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Transcription Machinery - Klebsiella pneumoniae Kp52.145
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E BN49_0421 rpoA; highly similar to DNA-directed RNA polymerase subunit alpha Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TEU8) K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E BN49_4475 rpoB; highly similar to DNA-directed RNA polymerase subunit beta from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TGP0) K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E BN49_4474 rpoC; highly similar to DNA-directed RNA polymerase subunit beta' from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TGP1) K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E BN49_0110 rpoZ; highly similar to DNA-directed RNA polymerase subunit omega from Escherichia coli O150:H5 strain SE15 (tr|D2NCQ0) K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E BN49_0632 rpoD; highly similar to RNA polymerase sigma factor from Escherichia coli O157:H7 (tr|Q8XAN5) K03086 rpoD; RNA polymerase primary sigma factor
E BN49_1023 rpoS; highly similar to RNA polymerase sigma factor from Escherichia coli strain UTI89 - UPEC (tr|Q1R7V1) K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
E BN49_4107 rpoE; highly similar to RNA polymerase sigma-E factor from Salmonella typhimurium (sp|P0A2F0) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E BN49_pII0049 unnamed protein product; highly similar to probable RNA polymerase sigma factor FecI from Escherichia coli strain K12 (sp|P23484) K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E BN49_0290 rpoH; highly similar to RNA polymerase sigma-32 factor from Citrobacter freundii (sp|P11539) K03089 rpoH; RNA polymerase sigma-32 factor
E BN49_0508 rpoN; highly similar to RNA polymerase sigma-54 factor from Klebsiella oxytoca (sp|P06223) K03092 rpoN; RNA polymerase sigma-54 factor
C Other transcription-related factors
D RNA polymerase-associated proteins
E BN49_4282 rapA; highly similar to RNA polymerase-associated protein RapA from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T4J7) K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
E BN49_0540 nusA; highly similar to transcription elongation protein from Escherichia coli O44:H18 strain 042 - EAEC (tr|D3GXR0) K02600 nusA; transcription termination/antitermination protein NusA
E BN49_1342 nusB; highly similar to N utilization substance protein B homolog from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T5E9) K03625 nusB; transcription antitermination protein NusB
E BN49_4480 nusG; highly similar to transcription antitermination protein NusG from Salmonella typhimurium (sp|P0AA02) K02601 nusG; transcription termination/antitermination protein NusG
E BN49_0492 sspA; highly similar to stringent starvation protein A from Escherichia coli strain UTI89 - UPEC (tr|Q1R6B2) K03599 sspA; stringent starvation protein A
E BN49_0493 sspB; highly similar to stringent starvation protein B from Escherichia coli O55:H7 strain CB9615 - EPEC (tr|D3QSU2) K03600 sspB; stringent starvation protein B
E BN49_2456 unnamed protein product; highly similar to putative uncharacterized protein from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (tr|A6T828) K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
E BN49_4106 rseA; highly similar to sigma-E factor negative regulatory protein from Escherichia coli strain UTI89 - UPEC (tr|Q1R8G0) K03597 rseA; sigma-E factor negative regulatory protein RseA
E BN49_4105 rseB; highly similar to sigma-E factor regulatory protein RseB from Escherichia coli O6 (tr|Q8CVB5) K03598 rseB; sigma-E factor negative regulatory protein RseB
E BN49_4104 rseC; highly similar to sigma-E factor regulatory protein RseC from Escherichia coli strain K12 (sp|P46187) K03803 rseC; sigma-E factor negative regulatory protein RseC
D Transcription elongation factors
E BN49_3568 unnamed protein product; highly similar to putative transcriptional regulator from Escherichia coli (tr|C0J1H7) K06204 dksA; DnaK suppressor protein
E BN49_4195 dksA; highly similar to DnaK suppressor protein from Escherichia coli strain UTI89 - UPEC (tr|Q1RG45) K06204 dksA; DnaK suppressor protein
E BN49_0528 greA; highly similar to transcription elongation factor GreA from Salmonella typhimurium (sp|P64281) K03624 greA; transcription elongation factor GreA
E BN49_0341 greB; highly similar to transcription elongation factor GreB from Escherichia coli strain K12 (sp|P30128) K04760 greB; transcription elongation factor GreB
D Transcription termination factor
E BN49_4576 rho; highly similar to transcription termination factor Rho from Escherichia coli strain UTI89 - UPEC (tr|Q1R4F5) K03628 rho; transcription termination factor Rho
E BN49_4135 yaeO; highly similar to inhibitor of Rho from Escherichia coli O157:H7 (tr|Q8X8W7) K19000 rof; Rho-binding antiterminator
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 4, 2022