+D	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Prokaryotic Defense System - Actinobacillus porcitonsillarum</h2>
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A<b>CRISPR-Cas system</b>
B  Universal Cas proteins
C    DDU33_05760 subtype I-C CRISPR-associated endonuclease Cas1	K15342 cas1; CRISP-associated protein Cas1 
C    DDU33_05765 cas2; CRISPR-associated endonuclease Cas2	K09951 cas2; CRISPR-associated protein Cas2 
B  Type I CRISPR-Cas system
C    Type I signiture cas proteins
D      DDU33_05710 CRISPR-associated helicase/endonuclease Cas3	K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] 
C    Subtype I-A factors
D      DDU33_05750 cas4; CRISPR-associated protein Cas4	K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] 
C    Subtype I-B factors
D      DDU33_05750 cas4; CRISPR-associated protein Cas4	K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] 
C    Subtype I-C factors
D      DDU33_05740 cas8c; type I-C CRISPR-associated protein Cas8c/Csd1	K19117 csd1; CRISPR-associated protein Csd1 
D      DDU33_05745 cas7c; type I-C CRISPR-associated protein Cas7/Csd2	K19118 csd2; CRISPR-associated protein Csd2 
D      DDU33_05750 cas4; CRISPR-associated protein Cas4	K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] 
D      DDU33_05735 cas5c; type I-C CRISPR-associated protein Cas5	K19119 cas5d; CRISPR-associated protein Cas5d 
C    Subtype I-D factors
D      DDU33_05750 cas4; CRISPR-associated protein Cas4	K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] 
C    Subtype I-E factors
C    Subtype I-F factors
C    Subtype I-U factors
B  Type II CRISPR-Cas system
C    Type II signiture cas proteins
C    Subtype II-A factors
C    Subtype II-B factors
D      DDU33_05750 cas4; CRISPR-associated protein Cas4	K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] 
B  Type III CRISPR-Cas system
C    Type III signiture cas proteins
C    Subtype III-A factors
C    Subtype III-B factors
C    Subtype III-U factors
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A<b>Restriction and modification system (R-M system)</b>
B  Type I R-M system
C    DDU33_02930 DEAD/DEAH box helicase	K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] 
C    DDU33_02920 restriction endonuclease subunit S	K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] 
C    DDU33_02910 type I restriction-modification system subunit M	K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] 
B  Type II R-M system
C    Restriction endonucleases
C    DNA methyltransferases
D      DDU33_06240 DNA adenine methylase	K06223 dam; DNA adenine methylase [EC:2.1.1.72] 
D      DDU33_06385 DNA (cytosine-5-)-methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
B  Type III R-M system
B  Type IV R-M system
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A<b>Toxin-antitoxin system (TA system)</b>
B  Type I TA system
C    Hok-Sok
C    SymE-SymR
C    Ldr-Rdl
C    TisB-IstR
C    Ibs-Sib
C    ShoB-OhsC
C    RalR-RalA
B  Type II TA system
C    MazF-MazE
C    ChpB-ChpS
C    YhaV-PrlF
C    RelE/StbE-RelB/StbD
D      DDU33_07675 type II toxin-antitoxin system RelE/ParE family toxin	K06218 relE; mRNA interferase RelE/StbE 
D      DDU33_02800 type II toxin-antitoxin system mRNA interferase toxin	K06218 relE; mRNA interferase RelE/StbE 
D      DDU33_09295 plasmid stabilization system protein	K06218 relE; mRNA interferase RelE/StbE 
D      DDU33_07680 ribbon-helix-helix domain-containing protein	K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB 
D      DDU33_09300 type II toxin-antitoxin system RelB/DinJ family antitoxin	K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB 
D      DDU33_02805 plasmid stabilization protein	K18923 stbD; antitoxin StbD 
C    YafQ-dinJ
C    YoeB-YefM
C    HipA-HipB
D      DDU33_02470 kinase	K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] 
C    HicA-HicB
C    YafO-YafN
C    Hha-TomB
C    PspC-PspB
C    CcdB-CcdA
C    ParE-ParD
C    Doc-Phd
C    HigB-HigA
D      DDU33_08660 type II toxin-antitoxin system HigB family toxin	K19166 higB; mRNA interferase HigB [EC:3.1.-.-] 
D      DDU33_08655 transcriptional regulator	K18831 higA; HTH-type transcriptional regulator / antitoxin HigA 
C    MqsR-MqsA
C    VapC-VapB
D      DDU33_03515 AbrB/MazE/SpoVT family DNA-binding domain-containing protein	K18829 mvpT; antitoxin VapB 
C    PezT-PezA
C    YobL-YobK
C    YokI-YokJ
C    YqcG-YqcF
C    YxiD-YxxD
C    FitB-FitA
D      DDU33_02880 VapC toxin family PIN domain ribonuclease	K07062 fitB; toxin FitB [EC:3.1.-.-] 
C    BC_0920-BC_0921
C    Type II TA system related factors
D      DDU33_04355 cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ 
D      DDU33_09225 hypothetical protein	K03531 ftsZ; cell division protein FtsZ 
D      DDU33_08885 rod shape-determining protein	K03569 mreB; rod shape-determining protein MreB and related proteins 
D      DDU33_07420 parC; DNA topoisomerase IV subunit A	K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] 
D      DDU33_00205 parE; DNA topoisomerase IV subunit B	K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] 
D      DDU33_04760 glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] 
B  Type III TA system
C    AbiQ system
B  Type IV TA system
C    YeeV-YeeU
C    CptA-CptB
D      DDU33_03825 hypothetical protein	K09159 cptB; antitoxin CptB 
B  Type V TA system
C    GhoT-GhoS
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A<b>DNA phosphothiolation system</b>
B  Sulfur modification proteins
C    DDU33_09425 IscS subfamily cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7] 
B  DNA phosphorothioation-dependent restriction proteins
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#Last updated: October 9, 2020