+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Citrobacter rodentium

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins D ROD_20401 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D ROD_26151 dcm; putative prophage DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E ROD_25131 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) D ROD_20571 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS D ROD_17711 hns; DNA-binding protein H-NS (Histone-like protein HLP-II) K03746 hns; DNA-binding protein H-NS D ROD_p2271 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS D ROD_31391 stpA; DNA-binding protein K11685 stpA; DNA-binding protein StpA C HU (heat unstable protein) D ROD_37521 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha D ROD_04951 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) D ROD_13431 ihfA; Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha D ROD_09801 ihfB; integration host factor beta-subunit (IHF-beta) K05788 ihfB; integration host factor subunit beta C Other nucleoid associated proteins D ROD_10601 cbpA; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein D ROD_10591 cbpM; chaperone-modulator protein K18997 cbpM; chaperone modulatory protein CbpM D ROD_50831 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D ROD_40251 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D ROD_46841 diaA; DnaA initiator-associating factor for replication initiation (putative phophosugar-binding protein) K12961 diaA; DnaA initiator-associating protein D ROD_10281 conserved hypothetical protein K11940 hspQ; heat shock protein HspQ D ROD_08141 dps; DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein D ROD_45531 fis; DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D ROD_32321 hfq; host factor-I protein (HF-I) K03666 hfq; host factor-I protein D ROD_49151 iciA; chromosome intitiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D ROD_09531 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D ROD_23171 ndpA; nucleoid-associated protein K06899 ndpA; nucleoid-associated protein B Chromosome partitioning proteins C MukBEF complex D ROD_09921 mukB; chromosome partition protein K03632 mukB; chromosome partition protein MukB D ROD_09911 mukE; chromosome partition protein K03804 mukE; chromosome partition protein MukE D ROD_09901 mukF; chromosome partition protein K03633 mukF; chromosome partition protein MukF C Condensin-like complex C Divisome proteins D ROD_01001 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D ROD_30611 ftsB; cell division protein K05589 ftsB; cell division protein FtsB D ROD_43581 ftsE; cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D ROD_18611 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D ROD_00901 ftsI; peptidoglycan synthetase (penicillin-binding protein 3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D ROD_09541 ftsK; dna translocase ftsk K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D ROD_00891 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D ROD_38131 ftsN; cell division protein K03591 ftsN; cell division protein FtsN D ROD_00991 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D ROD_00951 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW D ROD_43591 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein D ROD_01011 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D ROD_23711 zipA; cell division protein K03528 zipA; cell division protein ZipA D ROD_49231 zapA; conserved hypothetical protein K09888 zapA; cell division protein ZapA D ROD_38201 zapB; Cell division protein zapB K09892 zapB; cell division protein ZapB D ROD_10081 conserved hypothetical protein K18657 zapC; cell division protein ZapC D ROD_01071 conserved hypothetical protein K18778 zapD; cell division protein ZapD D ROD_45911 putative ATP/GTP-binding protein K06916 zapE; cell division protein ZapE D ROD_32601 putative exported protein K07269 ytfB; cell division protein YtfB D ROD_23921 amiA; probable N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D ROD_28591 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D ROD_32291 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D ROD_05181 acrA; acriflavin resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly D ROD_18381 minC; septum site determining protein K03610 minC; septum site-determining protein MinC D ROD_18391 minD; septum site determining protein K03609 minD; septum site-determining protein MinD D ROD_18401 minE; Cell division topological specificity factor K03608 minE; cell division topological specificity factor D ROD_10201 sulA; cell division inhibitor K13053 sulA; cell division inhibitor SulA D ROD_41741 ttk; TetR-family transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator C Other chromosome partitioning proteins D ROD_06951 seqA; negative modulator of initiation of replication K03645 seqA; negative modulator of initiation of replication D ROD_45651 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D ROD_45661 mreC; rod shape-determining protein K03570 mreC; rod shape-determining protein MreC D ROD_45671 mreD; rod shape-determining protein K03571 mreD; rod shape-determining protein MreD D ROD_06521 mrdB; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D ROD_p1511 putative plasmid partition protein K03496 parA; chromosome partitioning protein D ROD_p2211 parA; putative plasmid partitioning protein K03496 parA; chromosome partitioning protein D ROD_35651 parC; topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D ROD_35771 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D ROD_39991 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D ROD_40001 gidB; glucose inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D ROD_39401 xerC; tyrosine recombinase K03733 xerC; integrase/recombinase XerC D ROD_49391 xerD; tyrosine recombinase K04763 xerD; integrase/recombinase XerD D ROD_22351 mrp; conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D ROD_44481 fic; cell filamentation protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D ROD_33731 conserved hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D ROD_38961 engB; probable GTP-binding protein K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: January 31, 2023