+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Buchnera aphidicola Sg (Schizaphis graminum)

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D BUsg_249 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D BUsg_554 orn; hypothetical oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C BUsg_248 era; GTP-binding protein Era K03595 era; GTPase C BUsg_376 yhbZ; hypothetical 43.3 kd GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C BUsg_192 dksA; DNAK suppressor protein K06204 dksA; DnaK suppressor protein C BUsg_366 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA C BUsg_447 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB C BUsg_040 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D BUsg_134 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D BUsg_319 yjjT; hypothetical 37.6 kDa protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D BUsg_395 yggJ; hypothetical 26.9 kDa protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D BUsg_218 yabC; hypothetical 36.0 kDa protein K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D BUsg_083 yraL; hypothetical 31.3 kDa protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D BUsg_565 yhiQ; hypothetical 26.9 kDa protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] C 23S rRNA modification factors D BUsg_370 ftsJ; cell division protein FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D BUsg_351 ycbY; hypothetical 78.9 kDa protein K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D BUsg_275 yfgB; hypothetical 43.1 kDa protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D BUsg_271 yciL; hypothetical 30.2 kDa protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D BUsg_336 rluC; ribosomal large subunit pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D BUsg_388 rluD; ribosomal large subunit pseudouridine synthase d K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C BUsg_382 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM B rRNA processing factors C BUsg_249 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C BUsg_335 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] C BUsg_530 yqgF; hypothetical 15.2 kDa protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] B rRNA helicases C BUsg_360 deaD; ATP-dependent RNA helicase DEAD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:3.6.4.13] B GTPases C BUsg_248 era; GTP-binding protein Era K03595 era; GTPase C BUsg_582 engA; probable GPT-binding protein EngA K03977 engA; GTPase C BUsg_376 yhbZ; hypothetical 43.3 kd GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-] B Other maturation factors C BUsg_475 yrdC; hypothetical 20.8 kDa protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C BUsg_364 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C BUsg_427 ybeY; hypothetical 17.5 kDa protein K07042 ybeY; probable rRNA maturation factor C BUsg_185 ychF; probable GTP-binding protein In trea-pth K06942 ychF; ribosome-binding ATPase # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 4, 2022