+E	Transcription factors	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Factors - Phytophthora sojae</h2>
%<!-- w=600, -->
!
A<b>Eukaryotic type</b>
B  Basic leucine zipper (bZIP)
C    AP-1(-like) components, Jun
C    AP-1(-like) components, Fos
C    AP-1(-like) components, Maf
C    AP-1(-like) components, NF-E2
C    AP-1(-like) components, Fungal regulators
C    AP-1(-like) components, CRE-BP/ATF
C    CREB
C    C/EBP-like factors
C    bZIP/PAR
C    Plant bZIP factors
C    ZIP only
B  Basic helix-loop-helix (bHLH)
C    Ubiquitous (class A) factors
C    Myogenic transcription factors
C    Achaete-Scute
C    Tal/Twist/Atonal/Hen, Lymphoid factors
C    Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C    Tal/Twist/Atonal/Hen, HEN
C    Tal/Twist/Atonal/Hen, Mesp
C    Tal/Twist/Atonal/Hen, Atonal
C    Tal/Twist/Atonal/Hen, Pancreatic factors
C    Hairy, Hairy/E(SPL)
C    Hairy, Fungal regulators
C    Factors with PAS domain
C    Yabby
C    INO
C    HLH domain only
D      PHYSODRAFT_475454 hypothetical protein	K21626 CCNDBP1; cyclin-D1-binding protein 1 
B  Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C    Ubiquitous bHLH-ZIP factors
C    Cell cycle controlling factors, Myc
C    Cell cycle controlling factors, Mad/Max
C    Other bHLH-ZIP factors
B  Other basic domains
C    NF-1
C    RF-X
C    AP-2 (bHSH)
B  Zinc finger
C    Cys4 thyroid hormone receptor-like
C    Cys4 hepatocyte nuclear factor 4-like
C    Cys4 estrogen receptor-like
C    Cys4 nerve growth factor IB-like
C    Cys4 Fushi tarazu-F1-like
C    Cys4 germ cell nuclear factor
C    Cys4 Knirps/DAX1-like
C    Cys4 GATA-factors
D      PHYSODRAFT_301285 hypothetical protein	K10779 ATRX; transcriptional regulator ATRX 
C    Cys2His2 SP/KLF family and related proteins
C    Cys2His2 GLI-like
D      PHYSODRAFT_344278 hypothetical protein	K18487 ZIC3; zinc finger protein ZIC 3 
C    Cys2His2 Snail
C    Cys2His2 BTB-ZF factors
C    Cys2His2 BED
C    Cys2His2 PRDM
C    Cys2His2 metabolic regulators in fungi
C    Cys2His2 others
D      PHYSODRAFT_552670 hypothetical protein	K23317 MTF1; metal regulatory transcription factor 1 
D      PHYSODRAFT_558544 hypothetical protein	K23317 MTF1; metal regulatory transcription factor 1 
D      PHYSODRAFT_556228 hypothetical protein	K07466 RFA1; replication factor A1 
D      PHYSODRAFT_511885 hypothetical protein	K09228 KRAB; KRAB domain-containing zinc finger protein 
C    Cys2HisCys zinc factors
D      PHYSODRAFT_501103 hypothetical protein	K11308 MYST1; histone acetyltransferase MYST1 [EC:2.3.1.48] 
D      PHYSODRAFT_346613 hypothetical protein	K15263 LYER; cell growth-regulating nucleolar protein 
C    Cys3His zinc factors
D      PHYSODRAFT_331074 hypothetical protein	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
C    Cys2CysHis zinc factors
C    CXXC CpG-binding proteins
C    Cys6 metabolic regulators in fungi
C    Other zinc fingers
B  Helix-turn-helix
C    Homeo domain ANTP: HOXL
C    Homeo domain ANTP: NKL
C    Homeo domain Paired-related
C    Homeo domain LIM
C    Homeo domain POU
C    Homeo domain SINE
C    Homeo domain ZF
C    Homeo domain CUT
D      PHYSODRAFT_484998 hypothetical protein	K09313 CUTL; homeobox protein cut-like 
C    Homeo domain PROS
C    Homeo domain TALE
C    Homeo domain other
C    Fork head/winged helix developmental regulators
C    Fork head/winged helix tissue-specific regulators
C    Fork head/winged helix cell cycle-controlling factors, E2F
D      PHYSODRAFT_313263 hypothetical protein	K06620 E2F3; transcription factor E2F3 
D      PHYSODRAFT_523918 hypothetical protein	K09391 E2F7_8; transcription factor E2F7/8 
C    Fork head/winged helix cell cycle-controlling factors, DP
D      PHYSODRAFT_560046 hypothetical protein	K04683 TFDP1; transcription factor Dp-1 
C    Fork head/winged helix other regulators
C    Heat shock factors
D      PHYSODRAFT_566381 hypothetical protein	K09414 HSF1; heat shock transcription factor 1 
D      PHYSODRAFT_485031 hypothetical protein	K09419 HSFF; heat shock transcription factor, other eukaryote 
C    Tryptophan clusters Myb, Myb-factors
D      PHYSODRAFT_548007 hypothetical protein	K09420 MYB; transcriptional activator Myb 
D      PHYSODRAFT_343494 hypothetical protein	K09420 MYB; transcriptional activator Myb 
C    Tryptophan clusters Myb, Myb-like factors
C    Tryptophan clusters Ets-type
C    Tryptophan clusters interferon-regulating factors
C    TEA domain
C    ARID
B  beta-Scaffold factors with minor groove contacts
C    RHR (Rel homology region) Rel/Ankyrin
C    RHR (Rel homology region) Ankyrin only
C    RHR (Rel homology region) NF-AT
C    STAT
C    p53
C    MADS-box regulators of differentiation, MEF-2
C    MADS-box regulators of differentiation, Homeotic genes
C    MADS-box regulators of differentiation, Yeast regulators
C    MADS-box responders to external signals
C    SAND domain-containing proteins
C    TATA-binding proteins
D      PHYSODRAFT_522103 hypothetical protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
D      PHYSODRAFT_484921 hypothetical protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
D      PHYSODRAFT_345098 hypothetical protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
C    HMG SOX
C    HMG TCF-1
C    HMG2-related
D      PHYSODRAFT_348389 hypothetical protein	K09272 SSRP1; FACT complex subunit SSRP1/POB3 
C    UBF
D      PHYSODRAFT_300810 hypothetical protein	K09273 UBTF; upstream-binding transcription factor 
C    Other HMG box factors
C    Heteromeric CCAAT factors
D      PHYSODRAFT_285933 hypothetical protein	K08064 NFYA; nuclear transcription factor Y, alpha 
D      PHYSODRAFT_285923 hypothetical protein	K08064 NFYA; nuclear transcription factor Y, alpha 
D      PHYSODRAFT_476521 hypothetical protein	K08065 NFYB; nuclear transcription Y subunit beta 
D      PHYSODRAFT_367869 hypothetical protein	K08065 NFYB; nuclear transcription Y subunit beta 
D      PHYSODRAFT_296248 hypothetical protein	K08066 NFYC; nuclear transcription factor Y, gamma 
C    Grainyhead
C    Cold-shock domain factors, DbpA-like
C    Cold-shock domain factors, YB-1/DbpB-like
C    Cold-shock domain factors, FRG Y2-like
C    Runt
C    MYRF
B  Other transcription factors
C    HMGI(Y)
C    NUPR
E        Line #4
C    Pocket domain Rb
D      PHYSODRAFT_354183 hypothetical protein	K06618 RB1; retinoblastoma-associated protein 
C    Pocket domain CBP
D      PHYSODRAFT_483048 hypothetical protein	K04498 EP300; E1A/CREB-binding protein [EC:2.3.1.48] 
D      PHYSODRAFT_491564 hypothetical protein	K04498 EP300; E1A/CREB-binding protein [EC:2.3.1.48] 
D      PHYSODRAFT_460736 hypothetical protein	K04498 EP300; E1A/CREB-binding protein [EC:2.3.1.48] 
C    T-box
C    TCP
C    DMRT
C    AP2/ERF
C    WRKY
C    LOB
C    Copper-fist proteins fungal regulators
C    Others
D      PHYSODRAFT_505751 hypothetical protein	K21596 CAMTA; calmodulin-binding transcription activator 
D      PHYSODRAFT_356182 hypothetical protein	K22145 TMEM18; transmembrane protein 18 
#
A<b>Prokaryotic type</b>
B  Helix-turn-helix
C    AraC family
C    LysR family
C    DeoR family
C    LacI family
C    GntR family
C    TetR/AcrR family
C    Lrp/AsnC family
C    LuxR family
C    MarR family
C    MerR family
C    Fur family
C    IclR family
C    CRP/FNR family
C    Rrf2 family
C    ArsR family
C    XRE family
C    Other families
B  Ribbon-helix-helix
C    CopG family
C    Other families
B  Other transcription factors
C    BglG family
C    Others
!
#<hr>
#[ <a href="/kegg/brite.html">BRITE</a> | <a href="/kegg/kegg2.html">KEGG2</a> | <a href="/kegg/">KEGG</a> ]<br>
#Last updated: February 8, 2023
#<br>Classification taken and modified from <a href="http://www.gene-regulation.com/pub/databases.html#transfac">TRANSFAC 7.0</a>