+D #

  Transfer RNA Biogenesis - Mannheimia haemolytica M42548

% ! AEukaryotic type B 5'processing factors C Ribonucrease P B 3'processing and CCA adding factors C 3'processing factors D MHH_c13060 putative Rna-like ribonuclease K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] C CCA adding factors D MHH_c15740 cca; multifunctional protein Cca K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B tRNA spricing factors C tRNA splicing endonuclease complex C tRNA splicing ligase complex C Other tRNA splicing factors B tRNA transport factors C tRNA export factors C tRNA import factors B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D MHH_c00880 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MHH_c05240 proS; proline--tRNA ligase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D MHH_c10040 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D MHH_c15900 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MHH_c13830 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D MHH_c21110 glnS; glutaminyl-tRNA synthetase GlnS K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D MHH_c03110 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MHH_c16540 lysS; lysyl-tRNA synthetase LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D MHH_c11870 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] C Other AARSs D MHH_c19120 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D MHH_c21030 asnS; asparaginyl-tRNA synthetase AsnS K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D MHH_c28490 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D MHH_c15930 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D MHH_c26960 cysS; cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D MHH_c01080 valS; valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D MHH_c00040 hisS; histidine--tRNA ligase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D MHH_c19420 pheS; phenylalanyl-tRNA synthetase - subunit alpha PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D MHH_c19430 pheT; phenylalanyl-tRNA synthetase - beta subunit PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D MHH_c10400 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MHH_c02840 trpS; tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C Trans-editing factors D MHH_c02330 dtd; D-tyrosyl-tRNA(Tyr) deacylase Dtd K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] C AARS associated factors B tRNA modification factors C Deaminases C Dihydorouridine synthases C Methylthiotransferase C Methyltransferases D MHH_c01980 trmB; tRNA methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D MHH_c09900 TsaA-like protein UPF0066 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] C Psudouridine synthases D MHH_c26050 truA; tRNA pseudouridine synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D MHH_c19600 truB; tRNA pseudouridine synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D MHH_c01810 truD; tRNA pseudouridine synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] C Thiolation factors D MHH_c15630 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C KEOPS/EKC complex C Elongator complex C Elongator related proteins C Other tRNA modification factors D MHH_c28670 rimN; tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D MHH_c02390 miaA; tRNA dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D MHH_c05070 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D MHH_c05480 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme B tRNA degradation factors C TRAMP complex C Rapid tRNA decay (RTD) pathway factors D MHH_c01150 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] C Other tRNA degradation factors # AProkaryotic type B 5'processing factors C Ribonucrease P D MHH_c09710 rnpA; ribonuclease P protein component RnpA K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] B 3'processing and CCA adding factors C 3'processing factors D MHH_c27530 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D MHH_c10220 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D MHH_c19060 rnb; ribonuclease II Rnb K01147 rnb; exoribonuclease II [EC:3.1.13.1] D MHH_c20760 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D MHH_c13060 putative Rna-like ribonuclease K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] C CCA adding factors D MHH_c15740 cca; multifunctional protein Cca K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B tRNA spricing factors C tRNA splicing endonucleases C tRNA splicing ligases C Other tRNA splicing factors B tRNA transport factors C tRNA export factors D MHH_c12500 putative duplicated ABC transport system - substrate-binding/ATPase protein K06020 ettA; energy-dependent translational throttle protein EttA B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D MHH_c15900 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MHH_c05240 proS; proline--tRNA ligase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] C Other AARSs D MHH_c10400 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MHH_c02840 trpS; tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D MHH_c28490 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D MHH_c10040 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D MHH_c16540 lysS; lysyl-tRNA synthetase LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D MHH_c19120 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D MHH_c01080 valS; valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D MHH_c13830 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D MHH_c15930 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D MHH_c11870 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MHH_c07170 glyQ; glycyl-tRNA synthetase alpha subunit GlyQ K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D MHH_c07210 glyS; glycyl-tRNA synthetase beta subunit GlyS K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D MHH_c26960 cysS; cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D MHH_c00880 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MHH_c21110 glnS; glutaminyl-tRNA synthetase GlnS K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D MHH_c03110 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MHH_c19420 pheS; phenylalanyl-tRNA synthetase - subunit alpha PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D MHH_c19430 pheT; phenylalanyl-tRNA synthetase - beta subunit PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D MHH_c00040 hisS; histidine--tRNA ligase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D MHH_c21030 asnS; asparaginyl-tRNA synthetase AsnS K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] C Trans-editing factors D MHH_c02330 dtd; D-tyrosyl-tRNA(Tyr) deacylase Dtd K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D MHH_c14770 yeaK; protein YeaK K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] B tRNA modification factors C Deaminases D MHH_c19630 tadA; tRNA-specific adenosine deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] C Dihydorouridine synthases D MHH_c10670 dusA; tRNA-dihydrouridine synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D MHH_c27490 dusB; tRNA-dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D MHH_c24970 dusC; tRNA-dihydrouridine synthase DusC K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] C Methylthiotransferases D MHH_c09610 miaB; isopentenyl-adenosine A37 tRNA methylthiolase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] C Methyltransferases D MHH_c23600 cmoA; tRNA (cmo5U34)-methyltransferase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D MHH_c23780 cmoB; tRNA (mo5U34)-methyltransferase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D MHH_c07300 trmA; tRNA methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D MHH_c01980 trmB; tRNA methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D MHH_c07990 trmD; tRNA methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D MHH_c05070 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D MHH_c28400 putative methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D MHH_c16330 putative LasT-like tRNA/rRNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D MHH_c10350 trmL; tRNA (cytidine/uridine-2'-O)-ribose methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D MHH_c09900 TsaA-like protein UPF0066 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D MHH_c02140 yfiC; tRNA methyltransferase YfiC K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] C Psudouridine synthases D MHH_c26050 truA; tRNA pseudouridine synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D MHH_c19600 truB; tRNA pseudouridine synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D MHH_c16010 truC; tRNA pseudouridine synthase TruC K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D MHH_c01810 truD; tRNA pseudouridine synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D MHH_c13940 rluA; 23S rRNA and tRNA pseudouridine synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D MHH_c24940 putative RluA-like tRNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] C Thiolation factors D MHH_c00080 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D MHH_c12900 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D MHH_c10580 tusA; sulfurtransferase protein TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D MHH_c21570 YedF/SirA-like protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D MHH_c03580 tusB; sulfur transfer protein complex protein TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D MHH_c03590 tusC; sulfur transfer protein complex protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D MHH_c03600 tusD; sulfur transfer protein complex protein TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D MHH_c13540 tusE; sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D MHH_c15650 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D MHH_c15630 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MHH_c10250 putative global regulator K06980 ygfZ; tRNA-modifying protein YgfZ C KEOPS/EKC complex C Other tRNA modification factors D MHH_c05480 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D MHH_c02390 miaA; tRNA dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D MHH_c16040 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D MHH_c19860 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D MHH_c26820 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D MHH_c26810 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D MHH_c26800 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D MHH_c14690 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D MHH_c02270 hypothetical protein DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D MHH_c21590 tgt; tRNA-guanine transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D MHH_c25470 thiI; tRNA sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D MHH_c05080 tilS; tRNA(Ile)-lysidine synthase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D MHH_c20100 tmcA; tRNA(Met) cytidine acetyltransferase TmcA K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D MHH_c20710 tsaB; threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D MHH_c28670 rimN; tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D MHH_c13650 tsaD; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D MHH_c26230 TsaE-like threonylcarbamoyladenosine biosynthesis protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D MHH_c12950 tcdA; tRNA threonylcarbamoyladenosine dehydratase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase B tRNA degradation factors C MHH_c00680 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] C MHH_c19660 pnp; polyribonucleotide nucleotidyltransferase Pnp K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C MHH_c10840 vapC; ribonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2022