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Transcription Machinery - Escherichia coli O26:H11 11368 (EHEC)
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E ECO26_4397 rpoA; RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E ECO26_5095 rpoB; RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E ECO26_5096 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E ECO26_4951 rpoZ; RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E ECO26_4169 rpoD; RNA polymerase, sigma 70 factor K03086 rpoD; RNA polymerase primary sigma factor
E ECO26_3810 rpoS; RNA polymerase, sigma S factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
E ECO26_3620 rpoE; RNA polymerase, sigma 24 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E ECO26_5461 probable RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E ECO26_4548 rpoH; RNA polymerase, sigma 32 factor K03089 rpoH; RNA polymerase sigma-32 factor
E ECO26_4306 rpoN; RNA polymerase, sigma 54 factor K03092 rpoN; RNA polymerase sigma-54 factor
E ECO26_2814 fliA; RNA polymerase, sigma 28 factor K02405 fliA; RNA polymerase sigma factor FliA
E ECO26_0286 lafS; predicted RNA polymerase, sigma 28 factor K02405 fliA; RNA polymerase sigma factor FliA
C Other transcription-related factors
D RNA polymerase-associated proteins
E ECO26_0061 hepA; RNA polymerase-associated helicase protein K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
E ECO26_4275 nusA; transcription termination/antitermination L factor NusA K02600 nusA; transcription termination/antitermination protein NusA
E ECO26_0448 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
E ECO26_5090 nusG; transcription termination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
E ECO26_4328 sspA; regulator of transcription; stringent starvation protein A (SspA) K03599 sspA; stringent starvation protein A
E ECO26_4327 sspB; ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
E ECO26_3619 rseA; anti-sigma factor RseA K03597 rseA; sigma-E factor negative regulatory protein RseA
E ECO26_3618 rseB; anti-sigma factor RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
E ECO26_3617 rseC; RseC protein K03803 rseC; sigma-E factor negative regulatory protein RseC
D Transcription elongation factors
E ECO26_0148 dksA; DNA-binding transcriptional regulator DskA of rRNA transcription, DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
E ECO26_4285 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
E ECO26_4494 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D Transcription termination factor
E ECO26_4804 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
E ECO26_0191 rof; Rho-dependent transcription termination modulator Rof K19000 rof; Rho-binding antiterminator
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024