+E Transcription factors KO
#
Transcription Factors - Escherichia coli K-12 MG1655
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D b1961 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C GRAS
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D b0064 araC; DNA-binding transcriptional dual regulator AraC K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D b3906 rhaR; DNA-binding transcriptional activator RhaR K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D b3905 rhaS; DNA-binding transcriptional activator RhaS K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D b1735 chbR; DNA-binding transcriptional dual regulator ChbR K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D b4116 adiY; DNA-binding transcriptional activator AdiY K03755 adiY; AraC family transcriptional regulator, transcriptional activator of adiA
D b2437 eutR; putative AraC-type transcriptional regulator EutR K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D b0564 appY; DLP12 prophage; DNA-binding transcriptional activator AppY K07780 appY; AraC family transcriptional regulator, transcriptional regulator required for anaerobic and stationary phase induction of genes
D b0566 envY; DNA-binding transcriptional activator EnvY K11920 envY; AraC family transcriptional regulator
D b4062 soxS; DNA-binding transcriptional dual regulator SoxS K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D b1531 marA; DNA-binding transcriptional dual regulator MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D b4396 rob; DNA-binding transcriptional dual regulator Rob K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D b1384 feaR; DNA-binding transcriptional activator FeaR K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB
D b0305 rclR; DNA-binding transcriptional activator RclR K21746 rclR; AraC family transcriptional regulator, reactive chlorine species (RCS)-specific activator of rcl operon
D b3515 gadW; DNA-binding transcriptional dual regulator GadW K21906 gadW; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
D b3516 gadX; DNA-binding transcriptional dual regulator GadX K21905 gadX; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
D b4118 melR; DNA-binding transcriptional dual regulator MelR K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein
D b1790 nimR; DNA-binding transcriptional repressor NimR K25495 nimR; AraC family transcriptional regulator, regulator of nimT
D b2213 ada; DNA-binding transcriptional dual regulator/DNA repair protein Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
C LysR family
D b0254 perR; CP4-6 prophage; putative transcriptional regulator PerR K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D b2808 gcvA; DNA-binding transcriptional dual regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D b3773 ilvY; DNA-binding transcriptional dual regulator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D b3828 metR; DNA-binding transcriptional dual regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D b0020 nhaR; DNA-binding transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D b3961 oxyR; DNA-binding transcriptional dual regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D b2916 argP; DNA-binding transcriptional dual regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D b0076 leuO; DNA-binding transcriptional dual regulator LeuO K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D b2537 hcaR; DNA-binding transcriptional dual regulator HcaR K05817 hcaR; LysR family transcriptional regulator, hca operon transcriptional activator
D b3118 tdcA; DNA-binding transcriptional activator TdcA K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator
D b0504 allS; DNA-binding transcriptional activator AllS K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon
D b0338 cynR; DNA-binding transcriptional dual regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D b1275 cysB; DNA-binding transcriptional dual regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D b1987 cbl; DNA-binding transcriptional activator Cbl K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D b2364 dsdC; DNA-binding transcriptional dual regulator DsdC K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D b1339 abgR; putative LysR-type DNA-binding transcriptional regulator AbgR K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D b1799 dmlR; DNA-binding transcriptional regulator DmlR K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D b1988 nac; DNA-binding transcriptional dual regulator Nac K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D b4327 hypT; DNA-binding transcriptional dual regulator HypT K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D b3243 aaeR; LysR-type transcriptional regulator AaeR K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D b3060 ttdR; DNA-binding transcriptional activator Dan K21742 ttdR; LysR family transcriptional regulator, transcriptional activator for ttdABT operon
D b4480 hdfR; DNA-binding transcriptional dual regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D b1328 pgrR; DNA-binding transcriptional repressor PgrR K24082 pgrR; LysR family transcriptional regulator, regulator of peptidoglycan recycling
C DeoR family
D b0840 deoR; DNA-binding transcriptional repressor DeoR K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D b3131 agaR; DNA-binding transcriptional repressor AgaR K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D b2805 fucR; DNA-binding transcriptional activator FucR K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D b2707 srlR; DNA-binding transcriptional repressor SrlR K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D b4191 ulaR; DNA-binding transcriptional repressor UlaR K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D b3884 csqR; DNA-binding transcriptional dual regulator CsqR K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor
C LacI family
D b0345 lacI; DNA-binding transcriptional repressor LacI K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D b2151 galS; DNA-binding transcriptional dual regulator GalS K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D b2837 galR; DNA-binding transcriptional dual regulator GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D b3569 xylR; DNA-binding transcriptional dual regulator XylR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D b3753 rbsR; DNA-binding transcriptional dual regulator RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D b3934 cytR; DNA-binding transcriptional repressor CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D b0080 cra; DNA-binding transcriptional dual regulator Cra K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D b4241 treR; DNA-binding transcriptional repressor TreR K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D b2714 ascG; DNA-binding transcriptional repressor AscG K03487 ascG; LacI family transcriptional regulator, asc operon repressor
D b1658 purR; DNA-binding transcriptional repressor PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D b3438 gntR; DNA-binding transcriptional repressor GntR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D b4264 idnR; DNA-binding transcriptional dual regulator IdnR K06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator
D b3075 ebgR; DNA-binding transcriptional repressor EbgR K12113 ebgR; LacI family transcriptional regulator, ebg operon repressor
D b1620 malI; DNA-binding transcriptional repressor MalI K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein
C GntR family
D b3684 yidP; putative DNA-binding transcriptional regulator YidP K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D b4102 phnF; putative transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D b3375 frlR; putative DNA-binding transcriptional regulator FrlR K10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator
D b0730 mngR; DNA-binding transcriptional repressor MngR K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor
D b1187 fadR; DNA-binding transcriptional dual regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D b0113 pdhR; DNA-binding transcriptional dual regulator PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D b2980 glcC; DNA-binding transcriptional dual regulator GlcC K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator
D b4324 uxuR; DNA-binding transcriptional repressor UxuR K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D b3094 exuR; DNA-binding transcriptional repressor ExuR K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D b3604 lldR; DNA-binding transcriptional dual regulator LldR K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D b4479 dgoR; DNA-binding transcriptional regulator DgoR K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D b3226 nanR; DNA-binding transcriptional dual regulator NanR K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
D b1450 mcbR; DNA-binding transcriptional dual regulator McbR K13654 mcbR; GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator
D b2664 glaR; DNA-binding transcriptional repressor GlaR K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D b1540 ydfH; DNA-binding transcriptional repressor YdfH K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor
D b4357 lgoR; putative DNA-binding transcriptional regulator LgoR K23015 lgoR; GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism
C TetR/AcrR family
D b0313 betI; DNA-binding transcriptional repressor BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D b0464 acrR; DNA-binding transcriptional repressor AcrR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D b3641 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D b1013 rutR; DNA-binding transcriptional dual regulator RutR K09017 rutR; TetR/AcrR family transcriptional regulator
D b1649 nemR; DNA-binding transcriptional repressor NemR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D b1618 uidR; DNA-binding transcriptional repressor UidR K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon
D b3264 envR; DNA-binding transcriptional repressor EnvR K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor
D b4251 bdcR; putative transcriptional regulator BdcR K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA
D b1111 comR; DNA-binding transcriptional repressor ComR K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D b3963 fabR; DNA-binding transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D b0796 cecR; DNA-binding transcriptional dual regulator CecR K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D b0846 rcdA; DNA-binding transcriptional regulator RcdA K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
C Lrp/AsnC family
D b3743 asnC; DNA-binding transcriptional dual regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D b0889 lrp; DNA-binding transcriptional dual regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D b0447 decR; DNA-binding transcriptional activator DecR K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
C LuxR family
D b1916 sdiA; DNA-binding transcriptional dual regulator SdiA K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D b0294 ecpR; DNA-binding transcriptional dual regulator MatA K21963 ecpR; LuxR family transcriptional regulator, Mat/Ecp fimbriae transcriptional regulator
D b1951 rcsA; DNA-binding transcriptional activator RcsA K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D b1040 csgD; DNA-binding transcriptional dual regulator CsgD K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D b3507 dctR; putative DNA-binding transcriptional regulator DctR K21901 dctR; LuxR family transcriptional regulator, dicarboxylate transport regulator
D b4366 bglJ; DNA-binding transcriptional regulator BglJ K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides
D b3418 malT; DNA-binding transcriptional activator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D b3512 gadE; DNA-binding transcriptional activator GadE K21907 gadE; LuxR family transcriptional regulator, glutamate-dependent acid resistance regulator
C MarR family
D b1530 marR; DNA-binding transcriptional repressor MarR K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D b1642 slyA; DNA-binding transcriptional dual regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D b2684 mprA; DNA-binding transcriptional repressor MprA K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
C MerR family
D b0487 cueR; DNA-binding transcriptional dual regulator CueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D b3292 zntR; DNA-binding transcriptional activator ZntR K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D b4063 soxR; DNA-binding transcriptional dual regulator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D b2127 mlrA; DNA-binding transcriptional activator MlrA K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes
D b1162 bluR; DNA-binding transcriptional repressor BluR K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes
C Fur family
D b0683 fur; DNA-binding transcriptional dual regulator Fur K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D b4046 zur; DNA-binding transcriptional repressor Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
C IclR family
D b4018 iclR; DNA-binding transcriptional repressor IclR K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D b0346 mhpR; DNA-binding transcriptional activator MhpR K05818 mhpR; IclR family transcriptional regulator, mhp operon transcriptional activator
D b0506 allR; DNA-binding transcriptional repressor AllR K10973 allR; IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
D b0272 xynR; CP4-6 prophage; DNA-binding transcriptional repressor XynR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D b1827 kdgR; DNA-binding transcriptional repressor KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D b3574 plaR; DNA-binding transcriptional repressor PlaR K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor
C CRP/FNR family
D b3357 crp; DNA-binding transcriptional dual regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D b1334 fnr; DNA-binding transcriptional dual regulator FNR K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D b2163 yeiL; putative DNA-binding transcriptional regulator YeiL K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
C Rrf2 family
D b2531 iscR; DNA-binding transcriptional dual regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D b4178 nsrR; DNA-binding transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
D b3501 arsR; DNA-binding transcriptional repressor ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
C XRE family
D b1434 sutR; DNA-binding transcriptional dual regulator SutR K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
C PadR family
C Other families
D b0817 mntR; DNA-binding transcriptional dual regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D b4089 alsR; DNA-binding transcriptional repressor AlsR K23238 rpiR; RpiR family transcriptional regulator, repressor of rpiB and als operon
D b2427 murR; DNA-binding transcriptional dual regulator MurR K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D b1853 yebK; DNA-binding transcriptional repressor YebK K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D b3973 birA; DNA-binding transcriptional repressor/biotin-[acetyl-CoA-carboxylase] ligase BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D b3261 fis; DNA-binding transcriptional dual regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D b4393 trpR; DNA-binding transcriptional repressor TrpR K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D b0330 prpR; DNA-binding transcriptional dual regulator PrpR K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D b3188 sfsB; putative transcriptional regulator SfsB K07724 ner; Ner family transcriptional regulator
D b0069 sgrR; DNA-binding transcriptional dual regulator SgrR K11925 sgrR; SgrR family transcriptional regulator
D b4390 nadR; DNA-binding transcriptional repressor/NMN adenylyltransferase NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D b3021 mqsA; antitoxin of the MqsRA toxin-antitoxin system/DNA-binding transcriptional repressor MqsA K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D b1299 puuR; DNA-binding transcriptional repressor PuuR K14056 puuR; HTH-type transcriptional regulator, repressor for puuD
D b1508 hipB; antitoxin/DNA-binding transcriptional repressor HipB K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D b1570 dicA; DNA-binding transcriptional dual regulator DicA K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D b3082 higA; antitoxin/DNA-binding transcriptional repressor HigA K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D b2491 hyfR; DNA-binding transcriptional activator HyfR K12146 hyfR; hydrogenase-4 transcriptional activator
D b2709 norR; DNA-binding transcriptional dual regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D b2731 fhlA; DNA-binding transcriptional activator FhlA K15836 fhlA; formate hydrogenlyase transcriptional activator
D b0162 cdaR; DNA-binding transcriptional activator CdaR K02647 cdaR; carbohydrate diacid regulator
D b0761 modE; DNA-binding transcriptional dual regulator ModE K02019 modE; molybdate transport system regulatory protein
D b3555 yiaG; putative DNA-binding transcriptional regulator YiaG K07726 K07726; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D b3481 nikR; DNA-binding transcriptional repressor NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
C Other families
D b3938 metJ; DNA-binding transcriptional repressor MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D b1014 putA; fused DNA-binding transcriptional repressor/proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D b1564 relB; Qin prophage; antitoxin/DNA-binding transcriptional repressor RelB K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
B Other transcription factors
C BglG family
D b3723 bglG; transcriptional antiterminator BglG K03488 licT; beta-glucoside operon transcriptional antiterminator
D b3897 frvR; putative transcriptional regulator FrvR K18531 frvR; putative frv operon regulatory protein
C Others
D b0357 frmR; DNA-binding transcriptional repressor FrmR K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D b2105 rcnR; DNA-binding transcriptional repressor RcnR K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression
D b0435 bolA; DNA-binding transcriptional dual regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D b3842 rfaH; transcription antiterminator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D b3237 argR; DNA-binding transcriptional dual regulator ArgR K03402 argR; transcriptional regulator of arginine metabolism
D b0676 nagC; DNA-binding transcriptional dual regulator NagC K02565 nagC; N-acetylglucosamine repressor
D b1594 mlc; DNA-binding transcriptional repressor Mlc K15545 mlc; transcriptional regulator of PTS gene
D b3601 mtlR; transcriptional repressor MtlR K02562 mtlR; mannitol operon repressor
D b1323 tyrR; DNA-binding transcriptional dual regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D b4133 cadC; DNA-binding transcriptional activator CadC K03765 cadC; transcriptional activator of cad operon
D b2852 ygeH; putative transcriptional regulator YgeH K22486 hilA; transcriptional regulator HilA, main transcriptional regulator of SPI1
D b2479 gcvR; putative transcriptional regulator GcvR K03567 gcvR; glycine cleavage system transcriptional repressor
D b1399 paaX; DNA-binding transcriptional repressor PaaX K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D b1303 pspF; DNA-binding transcriptional dual regulator PspF K03974 pspF; psp operon transcriptional activator
D b1306 pspC; phage shock protein C K03973 pspC; phage shock protein C
D b1512 lsrR; DNA-binding transcriptional repressor LsrR K11531 lsrR; lsr operon transcriptional repressor
D b1201 dhaR; DNA-binding transcriptional dual regulator DhaR K05880 dhaR; transcriptional activator for dhaKLM operon
D b0610 rnk; nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase
D b2624 alpA; CP4-57 prophage; DNA-binding transcriptional activator AlpA K07733 alpA; prophage regulatory protein
D b2948 yqgE; DUF179 domain-containing protein YqgE K07735 algH; putative transcriptional regulator
D b0034 caiF; DNA-binding transcriptional activator CaiF K08277 caiF; transcriptional activator CaiF
D b0145 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D b0413 nrdR; NrdR transcriptional repressor K07738 nrdR; transcriptional repressor NrdR
D b3422 rtcR; DNA-binding transcriptional activator RtcR K14414 rtcR; transcriptional regulatory protein RtcR
D b1569 dicC; Qin prophage; DNA-binding transcriptional regulator for DicB K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
D b0081 mraZ; DNA-binding transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
D b3023 ygiV; DNA-binding transcriptional repressor YgiV K07471 ygiV; probable transcriptional regulator
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: January 22, 2025
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Classification taken and modified from TRANSFAC 7.0