; fused signal recognition particle receptor" }, { "name":"SPSPH_025860 arsA; (GenBank) Arsenical pump-driving ATPase\tK01551 arsA; arsenite\/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]" }, { "name":"SPSPH_013780 tatA; (GenBank) Sec-independent protein translocase protein TatA\tK03116 tatA; sec-independent protein translocase protein TatA" }, { "name":"SPSPH_013790 tatC; (GenBank) Sec-independent protein translocase protein TatC\tK03118 tatC; sec-independent protein translocase protein TatC" }, { "name":"SPSPH_010520 sipS; (GenBank) Signal peptidase I S\tK03100 lepB; signal peptidase I [EC:3.4.21.89]" }, { "name":"SPSPH_016960 sipT; (GenBank) Signal peptidase I T\tK03100 lepB; signal peptidase I [EC:3.4.21.89]" }, { "name":"SPSPH_021870 lspA; (GenBank) Lipoprotein signal peptidase\tK03101 lspA; signal peptidase II [EC:3.4.23.36]" } ] }, { "name":"04141 Protein processing in endoplasmic reticulum [PATH:ssph04141]", "children":[ { "name":"SPSPH_012430 ftsH_4; (GenBank) ATP-dependent zinc metalloprotease FtsH\tK13525 VCP; transitional endoplasmic reticulum ATPase" }, { "name":"SPSPH_022220 htpG; (GenBank) Chaperone protein HtpG\tK04079 HSP90A; molecular chaperone HtpG" }, { "name":"SPSPH_042260 18 kDa heat shock protein\tK13993 HSP20; HSP20 family protein" } ] }, { "name":"04130 SNARE interactions in vesicular transport" }, { "name":"04120 Ubiquitin mediated proteolysis" }, { "name":"04122 Sulfur relay system [PATH:ssph04122]", "children":[ { "name":"SPSPH_020520 iscS; (GenBank) Cysteine desulfurase IscS\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]" }, { "name":"SPSPH_020540 mnmA; (GenBank) tRNA-specific 2-thiouridylase MnmA\tK00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]" }, { "name":"SPSPH_023240 moaA2; (GenBank) GTP 3',8-cyclase 2\tK03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]" }, { "name":"SPSPH_010030 hypothetical protein\tK21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]" }, { "name":"SPSPH_023210 moaC; (GenBank) Cyclic pyranopterin monophosphate synthase\tK03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]" }, { "name":"SPSPH_023190 mog; (GenBank) Molybdopterin adenylyltransferase\tK03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]" }, { "name":"SPSPH_029520 hypothetical protein\tK03154 thiS; sulfur carrier protein" }, { "name":"SPSPH_039420 thiS; (GenBank) Sulfur carrier protein ThiS\tK03154 thiS; sulfur carrier protein" } ] }, { "name":"03050 Proteasome" }, { "name":"03018 RNA degradation [PATH:ssph03018]", "children":[ { "name":"SPSPH_030260 eno; (GenBank) Enolase\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]" }, { "name":"SPSPH_017810 pnp_2; (GenBank) Polyribonucleotide nucleotidyltransferase\tK00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]" }, { "name":"SPSPH_030190 rnr; (GenBank) Ribonuclease R\tK12573 rnr; ribonuclease R [EC:3.1.13.1]" }, { "name":"SPSPH_018050 cshA_1; (GenBank) DEAD-box ATP-dependent RNA helicase CshA\tK05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]" }, { "name":"SPSPH_023610 cshE; (GenBank) DEAD-box ATP-dependent RNA helicase CshE\tK05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]" }, { "name":"SPSPH_035530 cshA_2; (GenBank) DEAD-box ATP-dependent RNA helicase CshA\tK05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]" }, { "name":"SPSPH_023340 recQ; (GenBank) ATP-dependent DNA helicase RecQ\tK03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]" }, { "name":"SPSPH_039520 srmB; (GenBank) ATP-dependent RNA helicase SrmB\tK03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]" }, { "name":"SPSPH_018080 rny; (GenBank) Ribonuclease Y\tK18682 rny; ribonucrease Y [EC:3.1.-.-]" }, { "name":"SPSPH_005650 rnjA_1; (GenBank) Ribonuclease J1\tK12574 rnj; ribonuclease J [EC:3.1.-.-]" }, { "name":"SPSPH_017940 rnjA_2; (GenBank) Ribonuclease J1\tK12574 rnj; ribonuclease J [EC:3.1.-.-]" }, { "name":"SPSPH_007580 pfkA; (GenBank) ATP-dependent 6-phosphofructokinase\tK00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]" }, { "name":"SPSPH_011000 dnaK2; (GenBank) Chaperone protein dnaK2\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SPSPH_019330 dnaK; (GenBank) Chaperone protein DnaK\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SPSPH_012170 groL_1; (GenBank) 60 kDa chaperonin\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SPSPH_042250 groL_3; (GenBank) 60 kDa chaperonin\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SPSPH_018220 hfq; (GenBank) RNA-binding protein Hfq\tK03666 hfq; host factor-I protein" }, { "name":"SPSPH_043650 ppk; (GenBank) Polyphosphate kinase\tK00937 ppk1; polyphosphate kinase [EC:2.7.4.1]" } ] } ] }, { "name":"09124 Replication and repair", "children":[ { "name":"03030 DNA replication [PATH:ssph03030]", "children":[ { "name":"SPSPH_037320 polC_2; (GenBank) DNA polymerase III PolC-type\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]" }, { "name":"SPSPH_022940 dnaE; (GenBank) DNA polymerase III subunit alpha\tK02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]" }, { "name":"SPSPH_017700 polC_1; (GenBank) DNA polymerase III PolC-type\tK03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]" }, { "name":"SPSPH_042760 ruvB_2; (GenBank) Holliday junction ATP-dependent DNA helicase RuvB\tK02343 dnaX; DNA polymerase III subunit gamma\/tau [EC:2.7.7.7]" }, { "name":"SPSPH_001680 hypothetical protein\tK02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]" }, { "name":"SPSPH_019230 yqeN; (GenBank) putative protein YqeN\tK02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]" }, { "name":"SPSPH_000020 dnaN; (GenBank) Beta sliding clamp\tK02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]" }, { "name":"SPSPH_018340 radA_2; (GenBank) DNA repair protein RadA\tK02314 dnaB; replicative DNA helicase [EC:5.6.2.3]" }, { "name":"SPSPH_046130 dnaC; (GenBank) Replicative DNA helicase\tK02314 dnaB; replicative DNA helicase [EC:5.6.2.3]" }, { "name":"SPSPH_019630 dnaG; (GenBank) DNA primase\tK02316 dnaG; DNA primase [EC:2.7.7.101]" }, { "name":"SPSPH_024390 ssbA_1; (GenBank) Single-stranded DNA-binding protein A\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_028210 ssbA_2; (GenBank) Single-stranded DNA-binding protein A\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_046200 Single-stranded DNA-binding protein\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_047420 ssb; (GenBank) Single-stranded DNA-binding protein\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_044680 rnhA; (GenBank) Ribonuclease HI\tK03469 rnhA; ribonuclease HI [EC:3.1.26.4]" }, { "name":"SPSPH_016990 rnhB; (GenBank) Ribonuclease HII\tK03470 rnhB; ribonuclease HII [EC:3.1.26.4]" }, { "name":"SPSPH_015960 rnhC; (GenBank) Ribonuclease HIII\tK03471 rnhC; ribonuclease HIII [EC:3.1.26.4]" }, { "name":"SPSPH_022520 polA; (GenBank) DNA polymerase I\tK02335 polA; DNA polymerase I [EC:2.7.7.7]" }, { "name":"SPSPH_026760 ligA; (GenBank) DNA ligase\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]" } ] }, { "name":"03410 Base excision repair [PATH:ssph03410]", "children":[ { "name":"SPSPH_023280 nth; (GenBank) Endonuclease III\tK10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]" }, { "name":"SPSPH_013150 mutY; (GenBank) Adenine DNA glycosylase\tK03575 mutY; A\/G-specific adenine glycosylase [EC:3.2.2.31]" }, { "name":"SPSPH_013480 mutM_1; (GenBank) Formamidopyrimidine-DNA glycosylase\tK10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]" }, { "name":"SPSPH_022510 mutM_2; (GenBank) Formamidopyrimidine-DNA glycosylase\tK10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]" }, { "name":"SPSPH_029420 alkA; (GenBank) putative bifunctional transcriptional activator\/DNA repair enzyme AlkA\tK13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response \/ DNA-3-methyladenine glycosylase II [EC:3.2.2.21]" }, { "name":"SPSPH_014090 tag; (GenBank) DNA-3-methyladenine glycosylase 1\tK01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]" }, { "name":"SPSPH_000780 mug; (GenBank) G\/U mismatch-specific DNA glycosylase\tK03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]" }, { "name":"SPSPH_042150 hypothetical protein\tK21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]" }, { "name":"SPSPH_038950 exoA; (GenBank) Exodeoxyribonuclease\tK01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]" }, { "name":"SPSPH_023080 nfo; (GenBank) endonuclease 4\tK01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]" }, { "name":"SPSPH_022520 polA; (GenBank) DNA polymerase I\tK02335 polA; DNA polymerase I [EC:2.7.7.7]" }, { "name":"SPSPH_020390 hypothetical protein\tK07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]" }, { "name":"SPSPH_026760 ligA; (GenBank) DNA ligase\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]" } ] }, { "name":"03420 Nucleotide excision repair [PATH:ssph03420]", "children":[ { "name":"SPSPH_003260 mfd; (GenBank) Transcription-repair-coupling factor\tK03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]" }, { "name":"SPSPH_030660 uvrA; (GenBank) UvrABC system protein A\tK03701 uvrA; excinuclease ABC subunit A" }, { "name":"SPSPH_030670 uvrB; (GenBank) UvrABC system protein B\tK03702 uvrB; excinuclease ABC subunit B" }, { "name":"SPSPH_030650 uvrC; (GenBank) UvrABC system protein C\tK03703 uvrC; excinuclease ABC subunit C" }, { "name":"SPSPH_026770 pcrA; (GenBank) ATP-dependent DNA helicase PcrA\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]" }, { "name":"SPSPH_035420 helD; (GenBank) DNA helicase IV\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]" }, { "name":"SPSPH_022520 polA; (GenBank) DNA polymerase I\tK02335 polA; DNA polymerase I [EC:2.7.7.7]" }, { "name":"SPSPH_026760 ligA; (GenBank) DNA ligase\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]" } ] }, { "name":"03430 Mismatch repair [PATH:ssph03430]", "children":[ { "name":"SPSPH_018180 mutS; (GenBank) DNA mismatch repair protein MutS\tK03555 mutS; DNA mismatch repair protein MutS" }, { "name":"SPSPH_020050 mutS2; (GenBank) Endonuclease MutS2\tK07456 mutS2; DNA mismatch repair protein MutS2" }, { "name":"SPSPH_018190 mutL; (GenBank) DNA mismatch repair protein MutL\tK03572 mutL; DNA mismatch repair protein MutL" }, { "name":"SPSPH_026770 pcrA; (GenBank) ATP-dependent DNA helicase PcrA\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]" }, { "name":"SPSPH_035420 helD; (GenBank) DNA helicase IV\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]" }, { "name":"SPSPH_020870 xseA; (GenBank) Exodeoxyribonuclease 7 large subunit\tK03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]" }, { "name":"SPSPH_020880 xseB; (GenBank) Exodeoxyribonuclease 7 small subunit\tK03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]" }, { "name":"SPSPH_020390 hypothetical protein\tK07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]" }, { "name":"SPSPH_024390 ssbA_1; (GenBank) Single-stranded DNA-binding protein A\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_028210 ssbA_2; (GenBank) Single-stranded DNA-binding protein A\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_046200 Single-stranded DNA-binding protein\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_047420 ssb; (GenBank) Single-stranded DNA-binding protein\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_022940 dnaE; (GenBank) DNA polymerase III subunit alpha\tK02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]" }, { "name":"SPSPH_017700 polC_1; (GenBank) DNA polymerase III PolC-type\tK03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]" }, { "name":"SPSPH_000020 dnaN; (GenBank) Beta sliding clamp\tK02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]" }, { "name":"SPSPH_042760 ruvB_2; (GenBank) Holliday junction ATP-dependent DNA helicase RuvB\tK02343 dnaX; DNA polymerase III subunit gamma\/tau [EC:2.7.7.7]" }, { "name":"SPSPH_019230 yqeN; (GenBank) putative protein YqeN\tK02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]" }, { "name":"SPSPH_001680 hypothetical protein\tK02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]" }, { "name":"SPSPH_037320 polC_2; (GenBank) DNA polymerase III PolC-type\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]" }, { "name":"SPSPH_026760 ligA; (GenBank) DNA ligase\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]" } ] }, { "name":"03440 Homologous recombination [PATH:ssph03440]", "children":[ { "name":"SPSPH_020390 hypothetical protein\tK07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]" }, { "name":"SPSPH_024390 ssbA_1; (GenBank) Single-stranded DNA-binding protein A\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_028210 ssbA_2; (GenBank) Single-stranded DNA-binding protein A\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_046200 Single-stranded DNA-binding protein\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_047420 ssb; (GenBank) Single-stranded DNA-binding protein\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_000040 recF; (GenBank) DNA replication and repair protein RecF\tK03629 recF; DNA replication and repair protein RecF" }, { "name":"SPSPH_019550 recO; (GenBank) DNA repair protein RecO\tK03584 recO; DNA repair protein RecO (recombination protein O)" }, { "name":"SPSPH_042740 recR; (GenBank) Recombination protein RecR\tK06187 recR; recombination protein RecR" }, { "name":"SPSPH_018060 recA; (GenBank) Protein RecA\tK03553 recA; recombination protein RecA" }, { "name":"SPSPH_022520 polA; (GenBank) DNA polymerase I\tK02335 polA; DNA polymerase I [EC:2.7.7.7]" }, { "name":"SPSPH_020240 ruvA; (GenBank) Holliday junction ATP-dependent DNA helicase RuvA\tK03550 ruvA; holliday junction DNA helicase RuvA" }, { "name":"SPSPH_020250 ruvB_1; (GenBank) Holliday junction ATP-dependent DNA helicase RuvB\tK03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]" }, { "name":"SPSPH_020230 ruvC; (GenBank) Crossover junction endodeoxyribonuclease RuvC\tK01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]" }, { "name":"SPSPH_021490 recG; (GenBank) ATP-dependent DNA helicase RecG\tK03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]" }, { "name":"SPSPH_028030 hypothetical protein\tK03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]" }, { "name":"SPSPH_044720 hypothetical protein\tK03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]" }, { "name":"SPSPH_032690 recD2; (GenBank) ATP-dependent RecD-like DNA helicase\tK03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]" }, { "name":"SPSPH_022940 dnaE; (GenBank) DNA polymerase III subunit alpha\tK02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]" }, { "name":"SPSPH_017700 polC_1; (GenBank) DNA polymerase III PolC-type\tK03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]" }, { "name":"SPSPH_000020 dnaN; (GenBank) Beta sliding clamp\tK02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]" }, { "name":"SPSPH_042760 ruvB_2; (GenBank) Holliday junction ATP-dependent DNA helicase RuvB\tK02343 dnaX; DNA polymerase III subunit gamma\/tau [EC:2.7.7.7]" }, { "name":"SPSPH_019230 yqeN; (GenBank) putative protein YqeN\tK02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]" }, { "name":"SPSPH_001680 hypothetical protein\tK02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]" }, { "name":"SPSPH_037320 polC_2; (GenBank) DNA polymerase III PolC-type\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]" }, { "name":"SPSPH_021710 priA; (GenBank) primosomal protein N'\tK04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]" } ] }, { "name":"03450 Non-homologous end-joining [PATH:ssph03450]", "children":[ { "name":"SPSPH_024620 ku_1; (GenBank) Non-homologous end joining protein Ku\tK10979 ku; DNA end-binding protein Ku" }, { "name":"SPSPH_045050 ku_2; (GenBank) Non-homologous end joining protein Ku\tK10979 ku; DNA end-binding protein Ku" }, { "name":"SPSPH_024610 ligD_1; (GenBank) Multifunctional non-homologous end joining DNA repair protein LigD\tK01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]" }, { "name":"SPSPH_024630 ligD_2; (GenBank) Multifunctional non-homologous end joining protein LigD\tK01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]" } ] }, { "name":"03460 Fanconi anemia pathway" } ] }, { "name":"09126 Chromosome", "children":[ { "name":"03082 ATP-dependent chromatin remodeling" }, { "name":"03083 Polycomb repressive complex" } ] }, { "name":"09125 Information processing in viruses", "children":[ { "name":"03230 Viral genome structure" }, { "name":"03240 Viral replication" }, { "name":"03250 Viral life cycle - HIV-1" }, { "name":"03260 Virion - Human immunodeficiency virus" }, { "name":"03271 Virion - Rotavirus" }, { "name":"03262 Virion - Coronavirus" }, { "name":"03261 Virion - Influenza virus" }, { "name":"03263 Virion - Enterovirus" }, { "name":"03264 Virion - Flavivirus and Alphavirus" }, { "name":"03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus" }, { "name":"03273 Virion - Lassa virus and SFTS virus" }, { "name":"03272 Virion - Hepatitis viruses" }, { "name":"03266 Virion - Herpesvirus" }, { "name":"03268 Virion - Orthopoxvirus" }, { "name":"03267 Virion - Adenovirus" }, { "name":"03259 Virion - Bacteriophages T4 and T7" }, { "name":"03258 Virion - Bacteriophage lambda" } ] } ] }, { "name":"09130 Environmental Information Processing", "children":[ { "name":"09131 Membrane transport", "children":[ { "name":"02010 ABC transporters [PATH:ssph02010]", "children":[ { "name":"SPSPH_008400 sbp; (GenBank) Sulfate-binding protein\tK23163 sbp; sulfate\/thiosulfate transport system substrate-binding protein" }, { "name":"SPSPH_008410 cysT; (GenBank) Sulfate transport system permease protein CysT\tK02046 cysU; sulfate\/thiosulfate transport system permease protein" }, { "name":"SPSPH_008420 cysW; (GenBank) Sulfate transport system permease protein CysW\tK02047 cysW; sulfate\/thiosulfate transport system permease protein" }, { "name":"SPSPH_008430 cysA; (GenBank) Sulfate\/thiosulfate import ATP-binding protein CysA\tK02045 cysA; sulfate\/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]" }, { "name":"SPSPH_014460 tupA; (GenBank) Tungstate-binding protein TupA\tK05772 tupA; tungstate transport system substrate-binding protein" }, { "name":"SPSPH_014470 tupB; (GenBank) Tungstate uptake system permease protein TupB\tK05773 tupB; tungstate transport system permease protein" }, { "name":"SPSPH_014480 btuD_7; (GenBank) Vitamin B12 import ATP-binding protein BtuD\tK06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]" }, { "name":"SPSPH_008690 nrtD_2; (GenBank) Nitrate import ATP-binding protein NrtD\tK15579 nrtD; nitrate\/nitrite transport system ATP-binding protein" }, { "name":"SPSPH_009500 nrtD_3; (GenBank) Nitrate import ATP-binding protein NrtD\tK15579 nrtD; nitrate\/nitrite transport system ATP-binding protein" }, { "name":"SPSPH_029640 tauA; (GenBank) Taurine-binding periplasmic protein\tK15551 tauA; taurine transport system substrate-binding protein" }, { "name":"SPSPH_029650 ssuC_7; (GenBank) Putative aliphatic sulfonates transport permease protein SsuC\tK15552 tauC; taurine transport system permease protein" }, { "name":"SPSPH_008620 hypothetical protein\tK15553 ssuA; sulfonate transport system substrate-binding protein" }, { "name":"SPSPH_008640 hypothetical protein\tK15553 ssuA; sulfonate transport system substrate-binding protein" }, { "name":"SPSPH_008700 hypothetical protein\tK15553 ssuA; sulfonate transport system substrate-binding protein" }, { "name":"SPSPH_009510 hypothetical protein\tK15553 ssuA; sulfonate transport system substrate-binding protein" }, { "name":"SPSPH_009940 hypothetical protein\tK15553 ssuA; sulfonate transport system substrate-binding protein" }, { "name":"SPSPH_029580 ssuA_3; (GenBank) Putative aliphatic sulfonates-binding protein\tK15553 ssuA; sulfonate transport system substrate-binding protein" }, { "name":"SPSPH_008600 hypothetical protein\tK15554 ssuC; sulfonate transport system permease protein" }, { "name":"SPSPH_008650 ssuC_2; (GenBank) Putative aliphatic sulfonates transport permease protein SsuC\tK15554 ssuC; sulfonate transport system permease protein" }, { "name":"SPSPH_008710 hypothetical protein\tK15554 ssuC; sulfonate transport system permease protein" }, { "name":"SPSPH_009490 cmpB; (GenBank) Bicarbonate transport system permease protein CmpB\tK15554 ssuC; sulfonate transport system permease protein" }, { "name":"SPSPH_009920 hypothetical protein\tK15554 ssuC; sulfonate transport system permease protein" }, { "name":"SPSPH_029600 ssuC_6; (GenBank) Putative aliphatic sulfonates transport permease protein SsuC\tK15554 ssuC; sulfonate transport system permease protein" }, { "name":"SPSPH_008610 ssuB_2; (GenBank) Aliphatic sulfonates import ATP-binding protein SsuB\tK15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]" }, { "name":"SPSPH_009930 ssuB_3; (GenBank) Aliphatic sulfonates import ATP-binding protein SsuB\tK15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]" }, { "name":"SPSPH_029590 ssuB_5; (GenBank) Aliphatic sulfonates import ATP-binding protein SsuB\tK15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]" }, { "name":"SPSPH_029630 tauB; (GenBank) Taurine import ATP-binding protein TauB\tK15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]" }, { "name":"SPSPH_008790 modA_1; (GenBank) Molybdate-binding protein ModA\tK02020 modA; molybdate transport system substrate-binding protein" }, { "name":"SPSPH_023830 modA_2; (GenBank) Molybdate-binding protein ModA\tK02020 modA; molybdate transport system substrate-binding protein" }, { "name":"SPSPH_023840 modA_3; (GenBank) Molybdate-binding protein ModA\tK02020 modA; molybdate transport system substrate-binding protein" }, { "name":"SPSPH_023820 modB; (GenBank) Molybdenum transport system permease protein ModB\tK02018 modB; molybdate transport system permease protein" }, { "name":"SPSPH_023810 potA; (GenBank) Spermidine\/putrescine import ATP-binding protein PotA\tK02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]" }, { "name":"SPSPH_018020 hypothetical protein\tK02012 afuA; iron(III) transport system substrate-binding protein" }, { "name":"SPSPH_029380 hypothetical protein\tK02012 afuA; iron(III) transport system substrate-binding protein" }, { "name":"SPSPH_029360 hypothetical protein\tK02011 afuB; iron(III) transport system permease protein" }, { "name":"SPSPH_029370 msiK; (GenBank) Diacetylchitobiose uptake system ATP-binding protein MsiK\tK02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]" }, { "name":"SPSPH_006030 opuCC; (GenBank) Glycine betaine\/carnitine\/choline-binding protein OpuCC\tK05845 opuC; osmoprotectant transport system substrate-binding protein" }, { "name":"SPSPH_006010 opuBB; (GenBank) Choline transport system permease protein OpuBB\tK05846 opuBD; osmoprotectant transport system permease protein" }, { "name":"SPSPH_006020 opuCB; (GenBank) Carnitine transport permease protein OpuCB\tK05846 opuBD; osmoprotectant transport system permease protein" }, { "name":"SPSPH_006040 opuCA; (GenBank) Carnitine transport ATP-binding protein OpuCA\tK05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]" }, { "name":"SPSPH_033520 hypothetical protein\tK02067 mlaD; phospholipid\/cholesterol\/gamma-HCH transport system substrate-binding protein" }, { "name":"SPSPH_033540 mlaE; (GenBank) Intermembrane phospholipid transport system permease protein MlaE\tK02066 mlaE; phospholipid\/cholesterol\/gamma-HCH transport system permease protein" }, { "name":"SPSPH_033530 mkl; (GenBank) putative ribonucleotide transport ATP-binding protein mkl\tK02065 mlaF; phospholipid\/cholesterol\/gamma-HCH transport system ATP-binding protein" }, { "name":"SPSPH_003510 pstS1; (GenBank) Phosphate-binding protein PstS 1\tK02040 pstS; phosphate transport system substrate-binding protein" }, { "name":"SPSPH_037140 pstS; (GenBank) Phosphate-binding protein PstS\tK02040 pstS; phosphate transport system substrate-binding protein" }, { "name":"SPSPH_003520 hypothetical protein\tK02037 pstC; phosphate transport system permease protein" }, { "name":"SPSPH_037130 pstC; (GenBank) Phosphate transport system permease protein PstC\tK02037 pstC; phosphate transport system permease protein" }, { "name":"SPSPH_003530 hypothetical protein\tK02038 pstA; phosphate transport system permease protein" }, { "name":"SPSPH_037120 hypothetical protein\tK02038 pstA; phosphate transport system permease protein" }, { "name":"SPSPH_003480 pstB3; (GenBank) Phosphate import ATP-binding protein PstB 3\tK02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]" }, { "name":"SPSPH_037110 pstB; (GenBank) Phosphate import ATP-binding protein PstB\tK02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]" }, { "name":"SPSPH_008550 phnD2; (GenBank) putative ABC transporter phosphonate\/phosphite binding protein PhnD2\tK02044 phnD; phosphonate transport system substrate-binding protein" }, { "name":"SPSPH_008570 phnE; (GenBank) Phosphate-import permease protein PhnE\tK02042 phnE; phosphonate transport system permease protein" }, { "name":"SPSPH_008560 ftsE_1; (GenBank) Cell division ATP-binding protein FtsE\tK02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]" }, { "name":"SPSPH_000790 glnH_1; (GenBank) Glutamine-binding periplasmic protein\tK10036 glnH; glutamine transport system substrate-binding protein" }, { "name":"SPSPH_030900 glnH_3; (GenBank) Glutamine-binding periplasmic protein\tK10036 glnH; glutamine transport system substrate-binding protein" }, { "name":"SPSPH_030890 glnP_3; (GenBank) Glutamine transport system permease protein GlnP\tK10037 glnP; glutamine transport system permease protein" }, { "name":"SPSPH_030880 glnQ_4; (GenBank) Glutamine transport ATP-binding protein GlnQ\tK10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"SPSPH_006470 peb1A; (GenBank) Major cell-binding factor\tK10039 peb1A; aspartate\/glutamate\/glutamine transport system substrate-binding protein" }, { "name":"SPSPH_006450 glnP_1; (GenBank) putative glutamine ABC transporter permease protein GlnP\tK10040 peb1B; aspartate\/glutamate\/glutamine transport system permease protein" }, { "name":"SPSPH_006460 glnM; (GenBank) putative glutamine ABC transporter permease protein GlnM\tK10040 peb1B; aspartate\/glutamate\/glutamine transport system permease protein" }, { "name":"SPSPH_006480 glnQ_1; (GenBank) Glutamine transport ATP-binding protein GlnQ\tK10041 peb1C; aspartate\/glutamate\/glutamine transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"SPSPH_029310 tcyK; (GenBank) L-cystine-binding protein TcyK\tK16957 tcyK; L-cystine transport system substrate-binding protein" }, { "name":"SPSPH_029280 tcyN; (GenBank) L-cystine import ATP-binding protein TcyN\tK16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"SPSPH_029290 yxeN_1; (GenBank) putative amino-acid permease protein YxeN\tK16962 yxeN; putative S-methylcysteine transport system permease protein" }, { "name":"SPSPH_029300 yxeN_2; (GenBank) putative amino-acid permease protein YxeN\tK16962 yxeN; putative S-methylcysteine transport system permease protein" }, { "name":"SPSPH_011170 hisJ; (GenBank) putative histidine-binding protein\tK17073 lysX1; putative lysine transport system substrate-binding protein" }, { "name":"SPSPH_011180 hypothetical protein\tK17073 lysX1; putative lysine transport system substrate-binding protein" }, { "name":"SPSPH_011190 glnQ_3; (GenBank) Glutamine transport ATP-binding protein GlnQ\tK17076 lysY; putative lysine transport system ATP-binding protein" }, { "name":"SPSPH_002480 braC_1; (GenBank) Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SPSPH_010170 braC_2; (GenBank) Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SPSPH_021990 Leu\/Ile\/Val-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SPSPH_038570 livK_1; (GenBank) Leucine-specific-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SPSPH_046340 livK_2; (GenBank) Leucine-specific-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SPSPH_046350 braC_3; (GenBank) Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SPSPH_046330 livH; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"SPSPH_046320 hypothetical protein\tK01998 livM; branched-chain amino acid transport system permease protein" }, { "name":"SPSPH_046310 lptB_2; (GenBank) Lipopolysaccharide export system ATP-binding protein LptB\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"SPSPH_046300 livF; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"SPSPH_000350 metQ_1; (GenBank) D-methionine-binding lipoprotein MetQ\tK02073 metQ; D-methionine transport system substrate-binding protein" }, { "name":"SPSPH_025110 metQ_2; (GenBank) Methionine-binding lipoprotein MetQ\tK02073 metQ; D-methionine transport system substrate-binding protein" }, { "name":"SPSPH_027540 metQ_3; (GenBank) D-methionine-binding lipoprotein MetQ\tK02073 metQ; D-methionine transport system substrate-binding protein" }, { "name":"SPSPH_000330 metI; (GenBank) D-methionine transport system permease protein MetI\tK02072 metI; D-methionine transport system permease protein" }, { "name":"SPSPH_025120 metP; (GenBank) Methionine import system permease protein MetP\tK02072 metI; D-methionine transport system permease protein" }, { "name":"SPSPH_000320 metN; (GenBank) Methionine import ATP-binding protein MetN\tK02071 metN; D-methionine transport system ATP-binding protein" }, { "name":"SPSPH_025130 metN2; (GenBank) Methionine import ATP-binding protein MetN 2\tK02071 metN; D-methionine transport system ATP-binding protein" }, { "name":"SPSPH_036620 oppF_2; (GenBank) Oligopeptide transport ATP-binding protein OppF\tK10823 oppF; oligopeptide transport system ATP-binding protein" }, { "name":"SPSPH_006270 nikA_1; (GenBank) Nickel-binding periplasmic protein\tK15584 nikA; nickel transport system substrate-binding protein" }, { "name":"SPSPH_036130 nikA_2; (GenBank) Nickel-binding periplasmic protein\tK15584 nikA; nickel transport system substrate-binding protein" }, { "name":"SPSPH_006280 nikB_2; (GenBank) Nickel transport system permease protein NikB\tK15585 nikB; nickel transport system permease protein" }, { "name":"SPSPH_036120 nikB_3; (GenBank) Nickel transport system permease protein NikB\tK15585 nikB; nickel transport system permease protein" }, { "name":"SPSPH_006290 cntC; (GenBank) Metal-staphylopine import system permease protein CntC\tK15586 nikC; nickel transport system permease protein" }, { "name":"SPSPH_036110 nikC; (GenBank) Nickel transport system permease protein NikC\tK15586 nikC; nickel transport system permease protein" }, { "name":"SPSPH_006300 cntD_1; (GenBank) Metal-staphylopine import system ATP-binding protein CntD\tK15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]" }, { "name":"SPSPH_006310 cntF; (GenBank) Metal-staphylopine import system ATP-binding protein CntF\tK10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]" }, { "name":"SPSPH_036090 gsiA_1; (GenBank) Glutathione import ATP-binding protein GsiA\tK10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]" }, { "name":"SPSPH_036650 gsiC_3; (GenBank) Glutathione transport system permease protein GsiC\tK13890 gsiC; glutathione transport system permease protein" }, { "name":"SPSPH_015500 znuA; (GenBank) High-affinity zinc uptake system binding-protein ZnuA\tK09815 znuA; zinc transport system substrate-binding protein" }, { "name":"SPSPH_015530 znuB; (GenBank) High-affinity zinc uptake system membrane protein ZnuB\tK09816 znuB; zinc transport system permease protein" }, { "name":"SPSPH_015520 znuC; (GenBank) High-affinity zinc uptake system ATP-binding protein ZnuC\tK09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]" }, { "name":"SPSPH_025540 troA; (GenBank) Periplasmic zinc-binding protein TroA\tK11707 troA; manganese\/zinc\/iron transport system substrate-binding protein" }, { "name":"SPSPH_025520 mntC; (GenBank) Manganese transport system membrane protein MntC\tK11708 troC; manganese\/zinc\/iron transport system permease protein" }, { "name":"SPSPH_025510 hypothetical protein\tK11709 troD; manganese\/zinc\/iron transport system permease protein" }, { "name":"SPSPH_025530 mntB; (GenBank) Manganese transport system ATP-binding protein MntB\tK11710 troB; manganese\/zinc\/iron transport system ATP- binding protein [EC:7.2.2.5]" }, { "name":"SPSPH_036420 cbiM; (GenBank) Cobalt transport protein CbiM\tK02007 cbiM; cobalt\/nickel transport system permease protein" }, { "name":"SPSPH_036430 hypothetical protein\tK02008 cbiQ; cobalt\/nickel transport system permease protein" }, { "name":"SPSPH_036440 ecfA3; (GenBank) Energy-coupling factor transporter ATP-binding protein EcfA3\tK02006 cbiO; cobalt\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_003860 bioY; (GenBank) Biotin transporter BioY\tK03523 bioY; biotin transport system substrate-specific component" }, { "name":"SPSPH_000620 ecfT_1; (GenBank) Energy-coupling factor transporter transmembrane protein EcfT\tK16785 ecfT; energy-coupling factor transport system permease protein" }, { "name":"SPSPH_004970 ecfT_2; (GenBank) Energy-coupling factor transporter transmembrane protein EcfT\tK16785 ecfT; energy-coupling factor transport system permease protein" }, { "name":"SPSPH_006400 ecfT_3; (GenBank) Energy-coupling factor transporter transmembrane protein EcfT\tK16785 ecfT; energy-coupling factor transport system permease protein" }, { "name":"SPSPH_007630 ecfT_4; (GenBank) Energy-coupling factor transporter transmembrane protein EcfT\tK16785 ecfT; energy-coupling factor transport system permease protein" }, { "name":"SPSPH_007700 ecfT_5; (GenBank) Energy-coupling factor transporter transmembrane protein EcfT\tK16785 ecfT; energy-coupling factor transport system permease protein" }, { "name":"SPSPH_007880 ecfT_6; (GenBank) Energy-coupling factor transporter transmembrane protein EcfT\tK16785 ecfT; energy-coupling factor transport system permease protein" }, { "name":"SPSPH_004950 ecfA1_2; (GenBank) Energy-coupling factor transporter ATP-binding protein EcfA1\tK16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]" }, { "name":"SPSPH_000610 ecfA2_1; (GenBank) Energy-coupling factor transporter ATP-binding protein EcfA2\tK16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]" }, { "name":"SPSPH_004960 ecfA2_2; (GenBank) Energy-coupling factor transporter ATP-binding protein EcfA2\tK16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]" }, { "name":"SPSPH_033020 hypothetical protein\tK09690 wzm; homopolymeric O-antigen transport system permease protein" }, { "name":"SPSPH_033010 btuD_9; (GenBank) Vitamin B12 import ATP-binding protein BtuD\tK09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]" }, { "name":"SPSPH_042350 yadH_4; (GenBank) Inner membrane transport permease YadH\tK09694 nodJ; lipooligosaccharide transport system permease protein" }, { "name":"SPSPH_042360 lnrL_4; (GenBank) Linearmycin resistance ATP-binding protein LnrL\tK09695 nodI; lipooligosaccharide transport system ATP-binding protein" }, { "name":"SPSPH_034230 ccsA; (GenBank) Cytochrome c biogenesis protein CcsA\tK02195 ccmC; heme exporter protein C" }, { "name":"SPSPH_034240 hypothetical protein\tK02194 ccmB; heme exporter protein B" }, { "name":"SPSPH_034250 lnrL_2; (GenBank) Linearmycin resistance ATP-binding protein LnrL\tK02193 ccmA; heme exporter protein A [EC:7.6.2.5]" }, { "name":"SPSPH_033220 lptG; (GenBank) Lipopolysaccharide export system permease protein LptG\tK11720 lptG; lipopolysaccharide export system permease protein" }, { "name":"SPSPH_033230 lptB_1; (GenBank) Lipopolysaccharide export system ATP-binding protein LptB\tK06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]" }, { "name":"SPSPH_030710 ftsX; (GenBank) Cell division protein FtsX\tK09811 ftsX; cell division transport system permease protein" }, { "name":"SPSPH_030720 ftsE_2; (GenBank) Cell division ATP-binding protein FtsE\tK09812 ftsE; cell division transport system ATP-binding protein" }, { "name":"SPSPH_007670 Putative multidrug export ATP-binding\/permease protein\tK14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA\/YbtP [EC:7.-.-.-]" }, { "name":"SPSPH_007730 btuD_3; (GenBank) Vitamin B12 import ATP-binding protein BtuD\tK14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA\/YbtP [EC:7.-.-.-]" }, { "name":"SPSPH_007820 btuD_4; (GenBank) Vitamin B12 import ATP-binding protein BtuD\tK14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA\/YbtP [EC:7.-.-.-]" }, { "name":"SPSPH_008020 Putative multidrug export ATP-binding\/permease protein\tK14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA\/YbtP [EC:7.-.-.-]" }, { "name":"SPSPH_008080 irtA_1; (GenBank) Iron import ATP-binding\/permease protein IrtA\tK14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA\/YbtP [EC:7.-.-.-]" }, { "name":"SPSPH_035780 irtA_2; (GenBank) Iron import ATP-binding\/permease protein IrtA\tK14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA\/YbtP [EC:7.-.-.-]" }, { "name":"SPSPH_038360 btuD_10; (GenBank) Vitamin B12 import ATP-binding protein BtuD\tK14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA\/YbtP [EC:7.-.-.-]" }, { "name":"SPSPH_007680 btuD_2; (GenBank) Vitamin B12 import ATP-binding protein BtuD\tK14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB\/YbtQ [EC:7.-.-.-]" }, { "name":"SPSPH_007740 msbA_1; (GenBank) Lipid A export ATP-binding\/permease protein MsbA\tK14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB\/YbtQ [EC:7.-.-.-]" }, { "name":"SPSPH_007830 msbA_2; (GenBank) Lipid A export ATP-binding\/permease protein MsbA\tK14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB\/YbtQ [EC:7.-.-.-]" }, { "name":"SPSPH_008030 msbA_3; (GenBank) Lipid A export ATP-binding\/permease protein MsbA\tK14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB\/YbtQ [EC:7.-.-.-]" }, { "name":"SPSPH_008090 msbA_4; (GenBank) Lipid A export ATP-binding\/permease protein MsbA\tK14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB\/YbtQ [EC:7.-.-.-]" }, { "name":"SPSPH_035790 putative ABC transporter ATP-binding protein\tK14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB\/YbtQ [EC:7.-.-.-]" }, { "name":"SPSPH_038350 Putative multidrug export ATP-binding\/permease protein\tK14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB\/YbtQ [EC:7.-.-.-]" }, { "name":"SPSPH_033320 Putative multidrug export ATP-binding\/permease protein\tK11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]" }, { "name":"SPSPH_015350 putative ABC transporter ATP-binding protein\tK18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump" }, { "name":"SPSPH_015340 putative ABC transporter ATP-binding protein\tK18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump" }, { "name":"SPSPH_001370 putative ABC transporter ATP-binding\/permease protein\tK16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC" }, { "name":"SPSPH_001380 cydD; (GenBank) ATP-binding\/permease protein CydD\tK16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD" }, { "name":"SPSPH_039850 expZ; (GenBank) Nucleotide-binding protein ExpZ\tK19350 lsa; lincosamide and streptogramin A transport system ATP-binding\/permease protein" }, { "name":"SPSPH_001760 bacA_1; (GenBank) Vitamin B12 transport ATP-binding protein BacA\tK02471 bacA; vitamin B12\/bleomycin\/antimicrobial peptide transport system ATP-binding\/permease protein" }, { "name":"SPSPH_007040 bacA_2; (GenBank) Vitamin B12 transport ATP-binding protein BacA\tK02471 bacA; vitamin B12\/bleomycin\/antimicrobial peptide transport system ATP-binding\/permease protein" } ] }, { "name":"02060 Phosphotransferase system (PTS) [PATH:ssph02060]", "children":[ { "name":"SPSPH_046020 ptsI; (GenBank) Phosphoenolpyruvate-protein phosphotransferase\tK08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]" }, { "name":"SPSPH_046030 ptsH; (GenBank) Phosphocarrier protein HPr\tK02784 ptsH; phosphocarrier protein HPr" } ] }, { "name":"03070 Bacterial secretion system [PATH:ssph03070]", "children":[ { "name":"SPSPH_005700 tolC_2; (GenBank) Outer membrane protein TolC\tK12340 tolC; outer membrane protein" }, { "name":"SPSPH_033510 hypothetical protein\tK12340 tolC; outer membrane protein" }, { "name":"SPSPH_039650 oprM; (GenBank) Outer membrane protein OprM\tK12340 tolC; outer membrane protein" }, { "name":"SPSPH_047140 hypothetical protein\tK02456 gspG; general secretion pathway protein G" }, { "name":"SPSPH_020340 secDF; (GenBank) Protein translocase subunit SecDF\tK03072 secD; preprotein translocase subunit SecD" }, { "name":"SPSPH_020350 secF; (GenBank) Protein translocase subunit SecF\tK03074 secF; preprotein translocase subunit SecF" }, { "name":"SPSPH_004510 secE; (GenBank) Protein translocase subunit SecE\tK03073 secE; preprotein translocase subunit SecE" }, { "name":"SPSPH_030240 secG; (GenBank) putative protein-export membrane protein SecG\tK03075 secG; preprotein translocase subunit SecG" }, { "name":"SPSPH_004850 secY; (GenBank) Protein translocase subunit SecY\tK03076 secY; preprotein translocase subunit SecY" }, { "name":"SPSPH_020310 hypothetical protein\tK03210 yajC; preprotein translocase subunit YajC" }, { "name":"SPSPH_046640 yidC2; (GenBank) Membrane protein insertase YidC 2\tK03217 yidC; YidC\/Oxa1 family membrane protein insertase" }, { "name":"SPSPH_030810 secA; (GenBank) Protein translocase subunit SecA\tK03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]" }, { "name":"SPSPH_016860 ftsY; (GenBank) Signal recognition particle receptor FtsY\tK03110 ftsY; fused signal recognition particle receptor" }, { "name":"SPSPH_016880 ffh; (GenBank) Signal recognition particle protein\tK03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]" }, { "name":"SPSPH_013780 tatA; (GenBank) Sec-independent protein translocase protein TatA\tK03116 tatA; sec-independent protein translocase protein TatA" }, { "name":"SPSPH_013790 tatC; (GenBank) Sec-independent protein translocase protein TatC\tK03118 tatC; sec-independent protein translocase protein TatC" } ] } ] }, { "name":"09132 Signal transduction", "children":[ { "name":"02020 Two-component system [PATH:ssph02020]", "children":[ { "name":"SPSPH_003500 phoR; (GenBank) Alkaline phosphatase synthesis sensor protein PhoR\tK07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]" }, { "name":"SPSPH_003310 phoP_1; (GenBank) Alkaline phosphatase synthesis transcriptional regulatory protein PhoP\tK07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP" }, { "name":"SPSPH_038740 phoP_4; (GenBank) Alkaline phosphatase synthesis transcriptional regulatory protein PhoP\tK07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP" }, { "name":"SPSPH_026510 phoA_1; (GenBank) Alkaline phosphatase 4\tK01077 ALP; alkaline phosphatase [EC:3.1.3.1]" }, { "name":"SPSPH_046100 phoA_2; (GenBank) Alkaline phosphatase 4\tK01077 ALP; alkaline phosphatase [EC:3.1.3.1]" }, { "name":"SPSPH_003510 pstS1; (GenBank) Phosphate-binding protein PstS 1\tK02040 pstS; phosphate transport system substrate-binding protein" }, { "name":"SPSPH_037140 pstS; (GenBank) Phosphate-binding protein PstS\tK02040 pstS; phosphate transport system substrate-binding protein" }, { "name":"SPSPH_040770 htrA; (GenBank) Putative serine protease HtrA\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SPSPH_005270 tolC_1; (GenBank) Outer membrane protein TolC\tK07796 cusC; outer membrane protein, copper\/silver efflux system" }, { "name":"SPSPH_005280 cusB; (GenBank) Cation efflux system protein CusB\tK07798 cusB; membrane fusion protein, copper\/silver efflux system" }, { "name":"SPSPH_005290 cusA; (GenBank) Cation efflux system protein CusA\tK07787 cusA; copper\/silver efflux system protein" }, { "name":"SPSPH_005880 fliC; (GenBank) A-type flagellin\tK02406 fliC; flagellin" }, { "name":"SPSPH_032360 hypothetical protein\tK02406 fliC; flagellin" }, { "name":"SPSPH_032550 hypothetical protein\tK02406 fliC; flagellin" }, { "name":"SPSPH_017530 sigD_1; (GenBank) RNA polymerase sigma-D factor\tK02405 fliA; RNA polymerase sigma factor FliA" }, { "name":"SPSPH_011990 pomA; (GenBank) Chemotaxis protein PomA\tK02556 motA; chemotaxis protein MotA" }, { "name":"SPSPH_008300 kdpD; (GenBank) Sensor protein KdpD\tK07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]" }, { "name":"SPSPH_002180 walR; (GenBank) Transcriptional regulatory protein WalR\tK07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE" }, { "name":"SPSPH_008310 kdpE; (GenBank) KDP operon transcriptional regulatory protein KdpE\tK07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE" }, { "name":"SPSPH_008320 kdpA; (GenBank) Potassium-transporting ATPase potassium-binding subunit\tK01546 kdpA; potassium-transporting ATPase potassium-binding subunit" }, { "name":"SPSPH_008330 kdpB; (GenBank) Potassium-transporting ATPase ATP-binding subunit\tK01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]" }, { "name":"SPSPH_008340 kdpC; (GenBank) Potassium-transporting ATPase KdpC subunit\tK01548 kdpC; potassium-transporting ATPase KdpC subunit" }, { "name":"SPSPH_031060 hypothetical protein\tK07793 tctA; putative tricarboxylic transport membrane protein" }, { "name":"SPSPH_036340 hypothetical protein\tK07793 tctA; putative tricarboxylic transport membrane protein" }, { "name":"SPSPH_040020 hypothetical protein\tK07793 tctA; putative tricarboxylic transport membrane protein" }, { "name":"SPSPH_041590 hypothetical protein\tK07793 tctA; putative tricarboxylic transport membrane protein" }, { "name":"SPSPH_031070 hypothetical protein\tK07794 tctB; putative tricarboxylic transport membrane protein" }, { "name":"SPSPH_036330 hypothetical protein\tK07794 tctB; putative tricarboxylic transport membrane protein" }, { "name":"SPSPH_040030 hypothetical protein\tK07794 tctB; putative tricarboxylic transport membrane protein" }, { "name":"SPSPH_036290 hypothetical protein\tK07795 tctC; putative tricarboxylic transport membrane protein" }, { "name":"SPSPH_040040 hypothetical protein\tK07795 tctC; putative tricarboxylic transport membrane protein" }, { "name":"SPSPH_041610 hypothetical protein\tK07795 tctC; putative tricarboxylic transport membrane protein" }, { "name":"SPSPH_006090 srrA_1; (GenBank) Transcriptional regulatory protein SrrA\tK07775 resD; two-component system, OmpR family, response regulator ResD" }, { "name":"SPSPH_000010 dnaA; (GenBank) Chromosomal replication initiator protein DnaA\tK02313 dnaA; chromosomal replication initiator protein" }, { "name":"SPSPH_002660 cheB_1; (GenBank) Protein-glutamate methylesterase\/protein-glutamine glutaminase\tK02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F" }, { "name":"SPSPH_018230 spo0A; (GenBank) Stage 0 sporulation protein A\tK07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A" }, { "name":"SPSPH_031550 citC; (GenBank) [Citrate [pro-3S]-lyase] ligase\tK01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]" }, { "name":"SPSPH_031580 citD_1; (GenBank) Citrate lyase acyl carrier protein\tK01646 citD; citrate lyase subunit gamma (acyl carrier protein)" }, { "name":"SPSPH_039970 citD_2; (GenBank) Citrate lyase acyl carrier protein\tK01646 citD; citrate lyase subunit gamma (acyl carrier protein)" }, { "name":"SPSPH_031570 citE_1; (GenBank) Citrate lyase subunit beta\tK01644 citE; citrate lyase subunit beta \/ citryl-CoA lyase [EC:4.1.3.34]" }, { "name":"SPSPH_039960 citE_2; (GenBank) Citrate lyase subunit beta\tK01644 citE; citrate lyase subunit beta \/ citryl-CoA lyase [EC:4.1.3.34]" }, { "name":"SPSPH_031560 citF_2; (GenBank) Citrate lyase alpha chain\tK01643 citF; citrate lyase subunit alpha \/ citrate CoA-transferase [EC:2.8.3.10]" }, { "name":"SPSPH_039950 citF_3; (GenBank) Citrate lyase alpha chain\tK01643 citF; citrate lyase subunit alpha \/ citrate CoA-transferase [EC:2.8.3.10]" }, { "name":"SPSPH_012420 dcuR; (GenBank) Transcriptional regulatory protein DcuR\tK11692 K11692; two-component system, CitB family, response regulator DctR" }, { "name":"SPSPH_040070 NAD-dependent malic enzyme\tK00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]" }, { "name":"SPSPH_039380 ypdA_2; (GenBank) Sensor histidine kinase YpdA\tK07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]" }, { "name":"SPSPH_045960 L-lactate transporter\tK08177 oxlT; MFS transporter, OFA family, oxalate\/formate antiporter" }, { "name":"SPSPH_042630 uhpC; (GenBank) Membrane sensor protein UhpC\tK07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC" }, { "name":"SPSPH_032590 csrA; (GenBank) Translational regulator CsrA\tK03563 csrA; carbon storage regulator" }, { "name":"SPSPH_001620 degS; (GenBank) Signal transduction histidine-protein kinase\/phosphatase DegS\tK07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]" }, { "name":"SPSPH_042040 glnB_3; (GenBank) Nitrogen regulatory protein P-II\tK04751 glnB; nitrogen regulatory protein P-II 1" }, { "name":"SPSPH_019730 hypothetical protein\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"SPSPH_001170 atoC_1; (GenBank) Regulatory protein AtoC\tK07714 atoC; two-component system, NtrC family, response regulator AtoC" }, { "name":"SPSPH_035500 atoC_3; (GenBank) Regulatory protein AtoC\tK07714 atoC; two-component system, NtrC family, response regulator AtoC" }, { "name":"SPSPH_041910 atoC_4; (GenBank) Regulatory protein AtoC\tK07714 atoC; two-component system, NtrC family, response regulator AtoC" }, { "name":"SPSPH_041780 atoE_1; (GenBank) Putative short-chain fatty acid transporter\tK02106 atoE; short-chain fatty acids transporter" }, { "name":"SPSPH_041900 atoE_2; (GenBank) Putative short-chain fatty acid transporter\tK02106 atoE; short-chain fatty acids transporter" }, { "name":"SPSPH_001550 thlA_1; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_007500 thlA_2; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_041940 thlA_3; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_030100 dctA2; (GenBank) C4-dicarboxylate transport protein 2\tK11103 dctA; aerobic C4-dicarboxylate transport protein" }, { "name":"SPSPH_030410 rpoN; (GenBank) RNA polymerase sigma-54 factor\tK03092 rpoN; RNA polymerase sigma-54 factor" }, { "name":"SPSPH_015730 hypothetical protein\tK02650 pilA; type IV pilus assembly protein PilA" }, { "name":"SPSPH_015420 hoxK; (GenBank) Uptake hydrogenase small subunit\tK06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]" }, { "name":"SPSPH_040810 hypothetical protein\tK06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]" }, { "name":"SPSPH_015430 hoxG; (GenBank) Uptake hydrogenase large subunit\tK06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]" }, { "name":"SPSPH_040800 Periplasmic [NiFeSe] hydrogenase large subunit\tK06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]" }, { "name":"SPSPH_002540 hypothetical protein\tK03620 hyaC; Ni\/Fe-hydrogenase 1 B-type cytochrome subunit" }, { "name":"SPSPH_015440 hydC; (GenBank) Quinone-reactive Ni\/Fe-hydrogenase B-type cytochrome subunit\tK03620 hyaC; Ni\/Fe-hydrogenase 1 B-type cytochrome subunit" }, { "name":"SPSPH_001050 cheR; (GenBank) Chemotaxis protein methyltransferase\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"SPSPH_000130 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_001180 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_004190 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_005490 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_006110 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_007180 yoaH; (GenBank) Putative methyl-accepting chemotaxis protein YoaH\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_007240 mcpA_1; (GenBank) Methyl-accepting chemotaxis protein McpA\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_007570 mcpB_1; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_009230 mcpB_2; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_009360 mcpB_3; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_009630 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_011020 mcpB_4; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_011340 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_022770 mcpA_2; (GenBank) Methyl-accepting chemotaxis protein McpA\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_025200 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_026640 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_026890 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_027600 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_031690 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_034730 pctB; (GenBank) Methyl-accepting chemotaxis protein PctB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_035030 mcpB_5; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_035550 mcpB_6; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_036360 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_037490 mcpB_7; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_037820 mcpB_8; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_037880 mcpB_9; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_038060 mcpB_10; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_039280 mcpB_11; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_039300 mcp4; (GenBank) Methyl-accepting chemotaxis protein 4\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_039940 mcpA_4; (GenBank) Methyl-accepting chemotaxis protein McpA\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_041880 mcpB_12; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_042110 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_042280 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_042900 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_001920 cheW_1; (GenBank) Chemotaxis protein CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SPSPH_017490 cheW_2; (GenBank) Chemotaxis protein CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SPSPH_017480 cheA; (GenBank) Chemotaxis protein CheA\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SPSPH_034270 rcsC_7; (GenBank) Sensor histidine kinase RcsC\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SPSPH_034720 rcsC_8; (GenBank) Sensor histidine kinase RcsC\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SPSPH_037440 hypothetical protein\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SPSPH_017370 cheY_1; (GenBank) Chemotaxis protein CheY\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SPSPH_022280 cheY_2; (GenBank) Chemotaxis protein CheY\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SPSPH_023480 cheB_6; (GenBank) Protein-glutamate methylesterase\/protein-glutamine glutaminase\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SPSPH_027230 cheY_3; (GenBank) Chemotaxis protein CheY\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SPSPH_017470 cheB_5; (GenBank) Protein-glutamate methylesterase\/protein-glutamine glutaminase\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SPSPH_046610 cheV; (GenBank) Chemotaxis protein CheV\tK03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV" }, { "name":"SPSPH_002210 glxR; (GenBank) CRP-like cAMP-activated global transcriptional regulator\tK10914 crp; CRP\/FNR family transcriptional regulator, cyclic AMP receptor protein" }, { "name":"SPSPH_009810 crp_1; (GenBank) CRP-like cAMP-activated global transcriptional regulator\tK10914 crp; CRP\/FNR family transcriptional regulator, cyclic AMP receptor protein" }, { "name":"SPSPH_034130 crp_2; (GenBank) cAMP-activated global transcriptional regulator CRP\tK10914 crp; CRP\/FNR family transcriptional regulator, cyclic AMP receptor protein" }, { "name":"SPSPH_041110 glnK; (GenBank) Sensor histidine kinase GlnK\tK07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]" }, { "name":"SPSPH_041100 cheB_12; (GenBank) Protein-glutamate methylesterase\/protein-glutamine glutaminase\tK07719 glnL; two-component system, response regulator GlnL" }, { "name":"SPSPH_029350 hypothetical protein\tK07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]" }, { "name":"SPSPH_010650 cheB_4; (GenBank) Protein-glutamate methylesterase\/protein-glutamine glutaminase\tK07720 yesN; two-component system, response regulator YesN" }, { "name":"SPSPH_029340 putative response regulatory protein\tK07720 yesN; two-component system, response regulator YesN" }, { "name":"SPSPH_001200 cydA_1; (GenBank) Cytochrome bd ubiquinol oxidase subunit 1\tK00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]" }, { "name":"SPSPH_025990 cydA_2; (GenBank) Cytochrome bd ubiquinol oxidase subunit 1\tK00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]" }, { "name":"SPSPH_001210 cydB_1; (GenBank) Cytochrome bd-I ubiquinol oxidase subunit 2\tK00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]" }, { "name":"SPSPH_026000 cydB_2; (GenBank) Cytochrome bd-I ubiquinol oxidase subunit 2\tK00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]" }, { "name":"SPSPH_005700 tolC_2; (GenBank) Outer membrane protein TolC\tK12340 tolC; outer membrane protein" }, { "name":"SPSPH_033510 hypothetical protein\tK12340 tolC; outer membrane protein" }, { "name":"SPSPH_039650 oprM; (GenBank) Outer membrane protein OprM\tK12340 tolC; outer membrane protein" }, { "name":"SPSPH_033830 mnaA; (GenBank) UDP-N-acetylglucosamine 2-epimerase\tK01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]" }, { "name":"SPSPH_032650 hypothetical protein\tK02398 flgM; negative regulator of flagellin synthesis FlgM" } ] }, { "name":"04010 MAPK signaling pathway" }, { "name":"04013 MAPK signaling pathway - fly" }, { "name":"04016 MAPK signaling pathway - plant" }, { "name":"04011 MAPK signaling pathway - yeast" }, { "name":"04012 ErbB signaling pathway" }, { "name":"04014 Ras signaling pathway" }, { "name":"04015 Rap1 signaling pathway" }, { "name":"04310 Wnt signaling pathway" }, { "name":"04330 Notch signaling pathway" }, { "name":"04340 Hedgehog signaling pathway" }, { "name":"04341 Hedgehog signaling pathway - fly" }, { "name":"04350 TGF-beta signaling pathway" }, { "name":"04390 Hippo signaling pathway" }, { "name":"04391 Hippo signaling pathway - fly" }, { "name":"04392 Hippo signaling pathway - multiple species" }, { "name":"04370 VEGF signaling pathway" }, { "name":"04371 Apelin signaling pathway" }, { "name":"04630 JAK-STAT signaling pathway" }, { "name":"04064 NF-kappa B signaling pathway" }, { "name":"04668 TNF signaling pathway" }, { "name":"04066 HIF-1 signaling pathway" }, { "name":"04068 FoxO signaling pathway" }, { "name":"04020 Calcium signaling pathway" }, { "name":"04070 Phosphatidylinositol signaling system" }, { "name":"04072 Phospholipase D signaling pathway" }, { "name":"04071 Sphingolipid signaling pathway" }, { "name":"04024 cAMP signaling pathway" }, { "name":"04022 cGMP-PKG signaling pathway" }, { "name":"04151 PI3K-Akt signaling pathway" }, { "name":"04152 AMPK signaling pathway" }, { "name":"04150 mTOR signaling pathway" }, { "name":"04075 Plant hormone signal transduction" } ] }, { "name":"09133 Signaling molecules and interaction", "children":[ { "name":"04080 Neuroactive ligand-receptor interaction" }, { "name":"04082 Neuroactive ligand signaling" }, { "name":"04081 Hormone signaling" }, { "name":"04060 Cytokine-cytokine receptor interaction" }, { "name":"04061 Viral protein interaction with cytokine and cytokine receptor" }, { "name":"04512 ECM-receptor interaction" }, { "name":"04514 Cell adhesion molecule (CAM) interaction" }, { "name":"04517 IgSF CAM signaling" }, { "name":"04518 Integrin signaling" }, { "name":"04519 Cadherin signaling" } ] } ] }, { "name":"09140 Cellular Processes", "children":[ { "name":"09141 Transport and catabolism", "children":[ { "name":"04144 Endocytosis" }, { "name":"04145 Phagocytosis", "children":[ { "name":"SPSPH_026510 phoA_1; (GenBank) Alkaline phosphatase 4\tK01077 ALP; alkaline phosphatase [EC:3.1.3.1]" }, { "name":"SPSPH_046100 phoA_2; (GenBank) Alkaline phosphatase 4\tK01077 ALP; alkaline phosphatase [EC:3.1.3.1]" } ] }, { "name":"04142 Lysosome biogenesis" }, { "name":"04146 Peroxisome [PATH:ssph04146]", "children":[ { "name":"SPSPH_012840 lcfB; (GenBank) Long-chain-fatty-acid--CoA ligase\tK01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]" }, { "name":"SPSPH_039240 nudC_3; (GenBank) NADH pyrophosphatase\tK03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]" }, { "name":"SPSPH_012960 hypothetical protein\tK00624 CRAT; carnitine O-acetyltransferase [EC:2.3.1.7]" }, { "name":"SPSPH_032150 yngG; (GenBank) Hydroxymethylglutaryl-CoA lyase YngG\tK01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]" }, { "name":"SPSPH_011620 katA; (GenBank) Vegetative catalase\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"SPSPH_043550 katE; (GenBank) Catalase HPII\tK03781 katE; catalase [EC:1.11.1.6]" }, { "name":"SPSPH_024030 hypothetical protein\tK04565 SOD1; superoxide dismutase, Cu-Zn family [EC:1.15.1.1]" }, { "name":"SPSPH_029760 sodA; (GenBank) Superoxide dismutase [Mn\/Fe]\tK04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]" } ] }, { "name":"04149 Peroxisome - yeast" }, { "name":"04140 Autophagy - animal" }, { "name":"04138 Autophagy - yeast" }, { "name":"04136 Autophagy - other" }, { "name":"04137 Mitophagy - animal" }, { "name":"04139 Mitophagy - yeast" }, { "name":"04148 Efferocytosis [PATH:ssph04148]", "children":[ { "name":"SPSPH_023410 rocF; (GenBank) Arginase\tK01476 rocF; arginase [EC:3.5.3.1]" }, { "name":"SPSPH_001490 ldc; (GenBank) Lysine\/ornithine decarboxylase\tK01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]" } ] } ] }, { "name":"09143 Cell growth and death", "children":[ { "name":"04110 Cell cycle" }, { "name":"04111 Cell cycle - yeast" }, { "name":"04112 Cell cycle - Caulobacter" }, { "name":"04113 Meiosis - yeast" }, { "name":"04114 Oocyte meiosis" }, { "name":"04210 Apoptosis" }, { "name":"04214 Apoptosis - fly" }, { "name":"04215 Apoptosis - multiple species" }, { "name":"04216 Ferroptosis" }, { "name":"04217 Necroptosis" }, { "name":"04115 p53 signaling pathway" }, { "name":"04218 Cellular senescence" }, { "name":"04156 Integrated stress response (ISR) signaling pathway [PATH:ssph04156]", "children":[ { "name":"SPSPH_022220 htpG; (GenBank) Chaperone protein HtpG\tK04079 HSP90A; molecular chaperone HtpG" }, { "name":"SPSPH_004450 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_004470 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_019110 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_019660 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_019850 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_019870 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_024200 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_024220 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_028390 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_028460 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_044300 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_011000 dnaK2; (GenBank) Chaperone protein dnaK2\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SPSPH_019330 dnaK; (GenBank) Chaperone protein DnaK\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SPSPH_012170 groL_1; (GenBank) 60 kDa chaperonin\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SPSPH_042250 groL_3; (GenBank) 60 kDa chaperonin\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" } ] } ] }, { "name":"09144 Cellular community - eukaryotes", "children":[ { "name":"04510 Focal adhesion" }, { "name":"04520 Adherens junction" }, { "name":"04530 Tight junction" }, { "name":"04540 Gap junction" }, { "name":"04550 Signaling pathways regulating pluripotency of stem cells" } ] }, { "name":"09145 Cellular community - prokaryotes", "children":[ { "name":"02024 Quorum sensing [PATH:ssph02024]", "children":[ { "name":"SPSPH_018220 hfq; (GenBank) RNA-binding protein Hfq\tK03666 hfq; host factor-I protein" }, { "name":"SPSPH_022830 trpE; (GenBank) Anthranilate synthase component 1\tK01657 trpE; anthranilate synthase component I [EC:4.1.3.27]" }, { "name":"SPSPH_022820 pabA_2; (GenBank) Aminodeoxychorismate synthase component 2\tK01658 trpG; anthranilate synthase component II [EC:4.1.3.27]" }, { "name":"SPSPH_002180 walR; (GenBank) Transcriptional regulatory protein WalR\tK07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE" }, { "name":"SPSPH_008310 kdpE; (GenBank) KDP operon transcriptional regulatory protein KdpE\tK07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE" }, { "name":"SPSPH_047290 hypothetical protein\tK20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]" }, { "name":"SPSPH_047320 hypothetical protein\tK20528 trbC; type IV secretion system protein TrbC" }, { "name":"SPSPH_047280 hypothetical protein\tK20529 trbD; type IV secretion system protein TrbD" }, { "name":"SPSPH_047270 virB4; (GenBank) Type IV secretion system protein virB4\tK20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]" }, { "name":"SPSPH_047260 hypothetical protein\tK20266 trbJ; type IV secretion system protein TrbJ" }, { "name":"SPSPH_047240 hypothetical protein\tK07344 trbL; type IV secretion system protein TrbL" }, { "name":"SPSPH_047310 hypothetical protein\tK20531 trbF; type IV secretion system protein TrbF" }, { "name":"SPSPH_047230 hypothetical protein\tK20532 trbG; type IV secretion system protein TrbG" }, { "name":"SPSPH_047300 hypothetical protein\tK20533 trbI; type IV secretion system protein TrbI" }, { "name":"SPSPH_002480 braC_1; (GenBank) Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SPSPH_010170 braC_2; (GenBank) Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SPSPH_021990 Leu\/Ile\/Val-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SPSPH_038570 livK_1; (GenBank) Leucine-specific-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SPSPH_046340 livK_2; (GenBank) Leucine-specific-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SPSPH_046350 braC_3; (GenBank) Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SPSPH_046330 livH; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"SPSPH_046320 hypothetical protein\tK01998 livM; branched-chain amino acid transport system permease protein" }, { "name":"SPSPH_046310 lptB_2; (GenBank) Lipopolysaccharide export system ATP-binding protein LptB\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"SPSPH_046300 livF; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"SPSPH_012840 lcfB; (GenBank) Long-chain-fatty-acid--CoA ligase\tK01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]" }, { "name":"SPSPH_002210 glxR; (GenBank) CRP-like cAMP-activated global transcriptional regulator\tK10914 crp; CRP\/FNR family transcriptional regulator, cyclic AMP receptor protein" }, { "name":"SPSPH_009810 crp_1; (GenBank) CRP-like cAMP-activated global transcriptional regulator\tK10914 crp; CRP\/FNR family transcriptional regulator, cyclic AMP receptor protein" }, { "name":"SPSPH_034130 crp_2; (GenBank) cAMP-activated global transcriptional regulator CRP\tK10914 crp; CRP\/FNR family transcriptional regulator, cyclic AMP receptor protein" }, { "name":"SPSPH_021570 ribD; (GenBank) Riboflavin biosynthesis protein RibD\tK11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase \/ 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]" }, { "name":"SPSPH_019800 hypothetical protein\tK09936 TC.BAT2; bacterial\/archaeal transporter family-2 protein" }, { "name":"SPSPH_036620 oppF_2; (GenBank) Oligopeptide transport ATP-binding protein OppF\tK10823 oppF; oligopeptide transport system ATP-binding protein" }, { "name":"SPSPH_006530 appA_1; (GenBank) Oligopeptide-binding protein AppA\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"SPSPH_022470 appA_2; (GenBank) Oligopeptide-binding protein AppA\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"SPSPH_025250 appA_3; (GenBank) Oligopeptide-binding protein AppA\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"SPSPH_036410 appA_4; (GenBank) Oligopeptide-binding protein AppA\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"SPSPH_036470 dppA; (GenBank) Periplasmic dipeptide transport protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"SPSPH_036610 appA_5; (GenBank) Oligopeptide-binding protein AppA\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"SPSPH_003000 nikB_1; (GenBank) Nickel transport system permease protein NikB\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"SPSPH_006540 dppB_1; (GenBank) Dipeptide transport system permease protein DppB\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"SPSPH_025240 gsiC_1; (GenBank) Glutathione transport system permease protein GsiC\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"SPSPH_036400 dppB_2; (GenBank) Dipeptide transport system permease protein DppB\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"SPSPH_036480 gsiC_2; (GenBank) Glutathione transport system permease protein GsiC\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"SPSPH_006550 dppC_1; (GenBank) Dipeptide transport system permease protein DppC\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"SPSPH_025230 dppC_2; (GenBank) Dipeptide transport system permease protein DppC\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"SPSPH_036390 oppC; (GenBank) Oligopeptide transport system permease protein OppC\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"SPSPH_036490 gsiD_1; (GenBank) Glutathione transport system permease protein GsiD\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"SPSPH_036640 gsiD_2; (GenBank) Glutathione transport system permease protein GsiD\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"SPSPH_003020 oppD_1; (GenBank) Oligopeptide transport ATP-binding protein OppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_006560 oppD_2; (GenBank) Oligopeptide transport ATP-binding protein OppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_025220 putative ABC transporter ATP-binding protein\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_036100 cntD_2; (GenBank) Metal-staphylopine import system ATP-binding protein CntD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_036380 ddpD; (GenBank) putative D,D-dipeptide transport ATP-binding protein DdpD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_036500 gsiA_2; (GenBank) Glutathione import ATP-binding protein GsiA\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_036630 oppD_3; (GenBank) Oligopeptide transport ATP-binding protein OppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_003030 oppF_1; (GenBank) Oligopeptide transport ATP-binding protein OppF\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_006570 nikE_1; (GenBank) Nickel import system ATP-binding protein NikE\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_025210 nikE_2; (GenBank) Nickel import system ATP-binding protein NikE\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_046640 yidC2; (GenBank) Membrane protein insertase YidC 2\tK03217 yidC; YidC\/Oxa1 family membrane protein insertase" }, { "name":"SPSPH_004510 secE; (GenBank) Protein translocase subunit SecE\tK03073 secE; preprotein translocase subunit SecE" }, { "name":"SPSPH_030240 secG; (GenBank) putative protein-export membrane protein SecG\tK03075 secG; preprotein translocase subunit SecG" }, { "name":"SPSPH_004850 secY; (GenBank) Protein translocase subunit SecY\tK03076 secY; preprotein translocase subunit SecY" }, { "name":"SPSPH_020310 hypothetical protein\tK03210 yajC; preprotein translocase subunit YajC" }, { "name":"SPSPH_030810 secA; (GenBank) Protein translocase subunit SecA\tK03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]" }, { "name":"SPSPH_016860 ftsY; (GenBank) Signal recognition particle receptor FtsY\tK03110 ftsY; fused signal recognition particle receptor" }, { "name":"SPSPH_016880 ffh; (GenBank) Signal recognition particle protein\tK03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]" }, { "name":"SPSPH_002660 cheB_1; (GenBank) Protein-glutamate methylesterase\/protein-glutamine glutaminase\tK02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F" }, { "name":"SPSPH_018230 spo0A; (GenBank) Stage 0 sporulation protein A\tK07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A" }, { "name":"SPSPH_003570 hypothetical protein\tK01114 plc; phospholipase C [EC:3.1.4.3]" } ] }, { "name":"05111 Biofilm formation - Vibrio cholerae" }, { "name":"02025 Biofilm formation - Pseudomonas aeruginosa" }, { "name":"02026 Biofilm formation - Escherichia coli" } ] }, { "name":"09142 Cell motility", "children":[ { "name":"02030 Bacterial chemotaxis [PATH:ssph02030]", "children":[ { "name":"SPSPH_000130 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_001180 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_004190 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_005490 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_006110 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_007180 yoaH; (GenBank) Putative methyl-accepting chemotaxis protein YoaH\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_007240 mcpA_1; (GenBank) Methyl-accepting chemotaxis protein McpA\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_007570 mcpB_1; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_009230 mcpB_2; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_009360 mcpB_3; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_009630 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_011020 mcpB_4; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_011340 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_022770 mcpA_2; (GenBank) Methyl-accepting chemotaxis protein McpA\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_025200 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_026640 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_026890 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_027600 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_031690 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_034730 pctB; (GenBank) Methyl-accepting chemotaxis protein PctB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_035030 mcpB_5; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_035550 mcpB_6; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_036360 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_037490 mcpB_7; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_037820 mcpB_8; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_037880 mcpB_9; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_038060 mcpB_10; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_039280 mcpB_11; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_039300 mcp4; (GenBank) Methyl-accepting chemotaxis protein 4\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_039940 mcpA_4; (GenBank) Methyl-accepting chemotaxis protein McpA\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_041880 mcpB_12; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_042110 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_042280 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_042900 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_017480 cheA; (GenBank) Chemotaxis protein CheA\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SPSPH_034270 rcsC_7; (GenBank) Sensor histidine kinase RcsC\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SPSPH_034720 rcsC_8; (GenBank) Sensor histidine kinase RcsC\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SPSPH_037440 hypothetical protein\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SPSPH_001920 cheW_1; (GenBank) Chemotaxis protein CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SPSPH_017490 cheW_2; (GenBank) Chemotaxis protein CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SPSPH_017370 cheY_1; (GenBank) Chemotaxis protein CheY\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SPSPH_022280 cheY_2; (GenBank) Chemotaxis protein CheY\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SPSPH_023480 cheB_6; (GenBank) Protein-glutamate methylesterase\/protein-glutamine glutaminase\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SPSPH_027230 cheY_3; (GenBank) Chemotaxis protein CheY\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SPSPH_017500 cheC; (GenBank) CheY-P phosphatase CheC\tK03410 cheC; chemotaxis protein CheC" }, { "name":"SPSPH_009890 hypothetical protein\tK03409 cheX; chemotaxis protein CheX" }, { "name":"SPSPH_017470 cheB_5; (GenBank) Protein-glutamate methylesterase\/protein-glutamine glutaminase\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SPSPH_046610 cheV; (GenBank) Chemotaxis protein CheV\tK03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV" }, { "name":"SPSPH_017510 cheD; (GenBank) Chemoreceptor glutamine deamidase CheD\tK03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]" }, { "name":"SPSPH_001050 cheR; (GenBank) Chemotaxis protein methyltransferase\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"SPSPH_017230 fliG; (GenBank) Flagellar motor switch protein FliG\tK02410 fliG; flagellar motor switch protein FliG" }, { "name":"SPSPH_017350 fliM; (GenBank) Flagellar motor switch protein FliM\tK02416 fliM; flagellar motor switch protein FliM" }, { "name":"SPSPH_017360 hypothetical protein\tK02417 fliN; flagellar motor switch protein FliN" }, { "name":"SPSPH_011990 pomA; (GenBank) Chemotaxis protein PomA\tK02556 motA; chemotaxis protein MotA" }, { "name":"SPSPH_012000 motB; (GenBank) Motility protein B\tK02557 motB; chemotaxis protein MotB" } ] }, { "name":"02040 Flagellar assembly [PATH:ssph02040]", "children":[ { "name":"SPSPH_017210 fliE; (GenBank) Flagellar hook-basal body complex protein FliE\tK02408 fliE; flagellar hook-basal body complex protein FliE" }, { "name":"SPSPH_017220 hypothetical protein\tK02409 fliF; flagellar M-ring protein FliF" }, { "name":"SPSPH_017230 fliG; (GenBank) Flagellar motor switch protein FliG\tK02410 fliG; flagellar motor switch protein FliG" }, { "name":"SPSPH_017240 yscL; (GenBank) Yop proteins translocation protein L\tK02411 fliH; flagellar assembly protein FliH" }, { "name":"SPSPH_017250 yscN; (GenBank) putative ATP synthase YscN\tK02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]" }, { "name":"SPSPH_017260 hypothetical protein\tK02413 fliJ; flagellar protein FliJ" }, { "name":"SPSPH_017290 hypothetical protein\tK02414 fliK; flagellar hook-length control protein FliK" }, { "name":"SPSPH_017340 hypothetical protein\tK02415 fliL; flagellar protein FliL" }, { "name":"SPSPH_017350 fliM; (GenBank) Flagellar motor switch protein FliM\tK02416 fliM; flagellar motor switch protein FliM" }, { "name":"SPSPH_017360 hypothetical protein\tK02417 fliN; flagellar motor switch protein FliN" }, { "name":"SPSPH_017390 fliP; (GenBank) Flagellar biosynthetic protein FliP\tK02419 fliP; flagellar biosynthesis protein FliP" }, { "name":"SPSPH_017400 fliQ; (GenBank) Flagellar biosynthetic protein FliQ\tK02420 fliQ; flagellar biosynthesis protein FliQ" }, { "name":"SPSPH_017410 fliR; (GenBank) Flagellar biosynthetic protein FliR\tK02421 fliR; flagellar biosynthesis protein FliR" }, { "name":"SPSPH_017430 flhA; (GenBank) Flagellar biosynthesis protein FlhA\tK02400 flhA; flagellar biosynthesis protein FlhA" }, { "name":"SPSPH_017420 flhB_2; (GenBank) Flagellar biosynthetic protein FlhB\tK02401 flhB; flagellar biosynthesis protein FlhB" }, { "name":"SPSPH_033630 hypothetical protein\tK02386 flgA; flagellar basal body P-ring formation protein FlgA" }, { "name":"SPSPH_017190 flgB; (GenBank) Flagellar basal body rod protein FlgB\tK02387 flgB; flagellar basal-body rod protein FlgB" }, { "name":"SPSPH_017200 flgC; (GenBank) Flagellar basal-body rod protein FlgC\tK02388 flgC; flagellar basal-body rod protein FlgC" }, { "name":"SPSPH_005810 hypothetical protein\tK02389 flgD; flagellar basal-body rod modification protein FlgD" }, { "name":"SPSPH_017300 hypothetical protein\tK02389 flgD; flagellar basal-body rod modification protein FlgD" }, { "name":"SPSPH_005820 hypothetical protein\tK02390 flgE; flagellar hook protein FlgE" }, { "name":"SPSPH_017320 hypothetical protein\tK02390 flgE; flagellar hook protein FlgE" }, { "name":"SPSPH_033650 flgG_2; (GenBank) Flagellar basal-body rod protein FlgG\tK02391 flgF; flagellar basal-body rod protein FlgF" }, { "name":"SPSPH_033640 flgG_1; (GenBank) Flagellar basal-body rod protein FlgG\tK02392 flgG; flagellar basal-body rod protein FlgG" }, { "name":"SPSPH_033620 flgH; (GenBank) Flagellar L-ring protein\tK02393 flgH; flagellar L-ring protein FlgH" }, { "name":"SPSPH_033610 flgI; (GenBank) Flagellar P-ring protein\tK02394 flgI; flagellar P-ring protein FlgI" }, { "name":"SPSPH_033600 hypothetical protein\tK02395 flgJ; peptidoglycan hydrolase FlgJ" }, { "name":"SPSPH_005830 hypothetical protein\tK02396 flgK; flagellar hook-associated protein 1" }, { "name":"SPSPH_005840 flgK_1; (GenBank) Flagellar hook-associated protein 1\tK02396 flgK; flagellar hook-associated protein 1" }, { "name":"SPSPH_032630 flgK_2; (GenBank) Flagellar hook-associated protein 1\tK02396 flgK; flagellar hook-associated protein 1" }, { "name":"SPSPH_005850 hypothetical protein\tK02397 flgL; flagellar hook-associated protein 3 FlgL" }, { "name":"SPSPH_032620 hypothetical protein\tK02397 flgL; flagellar hook-associated protein 3 FlgL" }, { "name":"SPSPH_005880 fliC; (GenBank) A-type flagellin\tK02406 fliC; flagellin" }, { "name":"SPSPH_032360 hypothetical protein\tK02406 fliC; flagellin" }, { "name":"SPSPH_032550 hypothetical protein\tK02406 fliC; flagellin" }, { "name":"SPSPH_005860 hypothetical protein\tK02407 fliD; flagellar hook-associated protein 2" }, { "name":"SPSPH_031320 hypothetical protein\tK02407 fliD; flagellar hook-associated protein 2" }, { "name":"SPSPH_032350 fliD; (GenBank) Flagellar hook-associated protein 2\tK02407 fliD; flagellar hook-associated protein 2" }, { "name":"SPSPH_032570 fliS; (GenBank) Flagellar secretion chaperone FliS\tK02422 fliS; flagellar secretion chaperone FliS" }, { "name":"SPSPH_011990 pomA; (GenBank) Chemotaxis protein PomA\tK02556 motA; chemotaxis protein MotA" }, { "name":"SPSPH_012000 motB; (GenBank) Motility protein B\tK02557 motB; chemotaxis protein MotB" }, { "name":"SPSPH_032650 hypothetical protein\tK02398 flgM; negative regulator of flagellin synthesis FlgM" }, { "name":"SPSPH_019640 sigA_1; (GenBank) RNA polymerase sigma factor SigA\tK03086 rpoD; RNA polymerase primary sigma factor" }, { "name":"SPSPH_043200 sigA_2; (GenBank) RNA polymerase sigma factor SigA\tK03086 rpoD; RNA polymerase primary sigma factor" }, { "name":"SPSPH_030410 rpoN; (GenBank) RNA polymerase sigma-54 factor\tK03092 rpoN; RNA polymerase sigma-54 factor" }, { "name":"SPSPH_017530 sigD_1; (GenBank) RNA polymerase sigma-D factor\tK02405 fliA; RNA polymerase sigma factor FliA" } ] }, { "name":"04814 Motor proteins" }, { "name":"04820 Cytoskeleton in muscle cells", "children":[ { "name":"SPSPH_030260 eno; (GenBank) Enolase\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]" } ] }, { "name":"04810 Regulation of actin cytoskeleton" } ] } ] }, { "name":"09150 Organismal Systems", "children":[ { "name":"09151 Immune system", "children":[ { "name":"04640 Hematopoietic cell lineage" }, { "name":"04610 Complement and coagulation cascades" }, { "name":"04611 Platelet activation" }, { "name":"04613 Neutrophil extracellular trap formation" }, { "name":"04620 Toll-like receptor signaling pathway" }, { "name":"04624 Toll and Imd signaling pathway" }, { "name":"04621 NOD-like receptor signaling pathway" }, { "name":"04622 RIG-I-like receptor signaling pathway" }, { "name":"04623 Cytosolic DNA-sensing pathway" }, { "name":"04625 C-type lectin receptor signaling pathway" }, { "name":"04650 Natural killer cell mediated cytotoxicity" }, { "name":"04612 Antigen processing and presentation" }, { "name":"04660 T cell receptor signaling pathway" }, { "name":"04658 Th1 and Th2 cell differentiation" }, { "name":"04659 Th17 cell differentiation" }, { "name":"04657 IL-17 signaling pathway" }, { "name":"04662 B cell receptor signaling pathway" }, { "name":"04664 Fc epsilon RI signaling pathway" }, { "name":"04666 Fc gamma R-mediated phagosome formation" }, { "name":"04670 Leukocyte transendothelial migration" }, { "name":"04672 Intestinal immune network for IgA production" }, { "name":"04062 Chemokine signaling pathway" } ] }, { "name":"09152 Endocrine system", "children":[ { "name":"04911 Insulin secretion" }, { "name":"04910 Insulin signaling pathway" }, { "name":"04922 Glucagon signaling pathway" }, { "name":"04923 Regulation of lipolysis in adipocytes" }, { "name":"04920 Adipocytokine signaling pathway" }, { "name":"03320 PPAR signaling pathway" }, { "name":"04929 GnRH secretion" }, { "name":"04912 GnRH signaling pathway" }, { "name":"04913 Ovarian steroidogenesis" }, { "name":"04915 Estrogen signaling pathway" }, { "name":"04914 Progesterone-mediated oocyte maturation" }, { "name":"04917 Prolactin signaling pathway" }, { "name":"04921 Oxytocin signaling pathway" }, { "name":"04926 Relaxin signaling pathway" }, { "name":"04935 Growth hormone synthesis, secretion and action" }, { "name":"04918 Thyroid hormone synthesis" }, { "name":"04919 Thyroid hormone signaling pathway" }, { "name":"04928 Parathyroid hormone synthesis, secretion and action" }, { "name":"04916 Melanogenesis" }, { "name":"04924 Renin secretion" }, { "name":"04614 Renin-angiotensin system" }, { "name":"04925 Aldosterone synthesis and secretion" }, { "name":"04927 Cortisol synthesis and secretion" } ] }, { "name":"09153 Circulatory system", "children":[ { "name":"04260 Cardiac muscle contraction" }, { "name":"04261 Adrenergic signaling in cardiomyocytes" }, { "name":"04270 Vascular smooth muscle contraction" } ] }, { "name":"09154 Digestive system", "children":[ { "name":"04970 Salivary secretion" }, { "name":"04971 Gastric acid secretion" }, { "name":"04972 Pancreatic secretion" }, { "name":"04976 Bile secretion" }, { "name":"04973 Carbohydrate digestion and absorption" }, { "name":"04974 Protein digestion and absorption" }, { "name":"04975 Fat digestion and absorption" }, { "name":"04979 Cholesterol metabolism" }, { "name":"04977 Vitamin digestion and absorption" }, { "name":"04981 Folate transport and metabolism [PATH:ssph04981]", "children":[ { "name":"SPSPH_020320 yqgN; (GenBank) putative protein YqgN\tK01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]" }, { "name":"SPSPH_033880 glyA_1; (GenBank) Serine hydroxymethyltransferase\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" }, { "name":"SPSPH_044630 glyA_2; (GenBank) Serine hydroxymethyltransferase\tK00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]" }, { "name":"SPSPH_006220 acsE_2; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_008920 acsE_3; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_027010 glmS_4; (GenBank) Glutamate mutase sigma subunit\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_027020 acsE_5; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_029030 acsE_6; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_029800 acsE_7; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_029920 methyltetrahydrofolate cobalamin methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_031020 acsE_9; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_031250 acsE_10; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_036220 metH_13; (GenBank) Methionine synthase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_037550 acsE_12; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_038100 acsE_13; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_046520 metH_18; (GenBank) Methionine synthase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" } ] }, { "name":"04980 Cobalamin transport and metabolism [PATH:ssph04980]", "children":[ { "name":"SPSPH_022090 yvqK; (GenBank) Corrinoid adenosyltransferase\tK00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]" }, { "name":"SPSPH_014520 putative GTPase\tK07588 MMAA; GTPase [EC:3.6.5.-]" }, { "name":"SPSPH_006220 acsE_2; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_008920 acsE_3; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_027010 glmS_4; (GenBank) Glutamate mutase sigma subunit\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_027020 acsE_5; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_029030 acsE_6; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_029800 acsE_7; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_029920 methyltetrahydrofolate cobalamin methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_031020 acsE_9; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_031250 acsE_10; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_036220 metH_13; (GenBank) Methionine synthase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_037550 acsE_12; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_038100 acsE_13; (GenBank) 5-methyltetrahydrofolate:corrinoid\/iron-sulfur protein co-methyltransferase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" }, { "name":"SPSPH_046520 metH_18; (GenBank) Methionine synthase\tK00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]" } ] }, { "name":"04978 Mineral absorption" } ] }, { "name":"09155 Excretory system", "children":[ { "name":"04962 Vasopressin-regulated water reabsorption" }, { "name":"04960 Aldosterone-regulated sodium reabsorption" }, { "name":"04961 Endocrine and other factor-regulated calcium reabsorption" }, { "name":"04964 Proximal tubule bicarbonate reclamation" }, { "name":"04966 Collecting duct acid secretion" } ] }, { "name":"09156 Nervous system", "children":[ { "name":"04724 Glutamatergic synapse" }, { "name":"04727 GABAergic synapse" }, { "name":"04725 Cholinergic synapse" }, { "name":"04728 Dopaminergic synapse" }, { "name":"04726 Serotonergic synapse" }, { "name":"04720 Long-term potentiation" }, { "name":"04730 Long-term depression" }, { "name":"04723 Retrograde endocannabinoid signaling" }, { "name":"04721 Synaptic vesicle cycle" }, { "name":"04722 Neurotrophin signaling pathway" } ] }, { "name":"09157 Sensory system", "children":[ { "name":"04744 Phototransduction" }, { "name":"04745 Phototransduction - fly" }, { "name":"04740 Olfactory transduction" }, { "name":"04742 Taste transduction" }, { "name":"04750 Inflammatory mediator regulation of TRP channels" } ] }, { "name":"09158 Development and regeneration", "children":[ { "name":"04320 Dorso-ventral axis formation" }, { "name":"04360 Axon guidance" }, { "name":"04361 Axon regeneration" }, { "name":"04380 Osteoclast differentiation" }, { "name":"04382 Cornified envelope formation", "children":[ { "name":"SPSPH_003150 hutH_1; (GenBank) Histidine ammonia-lyase\tK01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]" }, { "name":"SPSPH_010400 hutH_2; (GenBank) Histidine ammonia-lyase\tK01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]" }, { "name":"SPSPH_010410 hutH_3; (GenBank) Histidine ammonia-lyase\tK01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]" }, { "name":"SPSPH_037900 hutH_4; (GenBank) Histidine ammonia-lyase\tK01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]" } ] } ] }, { "name":"09149 Aging", "children":[ { "name":"04211 Longevity regulating pathway" }, { "name":"04212 Longevity regulating pathway - worm" }, { "name":"04213 Longevity regulating pathway - multiple species" } ] }, { "name":"09159 Environmental adaptation", "children":[ { "name":"04710 Circadian rhythm" }, { "name":"04713 Circadian entrainment" }, { "name":"04711 Circadian rhythm - fly" }, { "name":"04712 Circadian rhythm - plant" }, { "name":"04714 Thermogenesis" }, { "name":"04626 Plant-pathogen interaction" } ] } ] }, { "name":"09160 Human Diseases", "children":[ { "name":"09161 Cancer: overview", "children":[ { "name":"05200 Pathways in cancer" }, { "name":"05202 Transcriptional misregulation in cancer" }, { "name":"05206 MicroRNAs in cancer" }, { "name":"05205 Proteoglycans in cancer" }, { "name":"05204 Chemical carcinogenesis - DNA adducts" }, { "name":"05207 Chemical carcinogenesis - receptor activation" }, { "name":"05208 Chemical carcinogenesis - reactive oxygen species" }, { "name":"05203 Viral carcinogenesis" }, { "name":"05230 Central carbon metabolism in cancer" }, { "name":"05231 Choline metabolism in cancer" }, { "name":"05235 PD-L1 expression and PD-1 checkpoint pathway in cancer" } ] }, { "name":"09162 Cancer: specific types", "children":[ { "name":"05210 Colorectal cancer" }, { "name":"05212 Pancreatic cancer" }, { "name":"05225 Hepatocellular carcinoma" }, { "name":"05226 Gastric cancer" }, { "name":"05214 Glioma" }, { "name":"05216 Thyroid cancer" }, { "name":"05221 Acute myeloid leukemia" }, { "name":"05220 Chronic myeloid leukemia" }, { "name":"05217 Basal cell carcinoma" }, { "name":"05218 Melanoma" }, { "name":"05211 Renal cell carcinoma" }, { "name":"05219 Bladder cancer" }, { "name":"05215 Prostate cancer" }, { "name":"05213 Endometrial cancer" }, { "name":"05224 Breast cancer" }, { "name":"05222 Small cell lung cancer" }, { "name":"05223 Non-small cell lung cancer" } ] }, { "name":"09172 Infectious disease: viral", "children":[ { "name":"05166 Human T-cell leukemia virus 1 infection" }, { "name":"05170 Human immunodeficiency virus 1 infection" }, { "name":"05161 Hepatitis B" }, { "name":"05160 Hepatitis C" }, { "name":"05171 Coronavirus disease" }, { "name":"05164 Influenza A" }, { "name":"05162 Measles" }, { "name":"05168 Herpes simplex virus 1 infection" }, { "name":"05163 Human cytomegalovirus infection" }, { "name":"05167 Kaposi sarcoma-associated herpesvirus infection" }, { "name":"05169 Epstein-Barr virus infection" }, { "name":"05165 Human papillomavirus infection" } ] }, { "name":"09171 Infectious disease: bacterial", "children":[ { "name":"05110 Vibrio cholerae infection" }, { "name":"05120 Epithelial cell signaling in Helicobacter pylori infection" }, { "name":"05130 Pathogenic Escherichia coli infection" }, { "name":"05132 Salmonella infection" }, { "name":"05131 Shigellosis" }, { "name":"05135 Yersinia infection" }, { "name":"05133 Pertussis" }, { "name":"05134 Legionellosis" }, { "name":"05150 Staphylococcus aureus infection" }, { "name":"05152 Tuberculosis" }, { "name":"05100 Bacterial invasion of epithelial cells" } ] }, { "name":"09174 Infectious disease: parasitic", "children":[ { "name":"05146 Amoebiasis" }, { "name":"05144 Malaria" }, { "name":"05145 Toxoplasmosis" }, { "name":"05140 Leishmaniasis" }, { "name":"05142 Chagas disease" }, { "name":"05143 African trypanosomiasis" } ] }, { "name":"09163 Immune disease", "children":[ { "name":"05310 Asthma" }, { "name":"05322 Systemic lupus erythematosus" }, { "name":"05323 Rheumatoid arthritis" }, { "name":"05320 Autoimmune thyroid disease" }, { "name":"05321 Inflammatory bowel disease" }, { "name":"05330 Allograft rejection" }, { "name":"05332 Graft-versus-host disease" }, { "name":"05340 Primary immunodeficiency" } ] }, { "name":"09164 Neurodegenerative disease", "children":[ { "name":"05010 Alzheimer disease" }, { "name":"05012 Parkinson disease" }, { "name":"05014 Amyotrophic lateral sclerosis" }, { "name":"05016 Huntington disease" }, { "name":"05017 Spinocerebellar ataxia" }, { "name":"05020 Prion disease" }, { "name":"05022 Pathways of neurodegeneration - multiple diseases" } ] }, { "name":"09165 Substance dependence", "children":[ { "name":"05030 Cocaine addiction" }, { "name":"05031 Amphetamine addiction" }, { "name":"05032 Morphine addiction" }, { "name":"05033 Nicotine addiction" }, { "name":"05034 Alcoholism" } ] }, { "name":"09166 Cardiovascular disease", "children":[ { "name":"05417 Lipid and atherosclerosis" }, { "name":"05418 Fluid shear stress and atherosclerosis" }, { "name":"05410 Hypertrophic cardiomyopathy" }, { "name":"05412 Arrhythmogenic right ventricular cardiomyopathy" }, { "name":"05414 Dilated cardiomyopathy" }, { "name":"05415 Diabetic cardiomyopathy" }, { "name":"05416 Viral myocarditis" } ] }, { "name":"09167 Endocrine and metabolic disease", "children":[ { "name":"04930 Type II diabetes mellitus" }, { "name":"04940 Type I diabetes mellitus" }, { "name":"04950 Maturity onset diabetes of the young" }, { "name":"04936 Alcoholic liver disease" }, { "name":"04932 Non-alcoholic fatty liver disease" }, { "name":"04931 Insulin resistance" }, { "name":"04933 AGE-RAGE signaling pathway in diabetic complications" }, { "name":"04934 Cushing syndrome" } ] }, { "name":"09175 Drug resistance: antimicrobial", "children":[ { "name":"01501 beta-Lactam resistance [PATH:ssph01501]", "children":[ { "name":"SPSPH_036620 oppF_2; (GenBank) Oligopeptide transport ATP-binding protein OppF\tK10823 oppF; oligopeptide transport system ATP-binding protein" }, { "name":"SPSPH_026580 blaR1; (GenBank) Regulatory protein BlaR1\tK02172 blaR1; bla regulator protein blaR1" }, { "name":"SPSPH_041740 rtcB_2; (GenBank) RNA-splicing ligase RtcB\tK18148 rtcB; release factor H-coupled RctB family protein" }, { "name":"SPSPH_006710 mdtA_1; (GenBank) Multidrug resistance protein MdtA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_008160 acrE; (GenBank) Multidrug export protein AcrE\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_013320 bepF; (GenBank) Efflux pump periplasmic linker BepF\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_015880 mdtA_3; (GenBank) Multidrug resistance protein MdtA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_027730 mdtA_5; (GenBank) Multidrug resistance protein MdtA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_039660 acrA; (GenBank) Multidrug efflux pump subunit AcrA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_042800 mdtA_6; (GenBank) Multidrug resistance protein MdtA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_006720 swrC; (GenBank) Swarming motility protein SwrC\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_008170 bepE_1; (GenBank) Efflux pump membrane transporter BepE\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_013310 bepE_2; (GenBank) Efflux pump membrane transporter BepE\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_015890 mdtC_1; (GenBank) Multidrug resistance protein MdtC\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_039670 bepE_3; (GenBank) Efflux pump membrane transporter BepE\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_042790 mdtC_2; (GenBank) Multidrug resistance protein MdtC\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_005700 tolC_2; (GenBank) Outer membrane protein TolC\tK12340 tolC; outer membrane protein" }, { "name":"SPSPH_033510 hypothetical protein\tK12340 tolC; outer membrane protein" }, { "name":"SPSPH_039650 oprM; (GenBank) Outer membrane protein OprM\tK12340 tolC; outer membrane protein" }, { "name":"SPSPH_020110 pbpF; (GenBank) Penicillin-binding protein 1F\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"SPSPH_014770 mrdA_1; (GenBank) Peptidoglycan D,D-transpeptidase MrdA\tK05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]" }, { "name":"SPSPH_041060 mrdA_2; (GenBank) Peptidoglycan D,D-transpeptidase MrdA\tK05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]" } ] }, { "name":"01502 Vancomycin resistance [PATH:ssph01502]", "children":[ { "name":"SPSPH_016460 ddlB; (GenBank) D-alanine--D-alanine ligase B\tK01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]" }, { "name":"SPSPH_001040 alr1; (GenBank) Alanine racemase 1\tK01775 alr; alanine racemase [EC:5.1.1.1]" }, { "name":"SPSPH_016390 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase\tK01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]" }, { "name":"SPSPH_016400 mraY; (GenBank) Phospho-N-acetylmuramoyl-pentapeptide-transferase\tK01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]" }, { "name":"SPSPH_016430 murG; (GenBank) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase\tK02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]" } ] }, { "name":"01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ssph01503]", "children":[ { "name":"SPSPH_005070 hypothetical protein\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SPSPH_012070 hypothetical protein\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SPSPH_017840 hypothetical protein\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SPSPH_024580 hypothetical protein\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SPSPH_028890 amiC; (GenBank) N-acetylmuramoyl-L-alanine amidase AmiC\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SPSPH_044400 lytC_3; (GenBank) N-acetylmuramoyl-L-alanine amidase LytC\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SPSPH_045190 lytC_4; (GenBank) N-acetylmuramoyl-L-alanine amidase LytC\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SPSPH_000120 ykuD; (GenBank) Putative L,D-transpeptidase YkuD\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"SPSPH_019780 hypothetical protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"SPSPH_041320 hypothetical protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"SPSPH_040770 htrA; (GenBank) Putative serine protease HtrA\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SPSPH_006710 mdtA_1; (GenBank) Multidrug resistance protein MdtA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_008160 acrE; (GenBank) Multidrug export protein AcrE\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_013320 bepF; (GenBank) Efflux pump periplasmic linker BepF\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_015880 mdtA_3; (GenBank) Multidrug resistance protein MdtA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_027730 mdtA_5; (GenBank) Multidrug resistance protein MdtA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_039660 acrA; (GenBank) Multidrug efflux pump subunit AcrA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_042800 mdtA_6; (GenBank) Multidrug resistance protein MdtA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_006720 swrC; (GenBank) Swarming motility protein SwrC\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_008170 bepE_1; (GenBank) Efflux pump membrane transporter BepE\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_013310 bepE_2; (GenBank) Efflux pump membrane transporter BepE\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_015890 mdtC_1; (GenBank) Multidrug resistance protein MdtC\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_039670 bepE_3; (GenBank) Efflux pump membrane transporter BepE\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_042790 mdtC_2; (GenBank) Multidrug resistance protein MdtC\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_005700 tolC_2; (GenBank) Outer membrane protein TolC\tK12340 tolC; outer membrane protein" }, { "name":"SPSPH_033510 hypothetical protein\tK12340 tolC; outer membrane protein" }, { "name":"SPSPH_039650 oprM; (GenBank) Outer membrane protein OprM\tK12340 tolC; outer membrane protein" }, { "name":"SPSPH_033350 lpxA; (GenBank) Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase\tK00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]" } ] } ] }, { "name":"09176 Drug resistance: antineoplastic", "children":[ { "name":"01521 EGFR tyrosine kinase inhibitor resistance" }, { "name":"01524 Platinum drug resistance" }, { "name":"01523 Antifolate resistance" }, { "name":"01522 Endocrine resistance" } ] } ] }, { "name":"09180 Brite Hierarchies", "children":[ { "name":"09181 Protein families: metabolism", "children":[ { "name":"01000 Enzymes [BR:ssph01000]" }, { "name":"01001 Protein kinases [BR:ssph01001]", "children":[ { "name":"SPSPH_021600 prkC; (GenBank) Serine\/threonine-protein kinase PrkC\tK12132 prkC; eukaryotic-like serine\/threonine-protein kinase [EC:2.7.11.1]" }, { "name":"SPSPH_014290 spoIIAB_2; (GenBank) Anti-sigma F factor\tK17752 rsbT; serine\/threonine-protein kinase RsbT [EC:2.7.11.1]" }, { "name":"SPSPH_003500 phoR; (GenBank) Alkaline phosphatase synthesis sensor protein PhoR\tK07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]" }, { "name":"SPSPH_008300 kdpD; (GenBank) Sensor protein KdpD\tK07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]" }, { "name":"SPSPH_001620 degS; (GenBank) Signal transduction histidine-protein kinase\/phosphatase DegS\tK07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]" }, { "name":"SPSPH_039380 ypdA_2; (GenBank) Sensor histidine kinase YpdA\tK07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]" }, { "name":"SPSPH_002310 btsS; (GenBank) Sensor histidine kinase BtsS\tK02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]" }, { "name":"SPSPH_018910 ypdA_1; (GenBank) Sensor histidine kinase YpdA\tK02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]" }, { "name":"SPSPH_045930 ypdA_3; (GenBank) Sensor histidine kinase YpdA\tK02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]" }, { "name":"SPSPH_017480 cheA; (GenBank) Chemotaxis protein CheA\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SPSPH_034270 rcsC_7; (GenBank) Sensor histidine kinase RcsC\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SPSPH_034720 rcsC_8; (GenBank) Sensor histidine kinase RcsC\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SPSPH_037440 hypothetical protein\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SPSPH_041110 glnK; (GenBank) Sensor histidine kinase GlnK\tK07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]" }, { "name":"SPSPH_029350 hypothetical protein\tK07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]" }, { "name":"SPSPH_012140 pdtaS; (GenBank) putative sensor histidine kinase pdtaS\tK00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]" } ] }, { "name":"01009 Protein phosphatases and associated proteins [BR:ssph01009]", "children":[ { "name":"SPSPH_021270 ahcY; (GenBank) Adenosylhomocysteinase\tK01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]" }, { "name":"SPSPH_007580 pfkA; (GenBank) ATP-dependent 6-phosphofructokinase\tK00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]" }, { "name":"SPSPH_022220 htpG; (GenBank) Chaperone protein HtpG\tK04079 HSP90A; molecular chaperone HtpG" }, { "name":"SPSPH_021630 prpC; (GenBank) Protein phosphatase PrpC\tK20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]" } ] }, { "name":"01002 Peptidases and inhibitors [BR:ssph01002]", "children":[ { "name":"SPSPH_021870 lspA; (GenBank) Lipoprotein signal peptidase\tK03101 lspA; signal peptidase II [EC:3.4.23.36]" }, { "name":"SPSPH_015740 comC; (GenBank) Type 4 prepilin-like proteins leader peptide-processing enzyme\tK02654 pilD; leader peptidase (prepilin peptidase) \/ N-methyltransferase [EC:3.4.23.43 2.1.1.-]" }, { "name":"SPSPH_019250 gpr; (GenBank) Germination protease\tK06012 gpr; spore protease [EC:3.4.24.78]" }, { "name":"SPSPH_015450 hybD; (GenBank) Hydrogenase 2 maturation protease\tK03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]" }, { "name":"SPSPH_016520 spoIIGA; (GenBank) Sporulation sigma-E factor-processing peptidase\tK06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]" }, { "name":"SPSPH_012200 guaA; (GenBank) GMP synthase [glutamine-hydrolyzing]\tK01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]" }, { "name":"SPSPH_030220 Putative glutamine amidotransferase\tK07010 K07010; putative glutamine amidotransferase" }, { "name":"SPSPH_012900 purF; (GenBank) Amidophosphoribosyltransferase\tK00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]" }, { "name":"SPSPH_046370 hypothetical protein\tK00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]" }, { "name":"SPSPH_005230 glmS_1; (GenBank) Glutamine--fructose-6-phosphate aminotransferase [isomerizing]\tK00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]" }, { "name":"SPSPH_007610 asnO; (GenBank) Asparagine synthetase [glutamine-hydrolyzing] 3\tK01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]" }, { "name":"SPSPH_032960 asnB; (GenBank) Putative asparagine synthetase [glutamine-hydrolyzing]\tK01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]" }, { "name":"SPSPH_012830 yhbO; (GenBank) Protein\/nucleic acid deglycase 2\tK05520 yhbO; deglycase [EC:3.5.1.124]" }, { "name":"SPSPH_000120 ykuD; (GenBank) Putative L,D-transpeptidase YkuD\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"SPSPH_019780 hypothetical protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"SPSPH_041320 hypothetical protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"SPSPH_026670 hypothetical protein\tK07052 K07052; CAAX protease family protein" }, { "name":"SPSPH_024590 pepF1; (GenBank) Oligoendopeptidase F, plasmid\tK08602 pepF; oligoendopeptidase F [EC:3.4.24.-]" }, { "name":"SPSPH_034050 hypothetical protein\tK06972 PITRM1; presequence protease [EC:3.4.24.-]" }, { "name":"SPSPH_018110 pepA; (GenBank) Cytosol aminopeptidase\tK01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]" }, { "name":"SPSPH_000960 hypothetical protein\tK01273 DPEP; membrane dipeptidase [EC:3.4.13.19]" }, { "name":"SPSPH_043730 pepT; (GenBank) Peptidase T\tK01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]" }, { "name":"SPSPH_035720 abgA; (GenBank) p-aminobenzoyl-glutamate hydrolase subunit A\tK12940 abgA; aminobenzoyl-glutamate utilization protein A" }, { "name":"SPSPH_035610 allC; (GenBank) Allantoate amidohydrolase\tK02083 allC; allantoate deiminase [EC:3.5.3.9]" }, { "name":"SPSPH_004870 map_1; (GenBank) Methionine aminopeptidase 1\tK01265 map; methionyl aminopeptidase [EC:3.4.11.18]" }, { "name":"SPSPH_016980 map_2; (GenBank) Methionine aminopeptidase 1\tK01265 map; methionyl aminopeptidase [EC:3.4.11.18]" }, { "name":"SPSPH_020700 ypdF; (GenBank) Aminopeptidase YpdF\tK01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]" }, { "name":"SPSPH_032250 Aminopeptidase T\tK19689 ampS; aminopeptidase [EC:3.4.11.-]" }, { "name":"SPSPH_035710 Aminopeptidase 2\tK19689 ampS; aminopeptidase [EC:3.4.11.-]" }, { "name":"SPSPH_003800 ftsH_2; (GenBank) ATP-dependent zinc metalloprotease FtsH\tK03798 ftsH; cell division protease FtsH [EC:3.4.24.-]" }, { "name":"SPSPH_043830 ftsH4; (GenBank) ATP-dependent zinc metalloprotease FtsH 4\tK03798 ftsH; cell division protease FtsH [EC:3.4.24.-]" }, { "name":"SPSPH_022130 htpX; (GenBank) Protease HtpX\tK03799 htpX; heat shock protein HtpX [EC:3.4.24.-]" }, { "name":"SPSPH_014840 hypothetical protein\tK06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-]" }, { "name":"SPSPH_017660 hypothetical protein\tK11749 rseP; regulator of sigma E protease [EC:3.4.24.-]" }, { "name":"SPSPH_026580 blaR1; (GenBank) Regulatory protein BlaR1\tK02172 blaR1; bla regulator protein blaR1" }, { "name":"SPSPH_040770 htrA; (GenBank) Putative serine protease HtrA\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SPSPH_045170 hypothetical protein\tK01342 aprE; subtilisin [EC:3.4.21.62]" }, { "name":"SPSPH_001060 hypothetical protein\tK07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5\/6) [EC:3.4.16.4]" }, { "name":"SPSPH_018590 dacF; (GenBank) D-alanyl-D-alanine carboxypeptidase DacF\tK07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5\/6) [EC:3.4.16.4]" }, { "name":"SPSPH_018790 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase DacB\tK07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5\/6) [EC:3.4.16.4]" }, { "name":"SPSPH_013630 clpP; (GenBank) ATP-dependent Clp protease proteolytic subunit\tK01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]" }, { "name":"SPSPH_013660 lon1; (GenBank) Lon protease 1\tK01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]" }, { "name":"SPSPH_046140 lon_2; (GenBank) Lon protease\tK01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]" }, { "name":"SPSPH_013650 lon2; (GenBank) Lon protease 2\tK04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53]" }, { "name":"SPSPH_021110 lexA; (GenBank) LexA repressor\tK01356 lexA; repressor LexA [EC:3.4.21.88]" }, { "name":"SPSPH_010520 sipS; (GenBank) Signal peptidase I S\tK03100 lepB; signal peptidase I [EC:3.4.21.89]" }, { "name":"SPSPH_016960 sipT; (GenBank) Signal peptidase I T\tK03100 lepB; signal peptidase I [EC:3.4.21.89]" }, { "name":"SPSPH_030690 ctpB; (GenBank) Carboxy-terminal processing protease CtpB\tK03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]" }, { "name":"SPSPH_002630 sppA; (GenBank) Putative signal peptide peptidase SppA\tK04773 sppA; protease IV [EC:3.4.21.-]" }, { "name":"SPSPH_001900 cphB; (GenBank) Cyanophycinase\tK13282 cphB; cyanophycinase [EC:3.4.15.6]" }, { "name":"SPSPH_020970 spoIVB; (GenBank) SpoIVB peptidase\tK06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]" }, { "name":"SPSPH_017150 clpQ; (GenBank) ATP-dependent protease subunit ClpQ\tK01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]" }, { "name":"SPSPH_037980 ywrD; (GenBank) Glutathione hydrolase-like YwrD proenzyme\tK00681 ggt; gamma-glutamyltranspeptidase \/ glutathione hydrolase [EC:2.3.2.2 3.4.19.13]" }, { "name":"SPSPH_020040 hypothetical protein\tK08303 prtC; U32 family peptidase [EC:3.4.-.-]" }, { "name":"SPSPH_020660 hypothetical protein\tK08303 prtC; U32 family peptidase [EC:3.4.-.-]" }, { "name":"SPSPH_022960 hypothetical protein\tK08303 prtC; U32 family peptidase [EC:3.4.-.-]" } ] }, { "name":"01003 Glycosyltransferases [BR:ssph01003]", "children":[ { "name":"SPSPH_003580 ugtP_1; (GenBank) Processive diacylglycerol beta-glucosyltransferase\tK03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]" }, { "name":"SPSPH_017100 ugtP_2; (GenBank) Processive diacylglycerol beta-glucosyltransferase\tK03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]" }, { "name":"SPSPH_007280 hypothetical protein\tK00752 hasA; hyaluronan synthase [EC:2.4.1.212]" }, { "name":"SPSPH_001130 glgA; (GenBank) Glycogen synthase\tK00703 glgA; starch synthase [EC:2.4.1.21]" }, { "name":"SPSPH_020110 pbpF; (GenBank) Penicillin-binding protein 1F\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"SPSPH_016420 ftsW_1; (GenBank) putative peptidoglycan glycosyltransferase FtsW\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"SPSPH_021620 rodA; (GenBank) putative FtsW-like protein\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"SPSPH_044110 ftsW_2; (GenBank) putative peptidoglycan glycosyltransferase FtsW\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"SPSPH_014820 mrdB; (GenBank) Peptidoglycan glycosyltransferase MrdB\tK05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"SPSPH_021380 tagA; (GenBank) N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase\tK05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]" }, { "name":"SPSPH_033840 tagO; (GenBank) putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase\tK02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate\/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]" }, { "name":"SPSPH_013450 pgaC; (GenBank) Poly-beta-1,6-N-acetyl-D-glucosamine synthase\tK11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]" } ] }, { "name":"01005 Lipopolysaccharide biosynthesis proteins [BR:ssph01005]", "children":[ { "name":"SPSPH_033350 lpxA; (GenBank) Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase\tK00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]" }, { "name":"SPSPH_033330 lpxB; (GenBank) Lipid-A-disaccharide synthase\tK00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]" }, { "name":"SPSPH_033370 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase\tK02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]" }, { "name":"SPSPH_033420 lpxD; (GenBank) UDP-3-O-acylglucosamine N-acyltransferase\tK02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]" }, { "name":"SPSPH_033340 lpxI; (GenBank) UDP-2,3-diacylglucosamine pyrophosphatase LpxI\tK09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]" }, { "name":"SPSPH_033260 lpxL_1; (GenBank) Lipid A biosynthesis lauroyltransferase\tK02517 lpxL; Kdo2-lipid IVA lauroyltransferase\/acyltransferase [EC:2.3.1.241 2.3.1.-]" }, { "name":"SPSPH_033400 lpxL_2; (GenBank) Lipid A biosynthesis lauroyltransferase\tK02517 lpxL; Kdo2-lipid IVA lauroyltransferase\/acyltransferase [EC:2.3.1.241 2.3.1.-]" }, { "name":"SPSPH_033310 lpxK; (GenBank) Tetraacyldisaccharide 4'-kinase\tK02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]" }, { "name":"SPSPH_033290 kdsA; (GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase\tK01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]" }, { "name":"SPSPH_033300 kdsB; (GenBank) 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase\tK00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]" }, { "name":"SPSPH_033270 kdsC; (GenBank) 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC\tK03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]" }, { "name":"SPSPH_033280 kdsD; (GenBank) Arabinose 5-phosphate isomerase KdsD\tK06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]" }, { "name":"SPSPH_033130 hldE; (GenBank) Bifunctional protein HldE\tK21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]" }, { "name":"SPSPH_033120 D-beta-D-heptose 1-phosphate adenylyltransferase\tK21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]" }, { "name":"SPSPH_013300 rfaQ; (GenBank) Lipopolysaccharide core heptosyltransferase RfaQ\tK02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]" }, { "name":"SPSPH_033110 rfaF_2; (GenBank) ADP-heptose--LPS heptosyltransferase 2\tK02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]" }, { "name":"SPSPH_015480 putative glycosyltransferase\tK20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]" }, { "name":"SPSPH_027270 putative glycosyltransferase\tK20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]" }, { "name":"SPSPH_034500 putative glycosyltransferase\tK20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]" }, { "name":"SPSPH_033840 tagO; (GenBank) putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase\tK02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate\/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]" } ] }, { "name":"01011 Peptidoglycan biosynthesis and degradation proteins [BR:ssph01011]", "children":[ { "name":"SPSPH_016450 murA1; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1\tK00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]" }, { "name":"SPSPH_033720 murAA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1\tK00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]" }, { "name":"SPSPH_023060 murB; (GenBank) UDP-N-acetylenolpyruvoylglucosamine reductase\tK00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]" }, { "name":"SPSPH_016440 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase\tK01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]" }, { "name":"SPSPH_016410 murD; (GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase\tK01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]" }, { "name":"SPSPH_002550 murE_1; (GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase\tK01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]" }, { "name":"SPSPH_016380 murE_2; (GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase\tK01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]" }, { "name":"SPSPH_016460 ddlB; (GenBank) D-alanine--D-alanine ligase B\tK01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]" }, { "name":"SPSPH_001040 alr1; (GenBank) Alanine racemase 1\tK01775 alr; alanine racemase [EC:5.1.1.1]" }, { "name":"SPSPH_009910 yrpC; (GenBank) Glutamate racemase 2\tK01776 murI; glutamate racemase [EC:5.1.1.3]" }, { "name":"SPSPH_031870 murI_1; (GenBank) Glutamate racemase\tK01776 murI; glutamate racemase [EC:5.1.1.3]" }, { "name":"SPSPH_039010 murI_2; (GenBank) Glutamate racemase\tK01776 murI; glutamate racemase [EC:5.1.1.3]" }, { "name":"SPSPH_016400 mraY; (GenBank) Phospho-N-acetylmuramoyl-pentapeptide-transferase\tK01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]" }, { "name":"SPSPH_016430 murG; (GenBank) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase\tK02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]" }, { "name":"SPSPH_004420 uppP; (GenBank) Undecaprenyl-diphosphatase\tK06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]" }, { "name":"SPSPH_020110 pbpF; (GenBank) Penicillin-binding protein 1F\tK05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]" }, { "name":"SPSPH_014770 mrdA_1; (GenBank) Peptidoglycan D,D-transpeptidase MrdA\tK05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]" }, { "name":"SPSPH_041060 mrdA_2; (GenBank) Peptidoglycan D,D-transpeptidase MrdA\tK05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]" }, { "name":"SPSPH_000980 spoVD_1; (GenBank) Stage V sporulation protein D\tK08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)" }, { "name":"SPSPH_016370 spoVD_2; (GenBank) Stage V sporulation protein D\tK08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)" }, { "name":"SPSPH_020680 spoVD_3; (GenBank) Stage V sporulation protein D\tK08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)" }, { "name":"SPSPH_021610 pbpA; (GenBank) Penicillin-binding protein A\tK05364 pbpA; penicillin-binding protein A" }, { "name":"SPSPH_001060 hypothetical protein\tK07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5\/6) [EC:3.4.16.4]" }, { "name":"SPSPH_018590 dacF; (GenBank) D-alanyl-D-alanine carboxypeptidase DacF\tK07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5\/6) [EC:3.4.16.4]" }, { "name":"SPSPH_018790 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase DacB\tK07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5\/6) [EC:3.4.16.4]" }, { "name":"SPSPH_016420 ftsW_1; (GenBank) putative peptidoglycan glycosyltransferase FtsW\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"SPSPH_021620 rodA; (GenBank) putative FtsW-like protein\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"SPSPH_044110 ftsW_2; (GenBank) putative peptidoglycan glycosyltransferase FtsW\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"SPSPH_014820 mrdB; (GenBank) Peptidoglycan glycosyltransferase MrdB\tK05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"SPSPH_000120 ykuD; (GenBank) Putative L,D-transpeptidase YkuD\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"SPSPH_019780 hypothetical protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"SPSPH_041320 hypothetical protein\tK19236 ldtA_B_C_E; L,D-transpeptidase" }, { "name":"SPSPH_008290 slt_1; (GenBank) Soluble lytic murein transglycosylase\tK08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]" }, { "name":"SPSPH_022490 slt_2; (GenBank) Soluble lytic murein transglycosylase\tK08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]" }, { "name":"SPSPH_020640 mltG; (GenBank) Endolytic murein transglycosylase\tK07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]" }, { "name":"SPSPH_002570 hypothetical protein\tK06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]" }, { "name":"SPSPH_003600 hypothetical protein\tK06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]" }, { "name":"SPSPH_020280 hypothetical protein\tK06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]" }, { "name":"SPSPH_033690 hypothetical protein\tK06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]" }, { "name":"SPSPH_005070 hypothetical protein\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SPSPH_012070 hypothetical protein\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SPSPH_017840 hypothetical protein\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SPSPH_024580 hypothetical protein\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SPSPH_028890 amiC; (GenBank) N-acetylmuramoyl-L-alanine amidase AmiC\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SPSPH_044400 lytC_3; (GenBank) N-acetylmuramoyl-L-alanine amidase LytC\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SPSPH_045190 lytC_4; (GenBank) N-acetylmuramoyl-L-alanine amidase LytC\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" } ] }, { "name":"01004 Lipid biosynthesis proteins [BR:ssph01004]", "children":[ { "name":"SPSPH_016770 fabD; (GenBank) Malonyl CoA-acyl carrier protein transacylase\tK00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]" }, { "name":"SPSPH_000100 fabHA_1; (GenBank) 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1\tK00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]" }, { "name":"SPSPH_016750 fabHA_2; (GenBank) 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1\tK00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]" }, { "name":"SPSPH_016810 fabF; (GenBank) 3-oxoacyl-[acyl-carrier-protein] synthase 2\tK09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]" }, { "name":"SPSPH_001590 fabG_1; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase FabG\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SPSPH_005640 fabG2; (GenBank) putative oxidoreductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SPSPH_016780 fabG_2; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase\tK00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]" }, { "name":"SPSPH_033360 fabZ; (GenBank) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ\tK02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]" }, { "name":"SPSPH_004040 NADH:quinone reductase\tK02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]" }, { "name":"SPSPH_016760 NADH:quinone reductase\tK02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]" }, { "name":"SPSPH_012840 lcfB; (GenBank) Long-chain-fatty-acid--CoA ligase\tK01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]" }, { "name":"SPSPH_016740 plsX; (GenBank) Phosphate acyltransferase\tK03621 plsX; phosphate acyltransferase [EC:2.3.1.274]" }, { "name":"SPSPH_019010 plsY; (GenBank) Glycerol-3-phosphate acyltransferase\tK08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]" }, { "name":"SPSPH_018900 plsC; (GenBank) 1-acyl-sn-glycerol-3-phosphate acyltransferase\tK00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]" } ] }, { "name":"01008 Polyketide biosynthesis proteins [BR:ssph01008]", "children":[ { "name":"SPSPH_007900 dltA_1; (GenBank) D-alanine--D-alanyl carrier protein ligase\tK12239 pchE; L-cysteine---[L-cysteinyl-carrier protein] ligase PchE [EC:6.2.1.69]" }, { "name":"SPSPH_007940 dltA_2; (GenBank) D-alanine--D-alanyl carrier protein ligase\tK12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69]" }, { "name":"SPSPH_030580 lldD; (GenBank) L-lactate dehydrogenase\tK16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]" }, { "name":"SPSPH_011040 Aspartate racemase\tK01779 racD; aspartate racemase [EC:5.1.1.13]" } ] }, { "name":"01006 Prenyltransferases [BR:ssph01006]", "children":[ { "name":"SPSPH_020890 Farnesyl diphosphate synthase\tK13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]" }, { "name":"SPSPH_017630 uppS; (GenBank) Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific)\tK00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]" }, { "name":"SPSPH_018210 miaA; (GenBank) tRNA dimethylallyltransferase\tK00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]" }, { "name":"SPSPH_013810 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase\tK03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]" } ] }, { "name":"01007 Amino acid related enzymes [BR:ssph01007]", "children":[ { "name":"SPSPH_034290 gltX1; (GenBank) Glutamate--tRNA ligase 1\tK01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]" }, { "name":"SPSPH_027590 glnS; (GenBank) Glutamine--tRNA ligase\tK01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]" }, { "name":"SPSPH_004270 gltX; (GenBank) Glutamate--tRNA ligase\tK09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]" }, { "name":"SPSPH_020120 tyrS_1; (GenBank) Tyrosine--tRNA ligase\tK01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]" }, { "name":"SPSPH_025170 tyrS_2; (GenBank) Tyrosine--tRNA ligase\tK01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]" }, { "name":"SPSPH_018730 trpS; (GenBank) Tryptophan--tRNA ligase\tK01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]" }, { "name":"SPSPH_004290 cysS; (GenBank) Cysteine--tRNA ligase\tK01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]" }, { "name":"SPSPH_002600 argS; (GenBank) Arginine--tRNA ligase\tK01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]" }, { "name":"SPSPH_001730 metG; (GenBank) Methionine--tRNA ligase\tK01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]" }, { "name":"SPSPH_021920 ileS; (GenBank) Isoleucine--tRNA ligase\tK01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]" }, { "name":"SPSPH_014250 valS; (GenBank) Valine--tRNA ligase\tK01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]" }, { "name":"SPSPH_015360 leuS; (GenBank) Leucine--tRNA ligase\tK01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]" }, { "name":"SPSPH_003940 lysS; (GenBank) Lysine--tRNA ligase\tK04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]" }, { "name":"SPSPH_020470 aspS; (GenBank) Aspartate--tRNA ligase\tK01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]" }, { "name":"SPSPH_024050 asnS; (GenBank) Asparagine--tRNA ligase\tK01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]" }, { "name":"SPSPH_020460 hisS; (GenBank) Histidine--tRNA ligase\tK01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]" }, { "name":"SPSPH_019570 glyQ; (GenBank) Glycine--tRNA ligase alpha subunit\tK01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]" }, { "name":"SPSPH_019580 glyS; (GenBank) Glycine--tRNA ligase beta subunit\tK01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]" }, { "name":"SPSPH_042130 serS; (GenBank) Serine--tRNA ligase\tK01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]" }, { "name":"SPSPH_017680 proS; (GenBank) Proline--tRNA ligase\tK01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]" }, { "name":"SPSPH_019910 thrZ; (GenBank) Threonine--tRNA ligase 2\tK01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]" }, { "name":"SPSPH_020590 alaS; (GenBank) Alanine--tRNA ligase\tK01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]" }, { "name":"SPSPH_019990 pheS; (GenBank) Phenylalanine--tRNA ligase alpha subunit\tK01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]" }, { "name":"SPSPH_020000 pheT; (GenBank) Phenylalanine--tRNA ligase beta subunit\tK01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]" }, { "name":"SPSPH_002080 Aspartate\/prephenate aminotransferase\tK00812 aspB; aspartate aminotransferase [EC:2.6.1.1]" }, { "name":"SPSPH_000630 dapL_1; (GenBank) LL-diaminopimelate aminotransferase\tK10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]" }, { "name":"SPSPH_021250 dapL_2; (GenBank) LL-diaminopimelate aminotransferase\tK10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]" }, { "name":"SPSPH_035440 dapX; (GenBank) putative N-acetyl-LL-diaminopimelate aminotransferase\tK10907 K10907; aminotransferase [EC:2.6.1.-]" }, { "name":"SPSPH_027470 hisC_2; (GenBank) Histidinol-phosphate aminotransferase\tK00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]" }, { "name":"SPSPH_013060 bioF; (GenBank) 8-amino-7-oxononanoate synthase\tK00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]" }, { "name":"SPSPH_008720 patB_1; (GenBank) Cystathionine beta-lyase PatB\tK14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]" }, { "name":"SPSPH_010070 patB_2; (GenBank) Cystathionine beta-lyase PatB\tK14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]" }, { "name":"SPSPH_029260 patB_3; (GenBank) Cystathionine beta-lyase PatB\tK14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]" }, { "name":"SPSPH_005140 argD_1; (GenBank) Acetylornithine aminotransferase\tK00821 argD; acetylornithine\/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]" }, { "name":"SPSPH_022970 argD_2; (GenBank) Acetylornithine aminotransferase\tK00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]" }, { "name":"SPSPH_025750 davT; (GenBank) 5-aminovalerate aminotransferase DavT\tK00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]" }, { "name":"SPSPH_022150 patA; (GenBank) Putrescine aminotransferase\tK09251 patA; putrescine aminotransferase [EC:2.6.1.82]" }, { "name":"SPSPH_013080 bioK; (GenBank) L-Lysine--8-amino-7-oxononanoate transaminase\tK00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]" }, { "name":"SPSPH_029660 hpa_tpa; (GenBank) Hypotaurine\/taurine--pyruvate aminotransferase\tK03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]" }, { "name":"SPSPH_041000 hemL; (GenBank) Glutamate-1-semialdehyde 2,1-aminomutase\tK01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]" }, { "name":"SPSPH_005180 ilvK; (GenBank) Branched-chain-amino-acid aminotransferase 2\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"SPSPH_014050 ilvE; (GenBank) Branched-chain-amino-acid aminotransferase\tK00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]" }, { "name":"SPSPH_042200 serC; (GenBank) Phosphoserine aminotransferase\tK00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]" }, { "name":"SPSPH_034570 pucG; (GenBank) (S)-ureidoglycine--glyoxylate transaminase\tK00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]" } ] }, { "name":"00199 Cytochrome P450" }, { "name":"00194 Photosynthesis proteins [BR:ssph00194]", "children":[ { "name":"SPSPH_033730 atpC_1; (GenBank) ATP synthase epsilon chain\tK02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon" }, { "name":"SPSPH_039020 atpC_2; (GenBank) ATP synthase epsilon chain\tK02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon" }, { "name":"SPSPH_033740 atpD_1; (GenBank) ATP synthase subunit beta\tK02112 ATPF1B; F-type H+\/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]" }, { "name":"SPSPH_039030 atpD_2; (GenBank) ATP synthase subunit beta\tK02112 ATPF1B; F-type H+\/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]" }, { "name":"SPSPH_033750 atpG_1; (GenBank) ATP synthase gamma chain\tK02115 ATPF1G; F-type H+-transporting ATPase subunit gamma" }, { "name":"SPSPH_039040 atpG_2; (GenBank) ATP synthase gamma chain\tK02115 ATPF1G; F-type H+-transporting ATPase subunit gamma" }, { "name":"SPSPH_033760 atpA_1; (GenBank) ATP synthase subunit alpha\tK02111 ATPF1A; F-type H+\/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]" }, { "name":"SPSPH_039050 atpA_2; (GenBank) ATP synthase subunit alpha\tK02111 ATPF1A; F-type H+\/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]" }, { "name":"SPSPH_033770 atpH_1; (GenBank) ATP synthase subunit delta\tK02113 ATPF1D; F-type H+-transporting ATPase subunit delta" }, { "name":"SPSPH_039060 atpH_2; (GenBank) ATP synthase subunit delta\tK02113 ATPF1D; F-type H+-transporting ATPase subunit delta" }, { "name":"SPSPH_033780 atpF_1; (GenBank) ATP synthase subunit b, sodium ion specific\tK02109 ATPF0B; F-type H+-transporting ATPase subunit b" }, { "name":"SPSPH_039070 atpF_2; (GenBank) ATP synthase subunit b, sodium ion specific\tK02109 ATPF0B; F-type H+-transporting ATPase subunit b" }, { "name":"SPSPH_033790 atpE_1; (GenBank) ATP synthase subunit c, sodium ion specific\tK02110 ATPF0C; F-type H+-transporting ATPase subunit c" }, { "name":"SPSPH_039080 atpE_2; (GenBank) ATP synthase subunit c\tK02110 ATPF0C; F-type H+-transporting ATPase subunit c" }, { "name":"SPSPH_033800 atpB_1; (GenBank) ATP synthase subunit a\tK02108 ATPF0A; F-type H+-transporting ATPase subunit a" }, { "name":"SPSPH_039090 atpB_2; (GenBank) ATP synthase subunit a\tK02108 ATPF0A; F-type H+-transporting ATPase subunit a" } ] } ] }, { "name":"09182 Protein families: genetic information processing", "children":[ { "name":"03000 Transcription factors [BR:ssph03000]", "children":[ { "name":"SPSPH_045610 hypothetical protein\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]" }, { "name":"SPSPH_011550 hypothetical protein\tK13653 K13653; AraC family transcriptional regulator" }, { "name":"SPSPH_029420 alkA; (GenBank) putative bifunctional transcriptional activator\/DNA repair enzyme AlkA\tK13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response \/ DNA-3-methyladenine glycosylase II [EC:3.2.2.21]" }, { "name":"SPSPH_032030 gltC_2; (GenBank) HTH-type transcriptional regulator GltC\tK21755 bsdA; LysR family transcriptional regulator, salicylic acid-responsive activator of bsdBCD" }, { "name":"SPSPH_033670 spoIIID; (GenBank) Stage III sporulation protein D\tK06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D" }, { "name":"SPSPH_019590 ccpN; (GenBank) Transcriptional repressor CcpN\tK23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator" }, { "name":"SPSPH_027200 nagR_1; (GenBank) HTH-type transcriptional repressor NagR\tK03710 K03710; GntR family transcriptional regulator" }, { "name":"SPSPH_029670 nagR_2; (GenBank) HTH-type transcriptional repressor NagR\tK03710 K03710; GntR family transcriptional regulator" }, { "name":"SPSPH_035900 phnR; (GenBank) Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons\tK03710 K03710; GntR family transcriptional regulator" }, { "name":"SPSPH_013770 lutR_2; (GenBank) HTH-type transcriptional regulator LutR\tK05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex" }, { "name":"SPSPH_010980 gabR_1; (GenBank) HTH-type transcriptional regulatory protein GabR\tK00375 K00375; GntR family transcriptional regulator \/ MocR family aminotransferase" }, { "name":"SPSPH_014100 gabR_2; (GenBank) HTH-type transcriptional regulatory protein GabR\tK00375 K00375; GntR family transcriptional regulator \/ MocR family aminotransferase" }, { "name":"SPSPH_027810 gabR_3; (GenBank) HTH-type transcriptional regulatory protein GabR\tK00375 K00375; GntR family transcriptional regulator \/ MocR family aminotransferase" }, { "name":"SPSPH_012990 hisC_1; (GenBank) Histidinol-phosphate aminotransferase\tK18907 norG; GntR family transcriptional regulator, regulator for abcA and norABC" }, { "name":"SPSPH_000830 hypothetical protein\tK09017 rutR; TetR\/AcrR family transcriptional regulator" }, { "name":"SPSPH_025380 adhR; (GenBank) HTH-type transcriptional regulator AdhR\tK21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator" }, { "name":"SPSPH_020440 fur; (GenBank) Ferric uptake regulation protein\tK03711 fur; Fur family transcriptional regulator, ferric uptake regulator" }, { "name":"SPSPH_015510 zur_1; (GenBank) Zinc-specific metallo-regulatory protein\tK02076 zurR; Fur family transcriptional regulator, zinc uptake regulator" }, { "name":"SPSPH_031340 perR_1; (GenBank) Peroxide operon regulator\tK09825 perR; Fur family transcriptional regulator, peroxide stress response regulator" }, { "name":"SPSPH_040840 perR_2; (GenBank) Transcriptional regulator PerR\tK09825 perR; Fur family transcriptional regulator, peroxide stress response regulator" }, { "name":"SPSPH_000400 kdgR_1; (GenBank) Transcriptional regulator KdgR\tK19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor" }, { "name":"SPSPH_044560 xynR; (GenBank) HTH-type transcriptional regulator XynR\tK19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor" }, { "name":"SPSPH_002210 glxR; (GenBank) CRP-like cAMP-activated global transcriptional regulator\tK10914 crp; CRP\/FNR family transcriptional regulator, cyclic AMP receptor protein" }, { "name":"SPSPH_009810 crp_1; (GenBank) CRP-like cAMP-activated global transcriptional regulator\tK10914 crp; CRP\/FNR family transcriptional regulator, cyclic AMP receptor protein" }, { "name":"SPSPH_034130 crp_2; (GenBank) cAMP-activated global transcriptional regulator CRP\tK10914 crp; CRP\/FNR family transcriptional regulator, cyclic AMP receptor protein" }, { "name":"SPSPH_020510 cymR; (GenBank) HTH-type transcriptional regulator CymR\tK17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor" }, { "name":"SPSPH_025840 hypothetical protein\tK03892 arsR; ArsR family transcriptional regulator, arsenate\/arsenite\/antimonite-responsive transcriptional repressor" }, { "name":"SPSPH_036700 ziaR; (GenBank) Transcriptional repressor SmtB\tK21903 cadC; ArsR family transcriptional regulator, lead\/cadmium\/zinc\/bismuth-responsive transcriptional repressor" }, { "name":"SPSPH_013120 mntR_1; (GenBank) HTH-type transcriptional regulator MntR\tK11924 mntR; DtxR family transcriptional regulator, manganese transport regulator" }, { "name":"SPSPH_025500 mntR_2; (GenBank) HTH-type transcriptional regulator MntR\tK11924 mntR; DtxR family transcriptional regulator, manganese transport regulator" }, { "name":"SPSPH_003850 birA; (GenBank) Bifunctional ligase\/repressor BirA\tK03524 birA; BirA family transcriptional regulator, biotin operon repressor \/ biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]" }, { "name":"SPSPH_001960 purR; (GenBank) Pur operon repressor\tK09685 purR; HTH-type transcriptional regulator, purine operon repressor" }, { "name":"SPSPH_012590 acoR_1; (GenBank) Acetoin dehydrogenase operon transcriptional activator AcoR\tK21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR" }, { "name":"SPSPH_014410 acoR_2; (GenBank) Acetoin dehydrogenase operon transcriptional activator AcoR\tK21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR" }, { "name":"SPSPH_028610 norR_11; (GenBank) Anaerobic nitric oxide reductase transcription regulator NorR\tK21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR" }, { "name":"SPSPH_028840 acoR_3; (GenBank) Acetoin dehydrogenase operon transcriptional activator AcoR\tK21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR" }, { "name":"SPSPH_044150 norR_23; (GenBank) Anaerobic nitric oxide reductase transcription regulator NorR\tK21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR" }, { "name":"SPSPH_030950 cdaR_2; (GenBank) Carbohydrate diacid regulator\tK02647 cdaR; carbohydrate diacid regulator" }, { "name":"SPSPH_037940 cdaR_3; (GenBank) Carbohydrate diacid regulator\tK02647 cdaR; carbohydrate diacid regulator" }, { "name":"SPSPH_008880 rocR_1; (GenBank) Arginine utilization regulatory protein RocR\tK06714 rocR; arginine utilization regulatory protein" }, { "name":"SPSPH_010380 rocR_2; (GenBank) Arginine utilization regulatory protein RocR\tK06714 rocR; arginine utilization regulatory protein" }, { "name":"SPSPH_010390 rocR_3; (GenBank) Arginine utilization regulatory protein RocR\tK06714 rocR; arginine utilization regulatory protein" }, { "name":"SPSPH_030050 rocR_4; (GenBank) Arginine utilization regulatory protein RocR\tK06714 rocR; arginine utilization regulatory protein" }, { "name":"SPSPH_031310 rocR_5; (GenBank) Arginine utilization regulatory protein RocR\tK06714 rocR; arginine utilization regulatory protein" }, { "name":"SPSPH_038010 rocR_6; (GenBank) Arginine utilization regulatory protein RocR\tK06714 rocR; arginine utilization regulatory protein" }, { "name":"SPSPH_042670 rocR_7; (GenBank) Arginine utilization regulatory protein RocR\tK06714 rocR; arginine utilization regulatory protein" }, { "name":"SPSPH_014380 rex1_1; (GenBank) Redox-sensing transcriptional repressor Rex 1\tK01926 rex; redox-sensing transcriptional repressor" }, { "name":"SPSPH_036520 rex1_2; (GenBank) Redox-sensing transcriptional repressor Rex 1\tK01926 rex; redox-sensing transcriptional repressor" }, { "name":"SPSPH_005370 codY_1; (GenBank) GTP-sensing transcriptional pleiotropic repressor CodY\tK03706 codY; transcriptional pleiotropic repressor" }, { "name":"SPSPH_017170 codY_2; (GenBank) GTP-sensing transcriptional pleiotropic repressor CodY\tK03706 codY; transcriptional pleiotropic repressor" }, { "name":"SPSPH_003430 hypothetical protein\tK07727 K07727; putative transcriptional regulator" }, { "name":"SPSPH_012030 hypothetical protein\tK07723 ndoAI; CopG family transcriptional regulator \/ antitoxin EndoAI" }, { "name":"SPSPH_006240 csoR_1; (GenBank) Copper-sensing transcriptional repressor CsoR\tK21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor" }, { "name":"SPSPH_010190 csoR_2; (GenBank) Copper-sensing transcriptional repressor CsoR\tK21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor" }, { "name":"SPSPH_035620 pucR_1; (GenBank) Purine catabolism regulatory protein\tK09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein" }, { "name":"SPSPH_035670 pucR_2; (GenBank) Purine catabolism regulatory protein\tK09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein" }, { "name":"SPSPH_035690 pucR_3; (GenBank) Purine catabolism regulatory protein\tK09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein" }, { "name":"SPSPH_001720 hypothetical protein\tK06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes" }, { "name":"SPSPH_003270 spoVT; (GenBank) Stage V sporulation protein T\tK04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T" }, { "name":"SPSPH_046490 spo0J; (GenBank) Stage 0 sporulation protein J\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"SPSPH_046570 noc; (GenBank) Nucleoid occlusion protein\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"SPSPH_037090 carD_5; (GenBank) RNA polymerase-binding transcription factor CarD\tK07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription" }, { "name":"SPSPH_030400 glpP; (GenBank) Glycerol uptake operon antiterminator regulatory protein\tK02443 glpP; glycerol uptake operon antiterminator" }, { "name":"SPSPH_020950 argR; (GenBank) Arginine repressor\tK03402 argR; transcriptional regulator of arginine metabolism" }, { "name":"SPSPH_019300 hrcA; (GenBank) Heat-inducible transcription repressor HrcA\tK03705 hrcA; heat-inducible transcriptional repressor" }, { "name":"SPSPH_004070 ctsR; (GenBank) Transcriptional regulator CtsR\tK03708 ctsR; transcriptional regulator of stress and heat shock response" }, { "name":"SPSPH_026330 norR_9; (GenBank) Anaerobic nitric oxide reductase transcription regulator NorR\tK03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport" }, { "name":"SPSPH_037860 tyrR; (GenBank) Transcriptional regulatory protein TyrR\tK03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport" }, { "name":"SPSPH_030310 cggR; (GenBank) Central glycolytic genes regulator\tK05311 cggR; central glycolytic genes regulator" }, { "name":"SPSPH_005940 rnk; (GenBank) Regulator of nucleoside diphosphate kinase\tK06140 rnk; regulator of nucleoside diphosphate kinase" }, { "name":"SPSPH_021840 pyrR; (GenBank) Bifunctional protein PyrR\tK02825 pyrR; pyrimidine operon attenuation protein \/ uracil phosphoribosyltransferase [EC:2.4.2.9]" }, { "name":"SPSPH_016570 nrdR; (GenBank) Transcriptional repressor NrdR\tK07738 nrdR; transcriptional repressor NrdR" }, { "name":"SPSPH_037890 hutP_1; (GenBank) Hut operon positive regulatory protein\tK09683 hutP; hut operon positive regulatory protein" }, { "name":"SPSPH_037910 hutP_2; (GenBank) Hut operon positive regulatory protein\tK09683 hutP; hut operon positive regulatory protein" }, { "name":"SPSPH_016340 mraZ; (GenBank) Transcriptional regulator MraZ\tK03925 mraZ; transcriptional regulator MraZ" } ] }, { "name":"03021 Transcription machinery [BR:ssph03021]", "children":[ { "name":"SPSPH_004930 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha\tK03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]" }, { "name":"SPSPH_004570 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta\tK03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]" }, { "name":"SPSPH_004580 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta'\tK03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]" }, { "name":"SPSPH_021760 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega\tK03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]" }, { "name":"SPSPH_019640 sigA_1; (GenBank) RNA polymerase sigma factor SigA\tK03086 rpoD; RNA polymerase primary sigma factor" }, { "name":"SPSPH_043200 sigA_2; (GenBank) RNA polymerase sigma factor SigA\tK03086 rpoD; RNA polymerase primary sigma factor" }, { "name":"SPSPH_027680 sigM; (GenBank) ECF RNA polymerase sigma factor SigM\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"SPSPH_034020 sigD_2; (GenBank) ECF RNA polymerase sigma factor SigD\tK03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily" }, { "name":"SPSPH_015580 sigK; (GenBank) RNA polymerase sigma-28 factor\tK03091 sigE_F_G; RNA polymerase sigma-E\/F\/G factor" }, { "name":"SPSPH_016530 sigE_2; (GenBank) RNA polymerase sigma-35 factor\tK03091 sigE_F_G; RNA polymerase sigma-E\/F\/G factor" }, { "name":"SPSPH_016540 sigG; (GenBank) RNA polymerase sigma-G factor\tK03091 sigE_F_G; RNA polymerase sigma-E\/F\/G factor" }, { "name":"SPSPH_018620 sigF; (GenBank) RNA polymerase sigma-F factor\tK03091 sigE_F_G; RNA polymerase sigma-E\/F\/G factor" }, { "name":"SPSPH_004380 sigH_1; (GenBank) RNA polymerase sigma-H factor\tK27000 sigH; RNA polymerase sigma-H factor" }, { "name":"SPSPH_023490 sigH_2; (GenBank) RNA polymerase sigma-H factor\tK27000 sigH; RNA polymerase sigma-H factor" }, { "name":"SPSPH_046080 hypothetical protein\tK27000 sigH; RNA polymerase sigma-H factor" }, { "name":"SPSPH_030410 rpoN; (GenBank) RNA polymerase sigma-54 factor\tK03092 rpoN; RNA polymerase sigma-54 factor" }, { "name":"SPSPH_017530 sigD_1; (GenBank) RNA polymerase sigma-D factor\tK02405 fliA; RNA polymerase sigma factor FliA" }, { "name":"SPSPH_017720 nusA; (GenBank) Transcription termination\/antitermination protein NusA\tK02600 nusA; transcription termination\/antitermination protein NusA" }, { "name":"SPSPH_020850 nusB; (GenBank) Transcription antitermination protein NusB\tK03625 nusB; transcription antitermination protein NusB" }, { "name":"SPSPH_004520 nusG; (GenBank) Transcription termination\/antitermination protein NusG\tK02601 nusG; transcription termination\/antitermination protein NusG" }, { "name":"SPSPH_014290 spoIIAB_2; (GenBank) Anti-sigma F factor\tK17752 rsbT; serine\/threonine-protein kinase RsbT [EC:2.7.11.1]" }, { "name":"SPSPH_007160 rsbV; (GenBank) Anti-sigma-B factor antagonist\tK04749 rsbV; anti-sigma B factor antagonist" }, { "name":"SPSPH_014620 hypothetical protein\tK03803 rseC; sigma-E factor negative regulatory protein RseC" }, { "name":"SPSPH_003930 greA; (GenBank) Transcription elongation factor GreA\tK03624 greA; transcription elongation factor GreA" } ] }, { "name":"03019 Messenger RNA biogenesis [BR:ssph03019]", "children":[ { "name":"SPSPH_012430 ftsH_4; (GenBank) ATP-dependent zinc metalloprotease FtsH\tK13525 VCP; transitional endoplasmic reticulum ATPase" }, { "name":"SPSPH_014870 rng; (GenBank) Ribonuclease G\tK08301 rng; ribonuclease G [EC:3.1.26.-]" }, { "name":"SPSPH_016820 rnc; (GenBank) Ribonuclease 3\tK03685 rnc; ribonuclease III [EC:3.1.26.3]" }, { "name":"SPSPH_005650 rnjA_1; (GenBank) Ribonuclease J1\tK12574 rnj; ribonuclease J [EC:3.1.-.-]" }, { "name":"SPSPH_017940 rnjA_2; (GenBank) Ribonuclease J1\tK12574 rnj; ribonuclease J [EC:3.1.-.-]" }, { "name":"SPSPH_018080 rny; (GenBank) Ribonuclease Y\tK18682 rny; ribonucrease Y [EC:3.1.-.-]" }, { "name":"SPSPH_030190 rnr; (GenBank) Ribonuclease R\tK12573 rnr; ribonuclease R [EC:3.1.13.1]" }, { "name":"SPSPH_043780 yhaM; (GenBank) 3'-5' exoribonuclease YhaM\tK03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]" }, { "name":"SPSPH_018050 cshA_1; (GenBank) DEAD-box ATP-dependent RNA helicase CshA\tK05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]" }, { "name":"SPSPH_023610 cshE; (GenBank) DEAD-box ATP-dependent RNA helicase CshE\tK05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]" }, { "name":"SPSPH_035530 cshA_2; (GenBank) DEAD-box ATP-dependent RNA helicase CshA\tK05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]" }, { "name":"SPSPH_023340 recQ; (GenBank) ATP-dependent DNA helicase RecQ\tK03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]" }, { "name":"SPSPH_039520 srmB; (GenBank) ATP-dependent RNA helicase SrmB\tK03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]" }, { "name":"SPSPH_030260 eno; (GenBank) Enolase\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]" }, { "name":"SPSPH_017810 pnp_2; (GenBank) Polyribonucleotide nucleotidyltransferase\tK00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]" }, { "name":"SPSPH_007580 pfkA; (GenBank) ATP-dependent 6-phosphofructokinase\tK00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]" }, { "name":"SPSPH_011000 dnaK2; (GenBank) Chaperone protein dnaK2\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SPSPH_019330 dnaK; (GenBank) Chaperone protein DnaK\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SPSPH_012170 groL_1; (GenBank) 60 kDa chaperonin\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SPSPH_042250 groL_3; (GenBank) 60 kDa chaperonin\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SPSPH_018220 hfq; (GenBank) RNA-binding protein Hfq\tK03666 hfq; host factor-I protein" }, { "name":"SPSPH_043650 ppk; (GenBank) Polyphosphate kinase\tK00937 ppk1; polyphosphate kinase [EC:2.7.4.1]" }, { "name":"SPSPH_032590 csrA; (GenBank) Translational regulator CsrA\tK03563 csrA; carbon storage regulator" }, { "name":"SPSPH_030520 yvcJ; (GenBank) Nucleotide-binding protein YvcJ\tK06958 rapZ; RNase adapter protein RapZ" }, { "name":"SPSPH_013530 hrpB; (GenBank) ATP-dependent RNA helicase HrpB\tK03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]" } ] }, { "name":"03041 Spliceosome" }, { "name":"03011 Ribosome [BR:ssph03011]", "children":[ { "name":"SPSPH_018940 ispH; (GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase\tK02945 RP-S1; small subunit ribosomal protein S1" }, { "name":"SPSPH_017570 rpsB; (GenBank) 30S ribosomal protein S2\tK02967 RP-S2; small subunit ribosomal protein S2" }, { "name":"SPSPH_004710 rpsC; (GenBank) 30S ribosomal protein S3\tK02982 RP-S3; small subunit ribosomal protein S3" }, { "name":"SPSPH_004920 rpsD; (GenBank) 30S ribosomal protein S4\tK02986 RP-S4; small subunit ribosomal protein S4" }, { "name":"SPSPH_004820 rpsE; (GenBank) 30S ribosomal protein S5\tK02988 RP-S5; small subunit ribosomal protein S5" }, { "name":"SPSPH_046210 rpsF; (GenBank) 30S ribosomal protein S6\tK02990 RP-S6; small subunit ribosomal protein S6" }, { "name":"SPSPH_004610 rpsG; (GenBank) 30S ribosomal protein S7\tK02992 RP-S7; small subunit ribosomal protein S7" }, { "name":"SPSPH_004790 rpsH; (GenBank) 30S ribosomal protein S8\tK02994 RP-S8; small subunit ribosomal protein S8" }, { "name":"SPSPH_005000 rpsI; (GenBank) 30S ribosomal protein S9\tK02996 RP-S9; small subunit ribosomal protein S9" }, { "name":"SPSPH_004640 rpsJ; (GenBank) 30S ribosomal protein S10\tK02946 RP-S10; small subunit ribosomal protein S10" }, { "name":"SPSPH_004910 rpsK; (GenBank) 30S ribosomal protein S11\tK02948 RP-S11; small subunit ribosomal protein S11" }, { "name":"SPSPH_004600 rpsL; (GenBank) 30S ribosomal protein S12\tK02950 RP-S12; small subunit ribosomal protein S12" }, { "name":"SPSPH_004900 rpsM; (GenBank) 30S ribosomal protein S13\tK02952 RP-S13; small subunit ribosomal protein S13" }, { "name":"SPSPH_004780 rpsN1; (GenBank) 30S ribosomal protein S14\tK02954 RP-S14; small subunit ribosomal protein S14" }, { "name":"SPSPH_017800 rpsO; (GenBank) 30S ribosomal protein S15\tK02956 RP-S15; small subunit ribosomal protein S15" }, { "name":"SPSPH_016890 rpsP; (GenBank) 30S ribosomal protein S16\tK02959 RP-S16; small subunit ribosomal protein S16" }, { "name":"SPSPH_004740 rpsQ; (GenBank) 30S ribosomal protein S17\tK02961 RP-S17; small subunit ribosomal protein S17" }, { "name":"SPSPH_046190 rpsR; (GenBank) 30S ribosomal protein S18\tK02963 RP-S18; small subunit ribosomal protein S18" }, { "name":"SPSPH_004690 rpsS; (GenBank) 30S ribosomal protein S19\tK02965 RP-S19; small subunit ribosomal protein S19" }, { "name":"SPSPH_019240 rpsT; (GenBank) 30S ribosomal protein S20\tK02968 RP-S20; small subunit ribosomal protein S20" }, { "name":"SPSPH_019390 rpsU; (GenBank) 30S ribosomal protein S21\tK02970 RP-S21; small subunit ribosomal protein S21" }, { "name":"SPSPH_004540 rplA; (GenBank) 50S ribosomal protein L1\tK02863 RP-L1; large subunit ribosomal protein L1" }, { "name":"SPSPH_004680 rplB; (GenBank) 50S ribosomal protein L2\tK02886 RP-L2; large subunit ribosomal protein L2" }, { "name":"SPSPH_004650 rplC; (GenBank) 50S ribosomal protein L3\tK02906 RP-L3; large subunit ribosomal protein L3" }, { "name":"SPSPH_004660 rplD; (GenBank) 50S ribosomal protein L4\tK02926 RP-L4; large subunit ribosomal protein L4" }, { "name":"SPSPH_004770 rplE; (GenBank) 50S ribosomal protein L5\tK02931 RP-L5; large subunit ribosomal protein L5" }, { "name":"SPSPH_004800 rplF; (GenBank) 50S ribosomal protein L6\tK02933 RP-L6; large subunit ribosomal protein L6" }, { "name":"SPSPH_046150 rplI; (GenBank) 50S ribosomal protein L9\tK02939 RP-L9; large subunit ribosomal protein L9" }, { "name":"SPSPH_004550 rplJ; (GenBank) 50S ribosomal protein L10\tK02864 RP-L10; large subunit ribosomal protein L10" }, { "name":"SPSPH_004530 rplK; (GenBank) 50S ribosomal protein L11\tK02867 RP-L11; large subunit ribosomal protein L11" }, { "name":"SPSPH_004560 rplL; (GenBank) 50S ribosomal protein L7\/L12\tK02935 RP-L7; large subunit ribosomal protein L7\/L12" }, { "name":"SPSPH_004990 rplM; (GenBank) 50S ribosomal protein L13\tK02871 RP-L13; large subunit ribosomal protein L13" }, { "name":"SPSPH_004750 rplN; (GenBank) 50S ribosomal protein L14\tK02874 RP-L14; large subunit ribosomal protein L14" }, { "name":"SPSPH_004840 rplO; (GenBank) 50S ribosomal protein L15\tK02876 RP-L15; large subunit ribosomal protein L15" }, { "name":"SPSPH_004720 rplP; (GenBank) 50S ribosomal protein L16\tK02878 RP-L16; large subunit ribosomal protein L16" }, { "name":"SPSPH_004940 rplQ; (GenBank) 50S ribosomal protein L17\tK02879 RP-L17; large subunit ribosomal protein L17" }, { "name":"SPSPH_004810 rplR; (GenBank) 50S ribosomal protein L18\tK02881 RP-L18; large subunit ribosomal protein L18" }, { "name":"SPSPH_016950 rplS; (GenBank) 50S ribosomal protein L19\tK02884 RP-L19; large subunit ribosomal protein L19" }, { "name":"SPSPH_019940 rplT; (GenBank) 50S ribosomal protein L20\tK02887 RP-L20; large subunit ribosomal protein L20" }, { "name":"SPSPH_014880 rplU; (GenBank) 50S ribosomal protein L21\tK02888 RP-L21; large subunit ribosomal protein L21" }, { "name":"SPSPH_004700 rplV; (GenBank) 50S ribosomal protein L22\tK02890 RP-L22; large subunit ribosomal protein L22" }, { "name":"SPSPH_004670 rplW; (GenBank) 50S ribosomal protein L23\tK02892 RP-L23; large subunit ribosomal protein L23" }, { "name":"SPSPH_004760 rplX; (GenBank) 50S ribosomal protein L24\tK02895 RP-L24; large subunit ribosomal protein L24" }, { "name":"SPSPH_014900 rpmA; (GenBank) 50S ribosomal protein L27\tK02899 RP-L27; large subunit ribosomal protein L27" }, { "name":"SPSPH_021510 rpmB; (GenBank) 50S ribosomal protein L28\tK02902 RP-L28; large subunit ribosomal protein L28" }, { "name":"SPSPH_004730 rpmC; (GenBank) 50S ribosomal protein L29\tK02904 RP-L29; large subunit ribosomal protein L29" }, { "name":"SPSPH_004830 rpmD; (GenBank) 50S ribosomal protein L30\tK02907 RP-L30; large subunit ribosomal protein L30" }, { "name":"SPSPH_033970 rpmE; (GenBank) 50S ribosomal protein L31\tK02909 RP-L31; large subunit ribosomal protein L31" }, { "name":"SPSPH_016720 rpmF; (GenBank) 50S ribosomal protein L32\tK02911 RP-L32; large subunit ribosomal protein L32" }, { "name":"SPSPH_004490 rpmGA; (GenBank) 50S ribosomal protein L33 1\tK02913 RP-L33; large subunit ribosomal protein L33" }, { "name":"SPSPH_019930 rpmI; (GenBank) 50S ribosomal protein L35\tK02916 RP-L35; large subunit ribosomal protein L35" }, { "name":"SPSPH_004590 rplGB; (GenBank) Ribosome-associated protein L7Ae-like protein\tK07590 RP-L7A; large subunit ribosomal protein L7A" }, { "name":"SPSPH_000210 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_000270 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_003950 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_007190 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_012240 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_020150 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_024490 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_024540 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_028430 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_028550 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_037630 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_041310 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_000230 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_000300 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_004000 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_007220 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_012270 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_024450 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_024510 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_028410 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_028540 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_037610 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_041300 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_000220 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_000280 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_000310 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_003980 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_004010 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_007210 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_012250 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_024460 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_028420 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_037620 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" } ] }, { "name":"03009 Ribosome biogenesis [BR:ssph03009]", "children":[ { "name":"SPSPH_016820 rnc; (GenBank) Ribonuclease 3\tK03685 rnc; ribonuclease III [EC:3.1.26.3]" }, { "name":"SPSPH_012430 ftsH_4; (GenBank) ATP-dependent zinc metalloprotease FtsH\tK13525 VCP; transitional endoplasmic reticulum ATPase" }, { "name":"SPSPH_019520 era; (GenBank) GTPase Era\tK03595 era; GTPase" }, { "name":"SPSPH_014920 obg; (GenBank) GTPase Obg\tK03979 obgE; GTPase [EC:3.6.5.-]" }, { "name":"SPSPH_017720 nusA; (GenBank) Transcription termination\/antitermination protein NusA\tK02600 nusA; transcription termination\/antitermination protein NusA" }, { "name":"SPSPH_020850 nusB; (GenBank) Transcription antitermination protein NusB\tK03625 nusB; transcription antitermination protein NusB" }, { "name":"SPSPH_004520 nusG; (GenBank) Transcription termination\/antitermination protein NusG\tK02601 nusG; transcription termination\/antitermination protein NusG" }, { "name":"SPSPH_001780 rsmA; (GenBank) Ribosomal RNA small subunit methyltransferase A\tK02528 ksgA; 16S rRNA (adenine1518-N6\/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]" }, { "name":"SPSPH_021670 rsmB; (GenBank) Ribosomal RNA small subunit methyltransferase B\tK03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]" }, { "name":"SPSPH_016640 rsmD; (GenBank) Ribosomal RNA small subunit methyltransferase D\tK08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]" }, { "name":"SPSPH_019360 rsmE; (GenBank) Ribosomal RNA small subunit methyltransferase E\tK09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]" }, { "name":"SPSPH_046580 rsmG; (GenBank) Ribosomal RNA small subunit methyltransferase G\tK03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]" }, { "name":"SPSPH_016350 rsmH; (GenBank) Ribosomal RNA small subunit methyltransferase H\tK03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]" }, { "name":"SPSPH_001710 rsmI; (GenBank) Ribosomal RNA small subunit methyltransferase I\tK07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]" }, { "name":"SPSPH_020920 tlyA; (GenBank) 16S\/23S rRNA (cytidine-2'-O)-methyltransferase TlyA\tK06442 tlyA; 23S rRNA (cytidine1920-2'-O)\/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]" }, { "name":"SPSPH_004350 Putative TrmH family tRNA\/rRNA methyltransferase\tK03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]" }, { "name":"SPSPH_040760 rlmH; (GenBank) Ribosomal RNA large subunit methyltransferase H\tK00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]" }, { "name":"SPSPH_021660 rlmN; (GenBank) putative dual-specificity RNA methyltransferase RlmN\tK06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]" }, { "name":"SPSPH_026650 rlmCD; (GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD\tK03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]" }, { "name":"SPSPH_018840 rluB; (GenBank) Ribosomal large subunit pseudouridine synthase B\tK06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]" }, { "name":"SPSPH_013140 putative RNA pseudouridine synthase\tK06180 rluD; 23S rRNA pseudouridine1911\/1915\/1917 synthase [EC:5.4.99.23]" }, { "name":"SPSPH_021860 rluD_1; (GenBank) Ribosomal large subunit pseudouridine synthase D\tK06180 rluD; 23S rRNA pseudouridine1911\/1915\/1917 synthase [EC:5.4.99.23]" }, { "name":"SPSPH_024130 rluD_2; (GenBank) Ribosomal large subunit pseudouridine synthase D\tK06180 rluD; 23S rRNA pseudouridine1911\/1915\/1917 synthase [EC:5.4.99.23]" }, { "name":"SPSPH_012110 rimI; (GenBank) [Ribosomal protein S18]-alanine N-acetyltransferase\tK03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase \/ [ribosomal protein L31]-L-lysine N-acetyltransferase [EC:2.3.1.266 2.3.1.338]" }, { "name":"SPSPH_016920 rimM; (GenBank) Ribosome maturation factor RimM\tK02860 rimM; 16S rRNA processing protein RimM" }, { "name":"SPSPH_018030 rimO; (GenBank) Ribosomal protein S12 methylthiotransferase RimO\tK14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]" }, { "name":"SPSPH_019350 prmA; (GenBank) Ribosomal protein L11 methyltransferase\tK02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]" }, { "name":"SPSPH_014870 rng; (GenBank) Ribonuclease G\tK08301 rng; ribonuclease G [EC:3.1.26.-]" }, { "name":"SPSPH_020620 yrrK; (GenBank) Putative pre-16S rRNA nuclease\tK07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]" }, { "name":"SPSPH_004300 mrnC; (GenBank) Mini-ribonuclease 3\tK11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]" }, { "name":"SPSPH_001770 rnmV; (GenBank) Ribonuclease M5\tK05985 rnmV; ribonuclease M5 [EC:3.1.26.8]" }, { "name":"SPSPH_018050 cshA_1; (GenBank) DEAD-box ATP-dependent RNA helicase CshA\tK05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]" }, { "name":"SPSPH_023610 cshE; (GenBank) DEAD-box ATP-dependent RNA helicase CshE\tK05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]" }, { "name":"SPSPH_035530 cshA_2; (GenBank) DEAD-box ATP-dependent RNA helicase CshA\tK05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]" }, { "name":"SPSPH_021590 rsgA_1; (GenBank) Small ribosomal subunit biogenesis GTPase RsgA\tK06949 rsgA; ribosome biogenesis GTPase \/ thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]" }, { "name":"SPSPH_029730 rsgA_2; (GenBank) Small ribosomal subunit biogenesis GTPase RsgA\tK06949 rsgA; ribosome biogenesis GTPase \/ thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]" }, { "name":"SPSPH_019000 der_1; (GenBank) GTPase Der\tK03977 engA; GTPase" }, { "name":"SPSPH_016970 rbgA; (GenBank) Ribosome biogenesis GTPase A\tK14540 rbgA; ribosome biogenesis GTPase A" }, { "name":"SPSPH_021060 hflX; (GenBank) GTPase HflX\tK03665 hflX; GTPase" }, { "name":"SPSPH_033930 ywlC; (GenBank) Threonylcarbamoyl-AMP synthase\tK07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]" }, { "name":"SPSPH_020410 relA; (GenBank) GTP pyrophosphokinase\tK01139 spoT; GTP diphosphokinase \/ guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]" }, { "name":"SPSPH_017760 rbfA; (GenBank) Ribosome-binding factor A\tK02834 rbfA; ribosome-binding factor A" }, { "name":"SPSPH_017710 rimP; (GenBank) Ribosome maturation factor RimP\tK09748 rimP; ribosome maturation factor RimP" }, { "name":"SPSPH_000030 hypothetical protein\tK14761 rlbA; ribosome-associated protein" }, { "name":"SPSPH_015020 rsfS; (GenBank) Ribosomal silencing factor RsfS\tK09710 ybeB; ribosome-associated protein" }, { "name":"SPSPH_019490 ybeY; (GenBank) Endoribonuclease YbeY\tK07042 ybeY; probable rRNA maturation factor" }, { "name":"SPSPH_014930 RNA-binding protein\tK07574 yhbY; RNA-binding protein" }, { "name":"SPSPH_030860 yvyD; (GenBank) Ribosome hibernation promotion factor\tK05808 hpf; ribosome hibernation promoting factor" }, { "name":"SPSPH_046230 ychF; (GenBank) Ribosome-binding ATPase YchF\tK06942 ychF; ribosome-binding ATPase" }, { "name":"SPSPH_016710 hypothetical protein\tK07040 yceD; DUF177 domain-containing protein" } ] }, { "name":"03016 Transfer RNA biogenesis [BR:ssph03016]", "children":[ { "name":"SPSPH_039290 cca_1; (GenBank) CCA-adding enzyme\tK00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]" }, { "name":"SPSPH_042210 cca_2; (GenBank) CCA-adding enzyme\tK00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]" }, { "name":"SPSPH_041700 rtcB_1; (GenBank) RNA-splicing ligase RtcB\tK14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate\/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]" }, { "name":"SPSPH_034290 gltX1; (GenBank) Glutamate--tRNA ligase 1\tK01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]" }, { "name":"SPSPH_017680 proS; (GenBank) Proline--tRNA ligase\tK01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]" }, { "name":"SPSPH_021920 ileS; (GenBank) Isoleucine--tRNA ligase\tK01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]" }, { "name":"SPSPH_015360 leuS; (GenBank) Leucine--tRNA ligase\tK01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]" }, { "name":"SPSPH_001730 metG; (GenBank) Methionine--tRNA ligase\tK01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]" }, { "name":"SPSPH_027590 glnS; (GenBank) Glutamine--tRNA ligase\tK01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]" }, { "name":"SPSPH_002600 argS; (GenBank) Arginine--tRNA ligase\tK01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]" }, { "name":"SPSPH_003940 lysS; (GenBank) Lysine--tRNA ligase\tK04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]" }, { "name":"SPSPH_020470 aspS; (GenBank) Aspartate--tRNA ligase\tK01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]" }, { "name":"SPSPH_020590 alaS; (GenBank) Alanine--tRNA ligase\tK01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]" }, { "name":"SPSPH_024050 asnS; (GenBank) Asparagine--tRNA ligase\tK01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]" }, { "name":"SPSPH_019910 thrZ; (GenBank) Threonine--tRNA ligase 2\tK01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]" }, { "name":"SPSPH_042130 serS; (GenBank) Serine--tRNA ligase\tK01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]" }, { "name":"SPSPH_004290 cysS; (GenBank) Cysteine--tRNA ligase\tK01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]" }, { "name":"SPSPH_014250 valS; (GenBank) Valine--tRNA ligase\tK01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]" }, { "name":"SPSPH_020460 hisS; (GenBank) Histidine--tRNA ligase\tK01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]" }, { "name":"SPSPH_019990 pheS; (GenBank) Phenylalanine--tRNA ligase alpha subunit\tK01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]" }, { "name":"SPSPH_020000 pheT; (GenBank) Phenylalanine--tRNA ligase beta subunit\tK01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]" }, { "name":"SPSPH_020120 tyrS_1; (GenBank) Tyrosine--tRNA ligase\tK01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]" }, { "name":"SPSPH_025170 tyrS_2; (GenBank) Tyrosine--tRNA ligase\tK01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]" }, { "name":"SPSPH_018730 trpS; (GenBank) Tryptophan--tRNA ligase\tK01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]" }, { "name":"SPSPH_020420 dtd; (GenBank) D-aminoacyl-tRNA deacylase\tK07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]" }, { "name":"SPSPH_019380 Purine nucleoside phosphoramidase\tK02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]" }, { "name":"SPSPH_018170 miaB_1; (GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase\tK06168 CDK5RAP1; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]" }, { "name":"SPSPH_019370 mtaB; (GenBank) Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB\tK15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase [EC:2.8.4.5]" }, { "name":"SPSPH_044140 trmB; (GenBank) tRNA (guanine-N(7)-)-methyltransferase\tK03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]" }, { "name":"SPSPH_004980 truA; (GenBank) tRNA pseudouridine synthase A\tK06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]" }, { "name":"SPSPH_017780 truB; (GenBank) tRNA pseudouridine synthase B\tK03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]" }, { "name":"SPSPH_020520 iscS; (GenBank) Cysteine desulfurase IscS\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]" }, { "name":"SPSPH_033930 ywlC; (GenBank) Threonylcarbamoyl-AMP synthase\tK07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]" }, { "name":"SPSPH_018210 miaA; (GenBank) tRNA dimethylallyltransferase\tK00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]" }, { "name":"SPSPH_046600 mnmE; (GenBank) tRNA modification GTPase MnmE\tK03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]" }, { "name":"SPSPH_046590 mnmG_2; (GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG\tK03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme" }, { "name":"SPSPH_046270 selD; (GenBank) Selenide, water dikinase\tK01008 selD; selenide, water dikinase [EC:2.7.9.3]" }, { "name":"SPSPH_046660 rnpA; (GenBank) Ribonuclease P protein component\tK03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]" }, { "name":"SPSPH_031800 rph; (GenBank) Ribonuclease PH\tK00989 rph; ribonuclease PH [EC:2.7.7.56]" }, { "name":"SPSPH_041960 ettA_2; (GenBank) Energy-dependent translational throttle protein EttA\tK06020 ettA; energy-dependent translational throttle protein EttA" }, { "name":"SPSPH_019570 glyQ; (GenBank) Glycine--tRNA ligase alpha subunit\tK01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]" }, { "name":"SPSPH_019580 glyS; (GenBank) Glycine--tRNA ligase beta subunit\tK01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]" }, { "name":"SPSPH_004270 gltX; (GenBank) Glutamate--tRNA ligase\tK09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]" }, { "name":"SPSPH_024670 ybaK; (GenBank) Cys-tRNA(Pro)\/Cys-tRNA(Cys) deacylase YbaK\tK03976 ybaK; Cys-tRNA(Pro)\/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]" }, { "name":"SPSPH_009280 proX_1; (GenBank) Prolyl-tRNA editing protein ProX\tK19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]" }, { "name":"SPSPH_023350 proX_2; (GenBank) Prolyl-tRNA editing protein ProX\tK19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]" }, { "name":"SPSPH_043360 tadA; (GenBank) tRNA-specific adenosine deaminase\tK11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]" }, { "name":"SPSPH_003880 dusB; (GenBank) tRNA-dihydrouridine synthase B\tK05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]" }, { "name":"SPSPH_035260 cmoA; (GenBank) Carboxy-S-adenosyl-L-methionine synthase\tK15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]" }, { "name":"SPSPH_017130 trmFO_1; (GenBank) Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO\tK04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]" }, { "name":"SPSPH_016930 trmD; (GenBank) tRNA (guanine-N(1)-)-methyltransferase\tK00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]" }, { "name":"SPSPH_019690 trmK; (GenBank) tRNA (adenine(22)-N(1))-methyltransferase\tK06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]" }, { "name":"SPSPH_023090 trmL; (GenBank) tRNA (cytidine(34)-2'-O)-methyltransferase\tK03216 trmL; tRNA (cytidine\/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]" }, { "name":"SPSPH_019980 aviRb; (GenBank) 23S rRNA (uridine(2479)-2'-O)-methyltransferase\tK03437 spoU; RNA methyltransferase, TrmH family" }, { "name":"SPSPH_020540 mnmA; (GenBank) tRNA-specific 2-thiouridylase MnmA\tK00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]" }, { "name":"SPSPH_026850 ttcA; (GenBank) tRNA-cytidine(32) 2-sulfurtransferase\tK14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA" }, { "name":"SPSPH_020290 queA; (GenBank) S-adenosylmethionine:tRNA ribosyltransferase-isomerase\tK07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]" }, { "name":"SPSPH_015980 queC; (GenBank) 7-cyano-7-deazaguanine synthase\tK06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]" }, { "name":"SPSPH_021340 hypothetical protein\tK01737 queD; 6-pyruvoyltetrahydropterin\/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]" }, { "name":"SPSPH_021330 queE; (GenBank) 7-carboxy-7-deazaguanine synthase\tK10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]" }, { "name":"SPSPH_020260 queH; (GenBank) Epoxyqueuosine reductase QueH\tK09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]" }, { "name":"SPSPH_017980 selU; (GenBank) tRNA 2-selenouridine synthase\tK06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]" }, { "name":"SPSPH_020300 tgt; (GenBank) Queuine tRNA-ribosyltransferase\tK00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]" }, { "name":"SPSPH_003780 tilS; (GenBank) tRNA(Ile)-lysidine synthase\tK04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]" }, { "name":"SPSPH_012100 tsaB; (GenBank) tRNA threonylcarbamoyladenosine biosynthesis protein TsaB\tK14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB" }, { "name":"SPSPH_012130 tsaD_1; (GenBank) tRNA N6-adenosine threonylcarbamoyltransferase\tK25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]" }, { "name":"SPSPH_041490 tcdA; (GenBank) tRNA threonylcarbamoyladenosine dehydratase\tK22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase" }, { "name":"SPSPH_016690 tmcAL; (GenBank) tRNA(Met) cytidine acetate ligase\tK27343 tmcAL; tRNAmet cytidine acetate ligase [EC:6.3.1.22]" }, { "name":"SPSPH_030190 rnr; (GenBank) Ribonuclease R\tK12573 rnr; ribonuclease R [EC:3.1.13.1]" }, { "name":"SPSPH_017810 pnp_2; (GenBank) Polyribonucleotide nucleotidyltransferase\tK00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]" } ] }, { "name":"03012 Translation factors [BR:ssph03012]", "children":[ { "name":"SPSPH_017750 infB; (GenBank) Translation initiation factor IF-2\tK02519 infB; translation initiation factor IF-2" }, { "name":"SPSPH_019920 infC; (GenBank) Translation initiation factor IF-3\tK02520 infC; translation initiation factor IF-3" }, { "name":"SPSPH_032740 yheS; (GenBank) putative ABC transporter ATP-binding protein YheS\tK06158 ABCF3; ATP-binding cassette, subfamily F, member 3" }, { "name":"SPSPH_017580 tsf; (GenBank) Elongation factor Ts\tK02357 tsf; elongation factor Ts" }, { "name":"SPSPH_004480 tuf_1; (GenBank) Elongation factor Tu\tK02358 tuf; elongation factor Tu" }, { "name":"SPSPH_004630 tuf_2; (GenBank) Elongation factor Tu\tK02358 tuf; elongation factor Tu" }, { "name":"SPSPH_004620 fusA_1; (GenBank) Elongation factor G\tK02355 fusA; elongation factor G" }, { "name":"SPSPH_022080 fusA_2; (GenBank) Elongation factor G\tK02355 fusA; elongation factor G" }, { "name":"SPSPH_009080 selB_1; (GenBank) Selenocysteine-specific elongation factor\tK03833 selB; selenocysteine-specific elongation factor" }, { "name":"SPSPH_046390 selB_2; (GenBank) Selenocysteine-specific elongation factor\tK03833 selB; selenocysteine-specific elongation factor" }, { "name":"SPSPH_033950 prfA; (GenBank) Peptide chain release factor 1\tK02835 prfA; peptide chain release factor 1" }, { "name":"SPSPH_017600 frr; (GenBank) Ribosome-recycling factor\tK02838 frr; ribosome recycling factor" }, { "name":"SPSPH_033940 prmC; (GenBank) Release factor glutamine methyltransferase\tK02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]" }, { "name":"SPSPH_002020 pth; (GenBank) Peptidyl-tRNA hydrolase\tK01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]" }, { "name":"SPSPH_004890 infA; (GenBank) Translation initiation factor IF-1\tK02518 infA; translation initiation factor IF-1" }, { "name":"SPSPH_020710 efp; (GenBank) Elongation factor P\tK02356 efp; elongation factor P" }, { "name":"SPSPH_030800 prfB_1; (GenBank) Peptide chain release factor 2\tK02836 prfB; peptide chain release factor 2" }, { "name":"SPSPH_019880 prfC; (GenBank) Peptide chain release factor 3\tK02837 prfC; peptide chain release factor 3" }, { "name":"SPSPH_041730 prfB_2; (GenBank) Peptide chain release factor RF2\tK02839 prfH; peptide chain release factor" } ] }, { "name":"03110 Chaperones and folding catalysts [BR:ssph03110]", "children":[ { "name":"SPSPH_000730 clpB1; (GenBank) Chaperone protein ClpB 1\tK03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB" }, { "name":"SPSPH_004100 clpC; (GenBank) Negative regulator of genetic competence ClpC\/MecB\tK03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC" }, { "name":"SPSPH_013640 clpX; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpX\tK03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX" }, { "name":"SPSPH_017160 clpY; (GenBank) ATP-dependent protease ATPase subunit ClpY\tK03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU" }, { "name":"SPSPH_022220 htpG; (GenBank) Chaperone protein HtpG\tK04079 HSP90A; molecular chaperone HtpG" }, { "name":"SPSPH_011000 dnaK2; (GenBank) Chaperone protein dnaK2\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SPSPH_019330 dnaK; (GenBank) Chaperone protein DnaK\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SPSPH_012170 groL_1; (GenBank) 60 kDa chaperonin\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SPSPH_042250 groL_3; (GenBank) 60 kDa chaperonin\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SPSPH_019340 dnaJ_2; (GenBank) Chaperone protein DnaJ\tK03686 dnaJ; molecular chaperone DnaJ" }, { "name":"SPSPH_010990 dnaJ_1; (GenBank) Chaperone protein DnaJ\tK05516 cbpA; curved DNA-binding protein" }, { "name":"SPSPH_021520 hslO; (GenBank) 33 kDa chaperonin\tK04083 hslO; molecular chaperone Hsp33" }, { "name":"SPSPH_019320 grpE; (GenBank) Protein GrpE\tK03687 GRPE; molecular chaperone GrpE" }, { "name":"SPSPH_042260 18 kDa heat shock protein\tK13993 HSP20; HSP20 family protein" }, { "name":"SPSPH_012160 groS_1; (GenBank) 10 kDa chaperonin\tK04078 groES; chaperonin GroES" }, { "name":"SPSPH_042240 groS_2; (GenBank) 10 kDa chaperonin\tK04078 groES; chaperonin GroES" }, { "name":"SPSPH_040770 htrA; (GenBank) Putative serine protease HtrA\tK04771 degP; serine protease Do [EC:3.4.21.107]" }, { "name":"SPSPH_003800 ftsH_2; (GenBank) ATP-dependent zinc metalloprotease FtsH\tK03798 ftsH; cell division protease FtsH [EC:3.4.24.-]" }, { "name":"SPSPH_043830 ftsH4; (GenBank) ATP-dependent zinc metalloprotease FtsH 4\tK03798 ftsH; cell division protease FtsH [EC:3.4.24.-]" }, { "name":"SPSPH_033800 atpB_1; (GenBank) ATP synthase subunit a\tK02108 ATPF0A; F-type H+-transporting ATPase subunit a" }, { "name":"SPSPH_039090 atpB_2; (GenBank) ATP synthase subunit a\tK02108 ATPF0A; F-type H+-transporting ATPase subunit a" }, { "name":"SPSPH_001000 hybF; (GenBank) Hydrogenase maturation factor HybF\tK04651 hypA; hydrogenase nickel incorporation protein HypA\/HybF" }, { "name":"SPSPH_001010 hypB; (GenBank) Hydrogenase maturation factor HypB\tK04652 hypB; hydrogenase nickel incorporation protein HypB" }, { "name":"SPSPH_045170 hypothetical protein\tK01342 aprE; subtilisin [EC:3.4.21.62]" }, { "name":"SPSPH_016260 ppiB_1; (GenBank) Peptidyl-prolyl cis-trans isomerase B\tK03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]" }, { "name":"SPSPH_009100 trxA_1; (GenBank) Thioredoxin\tK03671 TXN; thioredoxin" }, { "name":"SPSPH_009300 trxA_2; (GenBank) Thioredoxin\tK03671 TXN; thioredoxin" }, { "name":"SPSPH_015370 trxA_3; (GenBank) Thioredoxin 1\tK03671 TXN; thioredoxin" }, { "name":"SPSPH_016280 trxA_4; (GenBank) Thioredoxin 1\tK03671 TXN; thioredoxin" } ] }, { "name":"04131 Membrane trafficking [BR:ssph04131]", "children":[ { "name":"SPSPH_022100 ndk; (GenBank) Nucleoside diphosphate kinase\tK00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]" }, { "name":"SPSPH_012430 ftsH_4; (GenBank) ATP-dependent zinc metalloprotease FtsH\tK13525 VCP; transitional endoplasmic reticulum ATPase" }, { "name":"SPSPH_012580 yqiK; (GenBank) Inner membrane protein YqiK\tK07192 FLOT; flotillin" }, { "name":"SPSPH_019720 mneA; (GenBank) Putative manganese exporter\tK23541 TMEM165; Ca2+\/H+ antiporter, TMEM165\/GDT1 family" }, { "name":"SPSPH_026150 hypothetical protein\tK23541 TMEM165; Ca2+\/H+ antiporter, TMEM165\/GDT1 family" }, { "name":"SPSPH_025860 arsA; (GenBank) Arsenical pump-driving ATPase\tK01551 arsA; arsenite\/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]" }, { "name":"SPSPH_028280 hypothetical protein\tK00844 HK; hexokinase [EC:2.7.1.1]" }, { "name":"SPSPH_030300 gap; (GenBank) Glyceraldehyde-3-phosphate dehydrogenase\tK00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]" }, { "name":"SPSPH_022700 pyk_1; (GenBank) Pyruvate kinase\tK00873 PK; pyruvate kinase [EC:2.7.1.40]" }, { "name":"SPSPH_030320 pyk_2; (GenBank) Pyruvate kinase\tK00873 PK; pyruvate kinase [EC:2.7.1.40]" }, { "name":"SPSPH_022220 htpG; (GenBank) Chaperone protein HtpG\tK04079 HSP90A; molecular chaperone HtpG" } ] }, { "name":"04121 Ubiquitin system" }, { "name":"03051 Proteasome [BR:ssph03051]", "children":[ { "name":"SPSPH_022220 htpG; (GenBank) Chaperone protein HtpG\tK04079 HSP90A; molecular chaperone HtpG" } ] }, { "name":"03032 DNA replication proteins [BR:ssph03032]", "children":[ { "name":"SPSPH_044680 rnhA; (GenBank) Ribonuclease HI\tK03469 rnhA; ribonuclease HI [EC:3.1.26.4]" }, { "name":"SPSPH_045610 hypothetical protein\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]" }, { "name":"SPSPH_003300 hup; (GenBank) DNA-binding protein HU\tK03530 hupB; DNA-binding protein HU-beta" }, { "name":"SPSPH_000010 dnaA; (GenBank) Chromosomal replication initiator protein DnaA\tK02313 dnaA; chromosomal replication initiator protein" }, { "name":"SPSPH_018340 radA_2; (GenBank) DNA repair protein RadA\tK02314 dnaB; replicative DNA helicase [EC:5.6.2.3]" }, { "name":"SPSPH_046130 dnaC; (GenBank) Replicative DNA helicase\tK02314 dnaB; replicative DNA helicase [EC:5.6.2.3]" }, { "name":"SPSPH_019630 dnaG; (GenBank) DNA primase\tK02316 dnaG; DNA primase [EC:2.7.7.101]" }, { "name":"SPSPH_024390 ssbA_1; (GenBank) Single-stranded DNA-binding protein A\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_028210 ssbA_2; (GenBank) Single-stranded DNA-binding protein A\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_046200 Single-stranded DNA-binding protein\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_047420 ssb; (GenBank) Single-stranded DNA-binding protein\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_022940 dnaE; (GenBank) DNA polymerase III subunit alpha\tK02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]" }, { "name":"SPSPH_017700 polC_1; (GenBank) DNA polymerase III PolC-type\tK03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]" }, { "name":"SPSPH_000020 dnaN; (GenBank) Beta sliding clamp\tK02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]" }, { "name":"SPSPH_019230 yqeN; (GenBank) putative protein YqeN\tK02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]" }, { "name":"SPSPH_001680 hypothetical protein\tK02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]" }, { "name":"SPSPH_037320 polC_2; (GenBank) DNA polymerase III PolC-type\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]" }, { "name":"SPSPH_042760 ruvB_2; (GenBank) Holliday junction ATP-dependent DNA helicase RuvB\tK02343 dnaX; DNA polymerase III subunit gamma\/tau [EC:2.7.7.7]" }, { "name":"SPSPH_016990 rnhB; (GenBank) Ribonuclease HII\tK03470 rnhB; ribonuclease HII [EC:3.1.26.4]" }, { "name":"SPSPH_015960 rnhC; (GenBank) Ribonuclease HIII\tK03471 rnhC; ribonuclease HIII [EC:3.1.26.4]" }, { "name":"SPSPH_022520 polA; (GenBank) DNA polymerase I\tK02335 polA; DNA polymerase I [EC:2.7.7.7]" }, { "name":"SPSPH_026760 ligA; (GenBank) DNA ligase\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]" }, { "name":"SPSPH_000200 gyrA; (GenBank) DNA gyrase subunit A\tK02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]" }, { "name":"SPSPH_000070 gyrB; (GenBank) DNA gyrase subunit B\tK02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]" }, { "name":"SPSPH_017120 topA; (GenBank) DNA topoisomerase 1\tK03168 topA; DNA topoisomerase I [EC:5.6.2.1]" }, { "name":"SPSPH_013290 topB_1; (GenBank) DNA topoisomerase 3\tK03169 topB; DNA topoisomerase III [EC:5.6.2.1]" }, { "name":"SPSPH_023620 topB_2; (GenBank) DNA topoisomerase 3\tK03169 topB; DNA topoisomerase III [EC:5.6.2.1]" } ] }, { "name":"03036 Chromosome and associated proteins [BR:ssph03036]", "children":[ { "name":"SPSPH_045610 hypothetical protein\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]" }, { "name":"SPSPH_016820 rnc; (GenBank) Ribonuclease 3\tK03685 rnc; ribonuclease III [EC:3.1.26.3]" }, { "name":"SPSPH_012580 yqiK; (GenBank) Inner membrane protein YqiK\tK07192 FLOT; flotillin" }, { "name":"SPSPH_003300 hup; (GenBank) DNA-binding protein HU\tK03530 hupB; DNA-binding protein HU-beta" }, { "name":"SPSPH_010990 dnaJ_1; (GenBank) Chaperone protein DnaJ\tK05516 cbpA; curved DNA-binding protein" }, { "name":"SPSPH_000010 dnaA; (GenBank) Chromosomal replication initiator protein DnaA\tK02313 dnaA; chromosomal replication initiator protein" }, { "name":"SPSPH_018220 hfq; (GenBank) RNA-binding protein Hfq\tK03666 hfq; host factor-I protein" }, { "name":"SPSPH_016850 smc_1; (GenBank) Chromosome partition protein Smc\tK03529 smc; chromosome segregation protein" }, { "name":"SPSPH_018740 scpA; (GenBank) Segregation and condensation protein A\tK05896 scpA; segregation and condensation protein A" }, { "name":"SPSPH_018750 scpB; (GenBank) Segregation and condensation protein B\tK06024 scpB; segregation and condensation protein B" }, { "name":"SPSPH_016500 ftsA_3; (GenBank) Cell division protein FtsA\tK03590 ftsA; cell division protein FtsA" }, { "name":"SPSPH_030720 ftsE_2; (GenBank) Cell division ATP-binding protein FtsE\tK09812 ftsE; cell division transport system ATP-binding protein" }, { "name":"SPSPH_002790 hypothetical protein\tK03466 ftsK; DNA segregation ATPase FtsK\/SpoIIIE, S-DNA-T family" }, { "name":"SPSPH_017970 spoIIIE; (GenBank) DNA translocase SpoIIIE\tK03466 ftsK; DNA segregation ATPase FtsK\/SpoIIIE, S-DNA-T family" }, { "name":"SPSPH_016470 ftsQ; (GenBank) Cell division protein FtsQ\tK03589 ftsQ; cell division protein FtsQ" }, { "name":"SPSPH_016420 ftsW_1; (GenBank) putative peptidoglycan glycosyltransferase FtsW\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"SPSPH_021620 rodA; (GenBank) putative FtsW-like protein\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"SPSPH_044110 ftsW_2; (GenBank) putative peptidoglycan glycosyltransferase FtsW\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"SPSPH_030710 ftsX; (GenBank) Cell division protein FtsX\tK09811 ftsX; cell division transport system permease protein" }, { "name":"SPSPH_016510 ftsZ; (GenBank) Cell division protein FtsZ\tK03531 ftsZ; cell division protein FtsZ" }, { "name":"SPSPH_020010 zapA; (GenBank) Cell division protein ZapA\tK09888 zapA; cell division protein ZapA" }, { "name":"SPSPH_005070 hypothetical protein\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SPSPH_012070 hypothetical protein\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SPSPH_017840 hypothetical protein\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SPSPH_024580 hypothetical protein\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SPSPH_028890 amiC; (GenBank) N-acetylmuramoyl-L-alanine amidase AmiC\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SPSPH_044400 lytC_3; (GenBank) N-acetylmuramoyl-L-alanine amidase LytC\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SPSPH_045190 lytC_4; (GenBank) N-acetylmuramoyl-L-alanine amidase LytC\tK01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]" }, { "name":"SPSPH_006710 mdtA_1; (GenBank) Multidrug resistance protein MdtA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_008160 acrE; (GenBank) Multidrug export protein AcrE\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_013320 bepF; (GenBank) Efflux pump periplasmic linker BepF\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_015880 mdtA_3; (GenBank) Multidrug resistance protein MdtA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_027730 mdtA_5; (GenBank) Multidrug resistance protein MdtA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_039660 acrA; (GenBank) Multidrug efflux pump subunit AcrA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_042800 mdtA_6; (GenBank) Multidrug resistance protein MdtA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_014790 minC; (GenBank) Septum site-determining protein MinC\tK03610 minC; septum site-determining protein MinC" }, { "name":"SPSPH_014800 minD; (GenBank) Septum site-determining protein MinD\tK03609 minD; septum site-determining protein MinD" }, { "name":"SPSPH_014810 minE; (GenBank) Cell division topological specificity factor\tK03608 minE; cell division topological specificity factor" }, { "name":"SPSPH_021940 divIVA; (GenBank) Septum site-determining protein DivIVA\tK04074 divIVA; cell division initiation protein" }, { "name":"SPSPH_021970 sepF_1; (GenBank) Cell division protein SepF\tK09772 sepF; cell division inhibitor SepF" }, { "name":"SPSPH_023020 sepF_2; (GenBank) Cell division protein SepF\tK09772 sepF; cell division inhibitor SepF" }, { "name":"SPSPH_014740 mreB; (GenBank) Cell shape-determining protein MreB\tK03569 mreB; rod shape-determining protein MreB and related proteins" }, { "name":"SPSPH_033660 mbl; (GenBank) Cell shape-determining protein Mbl\tK03569 mreB; rod shape-determining protein MreB and related proteins" }, { "name":"SPSPH_014750 mreC; (GenBank) Cell shape-determining protein MreC\tK03570 mreC; rod shape-determining protein MreC" }, { "name":"SPSPH_014760 hypothetical protein\tK03571 mreD; rod shape-determining protein MreD" }, { "name":"SPSPH_014820 mrdB; (GenBank) Peptidoglycan glycosyltransferase MrdB\tK05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"SPSPH_040740 hypothetical protein\tK03496 parA; chromosome partitioning protein" }, { "name":"SPSPH_046500 soj_1; (GenBank) Sporulation initiation inhibitor protein Soj\tK03496 parA; chromosome partitioning protein" }, { "name":"SPSPH_046670 soj_2; (GenBank) Sporulation initiation inhibitor protein Soj\tK03496 parA; chromosome partitioning protein" }, { "name":"SPSPH_046490 spo0J; (GenBank) Stage 0 sporulation protein J\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"SPSPH_046570 noc; (GenBank) Nucleoid occlusion protein\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"SPSPH_046590 mnmG_2; (GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG\tK03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme" }, { "name":"SPSPH_046580 rsmG; (GenBank) Ribosomal RNA small subunit methyltransferase G\tK03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]" }, { "name":"SPSPH_017130 trmFO_1; (GenBank) Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO\tK04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]" }, { "name":"SPSPH_017140 xerC_2; (GenBank) Tyrosine recombinase XerC\tK03733 xerC; integrase\/recombinase XerC" }, { "name":"SPSPH_018560 xerD_1; (GenBank) Tyrosine recombinase XerD\tK04763 xerD; integrase\/recombinase XerD" }, { "name":"SPSPH_003290 hypothetical protein\tK02499 yabN; tetrapyrrole methylase family protein \/ MazG family protein" }, { "name":"SPSPH_027830 hypothetical protein\tK04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]" }, { "name":"SPSPH_013670 engB; (GenBank) putative GTP-binding protein EngB\tK03978 engB; GTP-binding protein" }, { "name":"SPSPH_030500 whiA; (GenBank) putative cell division protein WhiA\tK09762 whiA; cell division protein WhiA" } ] }, { "name":"03400 DNA repair and recombination proteins [BR:ssph03400]", "children":[ { "name":"SPSPH_029410 ogt_1; (GenBank) Methylated-DNA--protein-cysteine methyltransferase\tK00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]" }, { "name":"SPSPH_030570 ogt_2; (GenBank) Methylated-DNA--protein-cysteine methyltransferase\tK00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]" }, { "name":"SPSPH_013150 mutY; (GenBank) Adenine DNA glycosylase\tK03575 mutY; A\/G-specific adenine glycosylase [EC:3.2.2.31]" }, { "name":"SPSPH_023280 nth; (GenBank) Endonuclease III\tK10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]" }, { "name":"SPSPH_000550 mutX; (GenBank) 8-oxo-dGTP diphosphatase\tK03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]" }, { "name":"SPSPH_017860 dut; (GenBank) Deoxyuridine 5'-triphosphate nucleotidohydrolase\tK01520 dut; dUTP diphosphatase [EC:3.6.1.23]" }, { "name":"SPSPH_000780 mug; (GenBank) G\/U mismatch-specific DNA glycosylase\tK03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]" }, { "name":"SPSPH_042150 hypothetical protein\tK21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]" }, { "name":"SPSPH_029420 alkA; (GenBank) putative bifunctional transcriptional activator\/DNA repair enzyme AlkA\tK13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response \/ DNA-3-methyladenine glycosylase II [EC:3.2.2.21]" }, { "name":"SPSPH_014090 tag; (GenBank) DNA-3-methyladenine glycosylase 1\tK01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]" }, { "name":"SPSPH_013480 mutM_1; (GenBank) Formamidopyrimidine-DNA glycosylase\tK10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]" }, { "name":"SPSPH_022510 mutM_2; (GenBank) Formamidopyrimidine-DNA glycosylase\tK10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]" }, { "name":"SPSPH_038950 exoA; (GenBank) Exodeoxyribonuclease\tK01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]" }, { "name":"SPSPH_023080 nfo; (GenBank) endonuclease 4\tK01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]" }, { "name":"SPSPH_020390 hypothetical protein\tK07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]" }, { "name":"SPSPH_026760 ligA; (GenBank) DNA ligase\tK01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]" }, { "name":"SPSPH_022520 polA; (GenBank) DNA polymerase I\tK02335 polA; DNA polymerase I [EC:2.7.7.7]" }, { "name":"SPSPH_030660 uvrA; (GenBank) UvrABC system protein A\tK03701 uvrA; excinuclease ABC subunit A" }, { "name":"SPSPH_030670 uvrB; (GenBank) UvrABC system protein B\tK03702 uvrB; excinuclease ABC subunit B" }, { "name":"SPSPH_030650 uvrC; (GenBank) UvrABC system protein C\tK03703 uvrC; excinuclease ABC subunit C" }, { "name":"SPSPH_026770 pcrA; (GenBank) ATP-dependent DNA helicase PcrA\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]" }, { "name":"SPSPH_035420 helD; (GenBank) DNA helicase IV\tK03657 uvrD; ATP-dependent DNA helicase UvrD\/PcrA [EC:5.6.2.4]" }, { "name":"SPSPH_004570 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta\tK03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]" }, { "name":"SPSPH_004580 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta'\tK03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]" }, { "name":"SPSPH_004930 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha\tK03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]" }, { "name":"SPSPH_021760 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega\tK03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]" }, { "name":"SPSPH_003260 mfd; (GenBank) Transcription-repair-coupling factor\tK03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]" }, { "name":"SPSPH_018180 mutS; (GenBank) DNA mismatch repair protein MutS\tK03555 mutS; DNA mismatch repair protein MutS" }, { "name":"SPSPH_020050 mutS2; (GenBank) Endonuclease MutS2\tK07456 mutS2; DNA mismatch repair protein MutS2" }, { "name":"SPSPH_018190 mutL; (GenBank) DNA mismatch repair protein MutL\tK03572 mutL; DNA mismatch repair protein MutL" }, { "name":"SPSPH_020870 xseA; (GenBank) Exodeoxyribonuclease 7 large subunit\tK03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]" }, { "name":"SPSPH_020880 xseB; (GenBank) Exodeoxyribonuclease 7 small subunit\tK03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]" }, { "name":"SPSPH_022940 dnaE; (GenBank) DNA polymerase III subunit alpha\tK02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]" }, { "name":"SPSPH_017700 polC_1; (GenBank) DNA polymerase III PolC-type\tK03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]" }, { "name":"SPSPH_000020 dnaN; (GenBank) Beta sliding clamp\tK02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]" }, { "name":"SPSPH_019230 yqeN; (GenBank) putative protein YqeN\tK02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]" }, { "name":"SPSPH_001680 hypothetical protein\tK02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]" }, { "name":"SPSPH_037320 polC_2; (GenBank) DNA polymerase III PolC-type\tK02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]" }, { "name":"SPSPH_042760 ruvB_2; (GenBank) Holliday junction ATP-dependent DNA helicase RuvB\tK02343 dnaX; DNA polymerase III subunit gamma\/tau [EC:2.7.7.7]" }, { "name":"SPSPH_024390 ssbA_1; (GenBank) Single-stranded DNA-binding protein A\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_028210 ssbA_2; (GenBank) Single-stranded DNA-binding protein A\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_046200 Single-stranded DNA-binding protein\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_047420 ssb; (GenBank) Single-stranded DNA-binding protein\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_032690 recD2; (GenBank) ATP-dependent RecD-like DNA helicase\tK03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]" }, { "name":"SPSPH_018060 recA; (GenBank) Protein RecA\tK03553 recA; recombination protein RecA" }, { "name":"SPSPH_020240 ruvA; (GenBank) Holliday junction ATP-dependent DNA helicase RuvA\tK03550 ruvA; holliday junction DNA helicase RuvA" }, { "name":"SPSPH_020250 ruvB_1; (GenBank) Holliday junction ATP-dependent DNA helicase RuvB\tK03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]" }, { "name":"SPSPH_020230 ruvC; (GenBank) Crossover junction endodeoxyribonuclease RuvC\tK01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]" }, { "name":"SPSPH_021710 priA; (GenBank) primosomal protein N'\tK04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]" }, { "name":"SPSPH_000430 hypothetical protein\tK03546 sbcC; DNA repair protein SbcC\/Rad50" }, { "name":"SPSPH_000420 sbcD; (GenBank) Nuclease SbcCD subunit D\tK03547 sbcD; DNA repair protein SbcD\/Mre11" }, { "name":"SPSPH_004110 radA_1; (GenBank) DNA repair protein RadA\tK04485 radA; DNA repair protein RadA\/Sms" }, { "name":"SPSPH_000040 recF; (GenBank) DNA replication and repair protein RecF\tK03629 recF; DNA replication and repair protein RecF" }, { "name":"SPSPH_021490 recG; (GenBank) ATP-dependent DNA helicase RecG\tK03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]" }, { "name":"SPSPH_028030 hypothetical protein\tK03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]" }, { "name":"SPSPH_044720 hypothetical protein\tK03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]" }, { "name":"SPSPH_019550 recO; (GenBank) DNA repair protein RecO\tK03584 recO; DNA repair protein RecO (recombination protein O)" }, { "name":"SPSPH_042740 recR; (GenBank) Recombination protein RecR\tK06187 recR; recombination protein RecR" }, { "name":"SPSPH_020960 recN; (GenBank) DNA repair protein RecN\tK03631 recN; DNA repair protein RecN (Recombination protein N)" }, { "name":"SPSPH_000820 addA; (GenBank) ATP-dependent helicase\/nuclease subunit A\tK16898 addA; ATP-dependent helicase\/nuclease subunit A [EC:5.6.2.4 3.1.-.-]" }, { "name":"SPSPH_000810 addB; (GenBank) ATP-dependent helicase\/deoxyribonuclease subunit B\tK16899 addB; ATP-dependent helicase\/nuclease subunit B [EC:5.6.2.4 3.1.-.-]" }, { "name":"SPSPH_037210 cas1; (GenBank) CRISPR-associated endonuclease Cas1\tK15342 cas1; CRISP-associated protein Cas1" }, { "name":"SPSPH_024620 ku_1; (GenBank) Non-homologous end joining protein Ku\tK10979 ku; DNA end-binding protein Ku" }, { "name":"SPSPH_045050 ku_2; (GenBank) Non-homologous end joining protein Ku\tK10979 ku; DNA end-binding protein Ku" }, { "name":"SPSPH_024610 ligD_1; (GenBank) Multifunctional non-homologous end joining DNA repair protein LigD\tK01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]" }, { "name":"SPSPH_024630 ligD_2; (GenBank) Multifunctional non-homologous end joining protein LigD\tK01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]" }, { "name":"SPSPH_000200 gyrA; (GenBank) DNA gyrase subunit A\tK02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]" }, { "name":"SPSPH_000070 gyrB; (GenBank) DNA gyrase subunit B\tK02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]" }, { "name":"SPSPH_017120 topA; (GenBank) DNA topoisomerase 1\tK03168 topA; DNA topoisomerase I [EC:5.6.2.1]" }, { "name":"SPSPH_003300 hup; (GenBank) DNA-binding protein HU\tK03530 hupB; DNA-binding protein HU-beta" }, { "name":"SPSPH_023340 recQ; (GenBank) ATP-dependent DNA helicase RecQ\tK03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]" }, { "name":"SPSPH_039520 srmB; (GenBank) ATP-dependent RNA helicase SrmB\tK03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]" }, { "name":"SPSPH_043750 dinB1; (GenBank) DNA polymerase IV 1\tK02346 dinB; DNA polymerase IV [EC:2.7.7.7]" }, { "name":"SPSPH_021110 lexA; (GenBank) LexA repressor\tK01356 lexA; repressor LexA [EC:3.4.21.88]" }, { "name":"SPSPH_018070 recX; (GenBank) Regulatory protein RecX\tK03565 recX; regulatory protein" }, { "name":"SPSPH_023030 nrdZ; (GenBank) Vitamin B12-dependent ribonucleoside-diphosphate reductase\tK00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]" }, { "name":"SPSPH_017770 nrnA; (GenBank) Bifunctional oligoribonuclease and PAP phosphatase NrnA\tK06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]" } ] }, { "name":"03029 Mitochondrial biogenesis [BR:ssph03029]", "children":[ { "name":"SPSPH_017750 infB; (GenBank) Translation initiation factor IF-2\tK02519 infB; translation initiation factor IF-2" }, { "name":"SPSPH_019920 infC; (GenBank) Translation initiation factor IF-3\tK02520 infC; translation initiation factor IF-3" }, { "name":"SPSPH_017580 tsf; (GenBank) Elongation factor Ts\tK02357 tsf; elongation factor Ts" }, { "name":"SPSPH_004480 tuf_1; (GenBank) Elongation factor Tu\tK02358 tuf; elongation factor Tu" }, { "name":"SPSPH_004630 tuf_2; (GenBank) Elongation factor Tu\tK02358 tuf; elongation factor Tu" }, { "name":"SPSPH_004620 fusA_1; (GenBank) Elongation factor G\tK02355 fusA; elongation factor G" }, { "name":"SPSPH_022080 fusA_2; (GenBank) Elongation factor G\tK02355 fusA; elongation factor G" }, { "name":"SPSPH_019520 era; (GenBank) GTPase Era\tK03595 era; GTPase" }, { "name":"SPSPH_020120 tyrS_1; (GenBank) Tyrosine--tRNA ligase\tK01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]" }, { "name":"SPSPH_025170 tyrS_2; (GenBank) Tyrosine--tRNA ligase\tK01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]" }, { "name":"SPSPH_015360 leuS; (GenBank) Leucine--tRNA ligase\tK01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]" }, { "name":"SPSPH_020470 aspS; (GenBank) Aspartate--tRNA ligase\tK01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]" }, { "name":"SPSPH_002600 argS; (GenBank) Arginine--tRNA ligase\tK01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]" }, { "name":"SPSPH_026740 gatA; (GenBank) Glutamyl-tRNA(Gln) amidotransferase subunit A\tK02433 gatA; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]" }, { "name":"SPSPH_026730 gatB; (GenBank) Aspartyl\/glutamyl-tRNA(Asn\/Gln) amidotransferase subunit B\tK02434 gatB; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]" }, { "name":"SPSPH_026750 gatC; (GenBank) Aspartyl\/glutamyl-tRNA(Asn\/Gln) amidotransferase subunit C\tK02435 gatC; aspartyl-tRNA(Asn)\/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]" }, { "name":"SPSPH_024390 ssbA_1; (GenBank) Single-stranded DNA-binding protein A\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_028210 ssbA_2; (GenBank) Single-stranded DNA-binding protein A\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_046200 Single-stranded DNA-binding protein\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_047420 ssb; (GenBank) Single-stranded DNA-binding protein\tK03111 ssb; single-strand DNA-binding protein" }, { "name":"SPSPH_033470 bamA; (GenBank) Outer membrane protein assembly factor BamA\tK07277 SAM50; outer membrane protein insertion porin family" }, { "name":"SPSPH_011000 dnaK2; (GenBank) Chaperone protein dnaK2\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SPSPH_019330 dnaK; (GenBank) Chaperone protein DnaK\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SPSPH_019320 grpE; (GenBank) Protein GrpE\tK03687 GRPE; molecular chaperone GrpE" }, { "name":"SPSPH_012170 groL_1; (GenBank) 60 kDa chaperonin\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SPSPH_042250 groL_3; (GenBank) 60 kDa chaperonin\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SPSPH_012160 groS_1; (GenBank) 10 kDa chaperonin\tK04078 groES; chaperonin GroES" }, { "name":"SPSPH_042240 groS_2; (GenBank) 10 kDa chaperonin\tK04078 groES; chaperonin GroES" }, { "name":"SPSPH_019340 dnaJ_2; (GenBank) Chaperone protein DnaJ\tK03686 dnaJ; molecular chaperone DnaJ" }, { "name":"SPSPH_020520 iscS; (GenBank) Cysteine desulfurase IscS\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]" }, { "name":"SPSPH_046640 yidC2; (GenBank) Membrane protein insertase YidC 2\tK03217 yidC; YidC\/Oxa1 family membrane protein insertase" }, { "name":"SPSPH_022220 htpG; (GenBank) Chaperone protein HtpG\tK04079 HSP90A; molecular chaperone HtpG" } ] } ] }, { "name":"09183 Protein families: signaling and cellular processes", "children":[ { "name":"02000 Transporters [BR:ssph02000]", "children":[ { "name":"SPSPH_007670 Putative multidrug export ATP-binding\/permease protein\tK14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA\/YbtP [EC:7.-.-.-]" }, { "name":"SPSPH_007730 btuD_3; (GenBank) Vitamin B12 import ATP-binding protein BtuD\tK14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA\/YbtP [EC:7.-.-.-]" }, { "name":"SPSPH_007820 btuD_4; (GenBank) Vitamin B12 import ATP-binding protein BtuD\tK14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA\/YbtP [EC:7.-.-.-]" }, { "name":"SPSPH_008020 Putative multidrug export ATP-binding\/permease protein\tK14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA\/YbtP [EC:7.-.-.-]" }, { "name":"SPSPH_008080 irtA_1; (GenBank) Iron import ATP-binding\/permease protein IrtA\tK14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA\/YbtP [EC:7.-.-.-]" }, { "name":"SPSPH_035780 irtA_2; (GenBank) Iron import ATP-binding\/permease protein IrtA\tK14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA\/YbtP [EC:7.-.-.-]" }, { "name":"SPSPH_038360 btuD_10; (GenBank) Vitamin B12 import ATP-binding protein BtuD\tK14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA\/YbtP [EC:7.-.-.-]" }, { "name":"SPSPH_007680 btuD_2; (GenBank) Vitamin B12 import ATP-binding protein BtuD\tK14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB\/YbtQ [EC:7.-.-.-]" }, { "name":"SPSPH_007740 msbA_1; (GenBank) Lipid A export ATP-binding\/permease protein MsbA\tK14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB\/YbtQ [EC:7.-.-.-]" }, { "name":"SPSPH_007830 msbA_2; (GenBank) Lipid A export ATP-binding\/permease protein MsbA\tK14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB\/YbtQ [EC:7.-.-.-]" }, { "name":"SPSPH_008030 msbA_3; (GenBank) Lipid A export ATP-binding\/permease protein MsbA\tK14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB\/YbtQ [EC:7.-.-.-]" }, { "name":"SPSPH_008090 msbA_4; (GenBank) Lipid A export ATP-binding\/permease protein MsbA\tK14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB\/YbtQ [EC:7.-.-.-]" }, { "name":"SPSPH_035790 putative ABC transporter ATP-binding protein\tK14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB\/YbtQ [EC:7.-.-.-]" }, { "name":"SPSPH_038350 Putative multidrug export ATP-binding\/permease protein\tK14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB\/YbtQ [EC:7.-.-.-]" }, { "name":"SPSPH_033320 Putative multidrug export ATP-binding\/permease protein\tK11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]" }, { "name":"SPSPH_015350 putative ABC transporter ATP-binding protein\tK18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump" }, { "name":"SPSPH_015340 putative ABC transporter ATP-binding protein\tK18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump" }, { "name":"SPSPH_001370 putative ABC transporter ATP-binding\/permease protein\tK16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC" }, { "name":"SPSPH_001380 cydD; (GenBank) ATP-binding\/permease protein CydD\tK16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD" }, { "name":"SPSPH_039850 expZ; (GenBank) Nucleotide-binding protein ExpZ\tK19350 lsa; lincosamide and streptogramin A transport system ATP-binding\/permease protein" }, { "name":"SPSPH_001760 bacA_1; (GenBank) Vitamin B12 transport ATP-binding protein BacA\tK02471 bacA; vitamin B12\/bleomycin\/antimicrobial peptide transport system ATP-binding\/permease protein" }, { "name":"SPSPH_007040 bacA_2; (GenBank) Vitamin B12 transport ATP-binding protein BacA\tK02471 bacA; vitamin B12\/bleomycin\/antimicrobial peptide transport system ATP-binding\/permease protein" }, { "name":"SPSPH_023570 ettA_1; (GenBank) Energy-dependent translational throttle protein EttA\tK15738 uup; ABC transport system ATP-binding\/permease protein" }, { "name":"SPSPH_008400 sbp; (GenBank) Sulfate-binding protein\tK23163 sbp; sulfate\/thiosulfate transport system substrate-binding protein" }, { "name":"SPSPH_008410 cysT; (GenBank) Sulfate transport system permease protein CysT\tK02046 cysU; sulfate\/thiosulfate transport system permease protein" }, { "name":"SPSPH_008420 cysW; (GenBank) Sulfate transport system permease protein CysW\tK02047 cysW; sulfate\/thiosulfate transport system permease protein" }, { "name":"SPSPH_008430 cysA; (GenBank) Sulfate\/thiosulfate import ATP-binding protein CysA\tK02045 cysA; sulfate\/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]" }, { "name":"SPSPH_008790 modA_1; (GenBank) Molybdate-binding protein ModA\tK02020 modA; molybdate transport system substrate-binding protein" }, { "name":"SPSPH_023830 modA_2; (GenBank) Molybdate-binding protein ModA\tK02020 modA; molybdate transport system substrate-binding protein" }, { "name":"SPSPH_023840 modA_3; (GenBank) Molybdate-binding protein ModA\tK02020 modA; molybdate transport system substrate-binding protein" }, { "name":"SPSPH_023820 modB; (GenBank) Molybdenum transport system permease protein ModB\tK02018 modB; molybdate transport system permease protein" }, { "name":"SPSPH_023810 potA; (GenBank) Spermidine\/putrescine import ATP-binding protein PotA\tK02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]" }, { "name":"SPSPH_014460 tupA; (GenBank) Tungstate-binding protein TupA\tK05772 tupA; tungstate transport system substrate-binding protein" }, { "name":"SPSPH_014470 tupB; (GenBank) Tungstate uptake system permease protein TupB\tK05773 tupB; tungstate transport system permease protein" }, { "name":"SPSPH_014480 btuD_7; (GenBank) Vitamin B12 import ATP-binding protein BtuD\tK06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]" }, { "name":"SPSPH_008690 nrtD_2; (GenBank) Nitrate import ATP-binding protein NrtD\tK15579 nrtD; nitrate\/nitrite transport system ATP-binding protein" }, { "name":"SPSPH_009500 nrtD_3; (GenBank) Nitrate import ATP-binding protein NrtD\tK15579 nrtD; nitrate\/nitrite transport system ATP-binding protein" }, { "name":"SPSPH_029640 tauA; (GenBank) Taurine-binding periplasmic protein\tK15551 tauA; taurine transport system substrate-binding protein" }, { "name":"SPSPH_029650 ssuC_7; (GenBank) Putative aliphatic sulfonates transport permease protein SsuC\tK15552 tauC; taurine transport system permease protein" }, { "name":"SPSPH_008620 hypothetical protein\tK15553 ssuA; sulfonate transport system substrate-binding protein" }, { "name":"SPSPH_008640 hypothetical protein\tK15553 ssuA; sulfonate transport system substrate-binding protein" }, { "name":"SPSPH_008700 hypothetical protein\tK15553 ssuA; sulfonate transport system substrate-binding protein" }, { "name":"SPSPH_009510 hypothetical protein\tK15553 ssuA; sulfonate transport system substrate-binding protein" }, { "name":"SPSPH_009940 hypothetical protein\tK15553 ssuA; sulfonate transport system substrate-binding protein" }, { "name":"SPSPH_029580 ssuA_3; (GenBank) Putative aliphatic sulfonates-binding protein\tK15553 ssuA; sulfonate transport system substrate-binding protein" }, { "name":"SPSPH_008600 hypothetical protein\tK15554 ssuC; sulfonate transport system permease protein" }, { "name":"SPSPH_008650 ssuC_2; (GenBank) Putative aliphatic sulfonates transport permease protein SsuC\tK15554 ssuC; sulfonate transport system permease protein" }, { "name":"SPSPH_008710 hypothetical protein\tK15554 ssuC; sulfonate transport system permease protein" }, { "name":"SPSPH_009490 cmpB; (GenBank) Bicarbonate transport system permease protein CmpB\tK15554 ssuC; sulfonate transport system permease protein" }, { "name":"SPSPH_009920 hypothetical protein\tK15554 ssuC; sulfonate transport system permease protein" }, { "name":"SPSPH_029600 ssuC_6; (GenBank) Putative aliphatic sulfonates transport permease protein SsuC\tK15554 ssuC; sulfonate transport system permease protein" }, { "name":"SPSPH_008610 ssuB_2; (GenBank) Aliphatic sulfonates import ATP-binding protein SsuB\tK15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]" }, { "name":"SPSPH_009930 ssuB_3; (GenBank) Aliphatic sulfonates import ATP-binding protein SsuB\tK15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]" }, { "name":"SPSPH_029590 ssuB_5; (GenBank) Aliphatic sulfonates import ATP-binding protein SsuB\tK15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]" }, { "name":"SPSPH_029630 tauB; (GenBank) Taurine import ATP-binding protein TauB\tK15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]" }, { "name":"SPSPH_018020 hypothetical protein\tK02012 afuA; iron(III) transport system substrate-binding protein" }, { "name":"SPSPH_029380 hypothetical protein\tK02012 afuA; iron(III) transport system substrate-binding protein" }, { "name":"SPSPH_029360 hypothetical protein\tK02011 afuB; iron(III) transport system permease protein" }, { "name":"SPSPH_029370 msiK; (GenBank) Diacetylchitobiose uptake system ATP-binding protein MsiK\tK02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]" }, { "name":"SPSPH_006030 opuCC; (GenBank) Glycine betaine\/carnitine\/choline-binding protein OpuCC\tK05845 opuC; osmoprotectant transport system substrate-binding protein" }, { "name":"SPSPH_006010 opuBB; (GenBank) Choline transport system permease protein OpuBB\tK05846 opuBD; osmoprotectant transport system permease protein" }, { "name":"SPSPH_006020 opuCB; (GenBank) Carnitine transport permease protein OpuCB\tK05846 opuBD; osmoprotectant transport system permease protein" }, { "name":"SPSPH_006040 opuCA; (GenBank) Carnitine transport ATP-binding protein OpuCA\tK05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]" }, { "name":"SPSPH_005440 ssuA_1; (GenBank) Putative aliphatic sulfonates-binding protein\tK02051 ABC.SN.S; NitT\/TauT family transport system substrate-binding protein" }, { "name":"SPSPH_008220 hypothetical protein\tK02051 ABC.SN.S; NitT\/TauT family transport system substrate-binding protein" }, { "name":"SPSPH_022300 ssuA_2; (GenBank) Putative aliphatic sulfonates-binding protein\tK02051 ABC.SN.S; NitT\/TauT family transport system substrate-binding protein" }, { "name":"SPSPH_008230 nrtB; (GenBank) Nitrate import permease protein NrtB\tK02050 ABC.SN.P; NitT\/TauT family transport system permease protein" }, { "name":"SPSPH_009700 ssuC_3; (GenBank) Putative aliphatic sulfonates transport permease protein SsuC\tK02050 ABC.SN.P; NitT\/TauT family transport system permease protein" }, { "name":"SPSPH_009710 ssuC_4; (GenBank) Putative aliphatic sulfonates transport permease protein SsuC\tK02050 ABC.SN.P; NitT\/TauT family transport system permease protein" }, { "name":"SPSPH_005450 ssuB_1; (GenBank) Aliphatic sulfonates import ATP-binding protein SsuB\tK02049 ABC.SN.A; NitT\/TauT family transport system ATP-binding protein" }, { "name":"SPSPH_008240 nrtD_1; (GenBank) Nitrate import ATP-binding protein NrtD\tK02049 ABC.SN.A; NitT\/TauT family transport system ATP-binding protein" }, { "name":"SPSPH_008630 cmpD; (GenBank) Bicarbonate transport ATP-binding protein CmpD\tK02049 ABC.SN.A; NitT\/TauT family transport system ATP-binding protein" }, { "name":"SPSPH_010110 btuD_5; (GenBank) Vitamin B12 import ATP-binding protein BtuD\tK02049 ABC.SN.A; NitT\/TauT family transport system ATP-binding protein" }, { "name":"SPSPH_022320 ssuB_4; (GenBank) Aliphatic sulfonates import ATP-binding protein SsuB\tK02049 ABC.SN.A; NitT\/TauT family transport system ATP-binding protein" }, { "name":"SPSPH_033520 hypothetical protein\tK02067 mlaD; phospholipid\/cholesterol\/gamma-HCH transport system substrate-binding protein" }, { "name":"SPSPH_033540 mlaE; (GenBank) Intermembrane phospholipid transport system permease protein MlaE\tK02066 mlaE; phospholipid\/cholesterol\/gamma-HCH transport system permease protein" }, { "name":"SPSPH_033530 mkl; (GenBank) putative ribonucleotide transport ATP-binding protein mkl\tK02065 mlaF; phospholipid\/cholesterol\/gamma-HCH transport system ATP-binding protein" }, { "name":"SPSPH_003510 pstS1; (GenBank) Phosphate-binding protein PstS 1\tK02040 pstS; phosphate transport system substrate-binding protein" }, { "name":"SPSPH_037140 pstS; (GenBank) Phosphate-binding protein PstS\tK02040 pstS; phosphate transport system substrate-binding protein" }, { "name":"SPSPH_003520 hypothetical protein\tK02037 pstC; phosphate transport system permease protein" }, { "name":"SPSPH_037130 pstC; (GenBank) Phosphate transport system permease protein PstC\tK02037 pstC; phosphate transport system permease protein" }, { "name":"SPSPH_003530 hypothetical protein\tK02038 pstA; phosphate transport system permease protein" }, { "name":"SPSPH_037120 hypothetical protein\tK02038 pstA; phosphate transport system permease protein" }, { "name":"SPSPH_003480 pstB3; (GenBank) Phosphate import ATP-binding protein PstB 3\tK02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]" }, { "name":"SPSPH_037110 pstB; (GenBank) Phosphate import ATP-binding protein PstB\tK02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]" }, { "name":"SPSPH_008550 phnD2; (GenBank) putative ABC transporter phosphonate\/phosphite binding protein PhnD2\tK02044 phnD; phosphonate transport system substrate-binding protein" }, { "name":"SPSPH_008570 phnE; (GenBank) Phosphate-import permease protein PhnE\tK02042 phnE; phosphonate transport system permease protein" }, { "name":"SPSPH_008560 ftsE_1; (GenBank) Cell division ATP-binding protein FtsE\tK02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]" }, { "name":"SPSPH_000790 glnH_1; (GenBank) Glutamine-binding periplasmic protein\tK10036 glnH; glutamine transport system substrate-binding protein" }, { "name":"SPSPH_030900 glnH_3; (GenBank) Glutamine-binding periplasmic protein\tK10036 glnH; glutamine transport system substrate-binding protein" }, { "name":"SPSPH_030890 glnP_3; (GenBank) Glutamine transport system permease protein GlnP\tK10037 glnP; glutamine transport system permease protein" }, { "name":"SPSPH_030880 glnQ_4; (GenBank) Glutamine transport ATP-binding protein GlnQ\tK10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"SPSPH_006470 peb1A; (GenBank) Major cell-binding factor\tK10039 peb1A; aspartate\/glutamate\/glutamine transport system substrate-binding protein" }, { "name":"SPSPH_006450 glnP_1; (GenBank) putative glutamine ABC transporter permease protein GlnP\tK10040 peb1B; aspartate\/glutamate\/glutamine transport system permease protein" }, { "name":"SPSPH_006460 glnM; (GenBank) putative glutamine ABC transporter permease protein GlnM\tK10040 peb1B; aspartate\/glutamate\/glutamine transport system permease protein" }, { "name":"SPSPH_006480 glnQ_1; (GenBank) Glutamine transport ATP-binding protein GlnQ\tK10041 peb1C; aspartate\/glutamate\/glutamine transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"SPSPH_029310 tcyK; (GenBank) L-cystine-binding protein TcyK\tK16957 tcyK; L-cystine transport system substrate-binding protein" }, { "name":"SPSPH_029280 tcyN; (GenBank) L-cystine import ATP-binding protein TcyN\tK16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"SPSPH_002480 braC_1; (GenBank) Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SPSPH_010170 braC_2; (GenBank) Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SPSPH_021990 Leu\/Ile\/Val-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SPSPH_038570 livK_1; (GenBank) Leucine-specific-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SPSPH_046340 livK_2; (GenBank) Leucine-specific-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SPSPH_046350 braC_3; (GenBank) Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein\tK01999 livK; branched-chain amino acid transport system substrate-binding protein" }, { "name":"SPSPH_046330 livH; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH\tK01997 livH; branched-chain amino acid transport system permease protein" }, { "name":"SPSPH_046320 hypothetical protein\tK01998 livM; branched-chain amino acid transport system permease protein" }, { "name":"SPSPH_046310 lptB_2; (GenBank) Lipopolysaccharide export system ATP-binding protein LptB\tK01995 livG; branched-chain amino acid transport system ATP-binding protein" }, { "name":"SPSPH_046300 livF; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF\tK01996 livF; branched-chain amino acid transport system ATP-binding protein" }, { "name":"SPSPH_000350 metQ_1; (GenBank) D-methionine-binding lipoprotein MetQ\tK02073 metQ; D-methionine transport system substrate-binding protein" }, { "name":"SPSPH_025110 metQ_2; (GenBank) Methionine-binding lipoprotein MetQ\tK02073 metQ; D-methionine transport system substrate-binding protein" }, { "name":"SPSPH_027540 metQ_3; (GenBank) D-methionine-binding lipoprotein MetQ\tK02073 metQ; D-methionine transport system substrate-binding protein" }, { "name":"SPSPH_000330 metI; (GenBank) D-methionine transport system permease protein MetI\tK02072 metI; D-methionine transport system permease protein" }, { "name":"SPSPH_025120 metP; (GenBank) Methionine import system permease protein MetP\tK02072 metI; D-methionine transport system permease protein" }, { "name":"SPSPH_000320 metN; (GenBank) Methionine import ATP-binding protein MetN\tK02071 metN; D-methionine transport system ATP-binding protein" }, { "name":"SPSPH_025130 metN2; (GenBank) Methionine import ATP-binding protein MetN 2\tK02071 metN; D-methionine transport system ATP-binding protein" }, { "name":"SPSPH_022950 hypothetical protein\tK01989 K01989; putative tryptophan\/tyrosine transport system substrate-binding protein" }, { "name":"SPSPH_011170 hisJ; (GenBank) putative histidine-binding protein\tK17073 lysX1; putative lysine transport system substrate-binding protein" }, { "name":"SPSPH_011180 hypothetical protein\tK17073 lysX1; putative lysine transport system substrate-binding protein" }, { "name":"SPSPH_011190 glnQ_3; (GenBank) Glutamine transport ATP-binding protein GlnQ\tK17076 lysY; putative lysine transport system ATP-binding protein" }, { "name":"SPSPH_029290 yxeN_1; (GenBank) putative amino-acid permease protein YxeN\tK16962 yxeN; putative S-methylcysteine transport system permease protein" }, { "name":"SPSPH_029300 yxeN_2; (GenBank) putative amino-acid permease protein YxeN\tK16962 yxeN; putative S-methylcysteine transport system permease protein" }, { "name":"SPSPH_009640 glnH_2; (GenBank) ABC transporter glutamine-binding protein GlnH\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"SPSPH_034920 fliY; (GenBank) L-cystine-binding protein FliY\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"SPSPH_035760 glnH_4; (GenBank) Glutamine-binding periplasmic protein\tK02030 ABC.PA.S; polar amino acid transport system substrate-binding protein" }, { "name":"SPSPH_009660 glnP_2; (GenBank) putative glutamine ABC transporter permease protein GlnP\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"SPSPH_009670 yecS; (GenBank) L-cystine transport system permease protein YecS\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"SPSPH_034910 artQ; (GenBank) Arginine transport system permease protein ArtQ\tK02029 ABC.PA.P; polar amino acid transport system permease protein" }, { "name":"SPSPH_009650 glnQ_2; (GenBank) Glutamine transport ATP-binding protein GlnQ\tK02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"SPSPH_033380 glnQ_5; (GenBank) Glutamine transport ATP-binding protein GlnQ\tK02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"SPSPH_034900 artM; (GenBank) Arginine transport ATP-binding protein ArtM\tK02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"SPSPH_043930 glnQ_6; (GenBank) Glutamine transport ATP-binding protein GlnQ\tK02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]" }, { "name":"SPSPH_036620 oppF_2; (GenBank) Oligopeptide transport ATP-binding protein OppF\tK10823 oppF; oligopeptide transport system ATP-binding protein" }, { "name":"SPSPH_006270 nikA_1; (GenBank) Nickel-binding periplasmic protein\tK15584 nikA; nickel transport system substrate-binding protein" }, { "name":"SPSPH_036130 nikA_2; (GenBank) Nickel-binding periplasmic protein\tK15584 nikA; nickel transport system substrate-binding protein" }, { "name":"SPSPH_006280 nikB_2; (GenBank) Nickel transport system permease protein NikB\tK15585 nikB; nickel transport system permease protein" }, { "name":"SPSPH_036120 nikB_3; (GenBank) Nickel transport system permease protein NikB\tK15585 nikB; nickel transport system permease protein" }, { "name":"SPSPH_006290 cntC; (GenBank) Metal-staphylopine import system permease protein CntC\tK15586 nikC; nickel transport system permease protein" }, { "name":"SPSPH_036110 nikC; (GenBank) Nickel transport system permease protein NikC\tK15586 nikC; nickel transport system permease protein" }, { "name":"SPSPH_006300 cntD_1; (GenBank) Metal-staphylopine import system ATP-binding protein CntD\tK15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]" }, { "name":"SPSPH_006310 cntF; (GenBank) Metal-staphylopine import system ATP-binding protein CntF\tK10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]" }, { "name":"SPSPH_036090 gsiA_1; (GenBank) Glutathione import ATP-binding protein GsiA\tK10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]" }, { "name":"SPSPH_036650 gsiC_3; (GenBank) Glutathione transport system permease protein GsiC\tK13890 gsiC; glutathione transport system permease protein" }, { "name":"SPSPH_006530 appA_1; (GenBank) Oligopeptide-binding protein AppA\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"SPSPH_022470 appA_2; (GenBank) Oligopeptide-binding protein AppA\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"SPSPH_025250 appA_3; (GenBank) Oligopeptide-binding protein AppA\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"SPSPH_036410 appA_4; (GenBank) Oligopeptide-binding protein AppA\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"SPSPH_036470 dppA; (GenBank) Periplasmic dipeptide transport protein\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"SPSPH_036610 appA_5; (GenBank) Oligopeptide-binding protein AppA\tK02035 ABC.PE.S; peptide\/nickel transport system substrate-binding protein" }, { "name":"SPSPH_003000 nikB_1; (GenBank) Nickel transport system permease protein NikB\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"SPSPH_006540 dppB_1; (GenBank) Dipeptide transport system permease protein DppB\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"SPSPH_025240 gsiC_1; (GenBank) Glutathione transport system permease protein GsiC\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"SPSPH_036400 dppB_2; (GenBank) Dipeptide transport system permease protein DppB\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"SPSPH_036480 gsiC_2; (GenBank) Glutathione transport system permease protein GsiC\tK02033 ABC.PE.P; peptide\/nickel transport system permease protein" }, { "name":"SPSPH_006550 dppC_1; (GenBank) Dipeptide transport system permease protein DppC\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"SPSPH_025230 dppC_2; (GenBank) Dipeptide transport system permease protein DppC\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"SPSPH_036390 oppC; (GenBank) Oligopeptide transport system permease protein OppC\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"SPSPH_036490 gsiD_1; (GenBank) Glutathione transport system permease protein GsiD\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"SPSPH_036640 gsiD_2; (GenBank) Glutathione transport system permease protein GsiD\tK02034 ABC.PE.P1; peptide\/nickel transport system permease protein" }, { "name":"SPSPH_003020 oppD_1; (GenBank) Oligopeptide transport ATP-binding protein OppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_006560 oppD_2; (GenBank) Oligopeptide transport ATP-binding protein OppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_025220 putative ABC transporter ATP-binding protein\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_036100 cntD_2; (GenBank) Metal-staphylopine import system ATP-binding protein CntD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_036380 ddpD; (GenBank) putative D,D-dipeptide transport ATP-binding protein DdpD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_036500 gsiA_2; (GenBank) Glutathione import ATP-binding protein GsiA\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_036630 oppD_3; (GenBank) Oligopeptide transport ATP-binding protein OppD\tK02031 ddpD; peptide\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_003030 oppF_1; (GenBank) Oligopeptide transport ATP-binding protein OppF\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_006570 nikE_1; (GenBank) Nickel import system ATP-binding protein NikE\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_025210 nikE_2; (GenBank) Nickel import system ATP-binding protein NikE\tK02032 ddpF; peptide\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_038810 feuB; (GenBank) Iron-uptake system permease protein FeuB\tK25288 fhuB; ferric hydroxamate\/heme transport system permease protein" }, { "name":"SPSPH_038820 feuC; (GenBank) Iron-uptake system permease protein FeuC\tK25289 fhuG; ferric hydroxamate\/heme transport system permease protein" }, { "name":"SPSPH_038830 yusV_1; (GenBank) putative siderophore transport system ATP-binding protein YusV\tK25290 fhuA; ferric hydroxamate\/heme transport system ATP-binding protein [EC:7.2.2.16]" }, { "name":"SPSPH_042430 yusV_2; (GenBank) putative siderophore transport system ATP-binding protein YusV\tK25290 fhuA; ferric hydroxamate\/heme transport system ATP-binding protein [EC:7.2.2.16]" }, { "name":"SPSPH_010280 hypothetical protein\tK02016 ABC.FEV.S; iron complex transport system substrate-binding protein" }, { "name":"SPSPH_010340 hypothetical protein\tK02016 ABC.FEV.S; iron complex transport system substrate-binding protein" }, { "name":"SPSPH_011080 hypothetical protein\tK02016 ABC.FEV.S; iron complex transport system substrate-binding protein" }, { "name":"SPSPH_028090 hypothetical protein\tK02016 ABC.FEV.S; iron complex transport system substrate-binding protein" }, { "name":"SPSPH_038370 hypothetical protein\tK02016 ABC.FEV.S; iron complex transport system substrate-binding protein" }, { "name":"SPSPH_038800 yfmC_2; (GenBank) Fe(3+)-citrate-binding protein YfmC\tK02016 ABC.FEV.S; iron complex transport system substrate-binding protein" }, { "name":"SPSPH_042450 btuF_2; (GenBank) Vitamin B12-binding protein\tK02016 ABC.FEV.S; iron complex transport system substrate-binding protein" }, { "name":"SPSPH_042480 btuF_3; (GenBank) Vitamin B12-binding protein\tK02016 ABC.FEV.S; iron complex transport system substrate-binding protein" }, { "name":"SPSPH_010290 putative ABC transporter permease protein\tK02015 ABC.FEV.P; iron complex transport system permease protein" }, { "name":"SPSPH_010350 putative ABC transporter permease protein\tK02015 ABC.FEV.P; iron complex transport system permease protein" }, { "name":"SPSPH_011100 btuC_1; (GenBank) Vitamin B12 import system permease protein BtuC\tK02015 ABC.FEV.P; iron complex transport system permease protein" }, { "name":"SPSPH_028080 putative ABC transporter permease protein\tK02015 ABC.FEV.P; iron complex transport system permease protein" }, { "name":"SPSPH_038320 btuC_2; (GenBank) Vitamin B12 import system permease protein BtuC\tK02015 ABC.FEV.P; iron complex transport system permease protein" }, { "name":"SPSPH_042090 hmuU_3; (GenBank) Hemin transport system permease protein HmuU\tK02015 ABC.FEV.P; iron complex transport system permease protein" }, { "name":"SPSPH_042440 hmuU_4; (GenBank) Hemin transport system permease protein HmuU\tK02015 ABC.FEV.P; iron complex transport system permease protein" }, { "name":"SPSPH_010320 putative ABC transporter ATP-binding protein\tK02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]" }, { "name":"SPSPH_010360 putative ABC transporter ATP-binding protein\tK02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]" }, { "name":"SPSPH_011090 fpuC; (GenBank) Petrobactin import ATP-binding protein FpuC\tK02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]" }, { "name":"SPSPH_028070 putative ABC transporter ATP-binding protein\tK02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]" }, { "name":"SPSPH_038310 fepC; (GenBank) Ferric enterobactin transport ATP-binding protein FepC\tK02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]" }, { "name":"SPSPH_042080 yclP; (GenBank) Petrobactin import ATP-binding protein YclP\tK02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]" }, { "name":"SPSPH_006420 hypothetical protein\tK25034 btuF; cobalamin transport system substrate-binding protein" }, { "name":"SPSPH_006930 yfmC_1; (GenBank) Fe(3+)-citrate-binding protein YfmC\tK25034 btuF; cobalamin transport system substrate-binding protein" }, { "name":"SPSPH_007050 hypothetical protein\tK25034 btuF; cobalamin transport system substrate-binding protein" }, { "name":"SPSPH_042070 btuF_1; (GenBank) Vitamin B12-binding protein\tK25034 btuF; cobalamin transport system substrate-binding protein" }, { "name":"SPSPH_006940 hmuU_1; (GenBank) Hemin transport system permease protein HmuU\tK25027 btuC; cobalamin transport system permease protein" }, { "name":"SPSPH_007110 hmuU_2; (GenBank) Hemin transport system permease protein HmuU\tK25027 btuC; cobalamin transport system permease protein" }, { "name":"SPSPH_007120 btuD_1; (GenBank) Vitamin B12 import ATP-binding protein BtuD\tK25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]" }, { "name":"SPSPH_015500 znuA; (GenBank) High-affinity zinc uptake system binding-protein ZnuA\tK09815 znuA; zinc transport system substrate-binding protein" }, { "name":"SPSPH_015530 znuB; (GenBank) High-affinity zinc uptake system membrane protein ZnuB\tK09816 znuB; zinc transport system permease protein" }, { "name":"SPSPH_015520 znuC; (GenBank) High-affinity zinc uptake system ATP-binding protein ZnuC\tK09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]" }, { "name":"SPSPH_025540 troA; (GenBank) Periplasmic zinc-binding protein TroA\tK11707 troA; manganese\/zinc\/iron transport system substrate-binding protein" }, { "name":"SPSPH_025520 mntC; (GenBank) Manganese transport system membrane protein MntC\tK11708 troC; manganese\/zinc\/iron transport system permease protein" }, { "name":"SPSPH_025510 hypothetical protein\tK11709 troD; manganese\/zinc\/iron transport system permease protein" }, { "name":"SPSPH_025530 mntB; (GenBank) Manganese transport system ATP-binding protein MntB\tK11710 troB; manganese\/zinc\/iron transport system ATP- binding protein [EC:7.2.2.5]" }, { "name":"SPSPH_036430 hypothetical protein\tK02008 cbiQ; cobalt\/nickel transport system permease protein" }, { "name":"SPSPH_036420 cbiM; (GenBank) Cobalt transport protein CbiM\tK02007 cbiM; cobalt\/nickel transport system permease protein" }, { "name":"SPSPH_036440 ecfA3; (GenBank) Energy-coupling factor transporter ATP-binding protein EcfA3\tK02006 cbiO; cobalt\/nickel transport system ATP-binding protein" }, { "name":"SPSPH_003860 bioY; (GenBank) Biotin transporter BioY\tK03523 bioY; biotin transport system substrate-specific component" }, { "name":"SPSPH_007650 hypothetical protein\tK16926 htsT; energy-coupling factor transport system substrate-specific component" }, { "name":"SPSPH_007690 hypothetical protein\tK16926 htsT; energy-coupling factor transport system substrate-specific component" }, { "name":"SPSPH_007790 hypothetical protein\tK16926 htsT; energy-coupling factor transport system substrate-specific component" }, { "name":"SPSPH_007870 hypothetical protein\tK16926 htsT; energy-coupling factor transport system substrate-specific component" }, { "name":"SPSPH_000620 ecfT_1; (GenBank) Energy-coupling factor transporter transmembrane protein EcfT\tK16785 ecfT; energy-coupling factor transport system permease protein" }, { "name":"SPSPH_004970 ecfT_2; (GenBank) Energy-coupling factor transporter transmembrane protein EcfT\tK16785 ecfT; energy-coupling factor transport system permease protein" }, { "name":"SPSPH_006400 ecfT_3; (GenBank) Energy-coupling factor transporter transmembrane protein EcfT\tK16785 ecfT; energy-coupling factor transport system permease protein" }, { "name":"SPSPH_007630 ecfT_4; (GenBank) Energy-coupling factor transporter transmembrane protein EcfT\tK16785 ecfT; energy-coupling factor transport system permease protein" }, { "name":"SPSPH_007700 ecfT_5; (GenBank) Energy-coupling factor transporter transmembrane protein EcfT\tK16785 ecfT; energy-coupling factor transport system permease protein" }, { "name":"SPSPH_007880 ecfT_6; (GenBank) Energy-coupling factor transporter transmembrane protein EcfT\tK16785 ecfT; energy-coupling factor transport system permease protein" }, { "name":"SPSPH_004950 ecfA1_2; (GenBank) Energy-coupling factor transporter ATP-binding protein EcfA1\tK16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]" }, { "name":"SPSPH_000610 ecfA2_1; (GenBank) Energy-coupling factor transporter ATP-binding protein EcfA2\tK16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]" }, { "name":"SPSPH_004960 ecfA2_2; (GenBank) Energy-coupling factor transporter ATP-binding protein EcfA2\tK16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]" }, { "name":"SPSPH_000600 ecfA1_1; (GenBank) Energy-coupling factor transporter ATP-binding protein EcfA1\tK01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]" }, { "name":"SPSPH_006390 ykoD_1; (GenBank) Putative HMP\/thiamine import ATP-binding protein YkoD\tK01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]" }, { "name":"SPSPH_007640 ykoD_2; (GenBank) Putative HMP\/thiamine import ATP-binding protein YkoD\tK01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]" }, { "name":"SPSPH_007710 ykoD_3; (GenBank) Putative HMP\/thiamine import ATP-binding protein YkoD\tK01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]" }, { "name":"SPSPH_033020 hypothetical protein\tK09690 wzm; homopolymeric O-antigen transport system permease protein" }, { "name":"SPSPH_033010 btuD_9; (GenBank) Vitamin B12 import ATP-binding protein BtuD\tK09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]" }, { "name":"SPSPH_033220 lptG; (GenBank) Lipopolysaccharide export system permease protein LptG\tK11720 lptG; lipopolysaccharide export system permease protein" }, { "name":"SPSPH_033230 lptB_1; (GenBank) Lipopolysaccharide export system ATP-binding protein LptB\tK06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]" }, { "name":"SPSPH_042350 yadH_4; (GenBank) Inner membrane transport permease YadH\tK09694 nodJ; lipooligosaccharide transport system permease protein" }, { "name":"SPSPH_042360 lnrL_4; (GenBank) Linearmycin resistance ATP-binding protein LnrL\tK09695 nodI; lipooligosaccharide transport system ATP-binding protein" }, { "name":"SPSPH_000870 ybhS; (GenBank) putative multidrug ABC transporter permease YbhS\tK25181 ybhS; drug efflux transport system permease protein" }, { "name":"SPSPH_027760 ybhR_1; (GenBank) putative multidrug ABC transporter permease YbhR\tK25181 ybhS; drug efflux transport system permease protein" }, { "name":"SPSPH_000850 ybhF_1; (GenBank) putative multidrug ABC transporter ATP-binding protein YbhF\tK25182 ybhF; drug efflux transport system ATP-binding protein" }, { "name":"SPSPH_000860 ybhF_2; (GenBank) putative multidrug ABC transporter ATP-binding protein YbhF\tK25182 ybhF; drug efflux transport system ATP-binding protein" }, { "name":"SPSPH_000840 hypothetical protein\tK25183 ybhG; membrane fusion protein YbhG" }, { "name":"SPSPH_034230 ccsA; (GenBank) Cytochrome c biogenesis protein CcsA\tK02195 ccmC; heme exporter protein C" }, { "name":"SPSPH_034240 hypothetical protein\tK02194 ccmB; heme exporter protein B" }, { "name":"SPSPH_034250 lnrL_2; (GenBank) Linearmycin resistance ATP-binding protein LnrL\tK02193 ccmA; heme exporter protein A [EC:7.6.2.5]" }, { "name":"SPSPH_030710 ftsX; (GenBank) Cell division protein FtsX\tK09811 ftsX; cell division transport system permease protein" }, { "name":"SPSPH_030720 ftsE_2; (GenBank) Cell division ATP-binding protein FtsE\tK09812 ftsE; cell division transport system ATP-binding protein" }, { "name":"SPSPH_027770 ybhR_2; (GenBank) putative multidrug ABC transporter permease YbhR\tK01992 ABC-2.P; ABC-2 type transport system permease protein" }, { "name":"SPSPH_006630 lnrL_1; (GenBank) Linearmycin resistance ATP-binding protein LnrL\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SPSPH_006970 drrA; (GenBank) Daunorubicin\/doxorubicin resistance ATP-binding protein DrrA\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SPSPH_042220 lnrL_3; (GenBank) Linearmycin resistance ATP-binding protein LnrL\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SPSPH_042420 btuD_11; (GenBank) Vitamin B12 import ATP-binding protein BtuD\tK01990 ABC-2.A; ABC-2 type transport system ATP-binding protein" }, { "name":"SPSPH_005730 macB_1; (GenBank) Macrolide export ATP-binding\/permease protein MacB\tK02004 ABC.CD.P; putative ABC transport system permease protein" }, { "name":"SPSPH_007770 hypothetical protein\tK02004 ABC.CD.P; putative ABC transport system permease protein" }, { "name":"SPSPH_008050 hypothetical protein\tK02004 ABC.CD.P; putative ABC transport system permease protein" }, { "name":"SPSPH_010040 hypothetical protein\tK02004 ABC.CD.P; putative ABC transport system permease protein" }, { "name":"SPSPH_005720 yknY_1; (GenBank) putative ABC transporter ATP-binding protein YknY\tK02003 ABC.CD.A; putative ABC transport system ATP-binding protein" }, { "name":"SPSPH_007760 yknY_2; (GenBank) putative ABC transporter ATP-binding protein YknY\tK02003 ABC.CD.A; putative ABC transport system ATP-binding protein" }, { "name":"SPSPH_008040 yknY_3; (GenBank) putative ABC transporter ATP-binding protein YknY\tK02003 ABC.CD.A; putative ABC transport system ATP-binding protein" }, { "name":"SPSPH_010050 macB_2; (GenBank) Macrolide export ATP-binding\/permease protein MacB\tK02003 ABC.CD.A; putative ABC transport system ATP-binding protein" }, { "name":"SPSPH_028950 sdcS; (GenBank) Sodium-dependent dicarboxylate transporter SdcS\tK14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2\/3\/5" }, { "name":"SPSPH_007090 norM_1; (GenBank) Multidrug resistance protein NorM\tK26939 norM; MATE family, multidrug efflux pump" }, { "name":"SPSPH_024320 mdtK; (GenBank) Multidrug resistance protein MdtK\tK26939 norM; MATE family, multidrug efflux pump" }, { "name":"SPSPH_036020 norM_2; (GenBank) Multidrug resistance protein NorM\tK26939 norM; MATE family, multidrug efflux pump" }, { "name":"SPSPH_040890 yeeO_2; (GenBank) putative FMN\/FAD exporter YeeO\tK26939 norM; MATE family, multidrug efflux pump" }, { "name":"SPSPH_006260 yeeO_1; (GenBank) putative FMN\/FAD exporter YeeO\tK26937 dinF; MATE family, multidrug efflux pump" }, { "name":"SPSPH_008010 mepA_1; (GenBank) Multidrug export protein MepA\tK26937 dinF; MATE family, multidrug efflux pump" }, { "name":"SPSPH_008130 mepA_2; (GenBank) Multidrug export protein MepA\tK26937 dinF; MATE family, multidrug efflux pump" }, { "name":"SPSPH_025000 mepA_3; (GenBank) Multidrug export protein MepA\tK26937 dinF; MATE family, multidrug efflux pump" }, { "name":"SPSPH_037960 mepA_4; (GenBank) Multidrug export protein MepA\tK26937 dinF; MATE family, multidrug efflux pump" }, { "name":"SPSPH_042860 mepA_5; (GenBank) Multidrug export protein MepA\tK26937 dinF; MATE family, multidrug efflux pump" }, { "name":"SPSPH_045960 L-lactate transporter\tK08177 oxlT; MFS transporter, OFA family, oxalate\/formate antiporter" }, { "name":"SPSPH_032170 garP; (GenBank) putative galactarate transporter\tK03535 gudP; MFS transporter, ACS family, glucarate transporter" }, { "name":"SPSPH_033560 lgoT; (GenBank) putative L-galactonate transporter\tK03535 gudP; MFS transporter, ACS family, glucarate transporter" }, { "name":"SPSPH_000520 naiP_2; (GenBank) Putative niacin\/nicotinamide transporter NaiP\tK28762 niaP; MFS transporter, niacin uptake porter" }, { "name":"SPSPH_032190 naiP_3; (GenBank) Putative niacin\/nicotinamide transporter NaiP\tK28762 niaP; MFS transporter, niacin uptake porter" }, { "name":"SPSPH_042630 uhpC; (GenBank) Membrane sensor protein UhpC\tK07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC" }, { "name":"SPSPH_002050 sbnD_1; (GenBank) Staphyloferrin B transporter\tK08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein" }, { "name":"SPSPH_038880 sbnD_2; (GenBank) Staphyloferrin B transporter\tK08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein" }, { "name":"SPSPH_039880 entS_3; (GenBank) Enterobactin exporter EntS\tK08217 mef; MFS transporter, DHA3 family, macrolide efflux protein" }, { "name":"SPSPH_001350 fsr_1; (GenBank) Fosmidomycin resistance protein\tK08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein" }, { "name":"SPSPH_046220 fsr_2; (GenBank) Fosmidomycin resistance protein\tK08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein" }, { "name":"SPSPH_038130 yihN; (GenBank) Inner membrane protein YihN\tK26602 yihN; MFS transporter, GlpU family, inner membrane protein" }, { "name":"SPSPH_037510 ygcS; (GenBank) Inner membrane metabolite transport protein YgcS\tK08368 yaaU; MFS transporter, putative metabolite transport protein" }, { "name":"SPSPH_000460 naiP_1; (GenBank) Putative niacin\/nicotinamide transporter NaiP\tK08369 ydjE; MFS transporter, putative metabolite:H+ symporter" }, { "name":"SPSPH_035120 naiP_4; (GenBank) Putative niacin\/nicotinamide transporter NaiP\tK08369 ydjE; MFS transporter, putative metabolite:H+ symporter" }, { "name":"SPSPH_046020 ptsI; (GenBank) Phosphoenolpyruvate-protein phosphotransferase\tK08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]" }, { "name":"SPSPH_046030 ptsH; (GenBank) Phosphocarrier protein HPr\tK02784 ptsH; phosphocarrier protein HPr" }, { "name":"SPSPH_046040 dhaM; (GenBank) PEP-dependent dihydroxyacetone kinase, phosphoryl donor subunit DhaM\tK05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]" }, { "name":"SPSPH_010840 glpF_1; (GenBank) Glycerol uptake facilitator protein\tK02440 glpF; glycerol uptake facilitator" }, { "name":"SPSPH_030380 glpF_2; (GenBank) Glycerol uptake facilitator protein\tK02440 glpF; glycerol uptake facilitator" }, { "name":"SPSPH_022760 amt; (GenBank) Ammonia channel\tK03320 amt; ammonium transporter, Amt family" }, { "name":"SPSPH_042030 nrgA; (GenBank) Ammonium transporter\tK03320 amt; ammonium transporter, Amt family" }, { "name":"SPSPH_024740 mscL; (GenBank) Large-conductance mechanosensitive channel\tK03282 mscL; large conductance mechanosensitive channel" }, { "name":"SPSPH_046250 mscS; (GenBank) Small-conductance mechanosensitive channel\tK22044 ybiO; moderate conductance mechanosensitive channel" }, { "name":"SPSPH_022810 hypothetical protein\tK16052 ynaI; MscS family membrane protein" }, { "name":"SPSPH_011990 pomA; (GenBank) Chemotaxis protein PomA\tK02556 motA; chemotaxis protein MotA" }, { "name":"SPSPH_012000 motB; (GenBank) Motility protein B\tK02557 motB; chemotaxis protein MotB" }, { "name":"SPSPH_006600 tolQ_1; (GenBank) Tol-Pal system protein TolQ\tK03561 exbB; biopolymer transport protein ExbB" }, { "name":"SPSPH_006670 tolQ_2; (GenBank) Tol-Pal system protein TolQ\tK03561 exbB; biopolymer transport protein ExbB" }, { "name":"SPSPH_007060 tolQ_3; (GenBank) Tol-Pal system protein TolQ\tK03561 exbB; biopolymer transport protein ExbB" }, { "name":"SPSPH_010300 tolQ_4; (GenBank) Tol-Pal system protein TolQ\tK03561 exbB; biopolymer transport protein ExbB" }, { "name":"SPSPH_036580 tolQ_5; (GenBank) Tol-Pal system protein TolQ\tK03561 exbB; biopolymer transport protein ExbB" }, { "name":"SPSPH_006610 tolR_1; (GenBank) Tol-Pal system protein TolR\tK03559 exbD; biopolymer transport protein ExbD" }, { "name":"SPSPH_006680 tolR_2; (GenBank) Tol-Pal system protein TolR\tK03559 exbD; biopolymer transport protein ExbD" }, { "name":"SPSPH_007070 tolR_3; (GenBank) Tol-Pal system protein TolR\tK03559 exbD; biopolymer transport protein ExbD" }, { "name":"SPSPH_010310 exbD; (GenBank) Biopolymer transport protein ExbD\tK03559 exbD; biopolymer transport protein ExbD" }, { "name":"SPSPH_036570 tolR_4; (GenBank) Tol-Pal system protein TolR\tK03559 exbD; biopolymer transport protein ExbD" }, { "name":"SPSPH_000900 hypothetical protein\tK03284 corA; magnesium transporter" }, { "name":"SPSPH_001610 corA; (GenBank) Cobalt\/magnesium transport protein CorA\tK03284 corA; magnesium transporter" }, { "name":"SPSPH_025360 crcB; (GenBank) Putative fluoride ion transporter CrcB\tK06199 crcB; fluoride exporter" }, { "name":"SPSPH_015070 hypothetical protein\tK03699 tlyC; magnesium and cobalt exporter, CNNM family" }, { "name":"SPSPH_019540 hypothetical protein\tK03699 tlyC; magnesium and cobalt exporter, CNNM family" }, { "name":"SPSPH_025160 hypothetical protein\tK03699 tlyC; magnesium and cobalt exporter, CNNM family" }, { "name":"SPSPH_025630 hypothetical protein\tK03699 tlyC; magnesium and cobalt exporter, CNNM family" }, { "name":"SPSPH_006650 btuB_1; (GenBank) Vitamin B12 transporter BtuB\tK16092 btuB; vitamin B12 transporter" }, { "name":"SPSPH_006860 btuB_3; (GenBank) Vitamin B12 transporter BtuB\tK16092 btuB; vitamin B12 transporter" }, { "name":"SPSPH_007080 btuB_6; (GenBank) Vitamin B12 transporter BtuB\tK16092 btuB; vitamin B12 transporter" }, { "name":"SPSPH_007660 btuB_7; (GenBank) Vitamin B12 transporter BtuB\tK16092 btuB; vitamin B12 transporter" }, { "name":"SPSPH_007750 btuB_8; (GenBank) Vitamin B12 transporter BtuB\tK16092 btuB; vitamin B12 transporter" }, { "name":"SPSPH_007840 btuB_9; (GenBank) Vitamin B12 transporter BtuB\tK16092 btuB; vitamin B12 transporter" }, { "name":"SPSPH_008000 btuB_10; (GenBank) Vitamin B12 transporter BtuB\tK16092 btuB; vitamin B12 transporter" }, { "name":"SPSPH_008100 cirA_2; (GenBank) Colicin I receptor\tK16092 btuB; vitamin B12 transporter" }, { "name":"SPSPH_011120 btuB_11; (GenBank) Vitamin B12 transporter BtuB\tK16092 btuB; vitamin B12 transporter" }, { "name":"SPSPH_036550 btuB_14; (GenBank) Vitamin B12 transporter BtuB\tK16092 btuB; vitamin B12 transporter" }, { "name":"SPSPH_006820 cirA_1; (GenBank) Colicin I receptor\tK16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins" }, { "name":"SPSPH_006870 btuB_4; (GenBank) Vitamin B12 transporter BtuB\tK16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins" }, { "name":"SPSPH_036510 btuB_13; (GenBank) Vitamin B12 transporter BtuB\tK16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins" }, { "name":"SPSPH_037690 cirA_3; (GenBank) Colicin I receptor\tK16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins" }, { "name":"SPSPH_042380 cirA_4; (GenBank) Colicin I receptor\tK16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins" }, { "name":"SPSPH_006960 btuB_5; (GenBank) Vitamin B12 transporter BtuB\tK02014 TC.FEV.OM; iron complex outermembrane recepter protein" }, { "name":"SPSPH_010270 pfeA; (GenBank) Ferric enterobactin receptor\tK02014 TC.FEV.OM; iron complex outermembrane recepter protein" }, { "name":"SPSPH_038330 fhuA; (GenBank) Ferrichrome outer membrane transporter\/phage receptor\tK02014 TC.FEV.OM; iron complex outermembrane recepter protein" }, { "name":"SPSPH_038790 fatA; (GenBank) Ferric-anguibactin receptor FatA\tK02014 TC.FEV.OM; iron complex outermembrane recepter protein" }, { "name":"SPSPH_005270 tolC_1; (GenBank) Outer membrane protein TolC\tK07796 cusC; outer membrane protein, copper\/silver efflux system" }, { "name":"SPSPH_005700 tolC_2; (GenBank) Outer membrane protein TolC\tK12340 tolC; outer membrane protein" }, { "name":"SPSPH_033510 hypothetical protein\tK12340 tolC; outer membrane protein" }, { "name":"SPSPH_039650 oprM; (GenBank) Outer membrane protein OprM\tK12340 tolC; outer membrane protein" }, { "name":"SPSPH_033470 bamA; (GenBank) Outer membrane protein assembly factor BamA\tK07277 SAM50; outer membrane protein insertion porin family" }, { "name":"SPSPH_026960 cidA; (GenBank) Holin-like protein CidA\tK06518 cidA; holin-like protein" }, { "name":"SPSPH_010680 pduA_1; (GenBank) Propanediol utilization protein PduA\tK27260 pduA; bacterial microcompartment shell protein" }, { "name":"SPSPH_010760 pduA_2; (GenBank) Propanediol utilization protein PduA\tK27260 pduA; bacterial microcompartment shell protein" }, { "name":"SPSPH_003140 aroP_1; (GenBank) Aromatic amino acid transport protein AroP\tK11734 aroP; aromatic amino acid transport protein AroP" }, { "name":"SPSPH_003640 yndE; (GenBank) Spore germination protein YndE\tK06311 yndE; spore germination protein" }, { "name":"SPSPH_013400 zupT; (GenBank) Zinc transporter ZupT\tK07238 TC.ZIP; zinc transporter, ZIP family" }, { "name":"SPSPH_005290 cusA; (GenBank) Cation efflux system protein CusA\tK07787 cusA; copper\/silver efflux system protein" }, { "name":"SPSPH_007860 bepG; (GenBank) Efflux pump membrane transporter BepG\tK18303 mexK; multidrug efflux pump" }, { "name":"SPSPH_008120 czcA_1; (GenBank) Cobalt-zinc-cadmium resistance protein CzcA\tK18303 mexK; multidrug efflux pump" }, { "name":"SPSPH_024880 mdtB; (GenBank) Multidrug resistance protein MdtB\tK18303 mexK; multidrug efflux pump" }, { "name":"SPSPH_006720 swrC; (GenBank) Swarming motility protein SwrC\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_008170 bepE_1; (GenBank) Efflux pump membrane transporter BepE\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_013310 bepE_2; (GenBank) Efflux pump membrane transporter BepE\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_015890 mdtC_1; (GenBank) Multidrug resistance protein MdtC\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_039670 bepE_3; (GenBank) Efflux pump membrane transporter BepE\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_042790 mdtC_2; (GenBank) Multidrug resistance protein MdtC\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_025910 qacC; (GenBank) Quaternary ammonium compound-resistance protein QacC\tK03297 emrE; small multidrug resistance pump" }, { "name":"SPSPH_039910 gdnC; (GenBank) putative guanidinium efflux system subunit GdnC\tK18924 ykkC; paired small multidrug resistance pump" }, { "name":"SPSPH_039900 gdnD; (GenBank) putative guanidinium efflux system subunit GdnD\tK18925 ykkD; paired small multidrug resistance pump" }, { "name":"SPSPH_009450 hypothetical protein\tK08978 TC.BAT1; bacterial\/archaeal transporter family protein" }, { "name":"SPSPH_034450 hypothetical protein\tK08978 TC.BAT1; bacterial\/archaeal transporter family protein" }, { "name":"SPSPH_043420 eamA_6; (GenBank) putative amino-acid metabolite efflux pump\tK15268 eamA; O-acetylserine\/cysteine efflux transporter" }, { "name":"SPSPH_013280 rarD; (GenBank) Protein RarD\tK05786 rarD; chloramphenicol-sensitive protein RarD" }, { "name":"SPSPH_019800 hypothetical protein\tK09936 TC.BAT2; bacterial\/archaeal transporter family-2 protein" }, { "name":"SPSPH_043610 hypothetical protein\tK09771 TC.SMR3; small multidrug resistance family-3 protein" }, { "name":"SPSPH_035840 kdgT; (GenBank) 2-keto-3-deoxygluconate permease\tK02526 kdgT; 2-keto-3-deoxygluconate permease" }, { "name":"SPSPH_012480 lutP_1; (GenBank) L-lactate permease\tK00427 lldP; L-lactate permease" }, { "name":"SPSPH_013710 glcA_1; (GenBank) Glycolate permease GlcA\tK03303 lutP; lactate permease" }, { "name":"SPSPH_027350 lutP_2; (GenBank) L-lactate permease\tK03303 lutP; lactate permease" }, { "name":"SPSPH_028580 glcA_2; (GenBank) Glycolate permease GlcA\tK03303 lutP; lactate permease" }, { "name":"SPSPH_035570 lctP; (GenBank) L-lactate permease\tK03303 lutP; lactate permease" }, { "name":"SPSPH_036070 lutP_3; (GenBank) L-lactate permease\tK03303 lutP; lactate permease" }, { "name":"SPSPH_008850 putative glycine betaine transporter\tK05020 opuD; glycine betaine transporter" }, { "name":"SPSPH_009030 opuD_1; (GenBank) Glycine betaine transporter OpuD\tK05020 opuD; glycine betaine transporter" }, { "name":"SPSPH_009070 putative glycine betaine transporter\tK05020 opuD; glycine betaine transporter" }, { "name":"SPSPH_010420 ectT; (GenBank) Ectoine\/hydroxyectoine transporter\tK05020 opuD; glycine betaine transporter" }, { "name":"SPSPH_031220 opuD_2; (GenBank) Glycine betaine transporter OpuD\tK05020 opuD; glycine betaine transporter" }, { "name":"SPSPH_038080 putative glycine betaine transporter\tK05020 opuD; glycine betaine transporter" }, { "name":"SPSPH_031230 caiT; (GenBank) L-carnitine\/gamma-butyrobetaine antiporter\tK05245 caiT; L-carnitine\/gamma-butyrobetaine antiporter" }, { "name":"SPSPH_035060 yodF_2; (GenBank) putative symporter YodF\tK14392 panF; sodium\/pantothenate symporter" }, { "name":"SPSPH_034890 putP_2; (GenBank) High-affinity proline transporter PutP\tK11928 putP; sodium\/proline symporter" }, { "name":"SPSPH_030100 dctA2; (GenBank) C4-dicarboxylate transport protein 2\tK11103 dctA; aerobic C4-dicarboxylate transport protein" }, { "name":"SPSPH_013200 gltS_1; (GenBank) Sodium\/glutamate symporter\tK03312 gltS; glutamate:Na+ symporter, ESS family" }, { "name":"SPSPH_038990 gltS_2; (GenBank) Sodium\/glutamate symporter\tK03312 gltS; glutamate:Na+ symporter, ESS family" }, { "name":"SPSPH_030090 kefB; (GenBank) Glutathione-regulated potassium-efflux system protein KefB\tK26735 KEA4_5_6; K+:H+ antiporter" }, { "name":"SPSPH_019960 ktrB; (GenBank) Ktr system potassium uptake protein B\tK03498 trkH; trk\/ktr system potassium uptake protein" }, { "name":"SPSPH_019970 ktrA; (GenBank) Ktr system potassium uptake protein A\tK03499 trkA; trk\/ktr system potassium uptake protein" }, { "name":"SPSPH_031130 codB_1; (GenBank) Cytosine permease\tK10974 codB; cytosine permease" }, { "name":"SPSPH_034310 uraA; (GenBank) Uracil permease\tK02824 uraA; uracil permease" }, { "name":"SPSPH_034840 uacT_1; (GenBank) Uric acid transporter UacT\tK24206 uacT; uric acid transporter" }, { "name":"SPSPH_035320 uacT_2; (GenBank) Uric acid transporter UacT\tK24206 uacT; uric acid transporter" }, { "name":"SPSPH_012870 adeQ_1; (GenBank) Adenine permease AdeQ\tK06901 pbuG; adenine\/guanine\/hypoxanthine permease" }, { "name":"SPSPH_035890 adeQ_2; (GenBank) Adenine permease AdeQ\tK06901 pbuG; adenine\/guanine\/hypoxanthine permease" }, { "name":"SPSPH_025620 ydcO; (GenBank) Inner membrane protein YdcO\tK05782 benE; benzoate membrane transport protein" }, { "name":"SPSPH_012510 eriC; (GenBank) Chloride\/fluoride channel protein\tK03281 clcA; chloride channel protein, CIC family" }, { "name":"SPSPH_038760 hypothetical protein\tK03324 yjbB; phosphate:Na+ symporter" }, { "name":"SPSPH_025860 arsA; (GenBank) Arsenical pump-driving ATPase\tK01551 arsA; arsenite\/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]" }, { "name":"SPSPH_035730 dcuD_2; (GenBank) Putative cryptic C4-dicarboxylate transporter DcuD\tK03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family" }, { "name":"SPSPH_038700 dcuD_3; (GenBank) Putative cryptic C4-dicarboxylate transporter DcuD\tK03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family" }, { "name":"SPSPH_003280 spoVB_1; (GenBank) Stage V sporulation protein B\tK06409 spoVB; stage V sporulation protein B" }, { "name":"SPSPH_004320 spoVB_2; (GenBank) Stage V sporulation protein B\tK06409 spoVB; stage V sporulation protein B" }, { "name":"SPSPH_011400 hypothetical protein\tK28868 K28868; oligopeptide transporter family protein" }, { "name":"SPSPH_023370 argO; (GenBank) Arginine exporter protein ArgO\tK06895 lysE; L-lysine exporter family protein LysE\/ArgO" }, { "name":"SPSPH_034410 eamB; (GenBank) Cysteine\/O-acetylserine efflux protein\tK11249 eamB; cysteine\/O-acetylserine efflux protein" }, { "name":"SPSPH_013000 ygaZ; (GenBank) Inner membrane protein YgaZ\tK26605 azlC; branched chain amino acid efflux pump" }, { "name":"SPSPH_043630 hypothetical protein\tK26605 azlC; branched chain amino acid efflux pump" }, { "name":"SPSPH_013010 hypothetical protein\tK26606 azlD; branched chain amino acid efflux pump" }, { "name":"SPSPH_043620 hypothetical protein\tK26606 azlD; branched chain amino acid efflux pump" }, { "name":"SPSPH_031060 hypothetical protein\tK07793 tctA; putative tricarboxylic transport membrane protein" }, { "name":"SPSPH_036340 hypothetical protein\tK07793 tctA; putative tricarboxylic transport membrane protein" }, { "name":"SPSPH_040020 hypothetical protein\tK07793 tctA; putative tricarboxylic transport membrane protein" }, { "name":"SPSPH_041590 hypothetical protein\tK07793 tctA; putative tricarboxylic transport membrane protein" }, { "name":"SPSPH_031070 hypothetical protein\tK07794 tctB; putative tricarboxylic transport membrane protein" }, { "name":"SPSPH_036330 hypothetical protein\tK07794 tctB; putative tricarboxylic transport membrane protein" }, { "name":"SPSPH_040030 hypothetical protein\tK07794 tctB; putative tricarboxylic transport membrane protein" }, { "name":"SPSPH_036290 hypothetical protein\tK07795 tctC; putative tricarboxylic transport membrane protein" }, { "name":"SPSPH_040040 hypothetical protein\tK07795 tctC; putative tricarboxylic transport membrane protein" }, { "name":"SPSPH_041610 hypothetical protein\tK07795 tctC; putative tricarboxylic transport membrane protein" }, { "name":"SPSPH_041540 fmnP; (GenBank) Riboflavin transporter FmnP\tK23675 fmnP; riboflavin transporter" }, { "name":"SPSPH_020500 satP; (GenBank) Succinate-acetate\/proton symporter SatP\tK07034 GPR1; acetate uptake transporter family protein" }, { "name":"SPSPH_016420 ftsW_1; (GenBank) putative peptidoglycan glycosyltransferase FtsW\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"SPSPH_021620 rodA; (GenBank) putative FtsW-like protein\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"SPSPH_044110 ftsW_2; (GenBank) putative peptidoglycan glycosyltransferase FtsW\tK03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]" }, { "name":"SPSPH_019720 mneA; (GenBank) Putative manganese exporter\tK23541 TMEM165; Ca2+\/H+ antiporter, TMEM165\/GDT1 family" }, { "name":"SPSPH_026150 hypothetical protein\tK23541 TMEM165; Ca2+\/H+ antiporter, TMEM165\/GDT1 family" }, { "name":"SPSPH_033920 mntP; (GenBank) manganese efflux pump MntP\tK23242 mntP; manganese efflux pump family protein" }, { "name":"SPSPH_025320 hypothetical protein\tK08970 rcnA; nickel\/cobalt transporter (NicO) family protein" }, { "name":"SPSPH_026500 hypothetical protein\tK08970 rcnA; nickel\/cobalt transporter (NicO) family protein" }, { "name":"SPSPH_018930 cstA_1; (GenBank) Peptide transporter CstA\tK06200 cstA; carbon starvation protein" }, { "name":"SPSPH_039360 cstA_2; (GenBank) Peptide transporter CstA\tK06200 cstA; carbon starvation protein" }, { "name":"SPSPH_006690 hypothetical protein\tK03832 tonB; periplasmic protein TonB" }, { "name":"SPSPH_010260 hypothetical protein\tK03832 tonB; periplasmic protein TonB" }, { "name":"SPSPH_036560 hypothetical protein\tK03832 tonB; periplasmic protein TonB" }, { "name":"SPSPH_042460 hypothetical protein\tK03832 tonB; periplasmic protein TonB" }, { "name":"SPSPH_030230 hppA; (GenBank) K(+)-stimulated pyrophosphate-energized proton pump\tK15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]" }, { "name":"SPSPH_000580 gcdB_1; (GenBank) Glutaconyl-CoA decarboxylase subunit beta\tK20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]" }, { "name":"SPSPH_014570 gcdB_2; (GenBank) Glutaconyl-CoA decarboxylase subunit beta\tK20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]" }, { "name":"SPSPH_023780 oadA; (GenBank) Oxaloacetate decarboxylase alpha chain\tK01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]" }, { "name":"SPSPH_014540 pccB; (GenBank) Propionyl-CoA carboxylase beta chain\tK01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]" }, { "name":"SPSPH_014560 gcdC; (GenBank) Glutaconyl-CoA decarboxylase subunit gamma\tK23351 gcdC; glutaconyl-CoA\/methylmalonyl-CoA decarboxylase subunit gamma" }, { "name":"SPSPH_015290 dsbD; (GenBank) Thiol:disulfide interchange protein DsbD\tK06196 ccdA; cytochrome c-type biogenesis protein" }, { "name":"SPSPH_005280 cusB; (GenBank) Cation efflux system protein CusB\tK07798 cusB; membrane fusion protein, copper\/silver efflux system" }, { "name":"SPSPH_008110 ttgG; (GenBank) Toluene efflux pump periplasmic linker protein TtgG\tK18302 mexJ; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_024890 macA_3; (GenBank) Macrolide export protein MacA\tK18302 mexJ; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_006710 mdtA_1; (GenBank) Multidrug resistance protein MdtA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_008160 acrE; (GenBank) Multidrug export protein AcrE\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_013320 bepF; (GenBank) Efflux pump periplasmic linker BepF\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_015880 mdtA_3; (GenBank) Multidrug resistance protein MdtA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_027730 mdtA_5; (GenBank) Multidrug resistance protein MdtA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_039660 acrA; (GenBank) Multidrug efflux pump subunit AcrA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_042800 mdtA_6; (GenBank) Multidrug resistance protein MdtA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_013090 hypothetical protein\tK04758 feoA; ferrous iron transport protein A" }, { "name":"SPSPH_016300 hypothetical protein\tK04758 feoA; ferrous iron transport protein A" }, { "name":"SPSPH_037410 hypothetical protein\tK04758 feoA; ferrous iron transport protein A" }, { "name":"SPSPH_037420 hypothetical protein\tK04758 feoA; ferrous iron transport protein A" }, { "name":"SPSPH_013110 feoB_2; (GenBank) Fe(2+) transporter FeoB\tK04759 feoB; ferrous iron transport protein B" }, { "name":"SPSPH_016290 feoB_3; (GenBank) Fe(2+) transporter FeoB\tK04759 feoB; ferrous iron transport protein B" }, { "name":"SPSPH_037400 feoB_4; (GenBank) Fe(2+) transporter FeoB\tK04759 feoB; ferrous iron transport protein B" }, { "name":"SPSPH_042050 feoB_5; (GenBank) Fe(2+) transporter FeoB\tK04759 feoB; ferrous iron transport protein B" }, { "name":"SPSPH_034210 hypothetical protein\tK02198 ccmF; cytochrome c-type biogenesis protein CcmF" }, { "name":"SPSPH_017690 sapB; (GenBank) Protein SapB\tK07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein" } ] }, { "name":"02044 Secretion system [BR:ssph02044]", "children":[ { "name":"SPSPH_005700 tolC_2; (GenBank) Outer membrane protein TolC\tK12340 tolC; outer membrane protein" }, { "name":"SPSPH_033510 hypothetical protein\tK12340 tolC; outer membrane protein" }, { "name":"SPSPH_039650 oprM; (GenBank) Outer membrane protein OprM\tK12340 tolC; outer membrane protein" }, { "name":"SPSPH_047140 hypothetical protein\tK02456 gspG; general secretion pathway protein G" }, { "name":"SPSPH_015740 comC; (GenBank) Type 4 prepilin-like proteins leader peptide-processing enzyme\tK02654 pilD; leader peptidase (prepilin peptidase) \/ N-methyltransferase [EC:3.4.23.43 2.1.1.-]" }, { "name":"SPSPH_015730 hypothetical protein\tK02650 pilA; type IV pilus assembly protein PilA" }, { "name":"SPSPH_015700 hypothetical protein\tK02652 pilB; type IV pilus assembly protein PilB" }, { "name":"SPSPH_047160 hypothetical protein\tK02652 pilB; type IV pilus assembly protein PilB" }, { "name":"SPSPH_015720 epsF; (GenBank) Type II secretion system protein F\tK02653 pilC; type IV pilus assembly protein PilC" }, { "name":"SPSPH_047150 hypothetical protein\tK02653 pilC; type IV pilus assembly protein PilC" }, { "name":"SPSPH_015800 ftsA_2; (GenBank) Cell division protein FtsA\tK02662 pilM; type IV pilus assembly protein PilM" }, { "name":"SPSPH_015810 hypothetical protein\tK02663 pilN; type IV pilus assembly protein PilN" }, { "name":"SPSPH_015820 hypothetical protein\tK02664 pilO; type IV pilus assembly protein PilO" }, { "name":"SPSPH_015710 pilT; (GenBank) Twitching mobility protein\tK02669 pilT; twitching motility protein PilT" }, { "name":"SPSPH_019210 hypothetical protein\tK02237 comEA; competence protein ComEA" }, { "name":"SPSPH_033860 hypothetical protein\tK01493 comEB; dCMP deaminase [EC:3.5.4.12]" }, { "name":"SPSPH_019220 comEC_2; (GenBank) ComE operon protein 3\tK02238 comEC; competence protein ComEC" }, { "name":"SPSPH_015790 hypothetical protein\tK02241 comFB; competence protein ComFB" }, { "name":"SPSPH_017430 flhA; (GenBank) Flagellar biosynthesis protein FlhA\tK02400 flhA; flagellar biosynthesis protein FlhA" }, { "name":"SPSPH_017420 flhB_2; (GenBank) Flagellar biosynthetic protein FlhB\tK02401 flhB; flagellar biosynthesis protein FlhB" }, { "name":"SPSPH_017000 flhB_1; (GenBank) Flagellar biosynthetic protein FlhB\tK04061 flhB2; flagellar biosynthesis protein" }, { "name":"SPSPH_017220 hypothetical protein\tK02409 fliF; flagellar M-ring protein FliF" }, { "name":"SPSPH_017240 yscL; (GenBank) Yop proteins translocation protein L\tK02411 fliH; flagellar assembly protein FliH" }, { "name":"SPSPH_017250 yscN; (GenBank) putative ATP synthase YscN\tK02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]" }, { "name":"SPSPH_017360 hypothetical protein\tK02417 fliN; flagellar motor switch protein FliN" }, { "name":"SPSPH_017390 fliP; (GenBank) Flagellar biosynthetic protein FliP\tK02419 fliP; flagellar biosynthesis protein FliP" }, { "name":"SPSPH_017400 fliQ; (GenBank) Flagellar biosynthetic protein FliQ\tK02420 fliQ; flagellar biosynthesis protein FliQ" }, { "name":"SPSPH_017410 fliR; (GenBank) Flagellar biosynthetic protein FliR\tK02421 fliR; flagellar biosynthesis protein FliR" }, { "name":"SPSPH_047290 hypothetical protein\tK20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]" }, { "name":"SPSPH_047320 hypothetical protein\tK20528 trbC; type IV secretion system protein TrbC" }, { "name":"SPSPH_047280 hypothetical protein\tK20529 trbD; type IV secretion system protein TrbD" }, { "name":"SPSPH_047270 virB4; (GenBank) Type IV secretion system protein virB4\tK20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]" }, { "name":"SPSPH_047310 hypothetical protein\tK20531 trbF; type IV secretion system protein TrbF" }, { "name":"SPSPH_047230 hypothetical protein\tK20532 trbG; type IV secretion system protein TrbG" }, { "name":"SPSPH_047300 hypothetical protein\tK20533 trbI; type IV secretion system protein TrbI" }, { "name":"SPSPH_047260 hypothetical protein\tK20266 trbJ; type IV secretion system protein TrbJ" }, { "name":"SPSPH_047240 hypothetical protein\tK07344 trbL; type IV secretion system protein TrbL" }, { "name":"SPSPH_030810 secA; (GenBank) Protein translocase subunit SecA\tK03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]" }, { "name":"SPSPH_020340 secDF; (GenBank) Protein translocase subunit SecDF\tK03072 secD; preprotein translocase subunit SecD" }, { "name":"SPSPH_004510 secE; (GenBank) Protein translocase subunit SecE\tK03073 secE; preprotein translocase subunit SecE" }, { "name":"SPSPH_020350 secF; (GenBank) Protein translocase subunit SecF\tK03074 secF; preprotein translocase subunit SecF" }, { "name":"SPSPH_030240 secG; (GenBank) putative protein-export membrane protein SecG\tK03075 secG; preprotein translocase subunit SecG" }, { "name":"SPSPH_004850 secY; (GenBank) Protein translocase subunit SecY\tK03076 secY; preprotein translocase subunit SecY" }, { "name":"SPSPH_016880 ffh; (GenBank) Signal recognition particle protein\tK03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]" }, { "name":"SPSPH_016860 ftsY; (GenBank) Signal recognition particle receptor FtsY\tK03110 ftsY; fused signal recognition particle receptor" }, { "name":"SPSPH_020310 hypothetical protein\tK03210 yajC; preprotein translocase subunit YajC" }, { "name":"SPSPH_046640 yidC2; (GenBank) Membrane protein insertase YidC 2\tK03217 yidC; YidC\/Oxa1 family membrane protein insertase" }, { "name":"SPSPH_013780 tatA; (GenBank) Sec-independent protein translocase protein TatA\tK03116 tatA; sec-independent protein translocase protein TatA" }, { "name":"SPSPH_013790 tatC; (GenBank) Sec-independent protein translocase protein TatC\tK03118 tatC; sec-independent protein translocase protein TatC" } ] }, { "name":"02042 Bacterial toxins [BR:ssph02042]", "children":[ { "name":"SPSPH_015070 hypothetical protein\tK03699 tlyC; magnesium and cobalt exporter, CNNM family" }, { "name":"SPSPH_019540 hypothetical protein\tK03699 tlyC; magnesium and cobalt exporter, CNNM family" }, { "name":"SPSPH_025160 hypothetical protein\tK03699 tlyC; magnesium and cobalt exporter, CNNM family" }, { "name":"SPSPH_025630 hypothetical protein\tK03699 tlyC; magnesium and cobalt exporter, CNNM family" }, { "name":"SPSPH_002970 hypothetical protein\tK11068 hlyIII; hemolysin III" }, { "name":"SPSPH_003570 hypothetical protein\tK01114 plc; phospholipase C [EC:3.1.4.3]" } ] }, { "name":"02022 Two-component system [BR:ssph02022]", "children":[ { "name":"SPSPH_003500 phoR; (GenBank) Alkaline phosphatase synthesis sensor protein PhoR\tK07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]" }, { "name":"SPSPH_003310 phoP_1; (GenBank) Alkaline phosphatase synthesis transcriptional regulatory protein PhoP\tK07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP" }, { "name":"SPSPH_038740 phoP_4; (GenBank) Alkaline phosphatase synthesis transcriptional regulatory protein PhoP\tK07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP" }, { "name":"SPSPH_008300 kdpD; (GenBank) Sensor protein KdpD\tK07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]" }, { "name":"SPSPH_002180 walR; (GenBank) Transcriptional regulatory protein WalR\tK07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE" }, { "name":"SPSPH_008310 kdpE; (GenBank) KDP operon transcriptional regulatory protein KdpE\tK07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE" }, { "name":"SPSPH_006090 srrA_1; (GenBank) Transcriptional regulatory protein SrrA\tK07775 resD; two-component system, OmpR family, response regulator ResD" }, { "name":"SPSPH_001620 degS; (GenBank) Signal transduction histidine-protein kinase\/phosphatase DegS\tK07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]" }, { "name":"SPSPH_002660 cheB_1; (GenBank) Protein-glutamate methylesterase\/protein-glutamine glutaminase\tK02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F" }, { "name":"SPSPH_018230 spo0A; (GenBank) Stage 0 sporulation protein A\tK07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A" }, { "name":"SPSPH_012420 dcuR; (GenBank) Transcriptional regulatory protein DcuR\tK11692 K11692; two-component system, CitB family, response regulator DctR" }, { "name":"SPSPH_039380 ypdA_2; (GenBank) Sensor histidine kinase YpdA\tK07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]" }, { "name":"SPSPH_002310 btsS; (GenBank) Sensor histidine kinase BtsS\tK02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]" }, { "name":"SPSPH_018910 ypdA_1; (GenBank) Sensor histidine kinase YpdA\tK02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]" }, { "name":"SPSPH_045930 ypdA_3; (GenBank) Sensor histidine kinase YpdA\tK02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]" }, { "name":"SPSPH_002320 ypdB_1; (GenBank) Transcriptional regulatory protein YpdB\tK02477 K02477; two-component system, LytTR family, response regulator" }, { "name":"SPSPH_018920 ypdB_2; (GenBank) Transcriptional regulatory protein YpdB\tK02477 K02477; two-component system, LytTR family, response regulator" }, { "name":"SPSPH_039370 ypdB_3; (GenBank) Transcriptional regulatory protein YpdB\tK02477 K02477; two-component system, LytTR family, response regulator" }, { "name":"SPSPH_045940 ypdB_4; (GenBank) Transcriptional regulatory protein YpdB\tK02477 K02477; two-component system, LytTR family, response regulator" }, { "name":"SPSPH_001170 atoC_1; (GenBank) Regulatory protein AtoC\tK07714 atoC; two-component system, NtrC family, response regulator AtoC" }, { "name":"SPSPH_035500 atoC_3; (GenBank) Regulatory protein AtoC\tK07714 atoC; two-component system, NtrC family, response regulator AtoC" }, { "name":"SPSPH_041910 atoC_4; (GenBank) Regulatory protein AtoC\tK07714 atoC; two-component system, NtrC family, response regulator AtoC" }, { "name":"SPSPH_017480 cheA; (GenBank) Chemotaxis protein CheA\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SPSPH_034270 rcsC_7; (GenBank) Sensor histidine kinase RcsC\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SPSPH_034720 rcsC_8; (GenBank) Sensor histidine kinase RcsC\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SPSPH_037440 hypothetical protein\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SPSPH_017370 cheY_1; (GenBank) Chemotaxis protein CheY\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SPSPH_022280 cheY_2; (GenBank) Chemotaxis protein CheY\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SPSPH_023480 cheB_6; (GenBank) Protein-glutamate methylesterase\/protein-glutamine glutaminase\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SPSPH_027230 cheY_3; (GenBank) Chemotaxis protein CheY\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SPSPH_017470 cheB_5; (GenBank) Protein-glutamate methylesterase\/protein-glutamine glutaminase\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SPSPH_046610 cheV; (GenBank) Chemotaxis protein CheV\tK03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV" }, { "name":"SPSPH_041110 glnK; (GenBank) Sensor histidine kinase GlnK\tK07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]" }, { "name":"SPSPH_041100 cheB_12; (GenBank) Protein-glutamate methylesterase\/protein-glutamine glutaminase\tK07719 glnL; two-component system, response regulator GlnL" }, { "name":"SPSPH_029350 hypothetical protein\tK07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]" }, { "name":"SPSPH_010650 cheB_4; (GenBank) Protein-glutamate methylesterase\/protein-glutamine glutaminase\tK07720 yesN; two-component system, response regulator YesN" }, { "name":"SPSPH_029340 putative response regulatory protein\tK07720 yesN; two-component system, response regulator YesN" }, { "name":"SPSPH_012140 pdtaS; (GenBank) putative sensor histidine kinase pdtaS\tK00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]" }, { "name":"SPSPH_012150 pdtaR; (GenBank) putative transcriptional regulatory protein pdtaR\tK22010 pdtaR; two-component system, response regulator PdtaR" } ] }, { "name":"02035 Bacterial motility proteins [BR:ssph02035]", "children":[ { "name":"SPSPH_017480 cheA; (GenBank) Chemotaxis protein CheA\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SPSPH_034270 rcsC_7; (GenBank) Sensor histidine kinase RcsC\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SPSPH_034720 rcsC_8; (GenBank) Sensor histidine kinase RcsC\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SPSPH_037440 hypothetical protein\tK03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]" }, { "name":"SPSPH_001920 cheW_1; (GenBank) Chemotaxis protein CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SPSPH_017490 cheW_2; (GenBank) Chemotaxis protein CheW\tK03408 cheW; purine-binding chemotaxis protein CheW" }, { "name":"SPSPH_009890 hypothetical protein\tK03409 cheX; chemotaxis protein CheX" }, { "name":"SPSPH_017500 cheC; (GenBank) CheY-P phosphatase CheC\tK03410 cheC; chemotaxis protein CheC" }, { "name":"SPSPH_017510 cheD; (GenBank) Chemoreceptor glutamine deamidase CheD\tK03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]" }, { "name":"SPSPH_001050 cheR; (GenBank) Chemotaxis protein methyltransferase\tK00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]" }, { "name":"SPSPH_017470 cheB_5; (GenBank) Protein-glutamate methylesterase\/protein-glutamine glutaminase\tK03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase\/glutaminase [EC:3.1.1.61 3.5.1.44]" }, { "name":"SPSPH_017370 cheY_1; (GenBank) Chemotaxis protein CheY\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SPSPH_022280 cheY_2; (GenBank) Chemotaxis protein CheY\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SPSPH_023480 cheB_6; (GenBank) Protein-glutamate methylesterase\/protein-glutamine glutaminase\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SPSPH_027230 cheY_3; (GenBank) Chemotaxis protein CheY\tK03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY" }, { "name":"SPSPH_046610 cheV; (GenBank) Chemotaxis protein CheV\tK03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV" }, { "name":"SPSPH_000130 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_001180 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_004190 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_005490 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_006110 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_007180 yoaH; (GenBank) Putative methyl-accepting chemotaxis protein YoaH\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_007240 mcpA_1; (GenBank) Methyl-accepting chemotaxis protein McpA\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_007570 mcpB_1; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_009230 mcpB_2; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_009360 mcpB_3; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_009630 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_011020 mcpB_4; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_011340 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_022770 mcpA_2; (GenBank) Methyl-accepting chemotaxis protein McpA\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_025200 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_026640 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_026890 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_027600 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_031690 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_034730 pctB; (GenBank) Methyl-accepting chemotaxis protein PctB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_035030 mcpB_5; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_035550 mcpB_6; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_036360 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_037490 mcpB_7; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_037820 mcpB_8; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_037880 mcpB_9; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_038060 mcpB_10; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_039280 mcpB_11; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_039300 mcp4; (GenBank) Methyl-accepting chemotaxis protein 4\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_039940 mcpA_4; (GenBank) Methyl-accepting chemotaxis protein McpA\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_041880 mcpB_12; (GenBank) Methyl-accepting chemotaxis protein McpB\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_042110 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_042280 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_042900 hypothetical protein\tK03406 mcp; methyl-accepting chemotaxis protein" }, { "name":"SPSPH_017240 yscL; (GenBank) Yop proteins translocation protein L\tK02411 fliH; flagellar assembly protein FliH" }, { "name":"SPSPH_017250 yscN; (GenBank) putative ATP synthase YscN\tK02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]" }, { "name":"SPSPH_017260 hypothetical protein\tK02413 fliJ; flagellar protein FliJ" }, { "name":"SPSPH_017390 fliP; (GenBank) Flagellar biosynthetic protein FliP\tK02419 fliP; flagellar biosynthesis protein FliP" }, { "name":"SPSPH_017400 fliQ; (GenBank) Flagellar biosynthetic protein FliQ\tK02420 fliQ; flagellar biosynthesis protein FliQ" }, { "name":"SPSPH_017410 fliR; (GenBank) Flagellar biosynthetic protein FliR\tK02421 fliR; flagellar biosynthesis protein FliR" }, { "name":"SPSPH_017430 flhA; (GenBank) Flagellar biosynthesis protein FlhA\tK02400 flhA; flagellar biosynthesis protein FlhA" }, { "name":"SPSPH_017420 flhB_2; (GenBank) Flagellar biosynthetic protein FlhB\tK02401 flhB; flagellar biosynthesis protein FlhB" }, { "name":"SPSPH_017230 fliG; (GenBank) Flagellar motor switch protein FliG\tK02410 fliG; flagellar motor switch protein FliG" }, { "name":"SPSPH_017350 fliM; (GenBank) Flagellar motor switch protein FliM\tK02416 fliM; flagellar motor switch protein FliM" }, { "name":"SPSPH_017360 hypothetical protein\tK02417 fliN; flagellar motor switch protein FliN" }, { "name":"SPSPH_017220 hypothetical protein\tK02409 fliF; flagellar M-ring protein FliF" }, { "name":"SPSPH_033610 flgI; (GenBank) Flagellar P-ring protein\tK02394 flgI; flagellar P-ring protein FlgI" }, { "name":"SPSPH_033630 hypothetical protein\tK02386 flgA; flagellar basal body P-ring formation protein FlgA" }, { "name":"SPSPH_033620 flgH; (GenBank) Flagellar L-ring protein\tK02393 flgH; flagellar L-ring protein FlgH" }, { "name":"SPSPH_017340 hypothetical protein\tK02415 fliL; flagellar protein FliL" }, { "name":"SPSPH_017210 fliE; (GenBank) Flagellar hook-basal body complex protein FliE\tK02408 fliE; flagellar hook-basal body complex protein FliE" }, { "name":"SPSPH_017290 hypothetical protein\tK02414 fliK; flagellar hook-length control protein FliK" }, { "name":"SPSPH_017190 flgB; (GenBank) Flagellar basal body rod protein FlgB\tK02387 flgB; flagellar basal-body rod protein FlgB" }, { "name":"SPSPH_017200 flgC; (GenBank) Flagellar basal-body rod protein FlgC\tK02388 flgC; flagellar basal-body rod protein FlgC" }, { "name":"SPSPH_005810 hypothetical protein\tK02389 flgD; flagellar basal-body rod modification protein FlgD" }, { "name":"SPSPH_017300 hypothetical protein\tK02389 flgD; flagellar basal-body rod modification protein FlgD" }, { "name":"SPSPH_033650 flgG_2; (GenBank) Flagellar basal-body rod protein FlgG\tK02391 flgF; flagellar basal-body rod protein FlgF" }, { "name":"SPSPH_033640 flgG_1; (GenBank) Flagellar basal-body rod protein FlgG\tK02392 flgG; flagellar basal-body rod protein FlgG" }, { "name":"SPSPH_033600 hypothetical protein\tK02395 flgJ; peptidoglycan hydrolase FlgJ" }, { "name":"SPSPH_005820 hypothetical protein\tK02390 flgE; flagellar hook protein FlgE" }, { "name":"SPSPH_017320 hypothetical protein\tK02390 flgE; flagellar hook protein FlgE" }, { "name":"SPSPH_005830 hypothetical protein\tK02396 flgK; flagellar hook-associated protein 1" }, { "name":"SPSPH_005840 flgK_1; (GenBank) Flagellar hook-associated protein 1\tK02396 flgK; flagellar hook-associated protein 1" }, { "name":"SPSPH_032630 flgK_2; (GenBank) Flagellar hook-associated protein 1\tK02396 flgK; flagellar hook-associated protein 1" }, { "name":"SPSPH_005850 hypothetical protein\tK02397 flgL; flagellar hook-associated protein 3 FlgL" }, { "name":"SPSPH_032620 hypothetical protein\tK02397 flgL; flagellar hook-associated protein 3 FlgL" }, { "name":"SPSPH_028880 hypothetical protein\tK18475 fliB; lysine-N-methylase [EC:2.1.1.-]" }, { "name":"SPSPH_029450 hypothetical protein\tK18475 fliB; lysine-N-methylase [EC:2.1.1.-]" }, { "name":"SPSPH_035390 hypothetical protein\tK18475 fliB; lysine-N-methylase [EC:2.1.1.-]" }, { "name":"SPSPH_005880 fliC; (GenBank) A-type flagellin\tK02406 fliC; flagellin" }, { "name":"SPSPH_032360 hypothetical protein\tK02406 fliC; flagellin" }, { "name":"SPSPH_032550 hypothetical protein\tK02406 fliC; flagellin" }, { "name":"SPSPH_005860 hypothetical protein\tK02407 fliD; flagellar hook-associated protein 2" }, { "name":"SPSPH_031320 hypothetical protein\tK02407 fliD; flagellar hook-associated protein 2" }, { "name":"SPSPH_032350 fliD; (GenBank) Flagellar hook-associated protein 2\tK02407 fliD; flagellar hook-associated protein 2" }, { "name":"SPSPH_032570 fliS; (GenBank) Flagellar secretion chaperone FliS\tK02422 fliS; flagellar secretion chaperone FliS" }, { "name":"SPSPH_017530 sigD_1; (GenBank) RNA polymerase sigma-D factor\tK02405 fliA; RNA polymerase sigma factor FliA" }, { "name":"SPSPH_011990 pomA; (GenBank) Chemotaxis protein PomA\tK02556 motA; chemotaxis protein MotA" }, { "name":"SPSPH_012000 motB; (GenBank) Motility protein B\tK02557 motB; chemotaxis protein MotB" }, { "name":"SPSPH_032600 fliW; (GenBank) Flagellar assembly factor FliW\tK13626 fliW; flagellar assembly factor FliW" }, { "name":"SPSPH_032650 hypothetical protein\tK02398 flgM; negative regulator of flagellin synthesis FlgM" }, { "name":"SPSPH_032580 hypothetical protein\tK06603 flaG; flagellar protein FlaG" }, { "name":"SPSPH_017330 swrD; (GenBank) Swarming motility protein SwrD\tK02385 flbD; flagellar protein FlbD" }, { "name":"SPSPH_017440 flhF; (GenBank) Flagellar biosynthesis protein FlhF\tK02404 flhF; flagellar biosynthesis protein FlhF" }, { "name":"SPSPH_017450 ylxH; (GenBank) Flagellum site-determining protein YlxH\tK04562 flhG; flagellar biosynthesis protein FlhG" }, { "name":"SPSPH_015710 pilT; (GenBank) Twitching mobility protein\tK02669 pilT; twitching motility protein PilT" }, { "name":"SPSPH_015730 hypothetical protein\tK02650 pilA; type IV pilus assembly protein PilA" }, { "name":"SPSPH_015700 hypothetical protein\tK02652 pilB; type IV pilus assembly protein PilB" }, { "name":"SPSPH_047160 hypothetical protein\tK02652 pilB; type IV pilus assembly protein PilB" }, { "name":"SPSPH_015720 epsF; (GenBank) Type II secretion system protein F\tK02653 pilC; type IV pilus assembly protein PilC" }, { "name":"SPSPH_047150 hypothetical protein\tK02653 pilC; type IV pilus assembly protein PilC" }, { "name":"SPSPH_015740 comC; (GenBank) Type 4 prepilin-like proteins leader peptide-processing enzyme\tK02654 pilD; leader peptidase (prepilin peptidase) \/ N-methyltransferase [EC:3.4.23.43 2.1.1.-]" }, { "name":"SPSPH_015820 hypothetical protein\tK02664 pilO; type IV pilus assembly protein PilO" }, { "name":"SPSPH_015810 hypothetical protein\tK02663 pilN; type IV pilus assembly protein PilN" }, { "name":"SPSPH_015800 ftsA_2; (GenBank) Cell division protein FtsA\tK02662 pilM; type IV pilus assembly protein PilM" } ] }, { "name":"03037 Cilium and associated proteins" }, { "name":"04812 Cytoskeleton proteins [BR:ssph04812]", "children":[ { "name":"SPSPH_014740 mreB; (GenBank) Cell shape-determining protein MreB\tK03569 mreB; rod shape-determining protein MreB and related proteins" }, { "name":"SPSPH_033660 mbl; (GenBank) Cell shape-determining protein Mbl\tK03569 mreB; rod shape-determining protein MreB and related proteins" }, { "name":"SPSPH_016510 ftsZ; (GenBank) Cell division protein FtsZ\tK03531 ftsZ; cell division protein FtsZ" }, { "name":"SPSPH_016500 ftsA_3; (GenBank) Cell division protein FtsA\tK03590 ftsA; cell division protein FtsA" }, { "name":"SPSPH_014790 minC; (GenBank) Septum site-determining protein MinC\tK03610 minC; septum site-determining protein MinC" }, { "name":"SPSPH_014800 minD; (GenBank) Septum site-determining protein MinD\tK03609 minD; septum site-determining protein MinD" }, { "name":"SPSPH_014810 minE; (GenBank) Cell division topological specificity factor\tK03608 minE; cell division topological specificity factor" }, { "name":"SPSPH_040740 hypothetical protein\tK03496 parA; chromosome partitioning protein" }, { "name":"SPSPH_046500 soj_1; (GenBank) Sporulation initiation inhibitor protein Soj\tK03496 parA; chromosome partitioning protein" }, { "name":"SPSPH_046670 soj_2; (GenBank) Sporulation initiation inhibitor protein Soj\tK03496 parA; chromosome partitioning protein" }, { "name":"SPSPH_046490 spo0J; (GenBank) Stage 0 sporulation protein J\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" }, { "name":"SPSPH_046570 noc; (GenBank) Nucleoid occlusion protein\tK03497 parB; ParB family transcriptional regulator, chromosome partitioning protein" } ] }, { "name":"04147 Exosome [BR:ssph04147]", "children":[ { "name":"SPSPH_022220 htpG; (GenBank) Chaperone protein HtpG\tK04079 HSP90A; molecular chaperone HtpG" }, { "name":"SPSPH_030260 eno; (GenBank) Enolase\tK01689 ENO1_2_3; enolase 1\/2\/3 [EC:4.2.1.11]" }, { "name":"SPSPH_030300 gap; (GenBank) Glyceraldehyde-3-phosphate dehydrogenase\tK00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]" }, { "name":"SPSPH_030290 pgk; (GenBank) Phosphoglycerate kinase\tK00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]" }, { "name":"SPSPH_022700 pyk_1; (GenBank) Pyruvate kinase\tK00873 PK; pyruvate kinase [EC:2.7.1.40]" }, { "name":"SPSPH_030320 pyk_2; (GenBank) Pyruvate kinase\tK00873 PK; pyruvate kinase [EC:2.7.1.40]" }, { "name":"SPSPH_000960 hypothetical protein\tK01273 DPEP; membrane dipeptidase [EC:3.4.13.19]" }, { "name":"SPSPH_012580 yqiK; (GenBank) Inner membrane protein YqiK\tK07192 FLOT; flotillin" }, { "name":"SPSPH_012170 groL_1; (GenBank) 60 kDa chaperonin\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SPSPH_042250 groL_3; (GenBank) 60 kDa chaperonin\tK04077 groEL; chaperonin GroEL [EC:5.6.1.7]" }, { "name":"SPSPH_011000 dnaK2; (GenBank) Chaperone protein dnaK2\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SPSPH_019330 dnaK; (GenBank) Chaperone protein DnaK\tK04043 dnaK; molecular chaperone DnaK" }, { "name":"SPSPH_032780 pgi; (GenBank) Glucose-6-phosphate isomerase\tK01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]" }, { "name":"SPSPH_021410 guaB; (GenBank) Inosine-5'-monophosphate dehydrogenase\tK00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]" }, { "name":"SPSPH_004480 tuf_1; (GenBank) Elongation factor Tu\tK02358 tuf; elongation factor Tu" }, { "name":"SPSPH_004630 tuf_2; (GenBank) Elongation factor Tu\tK02358 tuf; elongation factor Tu" }, { "name":"SPSPH_012430 ftsH_4; (GenBank) ATP-dependent zinc metalloprotease FtsH\tK13525 VCP; transitional endoplasmic reticulum ATPase" }, { "name":"SPSPH_019380 Purine nucleoside phosphoramidase\tK02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]" }, { "name":"SPSPH_011130 ldh; (GenBank) L-lactate dehydrogenase\tK00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]" }, { "name":"SPSPH_012840 lcfB; (GenBank) Long-chain-fatty-acid--CoA ligase\tK01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]" }, { "name":"SPSPH_001550 thlA_1; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_007500 thlA_2; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_041940 thlA_3; (GenBank) Acetyl-CoA acetyltransferase\tK00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]" }, { "name":"SPSPH_021270 ahcY; (GenBank) Adenosylhomocysteinase\tK01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]" }, { "name":"SPSPH_004860 adk; (GenBank) Adenylate kinase\tK00939 adk; adenylate kinase [EC:2.7.4.3]" }, { "name":"SPSPH_020400 apt_1; (GenBank) Adenine phosphoribosyltransferase\tK00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]" }, { "name":"SPSPH_043850 apt_2; (GenBank) Adenine phosphoribosyltransferase\tK00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]" }, { "name":"SPSPH_005170 argH; (GenBank) Argininosuccinate lyase\tK01755 argH; argininosuccinate lyase [EC:4.3.2.1]" }, { "name":"SPSPH_005160 argG; (GenBank) Argininosuccinate synthase\tK01940 argG; argininosuccinate synthase [EC:6.3.4.5]" }, { "name":"SPSPH_035310 D-hydantoinase\tK01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]" }, { "name":"SPSPH_001100 glgB; (GenBank) 1,4-alpha-glucan branching enzyme GlgB\tK00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]" }, { "name":"SPSPH_030370 glpK; (GenBank) Glycerol kinase\tK00864 glpK; glycerol kinase [EC:2.7.1.30]" }, { "name":"SPSPH_019730 hypothetical protein\tK01915 glnA; glutamine synthetase [EC:6.3.1.2]" }, { "name":"SPSPH_041010 hemB; (GenBank) Delta-aminolevulinic acid dehydratase\tK01698 hemB; porphobilinogen synthase [EC:4.2.1.24]" }, { "name":"SPSPH_026510 phoA_1; (GenBank) Alkaline phosphatase 4\tK01077 ALP; alkaline phosphatase [EC:3.1.3.1]" }, { "name":"SPSPH_046100 phoA_2; (GenBank) Alkaline phosphatase 4\tK01077 ALP; alkaline phosphatase [EC:3.1.3.1]" }, { "name":"SPSPH_002230 serA; (GenBank) D-3-phosphoglycerate dehydrogenase\tK00058 serA; D-3-phosphoglycerate dehydrogenase \/ 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]" }, { "name":"SPSPH_012930 purH; (GenBank) Bifunctional purine biosynthesis protein PurH\tK00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase \/ IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]" }, { "name":"SPSPH_023930 pdhD; (GenBank) Dihydrolipoyl dehydrogenase\tK00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]" }, { "name":"SPSPH_030280 tpiA; (GenBank) Triosephosphate isomerase\tK01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]" } ] }, { "name":"02048 Prokaryotic defense system [BR:ssph02048]", "children":[ { "name":"SPSPH_037210 cas1; (GenBank) CRISPR-associated endonuclease Cas1\tK15342 cas1; CRISP-associated protein Cas1" }, { "name":"SPSPH_037200 cas2; (GenBank) CRISPR-associated endoribonuclease Cas2\tK09951 cas2; CRISPR-associated protein Cas2" }, { "name":"SPSPH_037230 hypothetical protein\tK07012 cas3; CRISPR-associated endonuclease\/helicase Cas3 [EC:3.1.-.- 5.6.2.4]" }, { "name":"SPSPH_037220 hypothetical protein\tK07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]" }, { "name":"SPSPH_037270 hypothetical protein\tK19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]" }, { "name":"SPSPH_039770 hypothetical protein\tK01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]" }, { "name":"SPSPH_039750 hypothetical protein\tK01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]" }, { "name":"SPSPH_039760 hsdM; (GenBank) Type I restriction enzyme EcoKI M protein\tK03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]" }, { "name":"SPSPH_045610 hypothetical protein\tK00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]" }, { "name":"SPSPH_028040 hypothetical protein\tK01156 res; type III restriction enzyme [EC:3.1.21.5]" }, { "name":"SPSPH_028050 hypothetical protein\tK07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]" }, { "name":"SPSPH_039570 hypothetical protein\tK07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]" }, { "name":"SPSPH_039780 mrr_2; (GenBank) Mrr restriction system protein\tK07448 mrr; restriction system protein" }, { "name":"SPSPH_024300 hypothetical protein\tK19048 symE; toxic protein SymE" }, { "name":"SPSPH_027950 hypothetical protein\tK19048 symE; toxic protein SymE" }, { "name":"SPSPH_027990 hypothetical protein\tK19048 symE; toxic protein SymE" }, { "name":"SPSPH_045530 hypothetical protein\tK19779 ralR; endodeoxyribonuclease RalR [EC:3.1.-.-]" }, { "name":"SPSPH_012040 ndoA; (GenBank) Endoribonuclease EndoA\tK07171 mazF; mRNA interferase MazF [EC:3.1.-.-]" }, { "name":"SPSPH_032430 hypothetical protein\tK07172 mazE; antitoxin MazE" }, { "name":"SPSPH_012030 hypothetical protein\tK07723 ndoAI; CopG family transcriptional regulator \/ antitoxin EndoAI" }, { "name":"SPSPH_043040 hypothetical protein\tK07341 doc; death on curing protein" }, { "name":"SPSPH_016510 ftsZ; (GenBank) Cell division protein FtsZ\tK03531 ftsZ; cell division protein FtsZ" }, { "name":"SPSPH_014740 mreB; (GenBank) Cell shape-determining protein MreB\tK03569 mreB; rod shape-determining protein MreB and related proteins" }, { "name":"SPSPH_033660 mbl; (GenBank) Cell shape-determining protein Mbl\tK03569 mreB; rod shape-determining protein MreB and related proteins" }, { "name":"SPSPH_034290 gltX1; (GenBank) Glutamate--tRNA ligase 1\tK01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]" }, { "name":"SPSPH_020520 iscS; (GenBank) Cysteine desulfurase IscS\tK04487 iscS; cysteine desulfurase [EC:2.8.1.7]" } ] }, { "name":"04030 G protein-coupled receptors" }, { "name":"04050 Cytokine receptors" }, { "name":"04054 Pattern recognition receptors" }, { "name":"03310 Nuclear receptors" }, { "name":"04040 Ion channels" }, { "name":"04031 GTP-binding proteins" }, { "name":"04052 Cytokines and neuropeptides" }, { "name":"04515 Cell adhesion molecules" }, { "name":"04090 CD molecules" }, { "name":"01504 Antimicrobial resistance genes [BR:ssph01504]", "children":[ { "name":"SPSPH_039850 expZ; (GenBank) Nucleotide-binding protein ExpZ\tK19350 lsa; lincosamide and streptogramin A transport system ATP-binding\/permease protein" }, { "name":"SPSPH_039880 entS_3; (GenBank) Enterobactin exporter EntS\tK08217 mef; MFS transporter, DHA3 family, macrolide efflux protein" }, { "name":"SPSPH_025960 vat; (GenBank) Virginiamycin A acetyltransferase\tK18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]" }, { "name":"SPSPH_026400 hypothetical protein\tK06979 mph; macrolide phosphotransferase" }, { "name":"SPSPH_026580 blaR1; (GenBank) Regulatory protein BlaR1\tK02172 blaR1; bla regulator protein blaR1" }, { "name":"SPSPH_006710 mdtA_1; (GenBank) Multidrug resistance protein MdtA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_008160 acrE; (GenBank) Multidrug export protein AcrE\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_013320 bepF; (GenBank) Efflux pump periplasmic linker BepF\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_015880 mdtA_3; (GenBank) Multidrug resistance protein MdtA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_027730 mdtA_5; (GenBank) Multidrug resistance protein MdtA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_039660 acrA; (GenBank) Multidrug efflux pump subunit AcrA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_042800 mdtA_6; (GenBank) Multidrug resistance protein MdtA\tK03585 acrA; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_006720 swrC; (GenBank) Swarming motility protein SwrC\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_008170 bepE_1; (GenBank) Efflux pump membrane transporter BepE\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_013310 bepE_2; (GenBank) Efflux pump membrane transporter BepE\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_015890 mdtC_1; (GenBank) Multidrug resistance protein MdtC\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_039670 bepE_3; (GenBank) Efflux pump membrane transporter BepE\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_042790 mdtC_2; (GenBank) Multidrug resistance protein MdtC\tK18138 acrB; multidrug efflux pump" }, { "name":"SPSPH_008110 ttgG; (GenBank) Toluene efflux pump periplasmic linker protein TtgG\tK18302 mexJ; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_024890 macA_3; (GenBank) Macrolide export protein MacA\tK18302 mexJ; membrane fusion protein, multidrug efflux system" }, { "name":"SPSPH_007860 bepG; (GenBank) Efflux pump membrane transporter BepG\tK18303 mexK; multidrug efflux pump" }, { "name":"SPSPH_008120 czcA_1; (GenBank) Cobalt-zinc-cadmium resistance protein CzcA\tK18303 mexK; multidrug efflux pump" }, { "name":"SPSPH_024880 mdtB; (GenBank) Multidrug resistance protein MdtB\tK18303 mexK; multidrug efflux pump" }, { "name":"SPSPH_005700 tolC_2; (GenBank) Outer membrane protein TolC\tK12340 tolC; outer membrane protein" }, { "name":"SPSPH_033510 hypothetical protein\tK12340 tolC; outer membrane protein" }, { "name":"SPSPH_039650 oprM; (GenBank) Outer membrane protein OprM\tK12340 tolC; outer membrane protein" }, { "name":"SPSPH_012990 hisC_1; (GenBank) Histidinol-phosphate aminotransferase\tK18907 norG; GntR family transcriptional regulator, regulator for abcA and norABC" } ] }, { "name":"00535 Proteoglycans" }, { "name":"00536 Glycosaminoglycan binding proteins [BR:ssph00536]", "children":[ { "name":"SPSPH_027400 hypothetical protein\tK15125 fhaB; filamentous hemagglutinin" } ] }, { "name":"00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ssph00537]", "children":[ { "name":"SPSPH_026510 phoA_1; (GenBank) Alkaline phosphatase 4\tK01077 ALP; alkaline phosphatase [EC:3.1.3.1]" }, { "name":"SPSPH_046100 phoA_2; (GenBank) Alkaline phosphatase 4\tK01077 ALP; alkaline phosphatase [EC:3.1.3.1]" }, { "name":"SPSPH_000960 hypothetical protein\tK01273 DPEP; membrane dipeptidase [EC:3.4.13.19]" } ] }, { "name":"04091 Lectins" }, { "name":"04990 Domain-containing proteins not elsewhere classified" } ] }, { "name":"09185 Viral protein families", "children":[ { "name":"03200 Viral proteins" }, { "name":"03210 Viral fusion proteins" } ] }, { "name":"09184 RNA family", "children":[ { "name":"03100 Non-coding RNAs [BR:ssph03100]", "children":[ { "name":"SPSPH_003970 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"SPSPH_007200 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"SPSPH_015090 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"SPSPH_020160 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"SPSPH_024470 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"SPSPH_024520 tRNA-Ala\tK14218 tRNA-Ala; tRNA Ala" }, { "name":"SPSPH_024260 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SPSPH_028270 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SPSPH_028490 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SPSPH_031500 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SPSPH_032070 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SPSPH_043580 tRNA-Arg\tK14219 tRNA-Arg; tRNA Arg" }, { "name":"SPSPH_007230 tRNA-Asn\tK14220 tRNA-Asn; tRNA Asn" }, { "name":"SPSPH_019650 tRNA-Asn\tK14220 tRNA-Asn; tRNA Asn" }, { "name":"SPSPH_028400 tRNA-Asn\tK14220 tRNA-Asn; tRNA Asn" }, { "name":"SPSPH_028530 tRNA-Asn\tK14220 tRNA-Asn; tRNA Asn" }, { "name":"SPSPH_032240 tRNA-Asn\tK14220 tRNA-Asn; tRNA Asn" }, { "name":"SPSPH_012320 tRNA-Asp\tK14221 tRNA-Asp; tRNA Asp" }, { "name":"SPSPH_022270 tRNA-Asp\tK14221 tRNA-Asp; tRNA Asp" }, { "name":"SPSPH_022350 tRNA-Asp\tK14221 tRNA-Asp; tRNA Asp" }, { "name":"SPSPH_024270 tRNA-Asp\tK14221 tRNA-Asp; tRNA Asp" }, { "name":"SPSPH_028500 tRNA-Asp\tK14221 tRNA-Asp; tRNA Asp" }, { "name":"SPSPH_045920 tRNA-Asp\tK14221 tRNA-Asp; tRNA Asp" }, { "name":"SPSPH_012350 tRNA-Cys\tK14222 tRNA-Cys; tRNA Cys" }, { "name":"SPSPH_022240 tRNA-Cys\tK14222 tRNA-Cys; tRNA Cys" }, { "name":"SPSPH_008260 tRNA-Gln\tK14223 tRNA-Gln; tRNA Gln" }, { "name":"SPSPH_012280 tRNA-Gln\tK14223 tRNA-Gln; tRNA Gln" }, { "name":"SPSPH_013550 tRNA-Gln\tK14223 tRNA-Gln; tRNA Gln" }, { "name":"SPSPH_012300 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"SPSPH_019670 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"SPSPH_024290 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"SPSPH_028510 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"SPSPH_032230 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"SPSPH_045980 tRNA-Glu\tK14224 tRNA-Glu; tRNA Glu" }, { "name":"SPSPH_012340 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SPSPH_013610 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SPSPH_022250 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SPSPH_022340 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SPSPH_024190 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SPSPH_031510 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SPSPH_037640 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SPSPH_045880 tRNA-Gly\tK14225 tRNA-Gly; tRNA Gly" }, { "name":"SPSPH_013540 tRNA-His\tK14226 tRNA-His; tRNA His" }, { "name":"SPSPH_028380 tRNA-His\tK14226 tRNA-His; tRNA His" }, { "name":"SPSPH_003960 tRNA-Ile\tK14227 tRNA-Ile; tRNA Ile" }, { "name":"SPSPH_024480 tRNA-Ile\tK14227 tRNA-Ile; tRNA Ile" }, { "name":"SPSPH_024530 tRNA-Ile\tK14227 tRNA-Ile; tRNA Ile" }, { "name":"SPSPH_012360 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SPSPH_013570 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SPSPH_022230 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SPSPH_022440 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SPSPH_022450 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SPSPH_022460 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SPSPH_022570 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SPSPH_028440 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SPSPH_028450 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SPSPH_037670 tRNA-Leu\tK14228 tRNA-Leu; tRNA Leu" }, { "name":"SPSPH_008270 tRNA-Lys\tK14229 tRNA-Lys; tRNA Lys" }, { "name":"SPSPH_012290 tRNA-Lys\tK14229 tRNA-Lys; tRNA Lys" }, { "name":"SPSPH_013560 tRNA-Lys\tK14229 tRNA-Lys; tRNA Lys" }, { "name":"SPSPH_024440 tRNA-Lys\tK14229 tRNA-Lys; tRNA Lys" }, { "name":"SPSPH_045990 tRNA-Lys\tK14229 tRNA-Lys; tRNA Lys" }, { "name":"SPSPH_004450 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_004470 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_019110 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_019660 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_019850 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_019870 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_024200 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_024220 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_028390 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_028460 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_044300 tRNA-Met\tK14230 tRNA-Met; tRNA Met" }, { "name":"SPSPH_012330 tRNA-Phe\tK14231 tRNA-Phe; tRNA Phe" }, { "name":"SPSPH_022260 tRNA-Phe\tK14231 tRNA-Phe; tRNA Phe" }, { "name":"SPSPH_024250 tRNA-Phe\tK14231 tRNA-Phe; tRNA Phe" }, { "name":"SPSPH_045910 tRNA-Phe\tK14231 tRNA-Phe; tRNA Phe" }, { "name":"SPSPH_016620 tRNA-Pro\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"SPSPH_019080 tRNA-Pro\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"SPSPH_024180 tRNA-Pro\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"SPSPH_031520 tRNA-Pro\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"SPSPH_037660 tRNA-Pro\tK14232 tRNA-Pro; tRNA Pro" }, { "name":"SPSPH_000910 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"SPSPH_000920 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"SPSPH_028520 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"SPSPH_042770 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"SPSPH_043350 tRNA-Ser\tK14233 tRNA-Ser; tRNA Ser" }, { "name":"SPSPH_004430 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"SPSPH_004460 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"SPSPH_019860 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"SPSPH_024210 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"SPSPH_024240 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"SPSPH_028480 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"SPSPH_044510 tRNA-Thr\tK14234 tRNA-Thr; tRNA Thr" }, { "name":"SPSPH_004500 tRNA-Trp\tK14235 tRNA-Trp; tRNA Trp" }, { "name":"SPSPH_022330 tRNA-Trp\tK14235 tRNA-Trp; tRNA Trp" }, { "name":"SPSPH_004440 tRNA-Tyr\tK14236 tRNA-Tyr; tRNA Tyr" }, { "name":"SPSPH_024230 tRNA-Tyr\tK14236 tRNA-Tyr; tRNA Tyr" }, { "name":"SPSPH_028470 tRNA-Tyr\tK14236 tRNA-Tyr; tRNA Tyr" }, { "name":"SPSPH_012310 tRNA-Val\tK14237 tRNA-Val; tRNA Val" }, { "name":"SPSPH_019680 tRNA-Val\tK14237 tRNA-Val; tRNA Val" }, { "name":"SPSPH_019820 tRNA-Val\tK14237 tRNA-Val; tRNA Val" }, { "name":"SPSPH_024280 tRNA-Val\tK14237 tRNA-Val; tRNA Val" }, { "name":"SPSPH_032220 tRNA-Val\tK14237 tRNA-Val; tRNA Val" }, { "name":"SPSPH_037650 tRNA-Val\tK14237 tRNA-Val; tRNA Val" }, { "name":"SPSPH_045970 tRNA-Val\tK14237 tRNA-Val; tRNA Val" }, { "name":"SPSPH_009040 tRNA-Sec\tK14238 tRNA-Sec; tRNA Sec" }, { "name":"SPSPH_042020 tRNA-Sec\tK14238 tRNA-Sec; tRNA Sec" }, { "name":"SPSPH_029860 tRNA-Pyl\tK14239 tRNA-Pyl; tRNA Pyl" }, { "name":"SPSPH_030010 tRNA-Pyl\tK14239 tRNA-Pyl; tRNA Pyl" }, { "name":"SPSPH_000210 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_000270 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_003950 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_007190 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_012240 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_020150 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_024490 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_024540 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_028430 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_028550 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_037630 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_041310 16S ribosomal RNA\tK01977 16SrRNA; 16S ribosomal RNA" }, { "name":"SPSPH_000230 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_000300 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_004000 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_007220 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_012270 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_024450 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_024510 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_028410 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_028540 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_037610 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_041300 23S ribosomal RNA\tK01980 23SrRNA; 23S ribosomal RNA" }, { "name":"SPSPH_000220 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_000280 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_000310 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_003980 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_004010 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_007210 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_012250 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_024460 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_028420 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_037620 5S ribosomal RNA\tK01985 5SrRNA; 5S ribosomal RNA" }, { "name":"SPSPH_030160 ssrA; (GenBank) transfer-messenger RNA, SsrA\tK15035 ssrA; transfer-messenger RNA" } ] } ] } ] }, { "name":"09190 Not Included in Pathway or Brite", "children":[ { "name":"09191 Unclassified: metabolism", "children":[ { "name":"99980 Enzymes with EC numbers", "children":[ { "name":"SPSPH_035950 pdxA2_1; (GenBank) D-threonate 4-phosphate dehydrogenase\tK22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase \/ 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]" }, { "name":"SPSPH_028790 acoA; (GenBank) Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha\tK21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]" }, { "name":"SPSPH_028780 acoB; (GenBank) Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta\tK21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]" }, { "name":"SPSPH_003920 hemA_1; (GenBank) Glutamyl-tRNA reductase\tK14330 K14330; fatty aldehyde-generating acyl-ACP reductase [EC:1.2.1.80]" }, { "name":"SPSPH_034860 coxS; (GenBank) Carbon monoxide dehydrogenase small chain\tK03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]" }, { "name":"SPSPH_012460 Oxalate oxidoreductase subunit alpha\tK19070 oorA; oxalate oxidoreductase subunit alpha [EC:1.2.7.10]" }, { "name":"SPSPH_012470 Oxalate oxidoreductase subunit beta\tK19071 oorB; oxalate oxidoreductase subunit beta [EC:1.2.7.10]" }, { "name":"SPSPH_012440 Oxalate oxidoreductase subunit delta\tK19072 oorD; oxalate oxidoreductase subunit delta [EC:1.2.7.10]" }, { "name":"SPSPH_012610 mop; (GenBank) Aldehyde oxidoreductase\tK07469 mop; aldehyde dehydrogenase (FAD-independent) [EC:1.2.8.2]" }, { "name":"SPSPH_027120 mmgC; (GenBank) Acyl-CoA dehydrogenase\tK18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-]" }, { "name":"SPSPH_037540 odh; (GenBank) Opine dehydrogenase\tK04940 odh; opine dehydrogenase [EC:1.5.1.28]" }, { "name":"SPSPH_027090 hypothetical protein\tK00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]" }, { "name":"SPSPH_005260 2-haloacrylate reductase\tK00344 qor; NADPH:quinone reductase [EC:1.6.5.5]" }, { "name":"SPSPH_026170 2-haloacrylate reductase\tK00344 qor; NADPH:quinone reductase [EC:1.6.5.5]" }, { "name":"SPSPH_029230 msrA; (GenBank) Peptide methionine sulfoxide reductase MsrA\tK07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]" }, { "name":"SPSPH_025140 msrB; (GenBank) Peptide methionine sulfoxide reductase MsrB\tK07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]" }, { "name":"SPSPH_029440 ahpC; (GenBank) Alkyl hydroperoxide reductase C\tK24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]" }, { "name":"SPSPH_014350 hndB; (GenBank) NADP-reducing hydrogenase subunit HndB\tK17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3]" }, { "name":"SPSPH_009200 hndA_2; (GenBank) NADP-reducing hydrogenase subunit HndA\tK18330 hndA; NADP-reducing hydrogenase subunit HndA [EC:1.12.1.3]" }, { "name":"SPSPH_007560 hndD_1; (GenBank) NADP-reducing hydrogenase subunit HndD\tK18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]" }, { "name":"SPSPH_009220 hndD_2; (GenBank) NADP-reducing hydrogenase subunit HndD\tK18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]" }, { "name":"SPSPH_014020 hndD_3; (GenBank) NADP-reducing hydrogenase subunit HndD\tK18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]" }, { "name":"SPSPH_014370 hndD_4; (GenBank) NADP-reducing hydrogenase subunit HndD\tK18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]" }, { "name":"SPSPH_007540 hndA_1; (GenBank) NADP-reducing hydrogenase subunit HndA\tK17999 hydC; iron-hydrogenase subunit gamma [EC:1.12.1.4]" }, { "name":"SPSPH_014000 hndA_3; (GenBank) NADP-reducing hydrogenase subunit HndA\tK17999 hydC; iron-hydrogenase subunit gamma [EC:1.12.1.4]" }, { "name":"SPSPH_030840 hydA; (GenBank) Periplasmic [Fe] hydrogenase large subunit\tK00533 E1.12.7.2L; ferredoxin hydrogenase large subunit [EC:1.12.7.2]" }, { "name":"SPSPH_030830 hydB; (GenBank) Periplasmic [Fe] hydrogenase small subunit\tK00534 E1.12.7.2S; ferredoxin hydrogenase small subunit [EC:1.12.7.2]" }, { "name":"SPSPH_002720 hypothetical protein\tK06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]" }, { "name":"SPSPH_024080 Putative superoxide reductase\tK05919 dfx; superoxide reductase [EC:1.15.1.2]" }, { "name":"SPSPH_011960 ftnA; (GenBank) Bacterial non-heme ferritin\tK02217 ftnA; ferritin [EC:1.16.3.2]" }, { "name":"SPSPH_002410 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit\tK00528 fpr; ferredoxin\/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]" }, { "name":"SPSPH_009050 grdA_1; (GenBank) Glycine\/sarcosine\/betaine reductase complex component A\tK10670 grdA; glycine\/sarcosine\/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]" }, { "name":"SPSPH_009110 grdA_3; (GenBank) Glycine\/sarcosine\/betaine reductase complex component A\tK10670 grdA; glycine\/sarcosine\/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]" }, { "name":"SPSPH_009310 grdA_5; (GenBank) Glycine\/sarcosine\/betaine reductase complex component A\tK10670 grdA; glycine\/sarcosine\/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]" }, { "name":"SPSPH_008950 grdE_1; (GenBank) Glycine reductase complex component B subunits alpha and beta\tK10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]" }, { "name":"SPSPH_009250 grdE_2; (GenBank) Glycine reductase complex component B subunits alpha and beta\tK10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]" }, { "name":"SPSPH_008960 grdB_1; (GenBank) Glycine reductase complex component B subunit gamma\tK10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]" }, { "name":"SPSPH_009260 grdB_3; (GenBank) Glycine reductase complex component B subunit gamma\tK10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]" }, { "name":"SPSPH_009140 grdD_1; (GenBank) Glycine\/sarcosine\/betaine reductase complex component C subunit alpha\tK21576 grdD; glycine\/sarcosine\/betaine reductase complex component C subunit alpha [EC:1.21.4.2 1.21.4.3 1.21.4.4]" }, { "name":"SPSPH_009340 grdD_2; (GenBank) Glycine\/sarcosine\/betaine reductase complex component C subunit alpha\tK21576 grdD; glycine\/sarcosine\/betaine reductase complex component C subunit alpha [EC:1.21.4.2 1.21.4.3 1.21.4.4]" }, { "name":"SPSPH_009130 grdC_1; (GenBank) Glycine\/sarcosine\/betaine reductase complex component C subunit beta\tK21577 grdC; glycine\/sarcosine\/betaine reductase complex component C subunit beta [EC:1.21.4.2 1.21.4.3 1.21.4.4]" }, { "name":"SPSPH_009330 grdC_2; (GenBank) Glycine\/sarcosine\/betaine reductase complex component C subunit beta\tK21577 grdC; glycine\/sarcosine\/betaine reductase complex component C subunit beta [EC:1.21.4.2 1.21.4.3 1.21.4.4]" }, { "name":"SPSPH_009160 grdI; (GenBank) Betaine reductase complex component B subunit alpha\tK21578 grdI; betaine reductase complex component B subunit alpha [EC:1.21.4.4]" }, { "name":"SPSPH_009170 grdH_1; (GenBank) Betaine reductase complex component B subunit beta\tK21579 grdH; betaine reductase complex component B subunit beta [EC:1.21.4.4]" }, { "name":"SPSPH_012730 moaA_3; (GenBank) GTP 3',8-cyclase\tK06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5]" }, { "name":"SPSPH_026680 pqqE_2; (GenBank) PqqA peptide cyclase\tK06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5]" }, { "name":"SPSPH_001270 hypothetical protein\tK04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]" }, { "name":"SPSPH_016590 cutD_1; (GenBank) Choline trimethylamine-lyase activating enzyme\tK04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]" }, { "name":"SPSPH_005100 hypothetical protein\tK04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]" }, { "name":"SPSPH_034320 pflA; (GenBank) Pyruvate formate-lyase 1-activating enzyme\tK04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]" }, { "name":"SPSPH_042660 cutD_2; (GenBank) Choline trimethylamine-lyase activating enzyme\tK04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]" }, { "name":"SPSPH_015180 hyfB; (GenBank) Hydrogenase-4 component B\tK12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]" }, { "name":"SPSPH_015200 hypothetical protein\tK12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]" }, { "name":"SPSPH_015210 ndhB; (GenBank) NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic\tK12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]" }, { "name":"SPSPH_040190 hypothetical protein\tK16868 tehB; tellurite methyltransferase [EC:2.1.1.265]" }, { "name":"SPSPH_042390 chuW; (GenBank) Anaerobilin synthase\tK21936 chuW; anaerobilin synthase [EC:2.1.1.342]" }, { "name":"SPSPH_046860 dapH_2; (GenBank) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase\tK00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]" }, { "name":"SPSPH_024310 lnt; (GenBank) Apolipoprotein N-acyltransferase\tK03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]" }, { "name":"SPSPH_029720 hypothetical protein\tK03826 yiaB_C; [protein]-L-lysine N-acetyltransferase [EC:2.3.1.338]" }, { "name":"SPSPH_034380 yncA; (GenBank) L-methionine sulfoximine\/L-methionine sulfone acetyltransferase\tK24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]" }, { "name":"SPSPH_013390 citG; (GenBank) 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase\tK13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]" }, { "name":"SPSPH_015940 larB; (GenBank) Pyridinium-3,5-biscarboxylic acid mononucleotide synthase\tK06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]" }, { "name":"SPSPH_015270 lgt_1; (GenBank) Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase\tK13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]" }, { "name":"SPSPH_016320 lgt_2; (GenBank) Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase\tK13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]" }, { "name":"SPSPH_010800 hypothetical protein\tK27270 pduO; corrinoid adenosyltransferase [EC:2.5.1.-]" }, { "name":"SPSPH_041130 apbE; (GenBank) FAD:protein FMN transferase\tK03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]" }, { "name":"SPSPH_005600 dtnK_1; (GenBank) D-threonate kinase\tK22129 dtnK; D-threonate\/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]" }, { "name":"SPSPH_035960 dtnK_2; (GenBank) D-threonate kinase\tK22129 dtnK; D-threonate\/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]" }, { "name":"SPSPH_040920 hypothetical protein\tK07030 fakA; fatty acid kinase [EC:2.7.2.18]" }, { "name":"SPSPH_019600 yqfL; (GenBank) Putative pyruvate, phosphate dikinase regulatory protein\tK09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase \/ [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]" }, { "name":"SPSPH_004120 disA; (GenBank) DNA integrity scanning protein DisA\tK07067 disA; diadenylate cyclase [EC:2.7.7.85]" }, { "name":"SPSPH_005190 cdaA; (GenBank) Cyclic di-AMP synthase CdaA\tK18672 dacA; diadenylate cyclase [EC:2.7.7.85]" }, { "name":"SPSPH_011280 selO; (GenBank) Protein adenylyltransferase SelO\tK08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]" }, { "name":"SPSPH_025950 rphC; (GenBank) rifamycin-inactivating phosphotransferase RphC\tK22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]" }, { "name":"SPSPH_026410 pigC_1; (GenBank) Prodigiosin synthesizing transferase PigC\tK22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]" }, { "name":"SPSPH_027780 pigC_2; (GenBank) Prodigiosin synthesizing transferase PigC\tK22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]" }, { "name":"SPSPH_007150 spoIIAB_1; (GenBank) Anti-sigma F factor\tK06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]" }, { "name":"SPSPH_018610 spoIIAB_3; (GenBank) Anti-sigma F factor\tK06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]" }, { "name":"SPSPH_004090 mcsB; (GenBank) Protein-arginine kinase\tK19405 mcsB; protein arginine kinase [EC:2.7.14.1]" }, { "name":"SPSPH_007490 yfdE_1; (GenBank) Acetyl-CoA:oxalate CoA-transferase\tK18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19]" }, { "name":"SPSPH_014600 uctC_1; (GenBank) Acetyl-CoA:oxalate CoA-transferase\tK18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19]" }, { "name":"SPSPH_038160 yfdE_2; (GenBank) Acetyl-CoA:oxalate CoA-transferase\tK18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19]" }, { "name":"SPSPH_025740 Thermostable monoacylglycerol lipase\tK03928 yvaK; carboxylesterase [EC:3.1.1.1]" }, { "name":"SPSPH_030210 est; (GenBank) Carboxylesterase\tK03928 yvaK; carboxylesterase [EC:3.1.1.1]" }, { "name":"SPSPH_029750 ymdB; (GenBank) O-acetyl-ADP-ribose deacetylase\tK23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]" }, { "name":"SPSPH_031880 Putative esterase\tK07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]" }, { "name":"SPSPH_003730 spoIIE; (GenBank) Stage II sporulation protein E\tK06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]" }, { "name":"SPSPH_018120 phnPP; (GenBank) Phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase\tK07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]" }, { "name":"SPSPH_046160 gdpP; (GenBank) Cyclic-di-AMP phosphodiesterase GdpP\tK22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]" }, { "name":"SPSPH_019480 pgpH; (GenBank) Cyclic-di-AMP phosphodiesterase PgpH\tK07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]" }, { "name":"SPSPH_011650 putative cyclic di-GMP phosphodiesterase\tK07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]" }, { "name":"SPSPH_001740 ycfH; (GenBank) putative metal-dependent hydrolase YcfH\tK03424 tatD; TatD DNase family protein [EC:3.1.21.-]" }, { "name":"SPSPH_000440 hypothetical protein\tK28880 namZ; peptidoglycan beta-N-acetylmuramidase [EC:3.2.1.92]" }, { "name":"SPSPH_035330 dag; (GenBank) N-acyl-D-glutamate deacylase\tK06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]" }, { "name":"SPSPH_021700 def1; (GenBank) Peptide deformylase 1\tK01462 PDF; peptide deformylase [EC:3.5.1.88]" }, { "name":"SPSPH_001070 hypothetical protein\tK22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]" }, { "name":"SPSPH_001820 Peptidoglycan-N-acetylglucosamine deacetylase\tK22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]" }, { "name":"SPSPH_002010 hypothetical protein\tK22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]" }, { "name":"SPSPH_031450 Peptidoglycan-N-acetylglucosamine deacetylase\tK22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]" }, { "name":"SPSPH_015260 yabJ_1; (GenBank) 2-iminobutanoate\/2-iminopropanoate deaminase\tK09022 ridA; 2-iminobutanoate\/2-iminopropanoate deaminase [EC:3.5.99.10]" }, { "name":"SPSPH_024930 yabJ_2; (GenBank) 2-iminobutanoate\/2-iminopropanoate deaminase\tK09022 ridA; 2-iminobutanoate\/2-iminopropanoate deaminase [EC:3.5.99.10]" }, { "name":"SPSPH_034970 RutC family protein\tK09022 ridA; 2-iminobutanoate\/2-iminopropanoate deaminase [EC:3.5.99.10]" }, { "name":"SPSPH_035290 RutC family protein\tK09022 ridA; 2-iminobutanoate\/2-iminopropanoate deaminase [EC:3.5.99.10]" }, { "name":"SPSPH_037840 yabJ_3; (GenBank) 2-iminobutanoate\/2-iminopropanoate deaminase\tK09022 ridA; 2-iminobutanoate\/2-iminopropanoate deaminase [EC:3.5.99.10]" }, { "name":"SPSPH_038140 yabJ_4; (GenBank) 2-iminobutanoate\/2-iminopropanoate deaminase\tK09022 ridA; 2-iminobutanoate\/2-iminopropanoate deaminase [EC:3.5.99.10]" }, { "name":"SPSPH_044860 ravA; (GenBank) ATPase RavA\tK03924 moxR; MoxR-like ATPase [EC:3.6.3.-]" }, { "name":"SPSPH_033910 ywlE; (GenBank) Protein-arginine-phosphatase\tK20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]" }, { "name":"SPSPH_011980 splG; (GenBank) Spore photoproduct lyase\tK03716 splB; spore photoproduct lyase [EC:4.1.99.14]" }, { "name":"SPSPH_012020 nnr; (GenBank) Bifunctional NAD(P)H-hydrate repair enzyme Nnr\tK23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase \/ NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]" }, { "name":"SPSPH_043720 ytpB; (GenBank) Tetraprenyl-beta-curcumene synthase\tK16188 ytpB; tetraprenyl-beta-curcumene synthase [EC:4.2.3.130]" }, { "name":"SPSPH_035350 dpaL; (GenBank) Diaminopropionate ammonia-lyase\tK01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]" }, { "name":"SPSPH_008250 larE_1; (GenBank) Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase\tK06864 larE; cysteine-dependent pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase [EC:4.4.1.37 4.4.1.45]" }, { "name":"SPSPH_015930 larE_2; (GenBank) Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase\tK06864 larE; cysteine-dependent pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase [EC:4.4.1.37 4.4.1.45]" }, { "name":"SPSPH_015950 larC_1; (GenBank) Pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel insertion protein\tK09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]" }, { "name":"SPSPH_006920 fldI; (GenBank) (R)-phenyllactate dehydratase activator\tK23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]" }, { "name":"SPSPH_008590 hgdC_1; (GenBank) (R)-2-hydroxyglutaryl-CoA dehydratase activating ATPase\tK23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]" }, { "name":"SPSPH_031830 hadI; (GenBank) 2-hydroxyisocaproyl-CoA dehydratase activator\tK23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]" }, { "name":"SPSPH_001910 cphA; (GenBank) Cyanophycin synthetase\tK03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]" }, { "name":"SPSPH_014640 rnfD; (GenBank) Proton-translocating ferredoxin:NAD(+) oxidoreductase complex subunit D\tK03614 rnfD; H+\/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]" }, { "name":"SPSPH_014630 rnfC; (GenBank) Proton-translocating ferredoxin:NAD(+) oxidoreductase complex subunit C\tK03615 rnfC; H+\/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]" }, { "name":"SPSPH_014680 rnfB; (GenBank) Na(+)-translocating ferredoxin:NAD(+) oxidoreductase complex subunit B\tK03616 rnfB; H+\/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]" }, { "name":"SPSPH_002360 Calcium-transporting ATPase 1\tK01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]" }, { "name":"SPSPH_021820 yloB; (GenBank) Calcium-transporting ATPase\tK01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]" }, { "name":"SPSPH_043520 Calcium-transporting ATPase 1\tK01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]" }, { "name":"SPSPH_036260 cadA_1; (GenBank) Cadmium-transporting ATPase\tK01534 zntA; Zn2+\/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]" }, { "name":"SPSPH_036690 cadA_2; (GenBank) Cadmium-transporting ATPase\tK01534 zntA; Zn2+\/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]" }, { "name":"SPSPH_025710 mgtB_1; (GenBank) Magnesium-transporting ATPase, P-type 1\tK01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]" }, { "name":"SPSPH_025800 mgtB_2; (GenBank) Magnesium-transporting ATPase, P-type 1\tK01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]" }, { "name":"SPSPH_037360 ctpC; (GenBank) Manganese-exporting P-type ATPase\tK12950 ctpC; manganese-transporting P-type ATPase C [EC:7.2.2.22]" } ] }, { "name":"99981 Carbohydrate metabolism", "children":[ { "name":"SPSPH_046290 impDH; (GenBank) Inosine-5'-monophosphate dehydrogenase\tK04767 acuB; acetoin utilization protein AcuB" }, { "name":"SPSPH_036060 lutA_6; (GenBank) Lactate utilization protein A\tK18928 lldE; L-lactate dehydrogenase complex protein LldE" }, { "name":"SPSPH_036050 lutB_2; (GenBank) Lactate utilization protein B\tK18929 lldF; L-lactate dehydrogenase complex protein LldF" }, { "name":"SPSPH_016080 lutC_1; (GenBank) Lactate utilization protein C\tK00782 lldG; L-lactate dehydrogenase complex protein LldG" }, { "name":"SPSPH_036040 lutC_2; (GenBank) Lactate utilization protein C\tK00782 lldG; L-lactate dehydrogenase complex protein LldG" }, { "name":"SPSPH_010730 ddrA; (GenBank) Diol dehydratase-reactivating factor alpha subunit\tK27264 pduG; propanediol dehydratase-reactivating factor large subunit" }, { "name":"SPSPH_010740 hypothetical protein\tK27265 pduH; propanediol dehydratase-reactivating factor small subunit" } ] }, { "name":"99982 Energy metabolism", "children":[ { "name":"SPSPH_007390 rbr3A; (GenBank) Reverse rubrerythrin-1\tK19824 fprB; rubrerythrin" }, { "name":"SPSPH_014060 fdhD; (GenBank) Sulfur carrier protein FdhD\tK02379 fdhD; FdhD protein" }, { "name":"SPSPH_014650 rsxG; (GenBank) Ion-translocating oxidoreductase complex subunit G\tK03612 rnfG; H+\/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G" }, { "name":"SPSPH_014660 rnfE; (GenBank) Ion-translocating oxidoreductase complex subunit E\tK03613 rnfE; H+\/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E" }, { "name":"SPSPH_014670 rnfA; (GenBank) Na(+)-translocating ferredoxin:NAD(+) oxidoreductase complex subunit A\tK03617 rnfA; H+\/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A" }, { "name":"SPSPH_020530 iscU; (GenBank) Iron-sulfur cluster assembly scaffold protein IscU\tK04488 iscU; nitrogen fixation protein NifU and related proteins" }, { "name":"SPSPH_015220 hycE; (GenBank) Formate hydrogenlyase subunit 5\tK15830 hycE; formate hydrogenlyase subunit 5" }, { "name":"SPSPH_008810 nifB_1; (GenBank) FeMo cofactor biosynthesis protein NifB\tK02585 nifB; nitrogen fixation protein NifB" }, { "name":"SPSPH_010090 nifB_2; (GenBank) FeMo cofactor biosynthesis protein NifB\tK02585 nifB; nitrogen fixation protein NifB" }, { "name":"SPSPH_041400 nifB_3; (GenBank) FeMo cofactor biosynthesis protein NifB\tK02585 nifB; nitrogen fixation protein NifB" }, { "name":"SPSPH_028110 hypothetical protein\tK02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE" }, { "name":"SPSPH_041420 nifD_2; (GenBank) Nitrogenase molybdenum-iron protein alpha chain\tK02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE" }, { "name":"SPSPH_027110 fixA; (GenBank) Protein FixA\tK03521 fixA; electron transfer flavoprotein beta subunit" }, { "name":"SPSPH_027080 fixX; (GenBank) Ferredoxin-like protein FixX\tK03855 fixX; ferredoxin like protein" }, { "name":"SPSPH_018640 hypothetical protein\tK09165 K09165; dodecin" } ] }, { "name":"99983 Lipid metabolism", "children":[ { "name":"SPSPH_040930 degV; (GenBank) Protein DegV\tK25232 fakB; fatty acid kinase fatty acid binding subunit" } ] }, { "name":"99984 Nucleotide metabolism" }, { "name":"99985 Amino acid metabolism", "children":[ { "name":"SPSPH_010610 ftsA_1; (GenBank) Cell division protein FtsA\tK04024 eutJ; ethanolamine utilization protein EutJ" }, { "name":"SPSPH_010670 pduV; (GenBank) Propanediol utilization protein PduV\tK04029 eutP; ethanolamine utilization protein EutP" }, { "name":"SPSPH_010660 pduU; (GenBank) Propanediol utilization protein PduU\tK04031 eutS; ethanolamine utilization protein EutS" }, { "name":"SPSPH_021980 Pyridoxal phosphate homeostasis protein\tK06997 yggS; PLP dependent protein" } ] }, { "name":"99986 Glycan metabolism" }, { "name":"99987 Cofactor metabolism", "children":[ { "name":"SPSPH_014120 mobB_1; (GenBank) Molybdopterin-guanine dinucleotide biosynthesis adapter protein\tK03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein" }, { "name":"SPSPH_023250 mobB_2; (GenBank) Molybdopterin-guanine dinucleotide biosynthesis adapter protein\tK03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein" }, { "name":"SPSPH_010820 rsxC; (GenBank) Ion-translocating oxidoreductase complex subunit C\tK27271 pduS; cobalamin reductase" } ] }, { "name":"99988 Secondary metabolism", "children":[ { "name":"SPSPH_024980 chrR; (GenBank) Quinone reductase\tK19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)" } ] }, { "name":"99999 Others", "children":[ { "name":"SPSPH_028590 hypothetical protein\tK15977 K15977; putative oxidoreductase" } ] } ] }, { "name":"09192 Unclassified: genetic information processing", "children":[ { "name":"99973 Transcription", "children":[ { "name":"SPSPH_030870 cspB; (GenBank) Cold shock protein CspB\tK03704 cspA; cold shock protein" }, { "name":"SPSPH_041460 glnB_2; (GenBank) Nitrogen regulatory protein P-II\tK02589 nifHD1; nitrogen regulatory protein PII 1" }, { "name":"SPSPH_041450 glnB_1; (GenBank) Nitrogen regulatory protein P-II\tK02590 nifHD2; nitrogen regulatory protein PII 2" }, { "name":"SPSPH_040900 yhgF; (GenBank) Protein YhgF\tK06959 tex; protein Tex" }, { "name":"SPSPH_021780 remA; (GenBank) Extracellular matrix regulatory protein A\tK09777 remA; extracellular matrix regulatory protein A" }, { "name":"SPSPH_000060 hypothetical protein\tK24648 remB; extracellular matrix regulatory protein B" } ] }, { "name":"99974 Translation", "children":[ { "name":"SPSPH_003720 pnp_1; (GenBank) Polyribonucleotide nucleotidyltransferase\tK07571 K07571; S1 RNA binding domain protein" }, { "name":"SPSPH_023050 Ribonuclease\tK07576 K07576; metallo-beta-lactamase family protein" } ] }, { "name":"99975 Protein processing", "children":[ { "name":"SPSPH_004080 mcsA; (GenBank) Protein-arginine kinase activator protein\tK19411 mcsA; protein arginine kinase activator" }, { "name":"SPSPH_013620 tig; (GenBank) Trigger factor\tK03545 tig; trigger factor" }, { "name":"SPSPH_030180 smpB; (GenBank) SsrA-binding protein\tK03664 smpB; SsrA-binding protein" }, { "name":"SPSPH_030440 hypC; (GenBank) Hydrogenase maturation factor HypC\tK04653 hypC; hydrogenase expression\/formation protein HypC" }, { "name":"SPSPH_030430 hypD; (GenBank) Hydrogenase maturation factor HypD\tK04654 hypD; hydrogenase expression\/formation protein HypD" }, { "name":"SPSPH_030420 hypE; (GenBank) Carbamoyl dehydratase HypE\tK04655 hypE; hydrogenase expression\/formation protein HypE" }, { "name":"SPSPH_030450 hypF; (GenBank) Carbamoyltransferase HypF\tK04656 hypF; hydrogenase maturation protein HypF" }, { "name":"SPSPH_017020 comM; (GenBank) Competence protein ComM\tK07391 comM; magnesium chelatase family protein" }, { "name":"SPSPH_012660 hypothetical protein\tK07402 xdhC; xanthine dehydrogenase accessory factor" }, { "name":"SPSPH_012690 pucA_2; (GenBank) putative xanthine dehydrogenase subunit A\tK07402 xdhC; xanthine dehydrogenase accessory factor" }, { "name":"SPSPH_034820 hypothetical protein\tK07402 xdhC; xanthine dehydrogenase accessory factor" }, { "name":"SPSPH_034830 hypothetical protein\tK07402 xdhC; xanthine dehydrogenase accessory factor" }, { "name":"SPSPH_035010 hypothetical protein\tK07402 xdhC; xanthine dehydrogenase accessory factor" }, { "name":"SPSPH_035050 hypothetical protein\tK07402 xdhC; xanthine dehydrogenase accessory factor" }, { "name":"SPSPH_019410 hypothetical protein\tK07403 nfeD; membrane-bound serine protease (ClpP class)" } ] }, { "name":"99976 Replication and repair", "children":[ { "name":"SPSPH_025610 DNA base-flipping protein\tK07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein" }, { "name":"SPSPH_029390 hypothetical protein\tK07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein" }, { "name":"SPSPH_014730 hypothetical protein\tK03630 radC; DNA repair protein RadC" }, { "name":"SPSPH_040630 hypothetical protein\tK03630 radC; DNA repair protein RadC" }, { "name":"SPSPH_044820 hypothetical protein\tK03630 radC; DNA repair protein RadC" }, { "name":"SPSPH_022160 hypothetical protein\tK09760 rmuC; DNA recombination protein RmuC" }, { "name":"SPSPH_017010 hypothetical protein\tK07460 yraN; putative endonuclease" }, { "name":"SPSPH_023310 hypothetical protein\tK07461 K07461; putative endonuclease" }, { "name":"SPSPH_017110 hypothetical protein\tK04096 smf; DNA processing protein" }, { "name":"SPSPH_020490 rarA; (GenBank) Replication-associated recombination protein A\tK07478 ycaJ; putative ATPase" }, { "name":"SPSPH_011740 hypothetical protein\tK07483 K07483; transposase" }, { "name":"SPSPH_011910 IS3 family transposase ISEfa8\tK07483 K07483; transposase" }, { "name":"SPSPH_023710 hypothetical protein\tK07483 K07483; transposase" }, { "name":"SPSPH_027840 hypothetical protein\tK07483 K07483; transposase" }, { "name":"SPSPH_027910 hypothetical protein\tK07483 K07483; transposase" }, { "name":"SPSPH_044340 hypothetical protein\tK07483 K07483; transposase" }, { "name":"SPSPH_000250 IS110 family transposase ISBth13\tK07486 K07486; transposase" }, { "name":"SPSPH_004250 IS110 family transposase ISBth13\tK07486 K07486; transposase" }, { "name":"SPSPH_012570 IS110 family transposase ISBth13\tK07486 K07486; transposase" }, { "name":"SPSPH_013330 IS110 family transposase ISBth13\tK07486 K07486; transposase" }, { "name":"SPSPH_014950 IS110 family transposase ISBth13\tK07486 K07486; transposase" }, { "name":"SPSPH_021850 IS110 family transposase ISBth13\tK07486 K07486; transposase" }, { "name":"SPSPH_032140 IS110 family transposase ISBth13\tK07486 K07486; transposase" }, { "name":"SPSPH_035040 IS110 family transposase ISBth13\tK07486 K07486; transposase" }, { "name":"SPSPH_036230 IS110 family transposase ISCth8\tK07486 K07486; transposase" }, { "name":"SPSPH_036910 IS110 family transposase ISBth13\tK07486 K07486; transposase" }, { "name":"SPSPH_038440 IS110 family transposase ISCth8\tK07486 K07486; transposase" }, { "name":"SPSPH_040410 IS110 family transposase ISBth13\tK07486 K07486; transposase" }, { "name":"SPSPH_040560 IS110 family transposase ISBth13\tK07486 K07486; transposase" }, { "name":"SPSPH_034120 hypothetical protein\tK07491 rayT; REP-associated tyrosine transposase" }, { "name":"SPSPH_037800 hypothetical protein\tK07491 rayT; REP-associated tyrosine transposase" }, { "name":"SPSPH_011930 IS256 family transposase ISCce2\tK07493 K07493; putative transposase" }, { "name":"SPSPH_017180 IS256 family transposase ISCce2\tK07493 K07493; putative transposase" }, { "name":"SPSPH_011730 IS3 family transposase ISMdi5\tK07497 K07497; putative transposase" }, { "name":"SPSPH_023720 IS3 family transposase ISThsp11\tK07497 K07497; putative transposase" }, { "name":"SPSPH_027850 IS3 family transposase ISMdi5\tK07497 K07497; putative transposase" }, { "name":"SPSPH_027900 IS3 family transposase ISMdi5\tK07497 K07497; putative transposase" } ] }, { "name":"99979 Viral proteins" }, { "name":"99998 Others", "children":[ { "name":"SPSPH_020080 ybaB; (GenBank) Nucleoid-associated protein YbaB\tK09747 ebfC; nucleoid-associated protein EbfC" }, { "name":"SPSPH_042750 Nucleoid-associated protein\tK09747 ebfC; nucleoid-associated protein EbfC" } ] } ] }, { "name":"09193 Unclassified: signaling and cellular processes", "children":[ { "name":"99977 Transport", "children":[ { "name":"SPSPH_001030 yifK; (GenBank) putative transport protein YifK\tK03293 TC.AAT; amino acid transporter, AAT family" }, { "name":"SPSPH_034060 rocC; (GenBank) Amino-acid permease RocC\tK03293 TC.AAT; amino acid transporter, AAT family" }, { "name":"SPSPH_043510 aroP_2; (GenBank) Aromatic amino acid transport protein AroP\tK03293 TC.AAT; amino acid transporter, AAT family" }, { "name":"SPSPH_023760 steT; (GenBank) Serine\/threonine exchanger SteT\tK03294 TC.APA; basic amino acid\/polyamine antiporter, APA family" }, { "name":"SPSPH_026340 yhdG_1; (GenBank) putative amino acid permease YhdG\tK03294 TC.APA; basic amino acid\/polyamine antiporter, APA family" }, { "name":"SPSPH_037830 yhdG_2; (GenBank) putative amino acid permease YhdG\tK03294 TC.APA; basic amino acid\/polyamine antiporter, APA family" }, { "name":"SPSPH_002460 hypothetical protein\tK03306 TC.PIT; inorganic phosphate transporter, PiT family" }, { "name":"SPSPH_003090 panF; (GenBank) Sodium\/pantothenate symporter\tK03307 TC.SSS; solute:Na+ symporter, SSS family" }, { "name":"SPSPH_012980 putP_1; (GenBank) High-affinity proline transporter PutP\tK03307 TC.SSS; solute:Na+ symporter, SSS family" }, { "name":"SPSPH_019200 hypothetical protein\tK03307 TC.SSS; solute:Na+ symporter, SSS family" }, { "name":"SPSPH_022720 yodF_1; (GenBank) putative symporter YodF\tK03307 TC.SSS; solute:Na+ symporter, SSS family" }, { "name":"SPSPH_005470 brnQ_1; (GenBank) Branched-chain amino acid transport system 2 carrier protein\tK03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family" }, { "name":"SPSPH_034170 brnQ_2; (GenBank) Branched-chain amino acid transport system 2 carrier protein\tK03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family" }, { "name":"SPSPH_000370 panS_1; (GenBank) Pantothenate precursors transporter PanS\tK03453 TC.BASS; bile acid:Na+ symporter, BASS family" }, { "name":"SPSPH_031940 panS_2; (GenBank) Pantothenate precursors transporter PanS\tK03453 TC.BASS; bile acid:Na+ symporter, BASS family" }, { "name":"SPSPH_040160 panS_3; (GenBank) Pantothenate precursors transporter PanS\tK03453 TC.BASS; bile acid:Na+ symporter, BASS family" }, { "name":"SPSPH_035580 hyuP; (GenBank) Hydantoin permease\tK03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family" }, { "name":"SPSPH_010550 ybhI; (GenBank) Inner membrane protein YbhI\tK03319 TC.DASS; divalent anion:Na+ symporter, DASS family" } ] }, { "name":"99978 Cell growth", "children":[ { "name":"SPSPH_013850 Iron-sulfur cluster carrier protein\tK07321 cooC; CO dehydrogenase maturation factor" }, { "name":"SPSPH_013910 hypothetical protein\tK07321 cooC; CO dehydrogenase maturation factor" }, { "name":"SPSPH_037280 hypothetical protein\tK07321 cooC; CO dehydrogenase maturation factor" }, { "name":"SPSPH_042710 hypothetical protein\tK06317 bofA; inhibitor of the pro-sigma K processing machinery" }, { "name":"SPSPH_044080 hypothetical protein\tK06333 cotJB; spore coat protein JB" }, { "name":"SPSPH_044070 ydbD; (GenBank) putative manganese catalase\tK06334 cotJC; spore coat protein JC" }, { "name":"SPSPH_046630 hypothetical protein\tK06346 jag; spoIIIJ-associated protein" }, { "name":"SPSPH_025060 pxpC; (GenBank) 5-oxoprolinase subunit C\tK06350 kipA; antagonist of KipI" }, { "name":"SPSPH_025070 pxpB; (GenBank) 5-oxoprolinase subunit B\tK06351 kipI; inhibitor of KinA" }, { "name":"SPSPH_018800 spmA; (GenBank) Spore maturation protein A\tK06373 spmA; spore maturation protein A" }, { "name":"SPSPH_018810 spmB; (GenBank) Spore maturation protein B\tK06374 spmB; spore maturation protein B" }, { "name":"SPSPH_018600 spoIIAA; (GenBank) Anti-sigma F factor antagonist\tK06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)" }, { "name":"SPSPH_018290 spoIIM; (GenBank) Stage II sporulation protein M\tK06384 spoIIM; stage II sporulation protein M" }, { "name":"SPSPH_004140 hypothetical protein\tK06385 spoIIP; stage II sporulation protein P" }, { "name":"SPSPH_018980 hypothetical protein\tK06385 spoIIP; stage II sporulation protein P" }, { "name":"SPSPH_019260 hypothetical protein\tK06385 spoIIP; stage II sporulation protein P" }, { "name":"SPSPH_025300 hypothetical protein\tK06385 spoIIP; stage II sporulation protein P" }, { "name":"SPSPH_016550 hypothetical protein\tK06387 spoIIR; stage II sporulation protein R" }, { "name":"SPSPH_020730 hypothetical protein\tK06390 spoIIIAA; stage III sporulation protein AA" }, { "name":"SPSPH_020740 spoIIIAB; (GenBank) Stage III sporulation protein AB\tK06391 spoIIIAB; stage III sporulation protein AB" }, { "name":"SPSPH_020750 hypothetical protein\tK06392 spoIIIAC; stage III sporulation protein AC" }, { "name":"SPSPH_020760 hypothetical protein\tK06393 spoIIIAD; stage III sporulation protein AD" }, { "name":"SPSPH_020770 spoIIIAE; (GenBank) Stage III sporulation protein AE\tK06394 spoIIIAE; stage III sporulation protein AE" }, { "name":"SPSPH_020780 hypothetical protein\tK06395 spoIIIAF; stage III sporulation protein AF" }, { "name":"SPSPH_020800 hypothetical protein\tK06396 spoIIIAG; stage III sporulation protein AG" }, { "name":"SPSPH_020810 hypothetical protein\tK06397 spoIIIAH; stage III sporulation protein AH" }, { "name":"SPSPH_019030 spoIVA; (GenBank) Stage IV sporulation protein A\tK06398 spoIVA; stage IV sporulation protein A" }, { "name":"SPSPH_009410 hypothetical protein\tK06405 spoVAC; stage V sporulation protein AC" }, { "name":"SPSPH_018650 hypothetical protein\tK06405 spoVAC; stage V sporulation protein AC" }, { "name":"SPSPH_009400 spoVAD_1; (GenBank) Stage V sporulation protein AD\tK06406 spoVAD; stage V sporulation protein AD" }, { "name":"SPSPH_018660 spoVAD_2; (GenBank) Stage V sporulation protein AD\tK06406 spoVAD; stage V sporulation protein AD" }, { "name":"SPSPH_009390 hypothetical protein\tK06407 spoVAE; stage V sporulation protein AE" }, { "name":"SPSPH_018670 hypothetical protein\tK06407 spoVAE; stage V sporulation protein AE" }, { "name":"SPSPH_018690 hypothetical protein\tK06407 spoVAE; stage V sporulation protein AE" }, { "name":"SPSPH_018700 hypothetical protein\tK06408 spoVAF; stage V sporulation protein AF" }, { "name":"SPSPH_020980 hypothetical protein\tK06413 spoVK; stage V sporulation protein K" }, { "name":"SPSPH_000160 hypothetical protein\tK06415 spoVR; stage V sporulation protein R" }, { "name":"SPSPH_016840 spoVS_1; (GenBank) Stage V sporulation protein S\tK06416 spoVS; stage V sporulation protein S" }, { "name":"SPSPH_018100 spoVS_2; (GenBank) Stage V sporulation protein S\tK06416 spoVS; stage V sporulation protein S" }, { "name":"SPSPH_000990 hypothetical protein\tK06418 sspA_B_C_D; small acid-soluble spore protein A\/B\/C\/D" }, { "name":"SPSPH_012120 sspD; (GenBank) Small, acid-soluble spore protein D\tK06418 sspA_B_C_D; small acid-soluble spore protein A\/B\/C\/D" }, { "name":"SPSPH_020130 hypothetical protein\tK06418 sspA_B_C_D; small acid-soluble spore protein A\/B\/C\/D" }, { "name":"SPSPH_024060 hypothetical protein\tK06418 sspA_B_C_D; small acid-soluble spore protein A\/B\/C\/D" }, { "name":"SPSPH_034780 hypothetical protein\tK06423 sspF; small acid-soluble spore protein F" }, { "name":"SPSPH_001390 sspH; (GenBank) Small, acid-soluble spore protein H\tK06425 sspH; small acid-soluble spore protein H (minor)" }, { "name":"SPSPH_029710 sspP; (GenBank) Small, acid-soluble spore protein P\tK06433 sspP; small acid-soluble spore protein P (minor)" }, { "name":"SPSPH_001800 yabG; (GenBank) Sporulation-specific protease YabG\tK06436 yabG; spore coat assemly protein" }, { "name":"SPSPH_019460 hypothetical protein\tK06438 yqfD; similar to stage IV sporulation protein" }, { "name":"SPSPH_022170 hypothetical protein\tK06295 gerKA; spore germination protein KA" }, { "name":"SPSPH_022190 gerBC; (GenBank) Spore germination protein B3\tK06297 gerKC; spore germination protein KC" }, { "name":"SPSPH_003630 gerBA; (GenBank) Spore germination protein B1\tK06310 yndD; spore germination protein" }, { "name":"SPSPH_003650 gerAC_1; (GenBank) Spore germination protein A3\tK06312 yndF; spore germination protein" }, { "name":"SPSPH_003660 gerAC_2; (GenBank) Spore germination protein A3\tK06312 yndF; spore germination protein" } ] }, { "name":"99993 Cell motility" }, { "name":"99995 Signaling proteins", "children":[ { "name":"SPSPH_023040 typA; (GenBank) GTP-binding protein TypA\/BipA\tK06207 typA; GTP-binding protein" }, { "name":"SPSPH_023680 hypothetical protein\tK07166 K07166; ACT domain-containing protein" }, { "name":"SPSPH_019470 PhoH-like protein\tK06217 phoH; phosphate starvation-inducible protein PhoH and related proteins" }, { "name":"SPSPH_042320 hypothetical protein\tK07175 phoH2; PhoH-like ATPase" }, { "name":"SPSPH_000140 hypothetical protein\tK07180 prkA; serine protein kinase" }, { "name":"SPSPH_026910 hypothetical protein\tK09767 yajQ; cyclic-di-GMP-binding protein" } ] }, { "name":"99992 Structural proteins", "children":[ { "name":"SPSPH_006510 hypothetical protein\tK06142 hlpA; outer membrane protein" }, { "name":"SPSPH_029170 hypothetical protein\tK06142 hlpA; outer membrane protein" }, { "name":"SPSPH_033430 hypothetical protein\tK06142 hlpA; outer membrane protein" }, { "name":"SPSPH_033450 hypothetical protein\tK06142 hlpA; outer membrane protein" }, { "name":"SPSPH_027750 emrA_2; (GenBank) Colistin resistance protein EmrA\tK01993 ABC-2.TX; HlyD family secretion protein" }, { "name":"SPSPH_005710 macA_1; (GenBank) Macrolide export protein MacA\tK02005 ABC.CD.TX; HlyD family secretion protein" }, { "name":"SPSPH_008060 aaeA; (GenBank) p-hydroxybenzoic acid efflux pump subunit AaeA\tK02005 ABC.CD.TX; HlyD family secretion protein" }, { "name":"SPSPH_034220 ccmE; (GenBank) Cytochrome c-type biogenesis protein CcmE\tK02197 ccmE; cytochrome c-type biogenesis protein CcmE" }, { "name":"SPSPH_010690 pduB; (GenBank) Propanediol utilization protein PduB\tK27263 pduB; bacterial microcompartment shell protein" }, { "name":"SPSPH_010750 hypothetical protein\tK27267 pduK; bacterial microcompartment shell protein" }, { "name":"SPSPH_010830 hypothetical protein\tK27272 pduT; bacterial microcompartment shell protein" } ] }, { "name":"99994 Others", "children":[ { "name":"SPSPH_003490 phoU_1; (GenBank) Phosphate-specific transport system accessory protein PhoU\tK02039 phoU; phosphate transport system protein" }, { "name":"SPSPH_023180 phoU_2; (GenBank) Phosphate-specific transport system accessory protein PhoU\tK02039 phoU; phosphate transport system protein" }, { "name":"SPSPH_014450 hypothetical protein\tK03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]" }, { "name":"SPSPH_023860 hypothetical protein\tK07219 K07219; putative molybdopterin biosynthesis protein" } ] } ] }, { "name":"09194 Poorly characterized", "children":[ { "name":"99996 General function prediction only", "children":[ { "name":"SPSPH_042920 elaA; (GenBank) Protein ElaA\tK02348 elaA; ElaA protein" }, { "name":"SPSPH_016680 hypothetical protein\tK07001 K07001; NTE family protein" }, { "name":"SPSPH_021160 hypothetical protein\tK07001 K07001; NTE family protein" }, { "name":"SPSPH_015130 yfhP; (GenBank) putative protein YfhP\tK07038 K07038; inner membrane protein" }, { "name":"SPSPH_045900 Putative phosphoribosyl transferase\tK07100 K07100; putative phosphoribosyl transferase" }, { "name":"SPSPH_042870 hypothetical protein\tK04750 phnB; PhnB protein" }, { "name":"SPSPH_002920 lemA_1; (GenBank) Protein LemA\tK03744 lemA; LemA protein" }, { "name":"SPSPH_017030 lemA_2; (GenBank) Protein LemA\tK03744 lemA; LemA protein" }, { "name":"SPSPH_030560 hypothetical protein\tK08972 K08972; putative membrane protein" }, { "name":"SPSPH_039430 hypothetical protein\tK06193 phnA; protein PhnA" } ] }, { "name":"99997 Function unknown", "children":[ { "name":"SPSPH_006440 moaA_1; (GenBank) GTP 3',8-cyclase\tK06871 K06871; uncharacterized protein" }, { "name":"SPSPH_030460 moaA_5; (GenBank) GTP 3',8-cyclase\tK06871 K06871; uncharacterized protein" }, { "name":"SPSPH_017040 hypothetical protein\tK06872 K06872; uncharacterized protein" }, { "name":"SPSPH_011950 hypothetical protein\tK06888 K06888; uncharacterized protein" }, { "name":"SPSPH_010060 hypothetical protein\tK06889 K06889; uncharacterized protein" }, { "name":"SPSPH_026480 hypothetical protein\tK06889 K06889; uncharacterized protein" }, { "name":"SPSPH_027640 menH_1; (GenBank) 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase\tK06889 K06889; uncharacterized protein" }, { "name":"SPSPH_045270 hypothetical protein\tK06903 W; Bacteriophage baseplate protein W" }, { "name":"SPSPH_045290 hypothetical protein\tK06905 D; Bacteriophage probable baseplate hub protein" }, { "name":"SPSPH_045350 hypothetical protein\tK06907 FI; Bacteriophage tail sheath protein" }, { "name":"SPSPH_045340 hypothetical protein\tK06908 FII; Bacteriophage tail tube protein" }, { "name":"SPSPH_013510 hypothetical protein\tK06923 K06923; uncharacterized protein" }, { "name":"SPSPH_016270 yccU; (GenBank) putative protein YccU\tK06929 K06929; uncharacterized protein" }, { "name":"SPSPH_035740 hypothetical protein\tK06933 K06933; uncharacterized protein" }, { "name":"SPSPH_016900 hypothetical protein\tK06960 K06960; uncharacterized protein" }, { "name":"SPSPH_004370 yacP; (GenBank) putative protein YacP\tK06962 K06962; uncharacterized protein" }, { "name":"SPSPH_013490 hypothetical protein\tK07005 K07005; uncharacterized protein" }, { "name":"SPSPH_025340 hypothetical protein\tK07005 K07005; uncharacterized protein" }, { "name":"SPSPH_027800 hypothetical protein\tK07005 K07005; uncharacterized protein" }, { "name":"SPSPH_007320 hypothetical protein\tK07013 K07013; uncharacterized protein" }, { "name":"SPSPH_034440 hypothetical protein\tK07013 K07013; uncharacterized protein" }, { "name":"SPSPH_041820 hypothetical protein\tK07032 K07032; uncharacterized protein" }, { "name":"SPSPH_041690 hypothetical protein\tK07074 K07074; uncharacterized protein" }, { "name":"SPSPH_043370 hypothetical protein\tK07078 K07078; uncharacterized protein" }, { "name":"SPSPH_005330 hypothetical protein\tK07079 K07079; uncharacterized protein" }, { "name":"SPSPH_034600 hypothetical protein\tK07079 K07079; uncharacterized protein" }, { "name":"SPSPH_042170 hypothetical protein\tK07079 K07079; uncharacterized protein" }, { "name":"SPSPH_011140 hypothetical protein\tK07080 K07080; uncharacterized protein" }, { "name":"SPSPH_006160 Putative two-component membrane permease complex subunit\tK07089 K07089; uncharacterized protein" }, { "name":"SPSPH_011060 yfcA; (GenBank) putative membrane transporter protein YfcA\tK07090 K07090; uncharacterized protein" }, { "name":"SPSPH_012370 hypothetical protein\tK07090 K07090; uncharacterized protein" }, { "name":"SPSPH_018150 hypothetical protein\tK07090 K07090; uncharacterized protein" }, { "name":"SPSPH_018160 hypothetical protein\tK07090 K07090; uncharacterized protein" }, { "name":"SPSPH_034390 hypothetical protein\tK07090 K07090; uncharacterized protein" }, { "name":"SPSPH_042490 hypothetical protein\tK07090 K07090; uncharacterized protein" }, { "name":"SPSPH_021530 yfcE; (GenBank) Phosphodiesterase YfcE\tK07095 K07095; uncharacterized protein" }, { "name":"SPSPH_031780 hypothetical protein\tK07095 K07095; uncharacterized protein" }, { "name":"SPSPH_041680 hypothetical protein\tK07095 K07095; uncharacterized protein" }, { "name":"SPSPH_000770 hypothetical protein\tK07098 K07098; uncharacterized protein" }, { "name":"SPSPH_015300 hypothetical protein\tK07099 K07099; uncharacterized protein" }, { "name":"SPSPH_032200 niaR; (GenBank) putative transcription repressor NiaR\tK07105 K07105; uncharacterized protein" }, { "name":"SPSPH_008820 hypothetical protein\tK07112 K07112; uncharacterized protein" }, { "name":"SPSPH_013380 hypothetical protein\tK07120 K07120; uncharacterized protein" }, { "name":"SPSPH_040220 hypothetical protein\tK07129 K07129; uncharacterized protein" }, { "name":"SPSPH_043030 hypothetical protein\tK07133 K07133; uncharacterized protein" }, { "name":"SPSPH_005210 hypothetical protein\tK07137 K07137; uncharacterized protein" }, { "name":"SPSPH_006060 hypothetical protein\tK07137 K07137; uncharacterized protein" }, { "name":"SPSPH_024680 hypothetical protein\tK07138 K07138; uncharacterized protein" }, { "name":"SPSPH_026420 hypothetical protein\tK07138 K07138; uncharacterized protein" }, { "name":"SPSPH_024560 hypothetical protein\tK07139 K07139; uncharacterized protein" }, { "name":"SPSPH_046450 ydfK; (GenBank) putative membrane protein YdfK\tK07150 K07150; uncharacterized protein" }, { "name":"SPSPH_022640 hypothetical protein\tK07161 K07161; uncharacterized protein" }, { "name":"SPSPH_046650 yidD; (GenBank) Putative membrane protein insertion efficiency factor\tK08998 K08998; uncharacterized protein" }, { "name":"SPSPH_019400 yqeY; (GenBank) putative protein YqeY\tK09117 K09117; uncharacterized protein" }, { "name":"SPSPH_026130 hypothetical protein\tK09126 K09126; uncharacterized protein" }, { "name":"SPSPH_021930 hypothetical protein\tK09131 K09131; uncharacterized protein" }, { "name":"SPSPH_036750 hypothetical protein\tK09133 K09133; uncharacterized protein" }, { "name":"SPSPH_025370 hypothetical protein\tK09137 K09137; uncharacterized protein" }, { "name":"SPSPH_010250 hypothetical protein\tK09138 K09138; uncharacterized protein" }, { "name":"SPSPH_010330 hypothetical protein\tK09138 K09138; uncharacterized protein" }, { "name":"SPSPH_005090 hypothetical protein\tK09141 K09141; uncharacterized protein" }, { "name":"SPSPH_023670 hypothetical protein\tK09157 K09157; uncharacterized protein" }, { "name":"SPSPH_020330 hypothetical protein\tK09163 K09163; uncharacterized protein" }, { "name":"SPSPH_043590 hypothetical protein\tK09707 K09707; uncharacterized protein" }, { "name":"SPSPH_021680 hypothetical protein\tK09729 K09729; uncharacterized protein" }, { "name":"SPSPH_035100 hypothetical protein\tK09740 K09740; uncharacterized protein" }, { "name":"SPSPH_017540 hypothetical protein\tK09749 K09749; uncharacterized protein" }, { "name":"SPSPH_029330 hypothetical protein\tK09764 K09764; uncharacterized protein" }, { "name":"SPSPH_001360 hypothetical protein\tK09766 K09766; uncharacterized protein" }, { "name":"SPSPH_043410 hypothetical protein\tK09768 K09768; uncharacterized protein" }, { "name":"SPSPH_001670 hypothetical protein\tK09770 K09770; uncharacterized protein" }, { "name":"SPSPH_020900 hypothetical protein\tK09775 K09775; uncharacterized protein" }, { "name":"SPSPH_000150 hypothetical protein\tK09786 K09786; uncharacterized protein" }, { "name":"SPSPH_016870 hypothetical protein\tK09787 K09787; uncharacterized protein" }, { "name":"SPSPH_027560 hypothetical protein\tK09793 K09793; uncharacterized protein" }, { "name":"SPSPH_026880 hypothetical protein\tK09798 K09798; uncharacterized protein" }, { "name":"SPSPH_012940 26 kDa periplasmic immunogenic protein\tK09807 K09807; uncharacterized protein" }, { "name":"SPSPH_015030 cvfB; (GenBank) Conserved virulence factor B\tK00243 K00243; uncharacterized protein" }, { "name":"SPSPH_001330 yaaA; (GenBank) Peroxide stress resistance protein YaaA\tK09861 K09861; uncharacterized protein" }, { "name":"SPSPH_003540 hypothetical protein\tK09940 K09940; uncharacterized protein" }, { "name":"SPSPH_002520 hypothetical protein\tK01163 K01163; uncharacterized protein" }, { "name":"SPSPH_014890 hypothetical protein\tK07584 ysxB; uncharacterized protein" }, { "name":"SPSPH_002450 hypothetical protein\tK07220 K07220; uncharacterized protein" }, { "name":"SPSPH_017730 hypothetical protein\tK07742 ylxR; uncharacterized protein" } ] } ] } ] } ] }