+E Replication protein KO
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DNA Replication Proteins - Oryza sativa japonica (Japanese rice)
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AEukaryotic type
B DNA Replication Initiation Factors
C pre-RC (pre-replication complex)
D 4340349 ORC1; origin of replication complex subunit 1 K02603 ORC1; origin recognition complex subunit 1
D 4331860 ORC2; origin of replication complex subunit 2 K02604 ORC2; origin recognition complex subunit 2
D 4348571 ORC3; origin of replication complex subunit 3 K02605 ORC3; origin recognition complex subunit 3
D 4324139 ORC4; origin of replication complex subunit 4 isoform 1 K02606 ORC4; origin recognition complex subunit 4
D 4334180 ORC5; origin of replication complex subunit 1 K02607 ORC5; origin recognition complex subunit 5
D 4343985 ORC6; origin of replication complex subunit 6 K02608 ORC6; origin recognition complex subunit 6
D 4335111 CDT1-like protein A, chloroplastic K10727 CDT1; chromatin licensing and DNA replication factor 1
D 4348970 CDT1-like protein B K10727 CDT1; chromatin licensing and DNA replication factor 1
D 4324832 cell division control protein 6 homolog isoform X1 K02213 CDC6; cell division control protein 6
D 4350526 MCM2; DNA replication licensing factor MCM2 K02540 MCM2; DNA replication licensing factor MCM2 [EC:5.6.2.3]
D 4339099 MCM3; dNA replication licensing factor MCM3 K02541 MCM3; DNA replication licensing factor MCM3 [EC:5.6.2.3]
D 107275673 MCM4; DNA replication licensing factor MCM4 K02212 MCM4; DNA replication licensing factor MCM4 [EC:5.6.2.3]
D 4331016 MCM5; dNA replication licensing factor MCM5 K02209 MCM5; DNA replication licensing factor MCM5 [EC:5.6.2.3]
D 4338176 OsJ_17726; dNA replication licensing factor MCM6 K02542 MCM6; DNA replication licensing factor MCM6 [EC:5.6.2.3]
D 4352514 MCM7; DNA replication licensing factor MCM7 K02210 MCM7; DNA replication licensing factor MCM7 [EC:5.6.2.3]
C CDK (cyclin dependent kinase)
D 4352280 CYCA2-1; cyclin-A2-1 K06627 CCNA; cyclin-A
D 4324288 cyclin-A1-1 K06627 CCNA; cyclin-A
D 4352642 CYCA3-2; cyclin-A3-2 K06627 CCNA; cyclin-A
D 4333422 CYCA3-1; cyclin-A3-1 K06627 CCNA; cyclin-A
D 4324285 cyclin-A1-2 K06627 CCNA; cyclin-A
D 9268829 cyclin-A1-3 isoform X2 K06627 CCNA; cyclin-A
D 107276291 putative cyclin-F3-1 K06627 CCNA; cyclin-A
D 4338177 CYCA1-4; cyclin-A1-4 isoform 1 K06627 CCNA; cyclin-A
D 107276132 putative cyclin-F3-2 isoform X1 K06627 CCNA; cyclin-A
D 136354741 cyclin-A1-3 isoform X1 K06627 CCNA; cyclin-A
D 4328135 CDC2-2; cyclin-dependent kinase A-2 K02206 CDK2; cyclin-dependent kinase 2 [EC:2.7.11.22]
D 4331415 CDC2-1; cyclin-dependent kinase A-1 K02206 CDK2; cyclin-dependent kinase 2 [EC:2.7.11.22]
C DDK (Dbf-4 dependent kinase)
D 4349401 uncharacterized protein K02214 CDC7; cell division control protein 7 [EC:2.7.11.1]
C GINS complex
D 9268604 uncharacterized protein K10732 GINS1; GINS complex subunit 1
D 4327215 DNA replication complex GINS protein PSF2 K10733 GINS2; GINS complex subunit 2
D 4345149 DNA replication complex GINS protein PSF3 K10734 GINS3; GINS complex subunit 3
D 4337776 DNA replication complex GINS protein SLD5 K10735 GINS4; GINS complex subunit 4
C Other initiation factors
D 4332589 BRCT domain-containing protein At4g02110 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D 4344363 LOW QUALITY PROTEIN: BRCT domain-containing protein At4g02110-like K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D 4349978 uncharacterized protein K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D 4336217 ATP-dependent DNA helicase Q-like 5 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D 4349656 uncharacterized protein K06628 CDC45; cell division control protein 45
D 4351377 uncharacterized protein K06628 CDC45; cell division control protein 45
D 4339038 MCM8; probable DNA helicase MCM8 K10737 MCM8; DNA helicase MCM8 [EC:5.6.2.4]
D 4340503 MCM9; probable DNA helicase MCM9 isoform X1 K10738 MCM9; DNA helicase MCM9 [EC:5.6.2.4]
D 4347720 uncharacterized protein K10736 MCM10; minichromosome maintenance protein 10
B DNA Replication Elongation Factors
C DNA polymerase alpha / primase complex
D 4325052 DNA polymerase alpha catalytic subunit K02320 POLA1; DNA polymerase alpha subunit A [EC:2.7.7.7]
D 4351872 uncharacterized protein K02321 POLA2; DNA polymerase alpha subunit B
D 9267485 uncharacterized protein K02684 PRI1; DNA primase small subunit [EC:2.7.7.102]
D 4342990 probable DNA primase large subunit K02685 PRI2; DNA primase large subunit
C DNA polymerase epsilon complex
D 4329458 DNA polymerase epsilon catalytic subunit A K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
D 4337886 DNA polymerase epsilon subunit B K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
D 4347894 DNA polymerase II subunit B4 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
C DNA polymerase delta complex
D 4349968 OspolD1; DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
D 4331489 OJ1528D07.1; DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
D 4327080 uncharacterized protein K03504 POLD3; DNA polymerase delta subunit 3
D 4347604 P0669G04.6; uncharacterized LOC4347604 K03505 POLD4; DNA polymerase delta subunit 4
D 4344737 uncharacterized protein K03505 POLD4; DNA polymerase delta subunit 4
D 112936215 uncharacterized protein K03505 POLD4; DNA polymerase delta subunit 4
C DNA polymerase gamma complex (mitochondrial)
C RPA (replication protein A)
D 4337594 OsJ_16860; replication protein A 70 kDa DNA-binding subunit C K07466 RFA1; replication factor A1
D 4330902 OsJ_08582; replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
D 4332052 OsJ_09906; replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
D 4331236 OsJ_08977; replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
D 4330068 OsRPA32-2; replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
D 4327706 OsJ_01130; replication protein A 14 kDa subunit isoform X2 K10740 RPA3; replication factor A3
C RFC (replication factor C)
D 4350754 OsRFC1; replication factor C subunit 1 K10754 RFC1; replication factor C subunit 1
D 4351654 OsJ_35406; replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 4336704 OsRFC4; replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4
D 4330895 OsRFC3; replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 4334389 OsJ_12910; replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
D 4349480 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
C RNase H
D 4349811 ribonuclease H2 subunit A K10743 RNASEH2A; ribonuclease H2 subunit A [EC:3.1.26.4]
D 9266900 uncharacterized protein K10744 RNASEH2B; ribonuclease H2 subunit B
D 4328433 uncharacterized protein C12B10.15c K10745 RNASEH2C; ribonuclease H2 subunit C
C Other elongation factors
D 4331062 Cyclin; proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D 4336807 DNA replication ATP-dependent helicase/nuclease JHS1 isoform X1 K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
D 4339464 FEN1A; flap endonuclease 1-A K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D 4334691 FEN1B; flap endonuclease 1-B K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D 4327899 EXO-1; exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
D 4343803 uncharacterized protein isoform X1 K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 4348965 DNA ligase 1 isoform X1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D 4332326 uncharacterized LOC4332326 K26118 ATAD5; ATPase family AAA domain-containing protein 5
B DNA Replication Termination Factors
C DNA methylation enzymes
D 4342575 MET1; dNA (cytosine-5)-methyltransferase 1B isoform X2 K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D 4334435 MET1; dNA (cytosine-5)-methyltransferase 1A isoform X1 K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D 4347954 CMT3; DNA (cytosine-5)-methyltransferase CMT3 K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D 4338140 DNA (cytosine-5)-methyltransferase CMT2-like K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D 4332128 CMT1; dNA (cytosine-5)-methyltransferase CMT1 K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D 4337816 PWWP domain-containing protein 1 isoform X1 K17398 DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]
C Prevention of re-replication factors
D 4332116 OsJ_09984; cyclin-SDS-like K21777 CCNB; G2/mitotic-specific cyclin-B, other
D 4327547 CYCB1-1; cyclin-B1-1 isoform 1 K21777 CCNB; G2/mitotic-specific cyclin-B, other
D 4339185 CYCB1-5; cyclin-B1-5 K21777 CCNB; G2/mitotic-specific cyclin-B, other
D 4336670 CYCB2; cyclin-B2-1 K21777 CCNB; G2/mitotic-specific cyclin-B, other
D 4342121 CYCB2; cyclin-B2-2 K21777 CCNB; G2/mitotic-specific cyclin-B, other
D 4326914 CycB1-1; cyclin-B1-3 K21777 CCNB; G2/mitotic-specific cyclin-B, other
C Telomere proteins
D Shelterin complex
E 4340310 uncharacterized protein K11111 TERF2; telomeric repeat-binding factor 2
D TERB1-TERB2-MAJIN complex
D CST complex (animals)
E 4332917 CST complex subunit STN1 K23312 STN1; CST complex subunit STN1
D CST complex (yeast)
D RIF proteins
D SIR proteins
C Telomerase complex (animals)
D 4352024 OsTERT; telomerase reverse transcriptase K11126 TERT; telomerase reverse transcriptase [EC:2.7.7.49]
D Dyskerin complex
E 4350782 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1
E 4330603 H/ACA ribonucleoprotein complex subunit 2-like protein K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2
E 4340741 H/ACA ribonucleoprotein complex subunit 2-like protein K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2
E 9269830 H/ACA ribonucleoprotein complex subunit 3-like protein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
E 4344029 H/ACA ribonucleoprotein complex subunit 4 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
E 4332935 H/ACA ribonucleoprotein complex subunit 4 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
E 4336736 H/ACA ribonucleoprotein complex subunit 4 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
C Telomerase complex (fungi)
D 4352024 OsTERT; telomerase reverse transcriptase K11126 TERT; telomerase reverse transcriptase [EC:2.7.7.49]
D Sm core complex
E 9270807 uncharacterized protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 4329810 small nuclear ribonucleoprotein SmD1a K11087 SNRPD1; small nuclear ribonucleoprotein D1
E 4336118 small nuclear ribonucleoprotein SmD1a K11087 SNRPD1; small nuclear ribonucleoprotein D1
E 4338385 uncharacterized protein isoform X1 K11096 SNRPD2; small nuclear ribonucleoprotein D2
E 4327991 small nuclear ribonucleoprotein SmD3b K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 4332206 small nuclear ribonucleoprotein SmD3b K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 4328158 uncharacterized protein K11097 SNRPE; small nuclear ribonucleoprotein E
E 4344666 uncharacterized protein K11097 SNRPE; small nuclear ribonucleoprotein E
E 4328484 probable small nuclear ribonucleoprotein F isoform X1 K11098 SNRPF; small nuclear ribonucleoprotein F
E 4351052 probable small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 4333092 probable small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 4343870 probable small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
C ELG1-RFC complex
D 4351654 OsJ_35406; replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 4336704 OsRFC4; replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4
D 4330895 OsRFC3; replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 4334389 OsJ_12910; replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
D 4349480 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
C MRN complex
D 4337137 MRE11; double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
D 4329409 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D 4348951 NBS1; nibrin homolog K10867 NBN; nibrin
C Other termination factors
D 4326151 serine/threonine-protein kinase ATM isoform X1 K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 4337828 ATP-dependent DNA helicase Q-like SIM isoform X1 K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
D 4330923 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
D 4335888 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
D 4331279 DNA repair endonuclease UVH1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D 4343013 ADPRT-1; poly [ADP-ribose] polymerase 1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
D 4326479 ADPRT-2-A; poly [ADP-ribose] polymerase 2-A K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
D 4329546 ADPRT-3; protein ADP-ribosyltransferase PARP3 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
D 4326478 poly [ADP-ribose] polymerase 2-B isoform X1 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
D 4331462 G-patch domain-containing protein 1 K11135 PINX1; Pin2-interacting protein X1
D 4326378 RTEL1; regulator of telomere elongation helicase 1 homolog K11136 RTEL1; regulator of telomere elongation helicase 1 [EC:5.6.2.3]
D 9271042 uncharacterized protein K11137 TELO2; telomere length regulation protein
D 107280177 uncharacterized protein K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D 9267360 uncharacterized protein isoform X1 K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D 4334044 uncharacterized protein K23314 WRAP53; telomerase Cajal body protein 1
D 4324395 uncharacterized protein K25059 SDE2; replication stress response regulator SDE2
D 4340324 uncharacterized protein K25186 RTF2; replication termination factor 2
B DNA Topoisomerases
C 4344685 DNA topoisomerase 1 beta K03163 TOP1; DNA topoisomerase I [EC:5.6.2.1]
C 4330426 DNA topoisomerase 2 K03164 TOP2; DNA topoisomerase II [EC:5.6.2.2]
C 4347482 TOP3B; DNA topoisomerase 3-beta K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
C 9269718 DNA topoisomerase 3-alpha K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
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AProkaryotic type
B DNA Replication Initiation Factors
C Initiation factors (bacterial)
D 4326564 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
C Initiation factors (archaeal)
B DNA Replication Elongation Factors
C Elongation factors (bacterial)
D DNA polymerase III holoenzyme
D RNase H
D Other elongation factors
E 4337150 DNA polymerase I A, chloroplastic-like isoform X1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
E 4344789 OsJ_26226; DNA polymerase I A, chloroplastic K02335 polA; DNA polymerase I [EC:2.7.7.7]
E 4344791 DNA polymerase I B, mitochondrial isoform 1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
C Elongation factors (archaeal)
D B-family DNA polymerases
D D-family DNA polymerases
D RNase H
D RFC (replication factor C)
D Other elongation factors
E 4336807 DNA replication ATP-dependent helicase/nuclease JHS1 isoform X1 K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
E 4339464 FEN1A; flap endonuclease 1-A K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 4334691 FEN1B; flap endonuclease 1-B K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 4348965 DNA ligase 1 isoform X1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
B DNA Replication Termination Factors
C Terminus site-binding protein
C DNA methylation enzymes
C Prevention of re-replication factors
B DNA Topoisomerases
C 4334546 GYRA; probable DNA gyrase subunit A, chloroplastic/mitochondrial K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
C 4326261 GYRB; dNA gyrase subunit B, chloroplastic/mitochondrial K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C 4346606 TOP6B; DNA topoisomerase 6 subunit B K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 2, 2022