+E
#
Transcription Machinery - Escherichia marmotae
%
!
AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
#
AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E C1192_14380 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E C1192_18210 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E C1192_18215 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E C1192_17385 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E C1192_20175 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
E C1192_21930 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
E C1192_22645 rpoE; ECF RNA polymerase sigma-E factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E C1192_15235 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
E C1192_13755 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
E C1192_02285 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
E C1192_11370 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C Other transcription-related factors
D RNA polymerase-associated proteins
E C1192_12680 RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
E C1192_13580 nusA; transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
E C1192_10580 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
E C1192_18180 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
E C1192_13890 stringent starvation protein A K03599 sspA; stringent starvation protein A
E C1192_13885 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
E C1192_22650 anti-sigma-E factor RseA K03597 rseA; sigma-E factor negative regulatory protein RseA
E C1192_22655 sigma-E factor regulatory protein RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
E C1192_22660 SoxR reducing system protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC
D Transcription elongation factors
E C1192_12215 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
E C1192_13645 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
E C1192_14880 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D Transcription termination factor
E C1192_16655 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
E C1192_11975 Rho-binding antiterminator K19000 rof; Rho-binding antiterminator
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024