+E Transcription factors KO #

  Transcription Factors - Mixta calida

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AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D C2E16_13215 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D C2E16_12195 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D C2E16_11750 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C TCP C DMRT C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D C2E16_10160 arabinose operon transcriptional regulator AraC K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein D C2E16_10645 HTH-type transcriptional activator RhaR K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR D C2E16_10640 HTH-type transcriptional activator RhaS K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS D C2E16_18965 DNA-binding transcriptional regulator SoxS K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator D C2E16_10575 AraC family transcriptional regulator K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D C2E16_18785 AraC family transcriptional regulator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D C2E16_03900 MDR efflux pump AcrAB transcriptional activator RobA K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D C2E16_06645 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] C LysR family D C2E16_10700 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D C2E16_16825 transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D C2E16_19830 HTH-type transcriptional activator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D C2E16_19560 HTH-type transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D C2E16_03980 transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D C2E16_19950 DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D C2E16_17220 transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D C2E16_11125 HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D C2E16_13390 cbl; transcriptional regulator Cbl K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator D C2E16_08935 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator D C2E16_09365 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D C2E16_09750 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D C2E16_13395 nitrogen assimilation transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D C2E16_02500 transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon D C2E16_19875 HTH-type transcriptional regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator C DeoR family D C2E16_03875 DNA-binding transcriptional repressor DeoR K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D C2E16_01755 DeoR/GlpR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D C2E16_06070 DeoR/GlpR transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D C2E16_15265 DeoR/GlpR transcriptional regulator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator D C2E16_08780 srlR; HTH domain-containing protein K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor C LacI family D C2E16_08810 LacI family transcriptional regulator K02529 lacI; LacI family transcriptional regulator D C2E16_03455 LacI family transcriptional regulator K02529 lacI; LacI family transcriptional regulator D C2E16_14005 HTH-type transcriptional regulator GalS K02529 lacI; LacI family transcriptional regulator D C2E16_17030 HTH-type transcriptional regulator GalR K02529 lacI; LacI family transcriptional regulator D C2E16_00055 transcriptional regulator RbsR K02529 lacI; LacI family transcriptional regulator D C2E16_00815 xylose operon transcription regulator XylR K02529 lacI; LacI family transcriptional regulator D C2E16_00425 LacI family DNA-binding transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D C2E16_20025 DNA-binding transcriptional regulator CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D C2E16_02010 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D C2E16_04195 catabolite repressor/activator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D C2E16_19035 LacI family DNA-binding transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D C2E16_03210 LacI family transcriptional regulator K03487 ascG; LacI family transcriptional regulator, asc operon repressor D C2E16_05195 LacI family transcriptional regulator K03487 ascG; LacI family transcriptional regulator, asc operon repressor D C2E16_09950 HTH-type transcriptional repressor PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor D C2E16_01690 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D C2E16_07000 LacI family DNA-binding transcriptional regulator K06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator D C2E16_18720 Mal regulon transcriptional regulator MalI K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein C GntR family D C2E16_13365 phnF; phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D C2E16_12955 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D C2E16_11475 fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D C2E16_04360 pyruvate dehydrogenase complex transcriptional repressor PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D C2E16_17045 FCD domain-containing protein K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor D C2E16_18190 transcriptional regulator ExuR K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor D C2E16_00475 transcriptional regulator LldR K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator D C2E16_14740 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D C2E16_13845 GntR family transcriptional regulator K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor C TetR/AcrR family D C2E16_10055 transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D C2E16_05860 DNA-binding transcriptional repressor AcrR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D C2E16_20295 nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D C2E16_07870 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D C2E16_09980 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D C2E16_08840 TetR/AcrR family transcriptional regulator K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon D C2E16_19940 HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D C2E16_04510 TetR family transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response C Lrp/AsnC family D C2E16_00135 transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D C2E16_07480 leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D C2E16_12755 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D C2E16_08660 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D C2E16_05780 Lrp/AsnC family transcriptional regulator K05800 ybaO; Lrp/AsnC family transcriptional regulator C LuxR family D C2E16_07890 transcriptional regulator SdiA K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D C2E16_17490 LuxR family transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR D C2E16_13145 transcriptional regulator RcsA K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D C2E16_01760 HTH-type transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein C MarR family D C2E16_10005 transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D C2E16_08045 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D C2E16_16315 transcriptional repressor MprA K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D C2E16_10440 MarR family transcriptional regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility D C2E16_00940 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D C2E16_05955 HTH-type transcriptional regulator CueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D C2E16_18960 redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D C2E16_13475 MerR family DNA-binding transcriptional regulator K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator D C2E16_07090 MerR family DNA-binding transcriptional regulator K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes C Fur family D C2E16_06420 ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D C2E16_19140 transcriptional regulator Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator C IclR family D C2E16_11995 DNA-binding transcriptional regulator KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor C CRP/FNR family D C2E16_01980 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D C2E16_10735 transcriptional regulator FNR K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein C Rrf2 family D C2E16_15700 Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D C2E16_18460 HTH-type transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D C2E16_10590 transcriptional regulator K19587 oqxR; Rrf2 family transcriptional regulator, repressor of oqxAB C ArsR family D C2E16_12985 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor C XRE family D C2E16_10530 XRE family transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization C Other families D C2E16_07175 transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D C2E16_12415 MurR/RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D C2E16_02895 MurR/RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D C2E16_19430 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D C2E16_02395 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D C2E16_03885 trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D C2E16_02710 transcriptional regulator K07724 ner; Ner family transcriptional regulator D C2E16_04155 transcriptional regulator SgrR K11925 sgrR; SgrR family transcriptional regulator D C2E16_03850 multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D C2E16_13560 cupin domain-containing protein K14056 puuR; HTH-type transcriptional regulator, repressor for puuD D C2E16_03380 sigma-54-dependent transcriptional regulator K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator D C2E16_05285 nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator D C2E16_04640 CdaR family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator D C2E16_06715 molybdenum-dependent transcriptional regulator K02019 modE; molybdate transport system regulatory protein D C2E16_00925 transcriptional regulator K07726 K07726; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families D C2E16_20010 met regulon transcriptional regulator MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D C2E16_12800 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family D C2E16_14920 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator C Others D C2E16_05725 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D C2E16_19500 transcription/translation regulatory transformer protein RfaH K05785 rfaH; transcriptional antiterminator RfaH D C2E16_02545 transcriptional regulator ArgR K03402 argR; transcriptional regulator of arginine metabolism D C2E16_06380 ROK family transcriptional regulator K02565 nagC; N-acetylglucosamine repressor D C2E16_10205 ROK family transcriptional regulator K15545 mlc; transcriptional regulator of PTS gene D C2E16_00905 MltR family transcriptional regulator K02562 mtlR; mannitol operon repressor D C2E16_10905 transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D C2E16_15410 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor D C2E16_10940 phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator D C2E16_10925 envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D C2E16_03080 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein D C2E16_17385 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D C2E16_04555 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; DnaK suppressor protein D C2E16_05610 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D C2E16_05080 Crl family RNA polymerase assembly factor K11926 crl; sigma factor-binding protein Crl D C2E16_04200 transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: January 19, 2023 #
Classification taken and modified from TRANSFAC 7.0