+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Klebsiella pneumoniae Kp52.145

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb group proteins D PRC1 (polycomb repressive complex 1) D PRC2-EZH1 complex D PRC2-EZH2 complex D AUTS2-polycomb complex D Other polycomb group proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins D BN49_3534 dcm; highly similar to cytosine-specific methyltransferase from Escherichia coli strain UTI89 - UPEC (tr|Q1RAH9) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E BN49_4101 rnc; highly similar to ribonuclease 3 from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TCI1) K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) D BN49_pII0094 unnamed protein product; similar to putative histone family protein nucleoid-structuring protein H-NS from Pantoea sp (tr|C8Q7K8) K03746 hns; DNA-binding protein H-NS D BN49_3310 hns; highly similar to Hns transcriptional dual regulator from Escherichia coli strain UTI89 - UPEC (tr|Q1RCK0) K03746 hns; DNA-binding protein H-NS D BN49_1125 unnamed protein product; highly similar to DNA-binding protein H-NS from Escherichia coli O55:H7 strain CB9615 - EPEC (tr|D3QPM0) K11685 stpA; DNA-binding protein StpA C HU (heat unstable protein) D BN49_1376 hupB; highly similar to DNA-binding protein HU-beta, NS1 (HU-1) from Escherichia coli strain UTI89 - UPEC (tr|Q1RF95) K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) D BN49_3282 unnamed protein product; highly similar to integration host factor subunit alpha from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TAI1) K04764 ihfA; integration host factor subunit alpha D BN49_2038 ihfB; highly similar to integration host factor subunit beta from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T704) K05788 ihfB; integration host factor subunit beta C Other nucleoid associated proteins D BN49_4921 cbpA; highly similar to curved DNA-binding protein from Citrobacter koseri (sp|A8AI78) K05516 cbpA; curved DNA-binding protein D BN49_4922 cbpM; highly similar to putative chaperone-modulator protein CbpM from Escherichia coli E22 (tr|B3I7K0) K18997 cbpM; chaperone modulatory protein CbpM D BN49_4345 rob; highly similar to right origin-binding protein from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (tr|A6TI10) K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D BN49_1154 unnamed protein product; highly similar to putative transcriptional regulator, AraC family from Enterobacter cloacae (tr|D6DNF1) K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D BN49_0001 dnaA; highly similar to chromosomal replication initiator protein DnaA from Klebsiella pneumoniae strain 342 (sp|B5XT51) K02313 dnaA; chromosomal replication initiator protein D BN49_0560 diaD; highly similar to DnaA initiator-associating protein DiaA from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TEG8) K12961 diaA; DnaA initiator-associating protein D BN49_2089 hspQ; highly similar to heat shock protein HspQ from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T765) K11940 hspQ; heat shock protein HspQ D BN49_1891 dps; highly similar to DNA protection during starvation protein from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T6Q6) K04047 dps; starvation-inducible DNA-binding protein D BN49_0450 fis; highly similar to global DNA-binding transcriptional dual regulator Fis from Escherichia coli O111:H-strain 11128 - EHEC (tr|C8UGL9) K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D BN49_4862 hfq; highly similar to host factor-I protein from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TH87) K03666 hfq; host factor-I protein D BN49_0741 iciA; highly similar to chromosome initiation inhibitor from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TDS6) K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D BN49_3317 unnamed protein product; highly similar to putative transcriptional regulator, AsnC family from Enterobacter cancerogenus (tr|D2ZDA6) K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D BN49_2020 lrp; highly similar to leucine-responsive regulatory protein from Salmonella typhimurium (sp|P0A2S0) K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D BN49_2057 unnamed protein product; highly similar to putative leucine response regulator from Salmonella typhimurium (tr|Q8ZQB2) K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D BN49_3840 ndpA; highly similar to nucleoid-associated protein NdpA from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TBS0) K06899 ndpA; nucleoid-associated protein B Chromosome partitioning proteins C MukBEF complex D BN49_2050 mukB; highly similar to chromosome partition protein MukB from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T716) K03632 mukB; chromosome partition protein MukB D BN49_2049 mukE; highly similar to chromosome partition protein MukE from Escherichia coli O157:H7 strain EC4115 - EHEC (tr|B5YT57) K03804 mukE; chromosome partition protein MukE D BN49_2048 mukF; highly similar to chromosome partition protein MukF from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T714) K03633 mukF; chromosome partition protein MukF C Condensin-like complex C Divisome proteins D BN49_4242 ftsA; highly similar to ATP-binding cell division protein, septation process, complexes with FtsZ, associated with junctions of inner and outer membranes from Escherichia coli strain UTI89 - UPEC (tr|Q1RGA1) K03590 ftsA; cell division protein FtsA D BN49_1016 ftsB; highly similar to cell division protein FtsB homolog from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TD40) K05589 ftsB; cell division protein FtsB D BN49_0288 ftsE; highly similar to cell division ATP-binding membrane protein FtsE from Escherichia coli strain UTI89 - UPEC (tr|Q1R5F7) K09812 ftsE; cell division transport system ATP-binding protein D BN49_3444 ftsI; highly similar to penicillin-binding protein-3 from Salmonella choleraesuis (tr|Q57NH5) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D BN49_4252 pbp3; highly similar to peptidoglycan synthetase (penicillin-binding protein 3) from Escherichia coli O44:H18 (tr|D3H465) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D BN49_2021 ftsK; highly similar to DNA translocase FtsK from Shigella flexneri (sp|Q83S00) K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D BN49_4253 ftsL; highly similar to putative cell division protein FtsL from Escherichia coli O6:K15:H31 (tr|Q0TLQ6) K03586 ftsL; cell division protein FtsL D BN49_4628 ftsN; highly similar to essential cell division protein from Escherichia coli O157:H7 (tr|Q8X789) K03591 ftsN; cell division protein FtsN D BN49_4243 ftsQ; highly similar to membrane anchored protein involved in growth of wall at septum from Escherichia coli O7:K1 strain IAI39 - ExPEC (tr|B7NHJ9) K03589 ftsQ; cell division protein FtsQ D BN49_4247 ftsW; highly similar to cell division protein FtsW from Escherichia coli strain UTI89 - UPEC (tr|Q1RGA6) K03588 ftsW; cell division protein FtsW D BN49_0289 ftsX; highly similar to cell division membrane protein from Escherichia coli strain UTI89 - UPEC (tr|Q1R5F8) K09811 ftsX; cell division transport system permease protein D BN49_4241 unnamed protein product; highly similar to cell division protein FtsZ from Escherichia coli strain UTI89 - UPEC (tr|Q1RGA0) K03531 ftsZ; cell division protein FtsZ D BN49_3969 zipA; highly similar to cell division protein ZipA homolog from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TC48) K03528 zipA; cell division protein ZipA D BN49_0745 zapA; highly similar to cell division protein ZapA from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TDS2) K09888 zapA; cell division protein ZapA D BN49_0098 zapB; highly similar to cell division protein ZapB from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TFR0) K09892 zapB; cell division protein ZapB D BN49_2070 unnamed protein product; highly similar to putative uncharacterized protein from Escherichia coli (tr|C3TFV2) K18657 zapC; cell division protein ZapC D BN49_4235 unnamed protein product; highly similar to UPF0289 protein KPN78578_01040 from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T4P4) K18778 zapD; cell division protein ZapD D BN49_2918 unnamed protein product; weakly similar to putative ATPase, AFG1 family from Pseudomonas aeruginosa (tr|A6VBS5) K06916 zapE; cell division protein ZapE D BN49_0489 unnamed protein product; highly similar to putative ATPase, AFG1 family from Escherichia coli strain SMS-3-5 - SECEC (tr|B1LGJ8) K06916 zapE; cell division protein ZapE D BN49_4834 oapA; similar to putative opacity-associated protein A from Escherichia coli (tr|C6ECD8). It presents the OapA N-terminal and LysM domains according to Pfam. K07269 ytfB; cell division protein YtfB D BN49_0883 amiC; highly similar to N-acetylmuramoyl-L-alanine amidase AmiC from Escherichia coli strain UTI89 - UPEC (tr|Q1R7J7) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D BN49_3989 amiA; highly similar to N-acetylmuramoyl-l-alanine amidase I from Escherichia coli O150:H5 strain SE15 (tr|D2NL12) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D BN49_4865 amiB; highly similar to putative N-acetylmuramoyl-L-alanine amidase AmiB from Escherichia coli strain UTI89 - UPEC (tr|Q1R391) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D BN49_1419 acrA; highly similar to acriflavine resistance protein A from Escherichia coli O6 (tr|Q8CWA9) K03585 acrA; membrane fusion protein, multidrug efflux system D BN49_0069 unnamed protein product; highly similar to acriflavine resistance protein A from Escherichia coli O6 K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly D BN49_3423 minC; highly similar to probable septum site-determining protein MinC from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TAX3) K03610 minC; septum site-determining protein MinC D BN49_3424 minD; highly similar to cell division inhibitor, membrane ATPase MinD from Escherichia coli strain UTI89 - UPEC (tr|Q1RCS2) K03609 minD; septum site-determining protein MinD D BN49_3425 minE; highly similar to cell division topological specificity factor from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TAX5) K03608 minE; cell division topological specificity factor D BN49_2081 sulA; highly similar to cell division inhibitor SulA from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T752) K13053 sulA; cell division inhibitor SulA D BN49_0124 slmA; highly similar to HTH-type protein SlmA from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TFN2) K05501 slmA; TetR/AcrR family transcriptional regulator C Other chromosome partitioning proteins D BN49_1764 seqA; highly similar to negative modulator of initiation of replication from Escherichia coli O44:H18 strain 042 - EAEC (tr|D3GXD9) K03645 seqA; negative modulator of initiation of replication D BN49_0461 mreB; highly similar to putative rod shape-determining protein MreB from Citrobacter sp. (tr|C1MA49) K03569 mreB; rod shape-determining protein MreB and related proteins D BN49_0462 mreC; highly similar to putative rod shape-determining protein MreC from Escherichia coli strain K12 (sp|P16926) K03570 mreC; rod shape-determining protein MreC D BN49_0463 mreD; highly similar to putative rod shape-determining protein MreD from Salmonella dublin (tr|B5FIV0) K03571 mreD; rod shape-determining protein MreD D BN49_1726 rodA; highly similar to rod shape-determining protein RodA from Escherichia coli O55:H7 strain CB9615 - EPEC (tr|D3QLS6) K05837 rodA; rod shape determining protein RodA D BN49_pI0104 parA; highly similar to putative plasmid partition protein A from Salmonella enterica (tr|B5P979) K03496 parA; chromosome partitioning protein D BN49_pII0013 sopA; highly similar to plasmid partition protein A from Escherichia coli strain K12 (sp|P62556) K03496 parA; chromosome partitioning protein D BN49_pI0015 unnamed protein product; highly similar to putative ParB-like partition protein from Salmonella enterica (tr|B5MTX8) K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BN49_pII0012 sopB; highly similar to plasmid partition protein B from Escherichia coli strain K12 (sp|P62558) K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BN49_2600 unnamed protein product; similar to putative chromosome partitioning protein gp35 from Burkholderia phage KS9 (tr|C7BGF1) K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BN49_0671 parC; highly similar to DNA topoisomerase 4 subunit A from Shigella flexneri (sp|P0AFI4) K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D BN49_0664 parE; highly similar to DNA topoisomerase 4 subunit B from Salmonella typhimurium (sp|P0A2I5) K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D BN49_5061 mnmG; highly similar to tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TG45) K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D BN49_5062 rsmG; highly similar to ribosomal RNA small subunit methyltransferase G from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TG44) K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D BN49_4553 xerC; highly similar to tyrosine recombinase XerC from Salmonella typhimurium (sp|P55888) K03733 xerC; integrase/recombinase XerC D BN49_0766 xerD; highly similar to site-specific tyrosine recombinase from Escherichia coli O7:K1 strain IAI39 - ExPEC (tr|B7NW35) K04763 xerD; integrase/recombinase XerD D BN49_3776 unnamed protein product; highly similar to putative ATPase from Escherichia coli strain UTI89 - UPEC (tr|Q1R9V9) K03593 mrp; ATP-binding protein involved in chromosome partitioning D BN49_0370 unnamed protein product; highly similar to probable adenosine monophosphate-protein transferase Fic from Salmonella typhimurium (sp|P20751) K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D BN49_4689 engB; highly similar to probable GTP-binding protein EngB from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TG68) K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: January 17, 2023